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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
11

Le rôle des protéines courbant les membranes dans l’endocytose indépendante de la clathrine suivie par le récepteur de l’interleukine 2 / The role of membrane-bending proteins in clathrin-independent endocytosis used by the interleukin 2 receptor

Bertot, Laëtitia 15 December 2016 (has links)
L’endocytose permet l’internalisation d’éléments présents dans le milieu extracellulaire tels que les nutriments. Ce processus prend place dans la membrane plasmique. Les courbures de la membrane jouent un rôle essentiel dans l’endocytose pour générer une invagination initiale, un puits, puis une vésicule qui se sépare ensuite de la membrane plasmique pour fusionner avec les compartiments intracellulaires. Il existe plusieurs voies d’endocytose qui peuvent être classées selon des critères tels que la taille des vésicules produites, la médiation par un récepteur ou la présence d’un manteau recouvrant les vésicules. La voie d’endocytose la mieux caractérisée est celle dépendante de la clathrine. Mon laboratoire d’accueil travaille sur l’entrée du récepteur de l’interleukine 2 (IL-2R). Ce récepteur peut entrer de façon constitutive ou induite en présence de son ligand l’IL-2. Les deux voies sont indépendantes de la clathrine. Lors de mon arrivée dans le laboratoire, ces voies étaient encore peu caractérisées, notamment les facteurs induisant les courbures membranaires restaient à identifier. Ces facteurs doivent être particulièrement impliqués car les vésicules contenant l’IL-2R sont dépourvues de manteaux. Un crible par interférence à ARN, réalisé avant mon arrivée avait permis de proposer des protéines candidates pouvant courber les membranes. La première partie de ma thèse a consisté à confirmer l’importance de certaines protéines issues de ce crible puis à étudier leurs rôles dans la voie constitutive de l’IL-2R. Parmi ces protéines confirmées, deux familles de facteurs étaient particulièrement intéressantes pour leur capacité à courber les membranes, les phospholipases D et les endophilines. Ces dernières ont permis d’identifier une nouvelle voie d’entrée nommée « Fast Endophilin Mediated Endocytosis » FEME dans laquelle l’endophiline joue un rôle essentiel et qui est empruntée par de nombreux récepteurs transmettant le signal. La voie FEME partage plusieurs facteurs communs avec la voie d’endocytose induite de l’IL-2R. Pour finir, mes travaux de thèse ont porté sur l’orchestration de l’endophiline et de la dynamine dans la voie d’endocytose constitutive de l’IL-2R. Ces deux facteurs sont impliqués en fin d’endocytose, pour scinder les vésicules de la membrane plasmique. Cependant, ces deux protéines n’ont pas la même orchestration. Nos travaux montrent une action distincte de l’endophiline et de la dynamine dans les voies d’endocytose dépendante et indépendante de la clathrine. / Endocytosis allows the uptake of elements from the extracellular fluid such as nutriments. This process takes place at the plasma membrane. The membrane curvatures play an important role in endocytosis for the production of initial invagination to form a pit that will be then separate from the plasma membrane and will go to the intracellular compartments. Several routes of endocytosis exist and can be classified depending on vesicles size formed, receptor mediated endocytosis or coat on vesicles. The well-known characterized endocytosis pathway is the clathrin mediated one. My lab is working on interleukin 2 receptor (IL-2R) entry. This receptor can enter either constitutively or upon induction by the ligand IL-2. Both uptake pathways are independent of clathrin. When I arrived in the lab, those pathways were still under characterization, in particular the factors inducing the membrane curvature. Their role should be important since IL-2R containing vesicles are coated free. A small interfering RNA screen performed before my phD, allowed to identify new candidates. The first part of my thesis was to verify the involvement of some of them in the IL-2R constitutive pathway and then to study their role in this pathway. Among them, 2 families of proteins were particularly interesting as they can curve membranes, phospholipases D and endophilins. The endophilin allowed the discovery of a new route called “Fast Endophilin Mediated Endocytosis” (FEME) in which it plays an essential role and which is used by numerous receptors that transmit signal. The FEME pathway shares several factors that are common with the IL-2 induced endocytosis pathway. Then, I conducted a work on the orchestration of endophilin and dynamin during the constitutive IL-2R endocytosis. Both factors are recruited at the end of the mechanism, to separate the vesicles from the plasma membrane. However, both proteins do not have the same orchestration. Our works show a distinct action of endophilin and dynamin in clathrin dependent and independent endocytosis.
12

Investigating the Functional Role of Drp1 in Mitochondrial Fission

Francy, Christopher Alfred 08 February 2017 (has links)
No description available.
13

Endozytose der inneren Haarzelle / Endocytosis of inner hair cells

Lenz, Christine 13 December 2011 (has links)
No description available.
14

Rôle de la Dynamique Membranaire dans la Mise en Place des Mécanismes de Défense chez le Tabac

Stanislas, Thomas 13 May 2011 (has links)
La cryptogéine, une protéine sécrétée par l’oomycète Phytophthora cryptogea, provoque la mise en place de mécanismes de défense chez le tabac, mobilisant au cours des étapes précoces de la signalisation associée, des protéines localisées dans la membrane plasmique (MP). Une fraction membranaire résistante à la solubilisation par les détergents (DIM pour Detergent Insoluble Membrane), enrichie en stérols et en sphingolipides avait été purifiée à partir de la MP de tabac : cette fraction contenait plusieurs protéines impliquées dans la cascade de signalisation induite par la cryptogéine. Chez l’animal, l’association dynamique de protéines à des microdomaines riches en stérols et sphingolipides en réponse à un stress biotique joue un rôle essentiel dans la régulation de la signalisation cellulaire. L’objectif de ce travail était de tester l’hypothèse qu’un tel phénomène puisse se produire dans notre modèle d’étude. La comparaison du protéome de fractions DIMs, purifiées à partir de cellules traitées ou non pendant 5 minutes à la cryptogéine a été réalisée à l’aide d’un marquage isotopique (15N ou 14N) et d’une approche de protéomique quantitative. Le premier résultat est que l’abondance de la majorité des protéines n’est pas modifiée dans les DIMs en réponse à la cryptogéine. Une seule protéine est enrichie dans les DIMs, une isoforme de 14-3-3, tandis que quatre dynamines (DRPs pour Dynamin Related Proteins), impliquées dans le trafic vésiculaire, sont exclues des DIMs en réponse à la cryptogéine. L’étude d’une des dynamines identifiées, DRP1A, a été menée. Nous avons caractérisé les différents gènes codant DRP1A dans le génome du tabac, puis utilisé une approche ARN antisens pour altérer l’expression de cette protéine et nous avons étudié sa localisation subcellulaire à l’aide d’anticorps spécifiques et en observant en microscopie confocale cette protéine fusionnée à la GFP. Cette approche a permis de confirmer la présence de DRP1A dans la fraction DIMs et la diminution transitoire de son association à cette fraction en réponse à la cryptogéine, suite à une dissociation de la fraction membranaire. Ces travaux constituent la première mise en évidence d’une association/dissociation dynamique de protéines aux DIMs de plantes en réponse à un stimulus biologique / Cryptogein, a protein secreted by the oomycete Phytophthora cryptogea, induces defense mechanisms in tobacco. Several proteins involved in the associated signaling pathway were identified and localized on the plasma membrane (PM). A fraction resistant to solubilization by detergent named DIMs for Detergent Insoluble Membranes, enriched in sterols an sphigolipids had been isolated from tobacco PM. It was proved to contain proteins previously identified as actors of the signaling cascade triggered by cryptogein. In animal cells, the dynamic association of proteins to sterol and sphingolipid rich microdomains under the influence of a biological stimulus plays an essential role in the regulation of cellular signaling. The purpose of this work was to test the hypothesis that such a phenomenon might occur in our model. The comparison using isotopic labeling (15N or 14N) and quantitative proteomics, of the composition of DIMs extracted from tobacco cells treated or not by cryptogein, revealed that, although the association to DIMs of most proteins remained unchanged, five proteins had their relative abundance modified after 5 minutes of treatment. One of these was a signaling protein (a 14-3-3 protein) and the four others were related to cell trafficking (4 DRPs, Dynamin Related Proteins). We characterized the DRP1A gene family in tobacco, and set up an antisens RNA antisense to down-regulate the expression of this protein. We studied the intracellular localization of DRP1 using specific antibodies and a GFP fusion. The results confirmed the presence of DRP1 in DIMs and its depletion from this fraction upon cryptogein treatment, through a dissociation from the PM. This is the first evidence of a dynamic association/dissociation of proteins to microdomains in plants upon a biological stimulus
15

Skeletal muscle regeneration in DNM2-related centronuclear myopathy / Regeneração muscular na miopatia centronuclear associada a mutações no gene DNM2

Almeida, Camila de Freitas 11 June 2019 (has links)
The skeletal muscle has a remarkable regenerative capacity upon injury, due to the presence of the satellite cells, which remain quiescent in the tissue, but, when required, they are able to proliferate and form and/or repair myofibers. Moreover, satellite cells are important to muscle growth and maintenance. However, in many neuromuscular disorders, the amount, function, and proliferative capacity of these cells are impaired. Centronuclear myopathies (CNM) are a group of muscle diseases characterized by generalized muscle weakness and myofibers with central nuclei. The autosomal dominant form (AD-CNM) is caused by mutations in the DNM2 gene. Dynamin 2 protein is ubiquitously expressed and is involved in membrane remodeling, intracellular trafficking, and cytoskeleton dynamics. Therefore, the pathophysiological mechanisms are equally diverse e not completely understood, mainly the fact to be a muscle-specific disease. In the present Ph.D. thesis, we sought to investigate the satellite cells in the context of centronuclear myopathy. For this, we used the mouse model KI-Dnm2R465W, bearing the most frequent mutation found in human patients. Since in centronuclear myopathy there is no evident degenerative process ongoing, we induced muscle lesion by electrical shock, a protocol developed for this thesis, comparatively to cardiotoxin injection. We verified that the number of satellite cells in gastrocnemius muscle is reduced in the KI-Dnm2R465W mouse in relation to wild-type animals. As a result, the regenerative potential of the mutant mouse is decreased and the muscle is not able to fully recover. In addition, we investigated the functional consequences of two mutations, p.R465W and p.E650K, in immortalized myoblasts. We examined the myogenic potential in vitro, the migratory property, and the endocytosis capacity. We found that both mutations impact on the myogenic potential, but in different ways. We also show that both mutations impair the migratory capacity of myoblasts that justify, in parts, the alterations in their myogenic potential. Finally, we verified that the endocytosis capacity is affected in a mutation-dependent manner, which may also indirectly disturb the myogenic differentiation efficiency / O músculo esquelético possui grande capacidade regenerativa após sofrer lesões, por causa da presença das chamadas células-satélite, que permanecem no tecido em estado quiescente, mas que, na presença de uma lesão, são capazes de proliferar e formar e/ou reparar miofibras. As células-satélite são importantes para o crescimento e manutenção do músculo adulto. Porém, em diversas doenças neuromusculares, a quantidade, a função e a capacidade proliferativa destas células podem estar comprometidas. As miopatias centronucleares (CNM) são um grupo de doenças musculares caracterizadas por fraqueza muscular generalizada e o posicionamento dos núcleos na porção central da miofibra. A forma autossômica dominante (AD-CNM) é causada por mutações no gene DNM2. A proteína dinamina 2 é expressa ubiquamente e está envolvida no remodelamento de membranas, no tráfego intracelular e na dinâmica do citoesqueleto. Consequentemente, os mecanismos fisiopatológicos também são diversos e não completamente compreendidos, principalmente o fato de ser uma doença músculo-específica. Nesta tese de doutorado, buscamos investigar as células-satélite no contexto da miopatia centronuclear. Para isto, utilizamos o camundongo modelo KI-Dnm2R465W, portador da mutação mais frequente em pacientes humanos. Como na miopatia centronuclear não há um processo degenerativo em atividade, induzimos nos camundongos a lesão muscular por choque elétrico, em protocolo desenvolvido nesta tese, comparativamente a injeção de cardiotoxina. Verificamos que o número de células satélite no músculo gastrocnêmio do camundongo KI-Dnm2R465W é reduzido em relação aos animais selvagens. Em consequência disto, o potencial regenerativo do animal mutante é reduzido e o músculo não se recupera completamente. Investigamos também os efeitos funcionais de duas mutações, p.R465W e p.E650K, em mioblastos imortalizados. Examinamos o potencial miogênico in vitro, a propriedade migratória e a capacidade de endocitose. Verificamos que o potencial miogênico destas células é afetado pelas mutações, porém de maneiras distintas. Mostramos também que ambas as mutações impactam negativamente na capacidade migratória dos mioblastos, o que em parte justifica as alterações no potencial miogênico dos mesmos. Por fim, verificamos que a capacidade endocítica em mioblastos é alterada a depender da mutação, o que indiretamente também pode afetar a capacidade de diferenciação miogênica
16

Mécanismes de formation et de fermeture des phagosomes dans les macrophages / Mechanisms of formation and closure of phagosomes in macrophages

Marie-Anaïs, Florence 27 September 2016 (has links)
La phagocytose est un mécanisme cellulaire essentiel de l’organisme. Elle joue un rôle à la fois dans le maintien de l’homéostasie tissulaire mais également dans le système immunitaire. Ce processus, réalisé par des cellules phagocytaires, telles que les cellules dendritiques, les polymorphonucléaires neutrophiles ou les macrophages, permet l’ingestion et l’élimination quotidienne de particules de grandes tailles (>0,5 µm) : bactéries, champignons ou débris cellulaires. Il est induit par de nombreux récepteurs phagocytaires tels que les récepteurs aux fragments cristallisables des immunoglobulines (FcR) et les récepteurs au complément (CR3). Ceux-ci induisent des cascades de signalisation différentes mais aboutissant, toutes deux, à un remodelage du cytosquelette d’actine et de la membrane plasmique. Il y alors formation d’une coupe phagocytaire entourant et enfermant la particule à internaliser dans un compartiment clos appelé phagosome. Alors que de nombreuses études ont permis de disséquer l’organisation des coupes phagocytaires induites par les FcR, le mécanisme de fermeture des phagosomes n’était pas élucidé. Par ailleurs, les mécanismes moléculaires impliqués dans la formation des phagosomes suite à l’engagement des CR3 sont moins bien décrits. Au cours de ce travail, nous avons analysé le rôle de la dynamine 2, une GTPase impliquée dans les mécanismes de fission des vésicules d’endocytose, au cours de la formation et de la fermeture des phagosomes. Nous avons utilisé un système expérimental original utilisant la microscopie à ondes évanescentes pour montrer, que la dynamine 2 est recrutée avec l’actine dans les coupes phagocytaires en formation et qu’elle s’accumule au site de fermeture des phagosomes dans des macrophages vivants. L’inhibition de son activité GTPase induit une inhibition de l’efficacité de phagocytose et un défaut de la dynamique de l’actine lors de l’extension des coupes phagocytaires. De façon surprenante, la dépolymérisation de l’actine conduit à un défaut de recrutement de la dynamine 2 au site de la phagocytose mettant en évidence une régulation croisée entre la dynamine 2 et l’actine. Enfin cette étude a montré que la dynamine 2 joue un rôle critique dans la scission du phagosome. Dans un second temps, nous avons initié l’étude des mécanismes impliqués dans la régulation de l’activité du récepteur au complément CR3. L’activation de ce récepteur phagocytaire, qui fait partie de la famille des intégrines, requiert un ancrage à l’actine nécessaire à la signalisation vers la polymérisation d’actine et à la formation des coupes phagocytaires. L’ensemble de ces résultats contribue à une meilleure connaissance des mécanismes moléculaires fins impliqués dans la phagocytose. / Phagocytosis is an important cellular mechanism. It plays a role in both the maintenance of tissue homeostasis and in the immune system. This process, performed by phagocytic cells, including dendritic cells, polymorphonuclear neutrophils or macrophages, enables daily ingestion and elimination of large particles (> 0.5 microns) e.g. bacteria, fungi or cellular debris. It is induced by many phagocytic receptors such as the receptors for crystallizable fragments of immunoglobulins (FcR) and complement receptor (CR3). These receptors induce different signaling cascades but ultimately lead to a remodelling of the actin cytoskeleton and the plasma membrane. Next there is the formation of a phagocytic cup which surrounds and encloses the ingested particle in a closed compartment called the phagosome. While many studies have dissected the phagocytic cup organization induced by the FcR, the mechanism of phagosome closure was not understood. Furthermore, the molecular mechanisms involved in phagosome formation following CR3 engagement are less well described. In this work, we analyzed the role of dynamin 2, a GTPase involved in fission mechanisms of endocytosis vesicles, and in the formation and closure of phagosomes. We used an original experimental system using the total internal reflection fluorescence microscopy (TIRFM) to show that dynamin 2 is recruited with actin during phagocytic cup formation and accumulates at the site of phagosome closure in living macrophages. The inhibition of its GTPase activity induced an inhibition of phagocytosis and a defect in actin dynamics during pseudopod extension. Surprisingly, the depolymerization of actin lead to a defective recruitment of dynamin 2 at the phagocytic site showing there is a cross-regulation between dynamin 2 and actin. Finally, this study showed that dynamin 2 plays a critical role in the scission of the phagosome. Secondly, we initiated the study of the mechanisms involved in regulating the activity of the complement receptor CR3. Enabling this phagocytic receptor, part of the integrin family, requires anchoring actin which is necessary for signaling to the actin polymerization and the formation of phagocytic cups. All these results contribute to a better understanding of the molecular mechanisms involved in phagocytosis purposes.
17

Huntington disease and breast cancer / maladie de Huntington et cancer du sein

Sousa, Cristovao 11 July 2013 (has links)
La maladie de Huntington (MH) est une maladie neurodégénérative autosomale dominante causée par une expansion anormale de CAG dans le gène codant la huntingtine (HTT) qui se traduit dans la protéine HTT par une répétition de polyglutamine, entrainant la mort neuronale. Néanmoins, la MH entraine aussi le développement de symptômes périphériques comme la HTT est une protéine exprimée de façon ubiquitaire. Notamment, la MH a été associé à une plus faible incidence des cancers, mais les mécanismes sous-jacents ne sont pas décrits. Nous avons étudié le rôle de HTT mutée et sauvage dans le cancer du sein, où la protéine est fortement exprimée. Des modèles murins de cancer du sein (MMTV-PyVT et MMTV-ErbB2) exprimant la HTT mutée (souris knock-in transportant 111 GAC) développent des tumeurs mammaires agressives par rapport aux souris exprimant la HTT sauvage. La transition épithéliale-mésenchymateuse est accélérée avec une augmentation de la motilité cellulaire ainsi que de la formation de métastases. Ces tumeurs accumulent le récepteur tyrosine-kinase HER2 à la membrane, en raison d'un défaut d'endocytose dynamine-dépendante en présence de la HTT mutée. La signalisation accrue de HER2 est responsable de l'agressivité des tumeurs exprimant la HTT mutée, comme en témoigne le traitement trastuzumab, un anticorps dirigé contre HER2 qui restaure la motilité et l'invasion des cellules tumorales porteuses de la mutation responsable de la MH. La HTT sauvage a elle-même un rôle protecteur dans le cancer, retardant l’apparition des métastases en raison d'un potentiel rôle dans l’adhésion intercellulaire. Ainsi, notre travail met en évidence des rôles clés de la HTT mutée et sauvage au cours de la progression du cancer du sein. / Huntington disease (HD) is an autosomal dominant neurodegenerative disorder caused by an abnormal CAG expansion in the huntingtin (HTT) gene. The corresponding polyglutamine expansion in the HTT protein causes specific neuronal death, but the consequences of HTT mutation in other tissues are less well understood. Nevertheless, HD mutation causes peripheral symptoms as HTT is an ubiquitous protein. HD was associated to lower cancer incidence, however, the mechanisms behind this effect were not described. Here we have studied the role of wild-type and mutant HTT in breast cancer, where we found the protein to be highly expressed. We demonstrate that mouse breast cancer models (MMTV-PyVT and MMTV-ErbB2) expressing mutant HTT (knock-in mice carrying 111 CAGs) develop aggressive mammary tumors as compared to control mice. Epithelial-to-mesenchymal transition is enhanced with subsequent increased cell motility and metastasis. These tumors accumulate tyrosine-kinase receptor HER2 at the membrane, due to a dynamin-dependent endocytosis defect in the presence of mutant HTT. HER2 enhanced signaling is responsible for the aggressiveness of the mutant HTT expressing tumors, as demonstrated by Trastuzumab treatment, an antibody against HER2 that restores motility and invasion in tumor cells carrying HD mutation. The wild-type HTT has itself a protective role in cancer, inhibiting metastasis due to a possible role in cellular junction maintenance. Thus, our work unravels a key role of HTT in breast cancer progression, with the mutant HTT triggering the development of aggressive and metastatic tumors.
18

Role of pp2a/bβ2 and pka/akap1 in brain development and function via dynamin-related protein 1 (drp1) control of mitochondria shape and bioenergetics

Dickey, Audrey Sarah 01 December 2010 (has links)
Mitochondria are critical for energy production and Ca2+ homeostasis and undergo fission and fusion reactions, perturbation of which can contribute to neuronal injury and disease. Mitochondrial fission is catalyzed by Drp1 (dynamin-related protein 1), a large GTPase tightly controlled by various posttranslational modifications, including phosphorylation. Bβ2 is a neuron-specific postnatally induced protein phosphatase 2A (PP2A) regulatory subunit that mediates PP2A translocation to the outer mitochondrial membrane (OMM) to promote mitochondrial fragmentation and sensitize neurons to various injuries. Opposing PP2A/Bβ2's effect on mitochondrial morphology and cell death is protein kinase A (PKA) anchored to the OMM via A kinase anchoring protein 1 (AKAP1). This dissertation describes how reversible phosphorylation of Drp1 at a conserved Serine residue by an outer mitochondrial kinase (PKA/AKAP1) and phosphatase complex (PP2A/Bβ2) affects dendrite and synapse development in hippocampal neurons and synaptic plasticity and learning and memory in vivo. Inducing mitochondria fragmentation decreases dendritic arbor complexity, but increases spine and synapse number. Mitochondrial elongation induces opposite effects. L-carnitine increases mitochondria membrane potential and recapitulates the dendritic and synaptic effects of mitochondrial elongation. Epistasis experiments substantiate our hypothesis that PP2A/Bβ2 dephosphorylates and PKA/AKAP1 phosphorylates Drp1 to change mitochondrial shape and regulate mitochondria localization, dendrite outgrowth, and synapse development. Bβ2 null mice are viable and fertile, without obvious abnormalities. Bβ2 null mice demonstrate significantly larger cortical and hippocampal neuronal mitochondria than in wildtype. Bβ2 deletion decreases spine number on apical and basal cortical dendrites and hippocampal dendrites. Bβ2 null mice display significantly decreased input/output relationship in the hippocampus, consistent with a decrease in synapse number. In a combined context and cued fear-conditioning protocol, the hippocampal-dependent context recall trial revealed significant deficits in Bβ2 null and heterozygous mice. This deficit is also seen in hippocampal-dependent Barnes maze performance. These results are consistent with the reduced hippocampal long-term potentiation (LTP) found in Bβ2 null mice and demonstrate the importance of Bβ2 in hippocampal synaptic plasticity and memory. In conclusion, PP2A/Bβ2 and PKA/AKAP1 have important roles in mitochondria regulation and dendritic and synaptic development as seen in our results in vitro with rat hippocampal cultures and in vivo with Bβ2 null mice.
19

Dynamique d'échange de la dynamine mesurée dans les cellules vivantes pendant la formation de vésicules d'endocytose / Exchange dynamics of dynamin measured in living cells during endocytic vesicle formation

Claverie, Léa 16 April 2019 (has links)
L'endocytose dépendante de la clathrine (EDC), c’est-à-dire la formation de vésicules recouvertes de clathrine (VRC) à partir de la membrane plasmique, est un processus essentiel dans les cellules eucaryotes. Au cours de l’EDC, la GTPase dynamine est recrutée au cou de la VRC naissante où elle s'oligomérise en hélice. Les changements de conformation induits par l'hydrolyse du GTP catalysent la scission du cou vésiculaire. Ce processus a été étudié en détail par reconstitution in vitro sur des tubules membranaires, mais il doit être établi dans des cellules vivantes, où les interactions de la dynamine avec d'autres protéines comme l'amphiphysine sont critiques. L'imagerie TIRF (Total Internal Reflection Fluorescence) avec le protocole pH pulsé (ppH) sur cellules vivantes permet la détection de la formation de VRC avec une résolution spatiale (~100 nm) et temporelle (2 s) élevée. Ce protocole a révélé que la dynamine présente un recrutement biphasique aux puits recouverts de clathrine (PRC) en maturation avec un pic au moment de la scission mais les paramètres de son recrutement dans les cellules vivantes restent peu clairs. Pour déterminer ces paramètres, j’ai utilisé des techniques d’imagerie sur cellules vivantes pour étudier le recrutement de la dynamine à l’échelle globale et à l’échelle de la molécule unique lors de perturbations aiguës de sa fonction. Mes résultats de thèse ont montré que la dynamine est recrutée à la membrane plasmique, diffuse à l'extérieur des PRC et y est transitoirement piégée. De plus, j’ai déterminé avec des dynamines mutées (1) que le domaine PRD de la dynamine est crucial pour son recrutement aux PRC ; (2) que le domaine PH est important pour la scission vésiculaire mais par pour son recrutement aux PRC ou à la membrane plasmique. Enfin, j’ai observé que la dynamine s'échange en permanence avec un pool extra-PRC, ce qui permettrait son recrutement ultérieur par l'ajout de nouveaux sites de liaison et sa capacité à rétrécir le cou des vésicules suite à l’hydrolyse du GTP. En conclusion, ces données suggèrent qu’aux PRC, les molécules de dynamine (1) sont constamment échangées ; (2) diffusent à des taux similaires tout au long du processus de formation, maturation et scission des vésicules; et (3) l'activité GTPase de la dynamine contribue à la maturation et à la scission des VRC. / Clathrin-mediated endocytosis (CME), the formation of clathrin-coated vesicles (CCV) from the plasma membrane, is an essential process in eukaryotic cells. During CME, the GTPase dynamin is recruited to the neck of nascent CCV where it oligomerizes into helical filaments. Conformational changes induced by the hydrolysis of GTP catalyze the scission of the vesicle neck. This process has been studied in detail with in vitro reconstitution on membrane tubules but it needs to be established in living cells, where interactions between dynamin and other proteins such as amphiphysin are critical. Live cell total internal reflection fluorescence (TIRF) imaging with the pulsed pH (ppH) assay allows the detection of CCV formation with high spatial (~100 nm) and temporal (2 s) resolutions. It has revealed that dynamin is recruited to maturing clathrin-coated pits (CCP) in two phases with a peak at the time of scission but the parameters of its recruitment in living cells remain unclear. To determine these parameters, we have performed live cell imaging of dynamin recruitment at collective and single molecule levels during acute perturbations of its function. My PhD results showed that dynamin is recruited to the plasma membrane, diffuses outside of CCP and is trapped at CCP. Furthermore, we determined with mutated dynamins that (1) the PRD domain of dynamin is crucial for its recruitment at CCP; (2) the PH domain is important for vesicular scission but not for recruitment to CCP or to the plasma membrane. Finally, I observed that dynamin exchanges with an extra-CCP pool at all times: this would allow for its further recruitment by addition of new binding sites and its ability to narrow the vesicle neck after GTP hydrolysis. Altogether, these data suggest that in CCP dynamin molecules (1) are constantly exchanged; (2) diffuse at similar rates throughout the entire process of vesicle formation, from maturation until scission; and (3) that dynamin’s GTPase activity contributes to CCP maturation and scission.
20

Regulation of constitutive platelet-derived growth factor receptor degradation by the 105 kilodalton isoform of ankyrin3

2014 March 1900 (has links)
Deregulation of platelet-derived growth factor receptor (PDGFR) signaling is a driving event in glioblastoma, promotes tumor progression epithelial to mesenchymal transition (EMT) in multiple cancers, modulates the tumor stroma to facilitate tumorigenesis and reduces tumor uptake of chemotherapeutics. Previous studies identified the 105 kDa isoform of ankyrin3 (Ank105) as a binding partner of the PDGFR signaling machinery and demonstrated that expression of Ank105 promoted PDGFR degradation (Ignatiuk et al., 2006)(Ignatiuk et al., 2006)(Ignatiuk et al., 2006). Receptor tyrosine kinases are targeted for degradation via endocytosis and ubiquitin-dependent trafficking to the lysosome. It was hypothesized that Ank105 promoted the constitutive degradation of the PDGFR and attenuation of PDGFR signaling by facilitating endocytosis of the PDGFR and targeting the PDGFR for lysosomal degradation via an ubiquitin-dependent mechanism. The studies in this thesis characterized the effects of Ank105 expression on PDGFR signaling and protein expression levels, determined the endocytic pathways involved in Ank105-mediated PDGFR degradation and studied the role of ubiquitin binding in Ank105 function. The most robust effect of Ank105 expression on the PDGFR was constitutive degradation as PDGFR protein expression levels in Ank105-expressing cells were significantly reduced compared to NIH 3T3 cells in the absence of PDGF ligand. Low constitutive PDGFR levels resulted in attenuated pro-proliferative AKT and mitogen-activated protein kinase (MAPK) signaling in response to ligand stimulation. To determine the endocytic requirements for Ank105-mediated constitutive PDGFR degradation, a constitutive PDGFR degradation assay was developed and the effects of several small molecule endocytosis inhibitors were evaluated. Additionally, the small molecule endocytosis inhibitors were validated by determining the effects of these inhibitors on low density lipoprotein (LDL) uptake and ligand-induced PDGFR degradation in Ank105-expressing cells. Both LDL uptake and ligand induced PDGFR degradation are known to proceed by a clathrin and dynamin dependent mechanism of endocytosis. In Ank105-expressing cells, both LDL uptake and ligand incuded PDGFR degradation were dependent upon clathrin and dynamin function. Interestingly, constitutive PDGFR degradation in Ank105-expressing cells was not dependent upon CME, but required dynamin activity. Expression of Ank105 may promote clathrin-independent, dynamin-dependent, constitutive endocytosis of the PDGFR. Additionally, acute inhibition of either lysosomal or proteasomal degradation strongly impaired constitutive PDGFR degradation, whereas ligand-induced PDGFR degradation was less sensitive to protein degradation inhibitors, while LDL uptake was unaffected. It was unclear if PDGFR was degraded in the proteasome or if the proteasome was involved in sorting of PDGFR to the lysosome for degradation. Ubiquitination of receptors is required to target them for degradation. Ank105 was assayed for the ability to interact with ubiquitin and ubiquitinated proteins. Interestingly, Ank105 bound ubiquitin in vitro via the spectrin binding domain and co-immunoprecipitated with several ubiquitinated proteins, suggesting a role for Ank105 in the sorting of ubiquitinated proteins for degradation. Furthermore, Ank105 co-immunoprecipitated with a number of high and low molecular weight proteins in the absence of PDGF stimulation. Identification of Ank105 binding partners would provide further insight in the mechanism of Ank105-mediated constitutive PDGFR degradation. In summary, Ank105 promoted the attenuation of PDGFR signaling via alteration of constitutive PDGFR endocytosis and targeting of constitutive PDGFR for degradation, potentially through interaction with ubiquitin and ubiquitinated proteins. Reduction of constitutive PDGFR levels in cancers with PDGFR driver mutations, acquired PDGF responsiveness and stromal expression of PDGFR, could significantly reduce tumor proliferation, tumorigenesis and increase effectiveness of chemotherapeutics.

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