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Regulation of the Vitis vinifera PGIP1 gene encoding a polygalacturonase-inhibiting proteinJoubert, Dirk Albert, 1973- 03 1900 (has links)
Thesis (PhD)--University of Stellenbosch, 2004. / ENGLISH ABSTRACT: Plant-pathogen interactions have been intensively investigated in the last decade. This
major drive towards understanding the fundamental aspects involved in plant disease
resistance is propelled by the obvious agricultural and economical benefits that are
intrinsically linked to disease and stress resistant plants. It is, therefore, not surprising
that fundamental research in this area is not just restricted to model organisms, such as
Arabidopsis and tobacco, but also extends to more traditional crop plants, such as
maize, bean, soybean, apples, grapevine etc. In grapevine for instance, several genes
involved in disease resistance have been isolated. One of these genes, encoding for a
polygalacturonase inhibiting protein (PGIP), has been studied extensively. PGIPs are
cell wall bound, contain leucine rich repeats (LRR) and are found in all dicotyledonous
plants so far examined. In most cases, pgip genes occur in small multigene families
and expression is often tissue specific and developmentally regulated. Up-regulation of
PGIP-encoding genes typically occurs upon pathogen infection, treatment with elicitors,
salicylic acid (SA), jasmonic acid (JA), cold treatment and wounding. Differential
regulation and specificity have been shown to occur between members of the same
multigene family. Differential regulation even extends to the utilization of separate
pathways to induce pgip genes from the same family in response to a single stress
stimulus. PGIPs interact with cell wall macerating polygalacturonases (PGs) that are
secreted by pathogenic fungi during the infection process. The antifungal action of
PGIPs is thought to depend on a dual action. The physical interaction of PGIP with PGs
has an inhibitionary effect, resulting in (i) a slower fungal infection rate and (ii) the
prolonged existence of long chain oligogalacturonides (OGs). These oligosaccharides
are able to elicit a general plant defense response, enabling the plant to further retard or
curb the spread of infection.
The main objective of this study was to investigate the regulatory aspects
underlying PGIP expression in grapevine. Unlike most characterized PGIP encoding
genes from other dicotyledonous plant species, no evidence to support the existence of
a V. vinifera PGIP multigene family could be found from either genetic or biochemical
analyses. Recently, a genomic DNA fragment from Vitis vinifera cv Pinotage was pathogen interactions with regards to the fundamental processes underlying defense
gene regulation. / AFRIKAANSE OPSOMMING: Die ooglopende voordele wat, vanuit 'n landboukundige én ekonomiese oogpunt, uit
siekte- en stresbestande plante spruit, het gedurende die laaste dekade aanleiding
gegee tot die ontwikkeling van plantpatogeen-interaksies as "n baie belangrike
studieveld. Dit was dus ook te verwagte dat fundamentele navorsing in hierdie area nie
net beperk gebly het tot modelorganismes soos Arabidopsis en tabak (ook natuurlik van
landboukundige belang) nie, maar ook na meer tradisionele landbougewasse soos
mielies, boontjies, sojaboontjies, appels, druiwe, ens. oorgevloei het. Verskeie
siekteweerstands-verwante gene is byvoorbeeld al vanuit wingerd geïsoleer. Een só "n
geen wat vir "n poligalakturonase-inhiberende proteïen (PGIP) kodeer, vorm deel van
hierdie groep gene. Die funksie en regulering van PGIP's is baie goed bestudeer.
Hierdie proteïene word normaalweg in die selwande van die meeste dikotiele plante
aangetref. Leusienryke herhalings is algemeen in PGIP's en hierdie tipe van herhalings
is kenmerkend van proteïene betrokke by proteïen-proteïen-interaksies. Verder word
pgip-gene gewoonlik in klein multigeenfamilies aangetref, waar in die meeste gevalle
die uitdrukking weefselspesifiek en die regulering spesifiek ten opsigte van die
ontwikkelingsfase is. Verskeie faktore kan tot die induksie van pgip-gene lei, soos
onder andere patogeen-infeksie, elisitoor-, salisiensuur-, jasmoonsuur- en kouebehandeling,
asook verwonding. Differensiële regulering word in baie gevalle tussen
lede van dieselfde multigeenfamilie aangetref. Hierdie differensiële regulering kan selfs
bemiddel word deur onafhanklike reguleringsweë in reaksie op dieselfde
induksiestimulus. PGIP's is in staat om te reageer met poligalakturonases (PGs), wat
selwande afbreek en wat gedurende die infeksieproses deur swamme of fungi afgeskei
word. Die effek van hierdie interaksie is tweeledig: (i) Die fisiese interaksie tussen PGIP
en PG moduleer die aktiwiteit van die PG deur die ensiemaksie te inhibeer, en (ii) PGinhibisie
lei tot die verhoogde stabiliteit van langketting-oligogalakturonades, molekules
wat daartoe in staat is om die weerstandsrespons van plante te ontlok. Die inhibisie
van die patogeen-PG's, tesame met die geïnduseerde weerstandrespons, stel die plant
dan in staat om verdere infeksie te vertraag of te verhoed. Die doel van hierdie studie was om die onderliggende aspekte van PGIPregulering
in wingerd te bestudeer. In teenstelling met die meeste plantspesies waar
pgip-gene in klein multigeenfamilies aangetref word, is daar nie 'n pgip-multigeenfamilie
in wingerd nie. Veelvuldige kopieë van In enkele pgip-geen word egter in die
wingerdgenoom aangetref. Daar is onlangs in ons laboratorium In genoom-DNAfragment
vanaf Vitis vinifera cv Pinotage geïsoleer wat die oopleesraam en
5'-stroomopsekwense van In PGIP-enkoderende geen (Vvpgip1) bevat. In hierdie
studie is die uitdrukkingspatroon van Vvpgip1 ten opsigte van weefselspesifisiteit,
korrelontwikkelingsfase, asook die effek van verskeie omgewings en patogeenverwante
stres-stimuli ontleed. Die regulatoriese meganismes van Vvpgip1 bevat spesifieke in
planta-ontwikkelingsfaseseine wat verder deur spesifieke faktore, insluitende
omgewings- en patogeenstres, gereguleer word. In lyn hiermee is mRNS-transkripte
van Vvpgip1 tot wortel- en korrelweefsels beperk, terwyl die mRNS-vlakke ook tussen
verskillende korrelontwikkelingsfases wissel. Kumulatiewe uitdrukking kon
waargeneem word in veráison-korrels in reaksie op verwonding en osmotiese stres.
Die weefselspesifieke uitdrukkingspatroon tipies van wingerd-PGIP is in blare opgehef
in reaksie op Botrytis cinerea-infeksie, verwonding, osmotiese stres, ouksien
(indoolasynsuur) en salisiensuur. PGIP-uitdrukking word ook onderdruk deur In
staurosporien-sensitiewe proteïenkinase, wat In goeie aanduiding is van die
betrokkenheid van proteïenfosforilasie in die seintransduksiekaskade wat tot PGIPuitdrukking
aanleiding gee. Die geïnduseerde PGIP-uitdrukkingsprofiel in wingerdblare
kan ook nageboots word in tabak wat met die Vvpgip1-geen en -promotor
getransformeer is. PG-inhibisie-eksperimente met membraan-geassosieerde proteïenekstrakte
van geïnduseerde wingerdblare het ook dieselfde profiel getoon as dié van
PGIP wat deur die Vvpgip1-geen geënkodeer is.
Die uitdrukkingsprofiel van PGIP in die transgeniese tabakplante het ook bewys
dat die promotor van die Vvpgip1-geen vir die geïnduseerde PGIP-uitdrukkingsprofiel in
wingerdblare verantwoordelik is. In silica-analise van die promotorarea dui op die
teenwoordigheid van verskeie cis-werkende elemente. Die kern promotor en
transkripsie-aanvangsgedeelte is gevolglik eksperimenteel bepaal. Verder het
uitdrukkingseksperimente met promotorfragmente verskeie dele van die promotor geïdentifiseer wat by stimulis-geassosieerde uitdrukking betrokke is. Posisioneel is
hierdie fragmente in goeie konteks met die voorspelde cis-werkende elemente en kan
dus die basis vorm vir verdere studies oor Vvpgip-regulering.
Met hierdie studie word die eerste data verskaf waar die regulering van PGIP
deur omgewingsverwante faktore verbind kan word met onwikkelingspesifieke
toestande in die plant. Verder verskaf die resultate verdere bewyse vir die rol van PGIP
in plant-patogeen-interaksies en lewer spesifieke bydraes tot die onderliggende
prosesse wat by die regulering van siekteweerstandverwante gene betrokke is.
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The grapes of wrath: o romance como instrumento de transformação social / The grapes of wrath: the Novel as an Instrument of Social ChangeGonçalves, Janaina 18 December 2014 (has links)
Este trabalho tem por objetivo uma análise do romance The Grapes of Wrath, de John Steinbeck, de forma a sugerir alguns aspectos determinantes para a atuação marcante do romance em seu contexto sociopolítico. Ou seja, por meio da observação das relações entre o contexto geral de sua criação e aspectos internos do texto, pretendemos desenvolver algumas hipóteses norteadoras para entender a capacidade do romance de atuar como instrumento de tranformação social. / The aim of this work is an analysis of the novel The Grapes of Wrath, by John Steinbeck, in order to suggest some determining aspects for the outstanding performance of the novel on its sociopolitical context. That is, by observing the relationship between the overall context around its creation and internal aspects of its text, we intend to develop some guiding hypotheses to understand the ability of this novel to act as an instrument of social change.
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The grapes of wrath: o romance como instrumento de transformação social / The grapes of wrath: the Novel as an Instrument of Social ChangeJanaina Gonçalves 18 December 2014 (has links)
Este trabalho tem por objetivo uma análise do romance The Grapes of Wrath, de John Steinbeck, de forma a sugerir alguns aspectos determinantes para a atuação marcante do romance em seu contexto sociopolítico. Ou seja, por meio da observação das relações entre o contexto geral de sua criação e aspectos internos do texto, pretendemos desenvolver algumas hipóteses norteadoras para entender a capacidade do romance de atuar como instrumento de tranformação social. / The aim of this work is an analysis of the novel The Grapes of Wrath, by John Steinbeck, in order to suggest some determining aspects for the outstanding performance of the novel on its sociopolitical context. That is, by observing the relationship between the overall context around its creation and internal aspects of its text, we intend to develop some guiding hypotheses to understand the ability of this novel to act as an instrument of social change.
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Identification of host genes involved in the biotrophic interaction between grapevine and powdery mildewHayes, Matthew Allan January 2006 (has links)
Grapevine powdery mildew is caused by Erysiphe necator, an Ascomycete fungus and an obligate biotroph restricted to growth on its grapevine host. Biotrophic pathogens form a stable association with host cells without directly causing cell death, and take up nutrients from, in the case of powdery mildew ( PM ), host epidermal cells ( Rumbolz et al., 2000 ). As the fungus grows, its increasing biomass becomes a strong nutrient sink capable of altering assimilate flow and storage in the host. To identify host genes that may mediate nutrient delivery to powdery mildew infected tissues and therefore may contribute to disease susceptibility, a candidate gene approach using degenerate and RT - PCR, and a nontargeted approach using microarray analysis was instigated. Once identified, " susceptibility genes " could be targeted for manipulation to provide alternative resistance strategies based on reduced susceptibility in the future. In addition to genes encoding pathogenesis and stress related proteins, microarray analysis revealed that transcript levels of a putative metal transporter and a cell wall structural protein were elevated in infected berry skin, while aquaporin water channels and genes associated with photosynthesis were generally repressed. Degenerate PCR was used to isolated new cell wall invertase, monosaccharide and amino acid transporter genes and initial RT - PCR revealed that expression of genes involved in sugar mobilisation were the most significantly modulated by powdery mildew infection. Previously unreported hexose transporters ( HTs ), ( VvHT3, VvHT4 and VvHT5 ) and a cwINV ( VvcwINV ) had been isolated from cDNA prepared from powdery mildew infected grapevine leaves. Full length clones of grapevine HTs and cwINV were obtained by RACE PCR. Heterologous expression of the three new HTs in yeast confirmed that VvHT4 and VvHT5 mediated glucose uptake, while VvHT3 did not function in the yeast system. However, transient expression of a translational fusion of the VvHT3 protein with green florescence protein in onion epidermal cells indicated that it is targeted to the plasma membrane of plant cells. Quantitative RT - PCR analysis of these new genes, together with previously reported grapevine HTs and cytoplasmic and vacuolar invertases, indicated that expression of VvcwINV and VvHT5, were significantly up - regulated by PM infection, while a vacuolar invertase was strongly down - regulated by PM infection. Invertase activity assays were in agreement with these findings, showing elevated sucrolytic activity in insoluble fractions and reduced sucrolytic activity in soluble fractions. These results suggest that apoplasmic phloem unloading of sucrose in the infected leaf is elevated and that VvHT5 is induced to recover the additional hexoses from the apoplasm. Basic localisation studies indicated that VvHT5 and VvcwINV are not induced specifically in powdery mildew infected leaf regions, but are induced in a more diffuse distribution within infected leaves. To determine if induction of VvHT5 and VvcwINV is specific to PM infection or if other stimuli may also mediate these responses, leaves were inoculated with downy mildew or stressed by wounding. Transcript levels of VvHT5 and VvcwINV were elevated by wounding and downy mildew infection, suggesting that the induction of these genes may be part of a general stress response. To explore the signalling pathways that may underlie these responses, leaves were treated with the plant growth regulators ethylene, jasmonate and abscisic acid. Exogenous application of ethylene and methyl jasmonate only marginally affected the expression of the genes studied, however foliar application of abscisic acid ( ABA ) induced gene expression changes similar to those observed in response to powdery mildew infection and wounding. Promoter sequences of VvHT3, VvHT4, VvHT5 and VvcwINV were isolated and analysed for the presence of regulatory elements. Compared with the promoters of VvHTs that were not induced by pathogen infection or wounding, the VvHT5 and VvcwINV promoters contained numerous motifs associated with induction by ABA including ABRE, Myc and Myb binding elements. The path of sugar loading into the mesocarp of grape berries during ripening is still poorly understood and few molecular components associated with this process have been described. Quantitative RT - PCR was used to monitor the expression of five HTs and VvcwINV during Cabernet sauvignon and Shiraz berry development and ripening. Of the three new HTs reported here, the expression of VvHT3 is most consistent with a potential role in sugar loading, while VvHT5 is induced late in this process. VvcwINV transcript levels were high pre - ripening and also during the later stages of ripening, therefore based on this expression pattern, a role for this enzyme during ripening is not clearly evident. These results are discussed in terms of an apoplasmic step in phloem unloading in ripening grape berries. This study has provided new insights into the molecular and biochemical processes associated with the formation of carbohydrate sink metabolism in response to stress stimuli, and sugar delivery to grape berries during ripening. ABA - dependant pathways may mediate the stress - associated induction of VvcwINV and VvHT5, presumably to recruit additional carbohydrates to the affected organ to energise repair and defence responses. At this stage it is unknown if this response is beneficial to pathogen nutrition, however potentially, modification of genes associated with carbohydrate sink metabolism could provide an alternative way to engineer resistance to this pathogen. / Thesis (Ph.D.)--School of Agriculture, Food and Wine, 2006.
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Effect of timing of water deficit on fruit development and composition of Vitis vinifera cv. ShirazMcCarthy, Michael G. (Michael George) January 1997 (has links) (PDF)
Includes bibliographies. This thesis describes an irrigation experiment established on Vitis vinifera cv. Shiraz in a mature vineyard in the Australian Murray-Darling basin. It concentrates on the relationship between the timing of the water deficit and the depth of irrigation applied and the difference in berry weight between different irrigation treatments. The study includes a polynomial equation which describes the relation between growing degree days and °Brix. A two phase linear model is used to describe the change in red-free glycosyl-glucose (G-G).
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Response of grapevines to partial drying of the root systemDry, P. R. January 1997 (has links) (PDF)
Bibliography: p. 261-273. The general hypothesis tested in this study was that: 'partial drying of the root system of grapevines will result in reduced vegetative growth with beneficial effects for fruit yield, fruit composition and water-use efficiency'. Previously published work has suggested that partial drying of the root system may give rise to non-dydraulic root-derived signals capable of changing leaf development and transpiration.
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Sun exposure and flavonols in grapesPrice, Steven F. 01 April 1994 (has links)
Graduation date: 1994
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Effect of timing of water deficit on fruit development and composition of Vitis vinifera cv. Shiraz / M.G. McCarthy.McCarthy, Michael G. (Michael George) January 1997 (has links)
Includes bibliographies. / vi, 176, 29 p. : ill. ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / This thesis describes an irrigation experiment established on Vitis vinifera cv. Shiraz in a mature vineyard in the Australian Murray-Darling basin. It concentrates on the relationship between the timing of the water deficit and the depth of irrigation applied and the difference in berry weight between different irrigation treatments. The study includes a polynomial equation which describes the relation between growing degree days and ?p0?sBrix. A two phase linear model is used to describe the change in red-free glycosyl-glucose (G-G). / Thesis (Ph.D.)--University of Adelaide, Dept. of Horticulture, Viticulture and Oenology, 1997
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Response of grapevines to partial drying of the root system / Peter Ronald Dry.Dry, P. R. January 1997 (has links)
Bibliography: p. 261-273. / vi, 273 p. : ill. (some col.) ; 30 cm. / Title page, contents and abstract only. The complete thesis in print form is available from the University Library. / The general hypothesis tested in this study was that: 'partial drying of the root system of grapevines will result in reduced vegetative growth with beneficial effects for fruit yield, fruit composition and water-use efficiency'. Previously published work has suggested that partial drying of the root system may give rise to non-dydraulic root-derived signals capable of changing leaf development and transpiration. / Thesis (Ph.D.)--University of Adelaide, Dept. of Horticulture, Viticulture and Oenology, 1998
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The characterisation of selected grapevine cultivars using microsatellitesRoss-Adams, Helen Esther January 2002 (has links)
Thesis (MScAgric)--Stellenbosch University, 2002. / ENGLISH ABSTRACT: Grapevine supports one of the oldest industries in South Africa today, and is also of
significant international importance. With increasing international trade and the
transport of fruit and other grapevine-derived products between borders, it has
become increasingly important for South African farmers and viticulturalists to ensure
their products conform to strict international market requirements if they are to remain
competitive. Such requirements include the correct and accurate identification of
berries and wines according to cultivar. In light of this, 26 different wine, table grape
and rootstock cultivars, as well as a number of clones from KWV's core germplasm
collection were characterised at 16 microsatellite marker loci. Microsatellite markers
are known for their high level of informativeness, reliability and reproducibility, and
are widely used in the identification and characterisation of plant varieties, population
analyses and forensic applications. Unique allelic profiles were obtained for all but
two plants, which proved to be identical at all loci considered, and thus 'clones'.
These profiles were collated to form a database, containing the DNA fingerprints of
each sample at each locus. The relative levels of informativeness of each marker used
were also determined, and compared with those found in the literature. Six markers
proved to be highly informative, and are promising in the potential application of this
technology to other cultivars. The applicability of microsatellite markers to such
studies is confirmed; this approach could easily be extended to include any number of
cultivars of national and international interest. The results of such an investigation
would have important implications for both the farming and commercial industries
alike. / AFRIKAANSE OPSOMMING: Wingerd ondersteun een van die oudste industriee in Suid-Afrika vandag, en is ook van groat
intemasionale belang. Met die toenemende intemasionale ruilhandel en die vervoer van vrugte
en ander wingerd produkte tussen grense, het dit toenemend belangrik geword vir SuidAfrikaanse
wingerdboere om te. verseker dat hulle produkte voldoen aan die streng vereistes
van die intemasional mark, indien hulle kompeterend wil bly. Hierdie vereistes sluit in die
korrekte en akkurate identifisering van druiwe en wyn volgens kultivar. Met hierdie vereistes
in ag geneem, is 26 verskillende wyn, tafeldruif en wortelstok kultivars, asook 'n aantal klone
van die KWV se kern kiemplasma versameling, gekarakteriseer by 16 mikrosatelliet merker
loki. Mikrosatelliet merkers word gekenmerk deur 'n hoe vlak van informatiwiteit,
betroubaarheid en herhaalbaarheid en word wydverspreid gebruik in die identifisering en
karakterisering van plant varieteite, populasie analises en forensiese toepassings. Unieke
alleliese profiele is vir a1 die plante verkry, behalwe vir twee plante wat identiese resultate by
alle loki opgelewer het en dus as "klone" beskou kan word. Hierdie profiele is bymekaar
gevoeg om 'n databasis te vorm wat die DNA vingerafdrukke van elke monster by elke lokus
bevat. Die relatiewe vlak van informatiwiteit van al die merkers is ook bepaal en vergelyk met
merkers in die literatuur. Ses van die merkers blyk om hoogs informatief te wees en lyk
belowend in die potensiele toepassing van hierdie tegnologie op ander kultivars. Die
toepaslikheid van mikrosatelliet merkers op sulke studies is bevestig; hierdie benadering kan
maklik aangepas word om enige aantal kultivars van nasionale en intemasionale belang in te
sluit. Die resultate van s6 'n ondersoek sal belangrike implikasies inhou vir beide die boerdery
en kommersiele industriee.
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