European honey bee (Apis mellifera) is major pollinator for agriculture and vital for food production. Large number of viruses infecting A. mellifera have been discovered over the years, but it isn't yet known if they are pathogenic for their host. However, presence of non-viral pathogens like Varroa destructor can greatly increase their virulence and have fatal consequences for the colony. The aim of this study was to test and verify robustness of the method for virome detection on healthy honey bees from the Czech Republic. Last but not least we aimed to detect non-viral parasites and correlate their presence with detected viruses. We have successfully identified large number of viral sequences from different viral families. Viral composition was found to be influenced mainly by colony from where the honey bees were collected. That was mainly given by a large amount of bacteriophages in the samples. However, analysis of individual viruses, known to infect honey bee, indicated that viral prevalence and viral loads of specific viruses is quite different among individual honey bees from the same colony. Interestingly we were able to find highly diverse Lake Sinai viruses. We were able to observe correlations either between individual viruses or viral other non-viral pathogens. Further analysis is...

L'isthme de Panama se situe en bordure SW de la plaque Caraïbe, à la jonction de trois plaques lithosphériques: les plaques Amérique du Sud, Nazca et Cocos. Cet isthme est constitué de deux arcs volcaniques formant l'Amérique Centrale. Leurs présences reflètent une histoire complexe de convergence, en subduction. L'événement majeur de cette région correspond à la collision de l'Amérique Centrale contre l'Amérique du Sud entre 12-25 Ma. L'objectif de cette thèse est de documenter les déformations avant, pendant et après le processus d'accrétion continentale. Le but est de mieux comprendre comment un arc volcanique s'accrète sur une marge continentale pour reconstruire l'histoire géodynamique de cette région de 70 Ma jusqu'à nos jours. Cette thèse combine: - une étude sédimentologique et paléontologique, - une étude structurale à partir de données spatiales, géophysiques, et de terrain, - une étude thermochronologique (AFT), - et une étude interprétative sismique. Je propose ainsi une accrétion progressive et oblique de l'Amérique Centrale sur l'Amérique du Sud, s'initiant au sud de la région d'Istmina à partir de 40-37 Ma. La plaque Caraïbe, piégée entre l'arc volcanique et la marge continentale sud-américaine, disparaît progressivement sous l'Amérique du Sud. Vers 15 Ma, l'accrétion de l'arc dans la partie colombienne se termine. Au Panama, la convergence continentale se poursuit, mais le système s'inverse. Une nouvelle subduction s'initie : la plaque Caraïbe subducte sous l'isthme. Les déformations compressives engendrées par l'accrétion contrôlent la migration des masses sédimentaires et permettent la surrection progressive de l'isthme créant le pont inter-Amériques. / The Panama Isthmus is located on the SW boundary of the Caribbean plate, at the junction of the South American, Nazca and Cocos plates. The isthmus is composed of two island arcs forming Central America. It formed by a complex history of plate subductions. The major tectonic event in this region is attributed to the accretion of Central America with South America between 12 and 25 Ma. The aim of this thesis is to document the deformation before, during and after the accretionary continental process. The main purpose is to better understand how a volcanic arc collides against a continental margin in order to reconstruct the tectonic history of this region since 70 Ma until today. This thesis combines: - a sedimentological and paleontological studies, - a structural study from spatial, geophysical and field work data, - a thermochronological study (AFT), - and an interpretative seismic study. I propose the initiation of progressive and oblique arc-continent collision during 40-37 Ma. The Caribbean plate, trapped between the arc and the continent, progressively disappeared beneath the South American continent. Around 15 Ma, the Colombian part of Central America was accreted and the convergence of Panama toward the continent progressed and produced a new subduction zone whereby the Caribbean plate subducted beneath the Panama Isthmus. Compressive deformations, caused by the collision, still actively control the migration of sedimentary masses, allowing the progressive emergence of the isthmus and forming the inter-American land bridge.

<p>The main result in this thesis is the generalisation of Bergman's diamond lemma for ring theory to power series rings. This generalisation makes it possible to treat problems in which there arise infinite descending chains. Several results in the literature are shown to be special cases of this diamond lemma and examples are given of interesting problems which could not previously be treated. One of these examples provides a general construction of a normed skew field in which a custom commutation relation holds.</p><p>There is also a general result on the structure of totally ordered semigroups, demonstrating that all semigroups with an archimedean element has a (up to a scaling factor) unique order-preserving homomorphism to the real numbers. This helps analyse the concept of filtered structure. It is shown that whereas filtered structures can be used to induce pretty much any zero-dimensional linear topology, a real-valued norm suffices for the definition of those topologies that have a reasonable relation to the multiplication operation.</p><p>The thesis also contains elementary results on degree (as of polynomials) functions, norms on algebras (in particular ultranorms), (Birkhoff) orthogonality in modules, and construction of semigroup partial orders from ditto quasiorders.</p>

The main result in this thesis is the generalisation of Bergman's diamond lemma for ring theory to power series rings. This generalisation makes it possible to treat problems in which there arise infinite descending chains. Several results in the literature are shown to be special cases of this diamond lemma and examples are given of interesting problems which could not previously be treated. One of these examples provides a general construction of a normed skew field in which a custom commutation relation holds. There is also a general result on the structure of totally ordered semigroups, demonstrating that all semigroups with an archimedean element has a (up to a scaling factor) unique order-preserving homomorphism to the real numbers. This helps analyse the concept of filtered structure. It is shown that whereas filtered structures can be used to induce pretty much any zero-dimensional linear topology, a real-valued norm suffices for the definition of those topologies that have a reasonable relation to the multiplication operation. The thesis also contains elementary results on degree (as of polynomials) functions, norms on algebras (in particular ultranorms), (Birkhoff) orthogonality in modules, and construction of semigroup partial orders from ditto quasiorders.

The structural properties of the very neutron deficient systems around N~Z~40 have been studied in two experiments performed at the GANIL and Legnaro laboratories. The fragmentation of a 60 MeV/u92 Mo beam on a natural nickel target at the GANIL Laboratory, France, produced exotic nuclei along the proton drip line in the mass 80 region. Isomeric decays have been observed for the first time in the N=Z+2 systems 74 36Kr, 80 39Y and 84 41Nb. The isomer in 74 Kr is interpreted as the hindered decay from an excited 0+ state, supporting the long-standing prediction of prolate/oblate shape coexistence in this nucleus. Transitions from states below an isomer in the N=Z nucleus 86 43Tc have also been tentatively identified, making this the heaviest N=Z system for which gamma-ray decays from excited states have been observed. Conclusive evidence for the existence of the Z=N+1 isotopes 77 39Y, 79 40Zr and 83 42Mo has also been obtained together with upper limits on the particle decay lifetimes of the odd-proton systems 81 41 Nb and 85 43Tc. The reported instability of the lighter odd-Z, Tz = -1/2 systems 69Br and 73Rb makes the observed existence for 77 39Y particularly interesting. A possible explanation for the relative particle stability of 77 39Y is given in terms of the shape polarising effect of the N=Z=38 prolate shell gap on the nuclear mean field and the increased centrifugal barrier associated with the occupation of a g9/2 proton orbital. The second experiment was performed to further investigate the oblate nature of the isomeric state in 74Kr. The reaction 40Ca(40Ca, alpha2p)74Kr was used at a beam energy of 135 MeV obtained from the Tandem XTU accelerator. The EUROBALL gamma-ray array was used in conjunction with the ISIS charged particle silicon ball to study the states above and below the isomer. The ISIS ball was used to highlight channel selection of non-yrast states by particle gating. No evidence for the 0+2 isomer in 74Kr was observed in this work.

Nous présentons une approche alternative aux diagonalisations exactes de calculs en modèles en couches pour l'étude microscopique de la structure nucléaire. Nous avons tout d'abord minimisé l'énergie totale du système par la résolution des équations Hartree-Fock dans la base définie par l'espace de valence du modèle en couches. Nous avons finalisé la mise au point de ce programme par comparaison des résultats avec les solutions de problèmes solubles analytiquement comme ceux d'un hamiltonien SU(3) ou par comparaison avec des diagonalisations exactes du modèle en couches. Ensuite, nous avons mis au point des procédures pour l'obtention de ces mêmes calculs avec contraintes pour une description complète de la surface d'énergie potentielle d'un noyau donné en fonction des degrés de liberté Q20 et Q22. La restauration du moment angulaire par méthode de projections a permis d'obtenir les spectres des noyaux rotationnels dans le cas axial et dans le cas triaxial. Enfin, la méthode des coordonnées génératrices a permis le mélange de ces déterminants de Slater non orthogonaux. Parmi les différentes applications, nous avons pu décrire les noyaux déformés le long de la ligne N=Z autour du80Zr ou un nouvel îlot d'inversion à N=50. / We present an alternative approach to shell diagonalizations for microscopic description of nuclear structure. First we minimized the total system energy solving the Hartree-Fock equations within the shell model valence space. The results are compared with exact shell model diagonalization and an exact soluble SU(3) hamiltonian. Then, we developed procedures to obtain the same of type calculations with constrained conditions on the quadrupole degrees of freedom to obtain the full potential energy surfaces. The angular momentum restauration was obtained through projection method to generate rotionnal spectra of nuclei in both axial and triaxial cases. Finally the generate coordinate method was applied to mix several of these non-orthogonal Slater determinants. Among several applications we managed to describe deformed nuclei along the N=Z line around 80Zr or a new island of deformation at N=50. Finally, a first application in the superheavy region predicts a spherical gap for the Z=114, N=184 isotope

In this study, the possibility of using low pressure hydrogenated steam to simulate primary water reactor conditions is examined. The oxides formed on Alloy 600 (WF675) between 350 Celsius and 500 Celsius in low pressure hydrogenated steam (with a ratio of oxygen at the Ni/NiO to oxygen in the system of 20) have been characterised using analytical electron microscopy (AEM) and compared to oxide that formed in a high pressure water in a autoclave at 350 Celsius with 30 cc/kg of hydrogen. Preferential oxidation of grain boundaries and bulk internal oxidation were observed on samples prepared by oxide polishing suspension (OPS). Conversely, samples mechanically ground to 600 grit produced a continuous, protective oxide film which suppressed the preferential and internal oxidation. The surface preparation changed the form of the oxides in both steam and autoclave tests. The preferential oxidation rate has been determined to be K_{oxide} = Aexp{-Q/RT}with A = 2.27×10^(−3) m^(2)s^(−1) and Q = 221 kJ.mol^(−1) (activation energy) for WF675 and A = 5.04 × 10^(−7) m^(2)s^(−1) and Q = 171 kJ.mol^(−1) for 15% cold worked WF675. These values are consistent with the activation energy of primary water stress corrosion cracking (PWSCC) initiation. Bulk oxygen diffusivities were calculated from the internal oxidation after 500 h exposures. At 500 Celsius the oxygen diffusivity was determined to be 1.79×10^(−20) m^(2)s^(−1) for WF675 and 1.21×10^(−20) m^(2)s^(−1) for 15% cold worked WF675, the oxygen diffusivity at 400 Celsius in 15% cold worked WF675 was calculated to be 1.49×10^(−22) m^(2)s^(−1).The Cr-depletion associated with preferential oxidation has been assessed by AEM. The Cr-depletion was asymmetric and it could not be accounted for by local variations in the diffusion rate. Chemically induced grain boundary migration is suggested as a possible explanation. Constant load SCC tests conducted in hydrogenated steam at 400 Celsius have shown a similar trend to the classical dependency of PWSCC as a function of potential. The SCC samples were also prepared with two surface finishes, OPS and 600 grit. In all SCC tests, significantly more cracking was observed on the OPS surface and all failures initiated from this surface.

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Le contexte de cette thèse est la théorie de l'élasticité non linéaire, appelée également "élasticité finie". On y présente des résultats concernant la propagation d'ondes d'amplitude finie dans des matériaux élastiques non linéaires soumis à une grande déformation statique homogène. Bien que les matériaux considérés soient isotropes, lors de la propagation d'ondes un comportement anisotrope dû à la déformation statique se manifeste. <p><p>Après un rappel des équations de base de l'élasticité non linéaire (Chapitre 1), on considère tout d'abord la classe générale des matériaux incompressibles. Pour ces matériaux, on montre que la propagation d'ondes transversales polarisées linéairement est possible pour des choix appropriés des directions de polarisation et de propagation. De plus, on propose des généralisations des modèles classiques de "Mooney-Rivlin" et "néo-Hookéen" qui conduisent à de nouvelles solutions. Bien que le contexte soit tri-dimensionnel, il s'avère que toutes ces ondes sont régies par des équations d'ondes scalaires non linéaires uni-dimensionelles. Dans le cas de solutions du type ondes simples, on met en évidence une propriété remarquable du flux et de la densité d'énergie. <p><p>Dans les Chapitres 3 et 4, on se limite à un modèle particulier de matériaux compressibles appelé "modèle restreint de Blatz-Ko", qui est une version compressible du modèle néo-Hookéen. <p><p>En milieu infini (Chapitre 3), on montre que des ondes transversales polarisées linéairement, faisant intervenir deux variables spatiales, peuvent se propager. Bien que la théorie soit non linéaire, le champ de déplacement de ces ondes est régi par une version anisotrope de l'équation d'onde bi-dimensionnelle classique. En particulier, on présente des solutions à symétrie "cylindrique elliptique" analogues aux ondes cylindriques. Comme cas particulier, on obtient aussi des ondes planes inhomogènes atténuées à la fois dans l'espace et dans le temps. De plus, on montre que diverses superpositions appropriées de solutions sont possibles. Dans chaque cas, on étudie les propriétés du flux et de la densité d'énergie. En particulier, dans le cas de superpositions il s'avère que des termes d'interactions interviennent dans les expressions de la densité et du flux d'énergie. <p><p>Finalement (Chapitre 4), on présente une solution exacte qui constitue une généralisation non linéaire de l'onde de Love classique. On considère ici un espace semi-infini, appelé "substrat" recouvert par une couche. Le substrat et la couche sont constitués de deux matériaux restreints de Blatz-Ko pré-déformés. L'onde non linéaire de Love est constituée d'un mouvement non atténué dans la couche et d'une onde plane inhomogène dans le substrat, choisies de manière à satisfaire aux conditions aux limites. La relation de dispersion qui en résulte est analysée en détail. On présente de plus des propriétés générales du flux et de la densité d'énergie dans le substrat et dans la couche. <p><p><p>The context of this thesis is the non linear elasticity theory, also called "finite elasticity".<p>Results are obtained for finite-amplitude waves in non linear elastic materials which are first subjected to a large homogeneous static deformation. Although the materials are assumed to be isotropic, anisotropic behaviour for wave propagation is induced by the static deformation. <p><p>After recalling the basic equations of the non linear elasticity theory (Chapter 1), we first consider general incompressible materials. For such materials, linearly polarized transverse plane waves solutions are obtained for adequate choices of the polarization and propagation directions (Chapter 2). Also, extensions of the classical Mooney-Rivlin and neo-Hookean models are introduced, for which more solutions are obtained. Although we use the full three dimensional elasticity theory, it turns out that all these waves are governed by scalar one-dimensional non linear wave equations. In the case of simple wave solutions of these equations, a remarkable property of the energy flux and energy density is exhibited.<p><p>In Chapter 3 and 4, a special model of compressible material is considered: the special Blatz-Ko model, which is a compressible counterpart of the incompressible neo-Hookean model. <p><p>In unbounded media (Chapter 3), linearly polarized two-dimensional transverse waves are obtained. Although the theory is non linear, the displacement field of these waves is governed by a linear equation which may be seen as an anisotropic version of the classical two-dimensional wave equation. In particular, solutions analogous to cylindrical waves, but with an "elliptic cylindrical symmetry" are presented. Special solutions representing "damped inhomogeneous plane waves" are also derived: such waves are attenuated both in space and time. Moreover, various appropriate superpositions of solutions are shown to be possible. In each case, the properties of the energy density and the energy flux are investigated. In particular, in the case of superpositions, it is seen that interaction terms enter the expressions for the energy density and the energy flux. <p><p>Finally (Chapter 4), an exact finite-amplitude Love wave solution is presented. Here, an half-space, called "substrate", is assumed to be covered by a layer, both made of different prestrained special Blatz-Ko materials. The Love surface wave solution consists of an unattenuated wave motion in the layer and an inhomogeneous plane wave in the substrate, which are combined to satisfy the exact boundary conditions. A dispersion relation is obtained and analysed. General properties of the energy flux and the energy density in the substrate and the layer are exhibited. <p><p><p><p><p> / Doctorat en Sciences / info:eu-repo/semantics/nonPublished

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