Macroinvertebrates constitute the backbone of megafaunal communities in benthic ecosystems around the globe. Many macroinvertebrates have vital roles in benthic ecosystems, ranging from enhancing habitat complexity to providing staple food sources for other organisms. Regardless of how familiar macroinvertebrates are to the general public, very few studies have attempted to describe benthic macroinvertebrate assemblages across large spatial scale in the continental shelf waters of the Pacific Northwest. This study describes different subtidal macroinvertebrate assemblages off Washington and Oregon based on species-substrata associations and the key species that distinguish one assemblage from another. Two data sets were used for this study: underwater footage collected by the submersible Delta during 1993-1995 geological surveys, and footage collected by the remotely operated vehicle (ROV) Hammerhead during macroinvertebrate surveys in late summer 2011. Footages from these surveys were used to document species-substrata associations and distinguish different assemblages based on species composition similarities and dissimilarities. In addition, I determined if a specific group of invertebrates, Asteroids (Echinodermata), were useful in explaining different assemblage patterns, after all other environmental parameters were taken into account. Findings of this study can be used not only to shed light on the structure of macroinvertebrate communities in the Pacific Northwest, but also as baseline data for future research on the direct and indirect effects of potential offshore installations on macroinvertebrate communities across the continental shelf waters. / Graduation date: 2012

Stream-restoration projects are usually designed to improve habitat quality for fishes. These projects manipulate flow patterns, substrate distribution, and amount and placement of large woody debris. Consequently, they also affect the size and composition of the aquatic macroinvertebrate community. This research evaluates two types of fish habitat restoration: off-channel structures (alcoves) and in-channel structures (log weirs). I compared macroinvertebrate habitats and communities in natural and artificial alcoves in Upper and South Fork Lobster Creeks, Lane Co., and examined the effects of log weirs on in-channel habitat diversity, community composition, drift patterns, and fish consumption of macroinvertebrates. Macroinvertebrate samples were collected from artificial and natural alcoves using hand pumps and D-nets. Within the channel, macroinvertebrates were collected from restored and unrestored reaches with a Hess sampler and using a stratified random sampling scheme. Forty-eight hour invertebrate drift samples were obtained at outlets of log-weir pools. Stomach contents were obtained from coho salmon (Oncorhynchus kisutch) and cutthroat trout (O. clarki) in restored reaches. Although natural alcoves differed from artificial in location within the floodplain, morphology, permanence, and degree of interaction with the stream channel, both alcovetypes provided similar habitats and contained similar macroinvertebrate communities. Average densities and diversity within the alcoves depended on habitat and time of year. Average densities were higher in artificial than in natural. Alcoves contained 29% of species richness within Upper Lobster Creek. Within the stream channel, the diversity of macroinvertebrate habitat was lower in restored than in unrestored sections. Log weirs were associated with reduced taxonomic and functional feeding-group diversity. Composition of drift was not significantly different in restored and unrestored areas; however, drift densities were significantly lower in restored reaches. Diets of fishes in restored areas were composed primarily of organisms produced from outside restored areas. Although in-channel structures may enhance physical habitat for fishes, they may alter or reduce the availability of food for fishes feeding on drifting invertebrates. Recommendations are given for improving the design of stream restoration projects with respect to macroinvertebrates; however stream restoration should focus on restoring whole-system integrity and function, instead of targeting just one or two types of organisms. / Graduation date: 1996

Thesis (doctoral)--Swedish University of Agricultural Sciences, 2005. / Thesis documentation sheet inserted. Appendix reproduces four papers and manuscripts co-authored with R.K. Johnson. Issued also electronically via World Wide Web in PDF format; online version lacks appendix.

Since 1970, Rio Grande wild turkey (Meleagris gallapavo intermedia) numbers in the southern region of the Edwards Plateau of Texas have been declining. Nest-site characteristics and invertebrate abundance were hypothesized as limiting wild turkey numbers in declining regions. Wild turkeys were trapped and fitted with mortality-sensitive radio transmitters on 4 study areas; 2 within a region of stable (northern Edwards Plateau) populations, and 2 within a region of declining populations. Monitoring occurred from February 2001 to August 2003. Nest-site locations were determined via homing during the breeding season. Following nesting attempts/completions, nest fate, vegetation height, visual obstruction, litter depth, percent cover, and cover scores of forbs, grass, litter, and bare ground at each nest site and surrounding area were sampled. This was done to determine if wild turkey hens selected nest sites with vegetative characteristics differing from surrounding habitat. Brood survival was calculated as >1 poult surviving to 2-weeks. Broods were followed for 6-weeks post-hatch or to brood failure. Invertebrates were collected, via sweep-net and D-vac, at each visually confirmed brood location and a paired random site to determine if wild turkey hens selected brood habitat based on invertebrate abundance. Analyses were performed to determine if invertebrate abundance differed between study regions. Turkey hens selected nest sites with greater visual obstruction and more litter depth on both regions of stable and declining turkey abundance. No vegetative differences were detected between stable and declining region nest sites. Frequency of Orthoptera was 3–5 times greater at nest sites on stable regions than declining regions in all 3 years. Orthoptera is a noted food source for young galliformes and comprised the majority of dry mass in invertebrate samples, nest sites and brood locations, on both the stable and declining regions. No differences in total invertebrate dry mass were detected between regional brood locations. Nest-site vegetative characteristics did not alter nest success between regions. The 2 overall objectives of this study were to determine if nest-site vegetation characteristics and invertebrate abundance affected wild turkey numbers in the Edwards Plateau. Regional differences in vegetative characteristics were not detected, thus not likely to be causing differences in turkey numbers between regions. Nest-site invertebrates were found to be 3–5 times greater at stable region nest sites, possibly giving wild turkey poults from stable regions greater initial chances of survival.

Riparian vegetation along streams and rivers affects the aquatic community in numerous ways and often operates as a link for energy flux between forest and streams. The studies presented in this licentiate thesis focus on light and terrestrial invertebrates, two factors influenced by riparian zone structure, which potentially affect stream ecosystems and thus also brown trout (Salmo trutta). Paper I is a laboratory experiment where I study size dependent foraging behavior on surface-drifting terrestrial invertebrates and benthic invertebrates by brown trout. The results show a size-dependent difference in foraging ability with large trout being better able to use terrestrial surface prey than small trout. I argue that such ontogenetic foraging differences are due to both morphological constraints (eg. gape limitation) and size dependent behavioral differences related to predation risk. Paper II consists of a 5 month-long 2x2 factorial design field experiment where my objective was to examine the effects of terrestrial invertebrate input and solar radiation (PAR) on different trophic levels in a boreal headwater stream. More specifically, I followed the effects of increased light and decreased terrestrial invertebrate subsidies on periphyton, benthic macroinvertebrates and two size classes of the top fish predator, brown trout. The results showed that the reduction of terrestrial invertebrate input had size- and seasonal-dependent effects on trout, where large trout had lower growth rates than small trout, mainly in summer. Diet analyses of trout supported growth differences in that large trout in unmanipulated enclosures consumed relatively more terrestrial prey than large trout living in enclosures with reduced terrestrial inputs. A higher reliance on terrestrial prey subsidies by large trout compared to small may be explained by ontogenetic differences in foraging and habitat choice. Despite a 2.5-fold increase in PAR, light did not have an effect on chlorophyll a biomass, nor was there an effect on the density or composition of benthic macroinvertebrates. The lack of effects on primary production may be explained by very low nutrient levels in the stream.

Seasonal changes in reproduction, recruitment, occurrence and growth of marine plant and animal species is a common phenomenon world-wide. This thesis investigates whether such seasonal changes could determine the succession in subtidal phytobenthic communities on free space in the Baltic Sea. My results showed circular seasonal patterns both in the settlement of species and in the annual appearance of communities. The circular seasonal pattern was also observed in the succession. Initial species assemblages were determined by the time space became available for colonisation. Although the succession seemed to be directed towards one site-specific final community structure determined by physical factors, the time of the year when space became available influenced the rate of the succession through species interactions. Rapid growth and timing of settlement and free space occurrence allowed early species to occupy all available space and prevent further colonisation, thereby slowing the succession. My results also showed that both settlement and community structure are influenced by substrate characteristics. Studying community development on vertical artificial structures revealed communities with few species and different composition compared to communities on vertical natural substrates. A field study showed that settlement and community structure changed significantly between 60º and 90º substrate slopes. This thesis shows that some differences in the final community structure are determined already at the settlement stage and that the succession pattern varies depending on when free space occurs. However, small inter-annual and site-specific differences in seasonal settlement periods and site-specific final communities mainly determined by physical factors, suggest that succession patterns are relatively predictable. Seasonal changes seem to cause a spiralling succession towards a final, seasonally undulating, state.

Natural stress and disturbances are important factors affecting the structure and function of ecosystems. However the magnitude of stress has escalated due to anthropogenic activities. Environmental monitoring and toxicity assessments try to protect ecosystems from unwanted human alterations. The aim of this Doctoral thesis was to increase the understanding of the complex effects that environmental stress has on individuals and invertebrate populations. The low saline environment in the Baltic Sea is perceived as stressful for most organisms living there. In Paper I, it was found that Baltic blue mussels living in the less saline northern Baltic Proper (~5 psu) had lower basal metabolism and were more susceptible to toxic exposure than the mussels in the south (~7 psu). There was no genetic differentiation between the mussels from the northern and southern areas while there were genetic differences between mussels from sites within the respective areas (Paper III), indicating that there is not a simple relationship between the health of the mussels and genetic diversity in the microsatellite loci studied. In Paper IV it was found that the heat tolerance of the intertidal dogwhelk Nucella lapillus is oxygen dependent. Increased oxygen levels resulted in higher survival rate. Protein expression profiles also became more similar to those of the controls, compared to the whelks exposed to high temperature and normal oxygen levels. In Paper V and VI it was found that exposure to a single toxicant for more than one generation decreased the genetic diversity in exposed copepod populations even though abundances remained unaltered. In Paper VI, exposure to naturally contaminated sediments, which contained of a mixture of toxicants, did not decrease genetic diversity. However the genetic divergence (FST) within the treatments was very high, probably due to small effective population sizes in the replicates. Likewise in Paper III, the very low blue mussel abundance in the north together with the stressful environment suggests a small effective population in the northern Baltic Proper. In conclusion, my studies show that, measuring effects on several levels, including both functional and structural endpoints will both increase the sensitivity of the tests and increase their ecological relevance.

Common carp (Cyprinus carpio) have been hypothesized to contribute to declines in aquatic macrophytes, waterfowl, and water clarity in Delta Marsh, an 18,500 ha freshwater coastal wetland on Lake Manitoba, Canada. Ten ponds (1-13 ha) were chosen for a two-year experimental manipulation study. Following a year of baseline monitoring, manipulations were conducted in 2002. To facilitate access by carp into isolated ponds, channels were blasted from the main marsh into two ponds. Meanwhile, to restrict or exclude carp access into ponds, channels were either screened or diked to four ponds. Two connected and two isolated ponds functioned as controls. Although common carp were the original subject of the study, it became apparent that hydrological connection to the surrounding marsh had a paramount importance on the abundance and diversity of the fish, amphibian and water-column invertebrate communities. Connectivity, or lack of connectivity, played an important role in the distribution of the fish community, and subsequently the composition and abundance of water-column invertebrates and amphibians. Ponds with direct connection had diverse, mixed-species fish assemblages, with fewer invertebrates and amphibians. Ponds with restricted connections had fish communities composed of tolerant small-sized species and increased abundance of invertebrates and amphibians. Ponds that lacked connection could freeze and lose all fish, and had higher numbers of invertebrates and amphibians. An absence of adult common carp may have been responsible for increased amphibian numbers in the screened ponds, however more study is needed. Confounding impacts of fluctuating water levels made it impossible to implicate common carp for most changes observed within ponds in Delta Marsh. / May 2006

Benthic invertebrates play important roles as feeding resources for many organisms in different food webs. Shifts in predation of these organisms can generate cascading effects and potentially lead to the disappearance of one or more species from a site. Cascading effects can bring impacts to organisms who aren’t even directly involved, why studies in this field are important for understanding sudden changes in ecosystems. I examined the predation from fish and waterfowl on benthic invertebrates in the shallow and eutrophic Lake Tåkern in the plains of Östergötland County, southern Sweden. The study was experimental and used exclosures (three types, eight replicates) in the shape of 130-liter cages to examine the composition of invertebrates. It was conducted during early spring, a relatively unexamined period for this kind of study. I found no significant differences in the control treatment compared to any of the other treatments regarding biodiversity. The invertebrate fauna was dominated by a small number of species, with a relatively patchy spread throughout the sediment area. Furthermore, the results indicate that the fish hadn’t had the time to properly activate their predatory habits due to prolonged winter temperatures. The waterfowl were considered too absent during the test period to affect the invertebrate community. Future studies in this area are recommended to work with a greater sampling area, to reduce the influence of extreme values.

Abstract Fishpond area of Sihcao, Tainan City, approximate 488 hectors, is a part of coastal wetlands of Taiwan. Fishponds can be found almost everywhere in the wetlands, readily forming a fragmented ecosystem. Previous studies on populations of small mammals in coastal wetlands of Taiwan are scarce. Disturbance types found in the study area include straying dogs, working farmers, tillaging of the fishponds, and typhoons, etc, which would probably reduce the abundance of small mammals. The resources such as shelter, vegetation coverage, insects and seeds would increase the abundance of small mammals. The seasonal changes of these environmental factors may in turn affect the population dynamics of small mammals. I monitored the monthly population fluctuation of small mammals and invertebrates in the fishpond habitats, 2008. Six species of small mammals and 106 species of invertebrates were found. The small mammal populations in the Hairy Beggar Ticks region were compared with those within the non-Hairy Beggar Ticks region. More small mammals were found in the Hairy Beggar Ticks region in the sampling period. The vegetation coverage of the former was higher than that of the latter. There was positive correlation between evenness of small mammals and temperature. No differences of the biodiversity of invertebrates were found between the regions in the year. Significant correlation existed between the sunshine duration and the richness of invertebrates. The correlation may be due to the change of photoperiod. There was no significant correlation between the richness of small mammals and that of invertebrates.