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Apesar de a monogamia social ser dominante entre as aves, análises genéticas revelaram relações de parentesco inesperadas, evidenciando diferentes estratégias de reprodução, como a paternidade extra-par e o parasitismo de ninho. Espécies de passeriformes estão entre as mais promíscuas, com altas taxas de paternidade extra-par, enquanto em aves marinhas esse comportamento demonstrou ser menos frequente. Pinguins (Família Spheniscidae) compõem um grupo de 18 espécies de aves marinhas pelágicas e que tem em comum a filopatria, fidelidade a um parceiro e intenso cuidado biparental. Portanto, espera-se que apresentem um comportamento estritamente monogâmico e taxas de paternidade extra-par insignificantes. Avaliamos pela primeira vez o sistema reprodutivo dos Pinguins-de-Magalhães através de uma abordagem genética, buscando investigar a existência e frequência de paternidade extra-par e parasitismo de ninho. O parentesco de 88 filhotes de 44 ninhos de uma colônia na Ilha Quiroga (Argentina) foi determinado com base em análises de 9 marcadores microssatélites. Encontramos baixas taxas de parasitismo de ninho (6%), mas altas taxas de paternidade extra-par (31% e 48% dos ninhos com pelo menos 1 filhote extra-par). Entre os dois anos coletados, encontramos uma pequena diferença na incidência de infidelidade (29% em 2010; 32% em 2011), mas não houve relação com as condições climáticas do período de reprodução da espécie. Além disso, apesar da alta taxa de filhotes extra-par, não encontramos diferença significativa na diversidade genética e nem viés da razão sexual secundária. Acreditamos que a alta taxa de paternidade extra-par encontrada possa ter relação com o comportamento reprodutivo em colônia, a densidade populacional, o sincronismo reprodutivo, ou que parte da paternidade que não correspondeu aos pais sociais seja resultado de troca de parceiros antes da definição final dos casais em cada estação reprodutiva. Nosso estudo pode ajudar a melhor entender e caracterizar o sistema reprodutivo dos Pinguins-de-Magalhães e indica que a espécie é socialmente, mas não geneticamente monogâmica. / Despite the social monogamy being dominant among birds, genetic analysis revealed unexpected kinship relations, showing different reproductive strategies, such as extra-pair paternity and brood parasitism. Passerine species are among the most promiscuous, with high extra-pair paternity rates, while in seabirds this behavior is typically rather less frequent. Penguins (Spheniscidae Family) are a group of 18 species of pelagic seabirds that have in common philopatric behavior, faithfulness to one partner and intense biparental care. Therefore, they are expected to have a strictly monogamous behavior and insignificant rates of extra-pair paternity. For the first time, we evaluated the reproductive system of Magellanic Penguins (Spheniscus magellanicus) through genetic analysis in order to investigate the existence and frequency of extra-pair paternity and brood parasitism. The kinship of 88 offspring of 44 nests from a colony on Quiroga Island (Argentina) was determined based on the analyses of 9 microsatellite markers. We found low rates of brood parasitism (6%), but high extra-pair paternity rates (31% and 48% of nests with at least one extra-pair offspring). Between the two years sampled, we found a small difference in the incidence of infidelity (29% in 2010; 32% in 2011), but no connection with the climatic conditions of each breeding season. In addition, despite the high rate of extra-pair offspring, we found no significant difference in the genetic diversity and no bias in the secondary sex ratio. We believe that the high rate of extra-pair paternity found in our study may be a result of their reproductive behavior of nesting in colonies, breeding synchrony, density, or that part of the mismatching paternity is due mate switching. Our study may help to better understand and characterize the reproductive system of Magellanic penguins and indicates that this species is socially but not sexually monogamous.

Apesar de a monogamia social ser dominante entre as aves, análises genéticas revelaram relações de parentesco inesperadas, evidenciando diferentes estratégias de reprodução, como a paternidade extra-par e o parasitismo de ninho. Espécies de passeriformes estão entre as mais promíscuas, com altas taxas de paternidade extra-par, enquanto em aves marinhas esse comportamento demonstrou ser menos frequente. Pinguins (Família Spheniscidae) compõem um grupo de 18 espécies de aves marinhas pelágicas e que tem em comum a filopatria, fidelidade a um parceiro e intenso cuidado biparental. Portanto, espera-se que apresentem um comportamento estritamente monogâmico e taxas de paternidade extra-par insignificantes. Avaliamos pela primeira vez o sistema reprodutivo dos Pinguins-de-Magalhães através de uma abordagem genética, buscando investigar a existência e frequência de paternidade extra-par e parasitismo de ninho. O parentesco de 88 filhotes de 44 ninhos de uma colônia na Ilha Quiroga (Argentina) foi determinado com base em análises de 9 marcadores microssatélites. Encontramos baixas taxas de parasitismo de ninho (6%), mas altas taxas de paternidade extra-par (31% e 48% dos ninhos com pelo menos 1 filhote extra-par). Entre os dois anos coletados, encontramos uma pequena diferença na incidência de infidelidade (29% em 2010; 32% em 2011), mas não houve relação com as condições climáticas do período de reprodução da espécie. Além disso, apesar da alta taxa de filhotes extra-par, não encontramos diferença significativa na diversidade genética e nem viés da razão sexual secundária. Acreditamos que a alta taxa de paternidade extra-par encontrada possa ter relação com o comportamento reprodutivo em colônia, a densidade populacional, o sincronismo reprodutivo, ou que parte da paternidade que não correspondeu aos pais sociais seja resultado de troca de parceiros antes da definição final dos casais em cada estação reprodutiva. Nosso estudo pode ajudar a melhor entender e caracterizar o sistema reprodutivo dos Pinguins-de-Magalhães e indica que a espécie é socialmente, mas não geneticamente monogâmica. / Despite the social monogamy being dominant among birds, genetic analysis revealed unexpected kinship relations, showing different reproductive strategies, such as extra-pair paternity and brood parasitism. Passerine species are among the most promiscuous, with high extra-pair paternity rates, while in seabirds this behavior is typically rather less frequent. Penguins (Spheniscidae Family) are a group of 18 species of pelagic seabirds that have in common philopatric behavior, faithfulness to one partner and intense biparental care. Therefore, they are expected to have a strictly monogamous behavior and insignificant rates of extra-pair paternity. For the first time, we evaluated the reproductive system of Magellanic Penguins (Spheniscus magellanicus) through genetic analysis in order to investigate the existence and frequency of extra-pair paternity and brood parasitism. The kinship of 88 offspring of 44 nests from a colony on Quiroga Island (Argentina) was determined based on the analyses of 9 microsatellite markers. We found low rates of brood parasitism (6%), but high extra-pair paternity rates (31% and 48% of nests with at least one extra-pair offspring). Between the two years sampled, we found a small difference in the incidence of infidelity (29% in 2010; 32% in 2011), but no connection with the climatic conditions of each breeding season. In addition, despite the high rate of extra-pair offspring, we found no significant difference in the genetic diversity and no bias in the secondary sex ratio. We believe that the high rate of extra-pair paternity found in our study may be a result of their reproductive behavior of nesting in colonies, breeding synchrony, density, or that part of the mismatching paternity is due mate switching. Our study may help to better understand and characterize the reproductive system of Magellanic penguins and indicates that this species is socially but not sexually monogamous.

The epaulets of male Red-winged Blackbirds (Agelaius phoeniceus) are frequently cited as a sexually selected plumage ornament, but a number of laboratory and field studies provide little evidence that they are currently experiencing sexual selection. We used hair dye to dull epaulets of free-living territorial males prior to pair formation to determine if manipulated males experienced disadvantages in comparison with control males. We found no differences between control males and males with dulled epaulets in territorial behavior (territory size, song rate, trespass rate, and loss of territory), paternal care (time spent on territory and in antipredator sentinel behavior, and response to a model crow to simulate the threat of predation), pairing success (number of social mates), apparent reproductive success (numbers of nesting attempts, eggs/nest, nestlings/egg, and fledglings/nestling), or realized reproductive success (numbers of within-pair, extra-pair, and total fledglings as determined by DNA fingerprinting). We then used a meta-analysis of 11 published studies of Red-winged Blackbirds to determine if there is an overall effect of epaulet color or size on male-male competition, female choice, or reproductive success. Our results show that epaulet size has a small positive effect on male reproductive success, but epaulet color has no effect on male-male competition, female choice, and male reproductive success. One explanation for the seeming contradiction between studies that show that epaulets are necessary for territory defense and those that conclude that epaulets are not currently under selection is that epaulets serve as one of several cues of species recognition, especially among males at close range. An alternative explanation proposes counter-balancing intersexual advantages and intrasexual disadvantages of epaulet expression. Additional studies are needed to test these alternatives.

Considering the high reproductive investment of the social male and the cost to the female of losing this benefit by soliciting copulations outside the social pair bond, it is expected that most raptor populations would exhibit low to no occurrence of extra-pair paternity (EPP). This holds true for the majority of raptor species studied to date with only one exception of an urban Cooper's hawk (Accipiter cooperii) study which reported an unexpectedly high extra-pair young frequency of 19.29%. In our study we examined the frequency of EPP within a red-shouldered hawk (Buteo lineatus) population residing in the suburban/urban matrix of southwest Ohio. During the breeding seasons of 2018 and 2019, 181 breeding age and nestling individuals were color-banded and sampled for genetic analysis using nine microsatellite loci. After genotyping a total of 40 broods (with at least two nestlings per brood) and both presumptive parents of each brood, no clear evidence of EPP was detected. However, at one nest site, the entire brood of four chicks was not sired by the adult male observed during the courtship period, nor another adult male observed tending the chicks later in the season. We suspect that this particular nest represented two instances of rapid mate replacement rather than extra-pair fertilization by a third unsampled male, because none of the chicks were sired by either of the two adult males observed at the nest. We also reviewed potential factors contributing to our finding of overall genetic monogamy in our study population in comparison to other raptor taxa EPP studies. Our results suggested that factors other than habitat composition alone play an important role in determining the type of breeding strategy exhibited by different raptor populations.

Master of Science / Department of Biology / Brett K. Sandercock / Samantha Wisely / In birds, the offspring of females in socially monogamous species can be sired not only by their social partner (within-pair mating) but also by other males (extra-pair mating), resulting in broods of mixed paternity. Several hypotheses have been proposed which attempt to explain the adaptive significance of this behavior, including the genetic diversity hypothesis, the good genes hypothesis, the genetic compatibility hypothesis and the fertility insurance hypothesis. I report results of a 5 year population study of the Upland Sandpiper (Bartramia longicauda) at Konza Prairie Biological Station in northeast Kansas. My objective was to determine the genetic mating system of this socially monogamous shorebird, and determine which of the genetic hypotheses best explains the patterns of extra-pair paternity (EPP) in the population. As part of the analysis, I optimized laboratory protocols for genetic sexing of our monomorphic study species. Potential errors in molecular sexing have been previously described but usually result in females being misidentified as males. Here, I report evidence that events in PCR reactions can lead to the opposite error, with males misidentified as females. I recommend the use of multiple primer sets and large samples of known-sex birds for validation when designing protocols for molecular sex analysis. I genotyped birds and tested for the existence of EPP in 58 family groups of Upland Sandpipers. I found 15% of chicks and 30% of broods were the result of extra-pair paternity in this population, which is high in comparison to other socially monogamous shorebirds. Only 2% of chicks and 2% of broods were attended by females unrelated to the young. I tested ecological covariates known to influence EPP in other birds including relatedness of mated pairs, morphology of the within-pair male, and nest initiation date, as well as variables which signify genetic benefits, including morphology of the offspring and offspring heterozygosity, but found no significant relationships. None of the prevailing genetic hypotheses can fully explain the high rates of EPP in this population of Upland Sandpipers. However, the discovery of fine-scale genetic structure in female birds, but not in males, suggests female natal philopatry or male-biased dispersal. This sex-specific genetic structure could be a mechanism of inbreeding avoidance, thereby eliminating the need for females to choose mates based on relatedness. This study provides the first estimates of EPP for the socially monogamous Upland Sandpiper, and provides evidence that the inbreeding avoidance mechanism of engaging in extra-pair copulations does not seem to be as important in Upland Sandpipers as in other socially monogamous shorebirds. Future research should include the identification of extra-pair males and the determination of offspring fitness after departure from the nest.

The epaulets of male Red-winged Blackbirds (Agelaius phoeniceus) function in both intersexual and intrasexual contexts, but there is little evidence that they covary with reproductive success in this well-studied species. We used path analysis of male/territory traits, mating success, and reproductive success of unmanipulated males to estimate current directional selection. Territory size had a positive effect on number of within-pair mates. Number of extra-pair mates had a positive effect on number of extra-pair fledglings, and number of within-pair and extra-pair fledglings had positive effects on total number of fledglings. We also reddened epaulets of free-living territorial males to determine whether manipulated and control males differ in territorial behavior, mating success, or reproductive success. Compared with control males, males with reddened epaulets incurred elevated rates of trespassing and territorial challenges, lost their territories more often, and were unable to produce extra-pair offspring. Despite these differences, however, the realized reproductive success of experimental and control males did not differ significantly, perhaps because males with reddened epaulets devoted more time to anti-predator vigilance and were more aggressive toward a simulated predator than were control males. An apparent lack of current sexual selection on epaulet color may be a form of counter-balancing sexual selection in which male aggression against redder epaulets opposes female preference for redder epaulets, or it might be the result of males compensating for lost extra-pair fertilizations by increasing their parental care.

The Australian magpie (Gymnorhina tibicen) is a large, sedentary, omnivorous passerine. In some populations, individuals live in groups, and some of these groups breed cooperatively. The white-backed magpie (G. t. tyrannica) from the south-eastern corner of the continent, has had relatively little study, and few details are known of its mating system, social structure, and method of parental care. I conducted an observational study on a population of white-backed magpies, recording details of their demography, dispersal, breeding system, and parental care. In conjunction, I conducted a genetic analysis of the population, to determine if the genetic mating system matched the observed social system, to detect instances of extra-group mating, and to sex juvenile birds. Extra-pair paternity (EPP) is a common feature of the mating systems of many birds. The rate of EPP may vary between species, races and populations. I made a comparison of extra-group paternity (EGP) rates between two races of the Australian magpie, to determine if similar mating systems were being employed. The two populations had similar social structure, but differed in group size and dispersal. I predicted that dispersal differences would have a profound effect on the rate of EGP between the populations, as the population with the lower rate of dispersal and higher chance of breeding with a close relative would engage in EGPs more frequently. Eight microsatellite loci were used to determine parentage in the white-backed Australian magpie. The rate of EGP was found to be 44%. Dispersal rates were estimated from observational data. Over half of the juvenile magpie cohort from the previous breeding season leave the territorial group. These results contrast sharply with the results found by other researchers in a population of western Australian magpies (G t. dorsalis). In this population, 82% EGP is recorded and dispersal of juveniles is close to nil. The results indicate that dispersal rate is a potentially important predictor of rates of extra-group fertilisations between populations of this species, and suggest that females maximise their reproductive output by avoiding breeding with close kin. The reproductive success of a male bird is often correlated with measurable traits that predict his intrinsic quality. Females are thought to select mates based on their quality to gain their 'good genes'. Male Australian magpies of the white-backed race were trapped in two breeding seasons. Measurements were taken of morphometric and other characteristics in order to discover whether particular traits of males were associated with: a) number of fledglings produced in the territory per season; b) percentage of offspring sired in the territory; and c) whether females select males for their 'good genes'. The only variable that was correlated with number of territorial offspring was feather lice load. Males with high numbers of lice were less likely to produce territorial fledglings in one season and across both seasons. Males of inferior quality may be subject to increased conspecific territorial intrusions, leading to more time spent on defence, more failed breeding attempts, less time allocated to grooming and thus high parasite loads. Males that produced many territorial fledglings were more likely to gain genetic paternity of at least some of them, although again this was significant for only one season. Also, across both seasons, a high number of females in the group was correlated with increased paternity within the group. The general lack of correlation between the variables and level of genetic paternity may be due to females engaging in extra-group mating primarily to avoid breeding with a close relative rather than to choose a quality male. In this scenario, males would not have to be 'high quality', but merely genetically different to the female's social mate. Extra-group paternity (EGP) can affect paternal effort. It may also influence the helping effort of auxiliary birds in cooperatively breeding species. If helping is driven by kin selection, helpers should decline to provision unrelated young. Relatedness becomes difficult to assess however, when females mate outside the group. Alternative rewards may then become important in helper decisions. In my study population of Australian magpies, 38% of fledglings were sired by males outside the territorial group. In a second population (G. t. dorsalis), 82% of fledglings were sired by extra-group males. I observed within-group male and helper feeding effort over three breeding seasons in the first population and obtained data recorded over a single season in the second population. In both populations, males provisioned young regardless of relatedness, as did helpers. Males provisioned less than the nesting female on average. Paternal effort did not reduce with an increase in the rate of EGP between populations. In the population with intermediate levels of EGP, the white-backed magpies, I observed helpers in about half of the sampled territories that produced fledglings. Helpers did not increase the production of young. In the population with high levels of EGP, western magpies, I detected helping behaviour in proportionally more territories. It appears that Australian magpie helpers provide help in order to pay 'rent' and remain on the natal territory. I discuss these results in light of the differences between the two races of magpie and the major theories regarding male parenting decisions and helper activity. Finally, I examine the relatively high rates of EGP's in the Australian magpie from a phylogenetic perspective. Although inbreeding avoidance is strongly supported by this study as the major reason EGP is so common in magpie populations, there may be an element of phylogenetic inertia that maintains the frequency of this behavioural trait. I comment upon the use of single-population estimates of species EGP rates in comparative analyses, given the intraspecific variation discovered between Australian magpie populations. Future directions for the study of mate choice in the Australian magpie are outlined with a proposal to study variation at the major histocompatibility complex between mated pairs.

Molecular techniques have revealed that avian mating system is more diverse and complex than previously thought. Both males and females can use alternative reproductive tactics to increase their fitness. Here, we have determined the prevalence of conspecific brood parasitism (CBP, 22% of nests), quasi-parasitism (QP, 6.5% of nests) and extra-pair paternity (EPP, 51.2% of nests) in European subspecies of barn swallow (Hirundo rustica rustica). In contrast to EPP and CBP, QP is rare and has been described in only a few bird species. Our data indicate nonrandom QP patterns, suggesting that this tactic can be considered a third alternative reproductive strategy, alongside CBP and EPP. Sexual ornaments are usually assumed to evolve as condition-dependent signals of individual quality. In this context, a positive correlation between the expression of ornamental traits and survival, is expected. Evolutionary theory predicts that females seek extra-pair fertilizations from high-quality (more ornamented) males and EPP has consequently been proposed as a principal protagonist in the evolution of male secondary sexual traits, however empirical evidence in support of the assertion is relatively scarce. Despite decades of research into the role of EPP in sexual selection, the potential fitness advantages for...

Inbreeding occurs when relatives mate and have offspring. Inbreeding depression is hypothesized to have influenced the evolution of mating systems and behavioural mechanisms of inbreeding avoidance in the animal kingdom. Inbreeding in the wild is difficult to measure, as in order to build a pedigree allowing us to identify matings between relatives, the identity of as many as possible members of a population needs to be known. For a long time, the main source of knowledge about inbreeding depression was based on laboratory and agricultural studies, which did not reflect the array of environmental pressures wild populations have to cope with. In consequence, the deleterious consequences of inbreeding have often been underestimated. This is problematic because accurate estimates of the effect size of inbreeding depression are needed to study the strength of selection on inbreeding avoidance mechanisms, and are also of importance to conservation genetics. The aim of this thesis was to use pedigree data to infer the occurrence and effects of inbreeding using over forty years of breeding events of the great tit Parus major from Wytham Woods, Oxfordshire. The effects of inbreeding on fitness were investigated across a life-history continuum, and across environments. I found that close inbreeding (f=0.25) resulted in pronounced inbreeding depression, which acted independently on hatching success, fledging success, and recruitment success, and reduced the number of fledged grand-offspring by 55%. My results therefore suggest that estimates of fitness costs of inbreeding must focus on the entire life cycle. I also show that the variation in the strength of inbreeding depression varies across environments, particularly so the more the environmental variable considered is linked to fitness. These results emphasise the need of using relevant environmental contrasts when investigating inbreeding by environment interactions. I further asked whether individuals involved in matings with relatives differed relative to individuals mating with unrelated partners. I did not find any evidence for clear predictors of inbreeding, and I show that inbreeding depression in our population is entirely independent of any tendency for low quality parental genotypes, or phenotypes, to inbreed. Neither did I find any evidence for active inbreeding avoidance: great tits did not mate less often with kin than expected based on several scenarios of random mating, nor did I find increased rates of extra-pair paternity among birds breeding with relatives. In fact, I observed quite the contrary, as birds mating with kin exhibited a higher than average rate of close inbreeding relative to all scenarios of random mating investigated, showed lower rates of extra-pair paternity and divorce than birds mated to unrelated partners. I hypothesise that cases of occasional inbreeding in this population may result from mis-imprinting or a related process whereby some birds develop particularly strong bonds that are at odds with all predictions of avoiding inbreeding. Finally, I asked to what extent natal dispersal, a behaviour that is often hypothesized to play an important role in avoiding inbreeding, indeed reduces the likelihood of inbreeding. I found that male and female individuals breeding with a relative dispersed over several-fold shorter distances than those outbreeding. This led to a 3.4 fold increase (2.3-5, 95% CI) in the likelihood of close inbreeding relative to the population average when individuals dispersed less than 200m. This thesis demonstrates that inbreeding has deleterious effects on a wild population of birds, occurring throughout an individual’s life, and is of varying strength across environments. My findings strongly support the theory that natal dispersal should be considered as a mechanism of prime importance for inbreeding avoidance.