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Characterisation of a novel multi-tissue tumour suppressor gene in mouseO'Neill, Vincent John January 2001 (has links)
No description available.
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Regulation of protein phosphatase 2A by proteasomal degradationOberg, Elizabeth Anne 01 December 2012 (has links)
Protein phosphatase 2A (PP2A), a ubiquitous and pleiotropic regulator of intracellular signaling, is composed of a core dimer (A scaffolding and C catalytic subunits) bound to a variable (B) regulatory subunit of either the B, B' or B" families. Further genetic expansion and alternative splicing within each B subunit family affords the enzyme tremendous functional heterogeneity as PP2A contributes dozens of heterotrimers with varying subcellular locations and cellular substrates dictated by the variable B subunit. B'β is a brain-specific PP2A regulatory subunit that mediates dephosphorylation of Ca2+/calmodulin-dependent protein kinase II and tyrosine hydroxylase. Unbiased proteomic screens for B'β interactors identified Cullin3 (Cul3), a scaffolding component of E3 ubiquitin ligase complexes, and the previously uncharacterized Kelch-like 15 (KLHL15). KLHL15 is one of more than 40 Kelch-like proteins, many of which have been defined as adaptors for the recruitment of substrates to Cul3-based E3 ubiquitin ligases. KLHL15/Cul3 specifically targets B'β to promote protein turnover via ubiquitination and proteasomal degradation. Comparison of KLHL15 and B'β expression profiles suggest that the E3 ligase adaptor contributes to selective expression of the PP2A/B'β holoenzyme in the brain. Mapping of KLHL15 residues critical for Cul3 binding and protein dimerization indicate two distinct and independent functions of KLHL15's N-terminal BTB domain while similar analysis of the C-terminal kelch domain identifies a B'β-specific binding core. While B' regulatory subunit association with the AC dimer is mediated by a highly conserved inner core of roughly 400 amino acids, the divergent N-terminus of B'β is found to be both necessary and sufficient for KLHL15-mediated degradation, with Tyr52 having an obligatory role, underlying the selective association of KLHL15 with the B'β regulatory subunit only. KLHL15 can interact with not only the monomeric version of B'β but also the more stable, PP2A/B'β heterotrimer. However, proteasomal targeting is reserved for the B subunit only. The loss of B'β promotes an exchange of B subunits and a reciprocal upregulation of alternative B subunit-containing heterotrimers. That is, excess KLHL15 may not only downregulate B'β-guided PP2A dephosphorylation activity, but moreover, may upregulate PP2A activity dictated by alternative B subunits. Taken together, these data suggest regulatory subunit-specific ubiquitination and proteasomal degradation as a novel mechanism for controlling total cellular PP2A activity.
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Malarial pathogenesis and interventions in Kelch mediated Artemisinin resistance in Plasmodium falciparumPittala, Keerthana 14 June 2019 (has links)
Malaria, a parasitic disease, was commonly associated with third world countries, with the highest mortality in nations in Sub-Saharan Africa and Asia. But, travel increases the risk of spread to more temperate regions, such as Western Europe and the United States where Malaria has been successfully eradicated. In the past 40 years, with a better understanding of the mosquito vector and the parasite itself, advancements in treatment and containment have been made.
Understanding the parasite as well as its pathogenesis is vital in formulating effective treatments. Following the incidences of Plasmodium falciparum, knowlesi, vivax, malaria, ovale, and less commonly cynomolgi and simium over time as well as region helps to better illuminate the methods of Malarial transmission, interplay with environmental factors, and methods of treatment. While each species of parasite is similar in terms of mode of infection, they differ slightly when considering incubation periods and diagnostic and treatment techniques.
Many drugs have been developed to treat Malaria and include Chloroquine, Primaquine, and derivatives of Artemisinin. While the discovery of these drugs was a significant breakthrough that dramatically reduced incidence and deaths caused by Malaria, improper administration of treatment has led to a recent increase in strains of the parasite which have developed drug resistance to Artemisinin Combination Therapies (ACT’s). Of these species, P. falciparum and P. vivax, the most common causes of malaria, are also so far the only species to have developed drug resistance. The goal of this thesis is to explore popular interventions, both drug and public health based, and how research focus has now shifted to better understanding the mechanism of parasitic drug resistance, specifically linked to mutations found in the Kelch protein in P. Falciparum. The recent findings of Kelch mutations pave the way towards addressing the growing problem of anti-Malarial resistance.
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Análise do transcriptoma regulado pela YakA e do papel de KeaA no desenvolvimento de Dictyostelium discoideum / Analysis of the YakA-regulated transcriptome and the role of KeaA in the regulation of Dictyostelium discoideum developmentMantzouranis, Luciana 17 September 2009 (has links)
A YakA é uma proteína quinase necessária para a regulação da resposta a diversos estresses em Dictyostelium e é uma efetora chave da transição do crescimento para desenvolvimento nesse organismo. O gene keaA foi isolado como um supressor do mutante yakA- em uma busca para revelar genes envolvidos na sobrevivência a estresse nitrosoativo. O gene keaA codifica uma proteína com seis repetições kelch na porção C-terminal, um domínio zf-C3HC4 na porção N-terminal, também chamado RING-finger, e uma sequência rica em cisteínas localizada na porção mediana da proteína. Mutantes deficientes em keaA foram avaliados revelando-se um papel para esse gene também no processo de desenvolvimento. A expressão de mRNA de keaA é induzida quando células selvagens crescem e a fonte de alimento começa a esgotar. A indução do mRNA de keaA também ocorre durante o desenvolvimento. Essa indução não é observada em células yakA- indicando que YakA regula KeaA. Células deficientes em keaA expressam baixos níveis de mRNA de pkaC, acaA e carA durante a agregação em baixa densidade celular, o que pode explicar porque as células deficientes em keaA apresentam o processo de desenvolvimento mais lento em baixa densidade celular. Células deficientes em keaA são mais resistentes a estresses nitrosoativo e oxidativo e keaA é necessário para a produção e detecção de AMPc. A análise da agregação de células deficientes em keaA durante o desenvolvimento multicelular indica que KeaA é necessário para que as células participem eficientemente desse processo. Células que super-expressam o domínio rico em cisteínas levam o mesmo tempo que as células selvagens para atingir o estágio de agregação. No entanto, essas células apresentam agregados, culminantes e corpos de frutificação menores. Células que super-expressam o domínio Kelch expressam altos níveis de acaA e carA depois de 8 horas de desenvolvimento, mas os níveis de pkaC são similares aos observados em células selvagens. Isso poderia indicar que o domínio Kelch induz a ativação da PKA. No entanto, essa interação não foi observada em experimentos de duplo híbrido. Adicionalmente, a expressão gênica em resposta a compostos que geram estresse oxidativo e nitrosoativo foi estudada utilizando-se microarranjos de cDNA. Os resultados revelaram um papel de keaA na resposta à pré-carência e no controle do ciclo celular / The YakA is a protein kinase required for the regulation of several stress responses in Dictyostelium and is a key effector of the transition from growth to development in this microorganism. The gene keaA was isolated as suppressor of the yakA- mutant in a screen targeted to reveal genes involved in the survival to nitrosoative stress. The keaA gene codes a protein with six kelch domain repeats at the C-terminus, a zf-C3HC4 domain at the N-terminus, also called RING-finger, and a cysteine-rich sequence located in the mid-portion of the protein. The analysis of mutants deficient in keaA revealed a role for this gene also in the development process. keaA mRNA expression is induced when wild type cells grow and the food source becomes scarce. An induction of keaA mRNA expression also occurs during development. This induction is not observed in yakA- cells, indicating that YakA regulates KeaA. keaA deficient cells express low levels of pkaC, acaA and carA mRNA during aggregation in low cell densities, which may explain why the keaA deficient cells present a delay in development in low cell densities. keaA deficient cells are more resistant to nitrosoative and oxidative stress and keaA is necessary for the production and detection of cAMP. The analysis of agreggation of keaA deficient cells during multicellular development indicated that KeaA is required for the cells to efficiently participate in the process. Cells over-expressing the cisteine-rich domain took the same time as the wild-type cells to reach the aggregation stage. However, these cells present smaller aggregates, culminants and fruiting bodies. Cells over-expressing the Kelch domain express high levels of acaA and carA after 8 hours of development, but the levels of pkaC are kept similar to those in wild-type cells. This could indicate that the Kelch domain induces the activation of PKA. However, this interaction was not observed when we conducted tests in a two-hybrid system. Additionally, gene expression in response to compounds that generate redox stresses was studied using cDNA microarrays. The results revealed a role of keaA in response to pre-starvation and control of cell cycle
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Análise do transcriptoma regulado pela YakA e do papel de KeaA no desenvolvimento de Dictyostelium discoideum / Analysis of the YakA-regulated transcriptome and the role of KeaA in the regulation of Dictyostelium discoideum developmentLuciana Mantzouranis 17 September 2009 (has links)
A YakA é uma proteína quinase necessária para a regulação da resposta a diversos estresses em Dictyostelium e é uma efetora chave da transição do crescimento para desenvolvimento nesse organismo. O gene keaA foi isolado como um supressor do mutante yakA- em uma busca para revelar genes envolvidos na sobrevivência a estresse nitrosoativo. O gene keaA codifica uma proteína com seis repetições kelch na porção C-terminal, um domínio zf-C3HC4 na porção N-terminal, também chamado RING-finger, e uma sequência rica em cisteínas localizada na porção mediana da proteína. Mutantes deficientes em keaA foram avaliados revelando-se um papel para esse gene também no processo de desenvolvimento. A expressão de mRNA de keaA é induzida quando células selvagens crescem e a fonte de alimento começa a esgotar. A indução do mRNA de keaA também ocorre durante o desenvolvimento. Essa indução não é observada em células yakA- indicando que YakA regula KeaA. Células deficientes em keaA expressam baixos níveis de mRNA de pkaC, acaA e carA durante a agregação em baixa densidade celular, o que pode explicar porque as células deficientes em keaA apresentam o processo de desenvolvimento mais lento em baixa densidade celular. Células deficientes em keaA são mais resistentes a estresses nitrosoativo e oxidativo e keaA é necessário para a produção e detecção de AMPc. A análise da agregação de células deficientes em keaA durante o desenvolvimento multicelular indica que KeaA é necessário para que as células participem eficientemente desse processo. Células que super-expressam o domínio rico em cisteínas levam o mesmo tempo que as células selvagens para atingir o estágio de agregação. No entanto, essas células apresentam agregados, culminantes e corpos de frutificação menores. Células que super-expressam o domínio Kelch expressam altos níveis de acaA e carA depois de 8 horas de desenvolvimento, mas os níveis de pkaC são similares aos observados em células selvagens. Isso poderia indicar que o domínio Kelch induz a ativação da PKA. No entanto, essa interação não foi observada em experimentos de duplo híbrido. Adicionalmente, a expressão gênica em resposta a compostos que geram estresse oxidativo e nitrosoativo foi estudada utilizando-se microarranjos de cDNA. Os resultados revelaram um papel de keaA na resposta à pré-carência e no controle do ciclo celular / The YakA is a protein kinase required for the regulation of several stress responses in Dictyostelium and is a key effector of the transition from growth to development in this microorganism. The gene keaA was isolated as suppressor of the yakA- mutant in a screen targeted to reveal genes involved in the survival to nitrosoative stress. The keaA gene codes a protein with six kelch domain repeats at the C-terminus, a zf-C3HC4 domain at the N-terminus, also called RING-finger, and a cysteine-rich sequence located in the mid-portion of the protein. The analysis of mutants deficient in keaA revealed a role for this gene also in the development process. keaA mRNA expression is induced when wild type cells grow and the food source becomes scarce. An induction of keaA mRNA expression also occurs during development. This induction is not observed in yakA- cells, indicating that YakA regulates KeaA. keaA deficient cells express low levels of pkaC, acaA and carA mRNA during aggregation in low cell densities, which may explain why the keaA deficient cells present a delay in development in low cell densities. keaA deficient cells are more resistant to nitrosoative and oxidative stress and keaA is necessary for the production and detection of cAMP. The analysis of agreggation of keaA deficient cells during multicellular development indicated that KeaA is required for the cells to efficiently participate in the process. Cells over-expressing the cisteine-rich domain took the same time as the wild-type cells to reach the aggregation stage. However, these cells present smaller aggregates, culminants and fruiting bodies. Cells over-expressing the Kelch domain express high levels of acaA and carA after 8 hours of development, but the levels of pkaC are kept similar to those in wild-type cells. This could indicate that the Kelch domain induces the activation of PKA. However, this interaction was not observed when we conducted tests in a two-hybrid system. Additionally, gene expression in response to compounds that generate redox stresses was studied using cDNA microarrays. The results revealed a role of keaA in response to pre-starvation and control of cell cycle
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Investigating the role of ectoderm neural cortex 1 in osteoblast differentiationLeah Worton Unknown Date (has links)
The need for anabolic therapies to increase bone formation in difficult orthopaedic circumstances and to treat osteoporosis is an area of intense research focus. There is a current interest in the Wnt signalling pathway as a target for such treatment, with accumulating evidence for a role of this pathway in bone formation. Ectoderm Neural Cortex 1 (ENC1) is a Wnt target gene, not previously studied in bone, which was observed in our laboratory to be up-regulated in an anabolic surgical model of bone formation. The involvement of ENC1 in the differentiation of neuronal and adipocytic cells has previously been reported; therefore, this thesis investigates the expression of ENC1 in cells of the bone and the role of ENC1 during osteoblast differentiation. ENC1 transcript expression was localised to osteoblastic, chondrocytic and osteocytic cells in sections of healing fracture callus and normal mouse bone by in situ hybridisation. The expression of ENC1 was confirmed in differentiating primary osteoblasts and in osteoblastic and osteosarcoma cell lines by quantitative real time PCR and western blotting. ENC1 exists as two protein isoforms of 67 and 57kD in size, which are translated from alternatively spliced ENC1 transcripts. Both isoforms of the protein were detected in differentiating cultures of the pre-osteoblast cell line MC3T3-E1. To address the function of ENC1 in osteoblast differentiation, shRNA knockdown of the endogenous transcript was undertaken in MG63 osteosarcoma cells and in the MC3T3-E1 pre-osteoblastic differentiation model. Stable expression of shRNA targeted to both ENC1 spliceforms resulted in reduced accumulation of alkaline phosphatase positive nodules and alkaline phosphatase transcripts in MG63 cell culture. This reduction was not seen with targeted knockdown of 67kD ENC1 alone. Stable tetracycline-inducible shRNA knockdown targeted to both 57 and 67kD ENC1 isoforms in MC3T3-E1 cells resulted in a significant reduction of Alizarin Red S stained mineralised nodules. When expression of 67kD ENC1 alone was reduced, however, a significant increase in MC3T3-E1 nodule formation was observed. This knockdown had no effect on the expression of early genes involved in osteoblast differentiation Runx2 and osterix, but changes in expression of alkaline phosphatase and osteocalcin mRNA mirrored nodule formation. ENC1 is a member of the BTB-Kelch family of proteins. Some members of this family have recently been found to act as substrate adaptors for the E3 ubiquitin ligase, binding to the cullin 3 component of the complex. These adaptor proteins function to bring a substrate protein within the vicinity of the E2 ubiquitin-conjugating enzyme, thus targeting it for ubiquitination and subsequent proteasomal degradation. The ability of ENC1 to interact with cullin 3 was investigated as a possible mechanism by which it may affect a role in osteoblast differentiation. Full length ENC1 showed robust binding to cullin 3 and weak binding was seen between the N-terminally truncated 57kD isoform and cullin 3. ENC1, therefore, may act as a substrate adaptor protein for the cullin 3 based E3 ubiquitin ligase. These data present ENC1 as a novel candidate protein involved in osteoblast differentiation, and suggest the possible involvement of this protein in proteasomal degradation of a substrate involved in osteoblast differentiation. The ENC1 isoforms and the associated functional pathways thus are possible future therapeutic targets to treat bone loss and enhance or accelerate fracture healing.
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Molecular mechanisms of PLK1 recognition by CUL3/KLHL22 E3-ubiquitin ligase controlling mitotic progression / Mécanismes moléculaires de reconnaissance de PLK1 par l’E3-ubiquitine ligase CUL3/KLHL22 contrôlant la progression mitotiqueMetzger, Thibaud 25 March 2014 (has links)
L’ubiquitination est une modification post-traductionnelle impliquée dans de nombreux mécanismes cellulaires. L’E3-ubiquitine ligase CULLIN 3 (CUL3) est un régulateur essentiel de la progression mitotique, ubiquitinant d’importants régulateurs mitotiques et contrôlant leur localisation subcellulaire. Plus particulièrement, notre travail décrit le rôle de la nouvelle E31 ligase CUL3/KLHL22 dans la régulation de l’activité localisée de Polo-like kinase 1 (PLK1) et de ce fait dans l’établissement d’une progression mitotique précise. Néanmoins, les mécanismes moléculaires qui régissent la reconnaissance de son substrat par CUL3 demeurent inconnus. L’activité catalytique de PLK1 ne semble pas être nécessaire à son interaction avec KLHL22, mais aussi bien son domaine kinase que Polo-box (PBD) suffisent à co-purifier KLHL22. Des mutations au niveau du motif DFG, situé en amont du domaine kinase,et du tryptophane 414 au sein du PBD semblent influer sur la reconnaissance de KLHL22. Les résultats obtenus montrent les premières indications biochimiques du mode d’interaction du complexe CUL3/KLHL22/PLK1. / Ubiquitination is a post-translational modification involved in many cellular processes. The E3 ubiquitin-ligase based on CULLIN 3 protein (CUL3) is an essential regulator of mitotic division in human cells by ubiquitinating several important mitotic regulators and controlling their subcellular localization. In particular, our work described the role of novel CUL3/KLHL22 E3-ligase in regulation of localized activity of Polo-like kinase 1 (PLK1) and there by faithful mitotic progression. However, the molecular mechanisms of substrate recognition by CUL3 remain unknown. The catalytic activity of PLK1 may not be required for binding KLHL22 but both the kinase and the Polo-box domains are sufficient to co-purify KLHL22. Mutating the DFG motif within the kinase domain and the tryptophan 414 within the PBD influence the binding to KLHL22. These results provide first insights into molecular mechanisms of CUL3/KLHL22/PLK1complex.
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Caracterização de um Novo Gene da Família F-box Expresso no Pistilo de Nicotiana tabacum L. / Characterization of a New F-box Family Gene Expressed in the Nicotiana tabacum L. PistilSamantha Vieira Abbad 13 August 2012 (has links)
O estudo da reprodução sexual de plantas e uma área de crescente interesse devido a importância de sementes e frutos em nossa dieta diária, ambos resultantes do desenvolvimento de partes do pistilo, apos fertilização. O objetivo deste trabalho foi caracterizar um novo gene F-box expresso no pistilo de N. tabacum. Proteínas F-box atuam na interação proteína-proteína, geralmente direcionando proteínas alvo para degradação pela via ubiquitina-proteassomo. Foram identificados cinco genes de função desconhecida que codificam putativas proteínas F-box, em duas bibliotecas de cDNAs de estigmas/estiletes de N. tabacum (DEPAOLI, 2006; QUIAPIM et al., 2009) previamente construídas em nosso laboratório. A expressão de cada um destes genes foi analisada nos diferentes órgãos de N. tabacum, por qRT-PCR. O clone 085H05 da biblioteca TOBEST (QUIAPIM et al., 2009) apresentou expressão preferencial nos órgãos florais. Este clone foi selecionado para uma caracterização funcional mais detalhada. O padrão de expressão deste gene foi avaliado no estigma/estilete durante os 12 estádios do desenvolvimento floral de N. tabacum (KOLTUNOW et al., 1990). O resultado revelou que sua expressão e regulada durante o desenvolvimento, atingindo o maior nível de expressão na antese (estádio 12). Isto sugere que este gene esteja envolvido no desenvolvimento do estigma/estilete. A sequência codificadora do gene correspondente a 085H05 foi determinada e, apos amplificação e clonagem, este gene foi denominado S/S_F-box (Stigma/Style_F-box). Para compreender a função da proteína de S/S_F-box, plantas transgênicas de superexpressao e de silenciamento (por RNAi) deste gene foram geradas. As plantas de RNAi apresentaram o estilete e o ovário reduzidos quando comparados ao controle SR1. Em concordância, as plantas de superexpressao produziram flores com o estilete mais alongado do que o controle, alem do estigma e do ovário de maior tamanho. Altas concentrações de exudato foram observadas na superfície do estigma destas plantas, a partir do estádio 7 tardio. No controle SR1, concentrações equivalentes apenas são observadas nos estádios finais do desenvolvimento. Os fenótipos observados nas plantas transgênicas sugerem que a proteína codificada por S/S_F-box esteja envolvida com o desenvolvimento do pistilo e com o controle do tamanho deste órgão. Adicionalmente, as plantas de RNAi apresentaram o fenótipo de perda da dominância apical. Os níveis de expressão do gene S/S_F-box foram avaliados em plantas que tiveram aumento na produção de auxina no estigma/estilete (plantas STIG1prom::iaaM), revelando que este gene não e regulado, a nível transcricional, por este hormônio. Experimentos de localização subcelular, realizados por expressão transitória da sequência de S/S_F-box fusionada a sequência dos genes repórteres GFP e YFP (S/S_F-box::GFP; S/S_F-box::YFP), indicaram que a proteína S/S_F-box esta localizada no citoplasma e no núcleo celular. Adicionalmente, foi realizado o screening de uma biblioteca de cDNAs de estigma/estilete, construída no sistema de duplo-hibrido, para investigar proteínas candidatas a interagirem com a proteína de S/S_F-box. Os resultados indicaram interação da proteína S/S_F-box com SKP1, confirmando a participação de S/S_F-box no complexo SCF, que promove a degradação de proteínas alvo pela via ubiquitina-proteassomo. Duas proteínas candidatas a alvo foram identificadas: os fatores de transcrição VOZ1 e SIP1, ambos envolvidos com a proliferação celular. Em suma, e possível propor que a proteína codificada por S/S_F-box tenha função relacionada a proliferação celular e ao desenvolvimento dos órgãos vegetais, incluindo o pistilo. / The study of sexual reproduction in plants is an area of increasing interest due to the importance of seeds and fruits in our daily diet, both resulting from the development of parts of the pistil, after fertilization. The aim of this study was to characterize a new F-box gene expressed in the N. tabacum pistil. F-box proteins act in protein-protein interactions, generally directing target proteins to degradation via ubiquitin-proteasome. Five genes of unknown function coding for putative F-box proteins were identified at two cDNAs libraries from N. tabacum stigmas/styles (DEPAOLI, 2006; QUIAPIM et al., 2009), previously constructed in our laboratory. The expression of each of these genes was analyzed in the different N. tabacum organs, by qRT-PCR. The 085H05 clone from the TOBEST library (QUIAPIM et al., 2009) showed preferential expression in floral organs. This clone was select for a more detailed functional characterization. The expression pattern of this gene was evaluated in the stigma/style during the 12 N. tabacum flower developmental stages (KOLTUNOW et al., 1990). The result revealed that its expression is regulated during development, reaching the highest expression level at anthesis (stage 12). It suggests that this gene is involved in the stigma/style development. The coding sequence of the gene corresponding to 085H05 was determined and, after amplification and cloning, the gene was named S/S_F-box (Stigma/Style_F-box). To understand the S/S_F-box protein function, transgenic plants either overexpressing or silencing (by RNAi) the S/S_F-box gene were generated. The RNAi plants showed reduced style and ovary when compared to the control SR1. In accordance, the overexpressing plants produced flowers with a style more elongated than the control, besides an ovary and a stigma of larger size. High concentrations of exudate were observed on the stigma surface of these plants, since the later stage 7. In the control SR1, equivalent concentrations are only observed at the later stages of development. The phenotypes observed in the transgenic plants suggest that the protein encoded by S/S_F-box is involved with pistil development and with the control of pistil size. Additionally, the RNAi plants showed the phenotype of loss of apical dominance. The expression levels of the S/S_F-box gene were evaluated in plants with increased auxin production in the stigma/style (plants STIG1prom::iaaM), showing that this gene is not transcriptionally regulated by this hormone. Subcellular localization experiments, carried out by transient expression of the S/S_F-box sequence fused to the reporter genes GFP and YFP V (S/S_F-box::GFP; S/S_F-box::YFP), showed that the S/S_F-box protein is localized in the cytoplasm and in the nucleus. Additionally, the screening of a stigma/style cDNA library constructed on the yeast two hybrid system was performed, to investigate candidate proteins for S/S_F-box protein interaction. The results indicated interaction between S/S_Fbox and the SKP1 protein, confirming the involvement of the S/S_F-box protein in the SCF complex, which promotes degradation of target proteins via ubiquitin-proteasome. Two candidates for target proteins were identified: the transcription factors VOZ1 and SIP1, both involved in cell proliferation. In summary, it is possible to propose that the protein encoded by S/S_F-box has functions related to cell proliferation and organ development, including the pistil.
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Caracterização de um Novo Gene da Família F-box Expresso no Pistilo de Nicotiana tabacum L. / Characterization of a New F-box Family Gene Expressed in the Nicotiana tabacum L. PistilAbbad, Samantha Vieira 13 August 2012 (has links)
O estudo da reprodução sexual de plantas e uma área de crescente interesse devido a importância de sementes e frutos em nossa dieta diária, ambos resultantes do desenvolvimento de partes do pistilo, apos fertilização. O objetivo deste trabalho foi caracterizar um novo gene F-box expresso no pistilo de N. tabacum. Proteínas F-box atuam na interação proteína-proteína, geralmente direcionando proteínas alvo para degradação pela via ubiquitina-proteassomo. Foram identificados cinco genes de função desconhecida que codificam putativas proteínas F-box, em duas bibliotecas de cDNAs de estigmas/estiletes de N. tabacum (DEPAOLI, 2006; QUIAPIM et al., 2009) previamente construídas em nosso laboratório. A expressão de cada um destes genes foi analisada nos diferentes órgãos de N. tabacum, por qRT-PCR. O clone 085H05 da biblioteca TOBEST (QUIAPIM et al., 2009) apresentou expressão preferencial nos órgãos florais. Este clone foi selecionado para uma caracterização funcional mais detalhada. O padrão de expressão deste gene foi avaliado no estigma/estilete durante os 12 estádios do desenvolvimento floral de N. tabacum (KOLTUNOW et al., 1990). O resultado revelou que sua expressão e regulada durante o desenvolvimento, atingindo o maior nível de expressão na antese (estádio 12). Isto sugere que este gene esteja envolvido no desenvolvimento do estigma/estilete. A sequência codificadora do gene correspondente a 085H05 foi determinada e, apos amplificação e clonagem, este gene foi denominado S/S_F-box (Stigma/Style_F-box). Para compreender a função da proteína de S/S_F-box, plantas transgênicas de superexpressao e de silenciamento (por RNAi) deste gene foram geradas. As plantas de RNAi apresentaram o estilete e o ovário reduzidos quando comparados ao controle SR1. Em concordância, as plantas de superexpressao produziram flores com o estilete mais alongado do que o controle, alem do estigma e do ovário de maior tamanho. Altas concentrações de exudato foram observadas na superfície do estigma destas plantas, a partir do estádio 7 tardio. No controle SR1, concentrações equivalentes apenas são observadas nos estádios finais do desenvolvimento. Os fenótipos observados nas plantas transgênicas sugerem que a proteína codificada por S/S_F-box esteja envolvida com o desenvolvimento do pistilo e com o controle do tamanho deste órgão. Adicionalmente, as plantas de RNAi apresentaram o fenótipo de perda da dominância apical. Os níveis de expressão do gene S/S_F-box foram avaliados em plantas que tiveram aumento na produção de auxina no estigma/estilete (plantas STIG1prom::iaaM), revelando que este gene não e regulado, a nível transcricional, por este hormônio. Experimentos de localização subcelular, realizados por expressão transitória da sequência de S/S_F-box fusionada a sequência dos genes repórteres GFP e YFP (S/S_F-box::GFP; S/S_F-box::YFP), indicaram que a proteína S/S_F-box esta localizada no citoplasma e no núcleo celular. Adicionalmente, foi realizado o screening de uma biblioteca de cDNAs de estigma/estilete, construída no sistema de duplo-hibrido, para investigar proteínas candidatas a interagirem com a proteína de S/S_F-box. Os resultados indicaram interação da proteína S/S_F-box com SKP1, confirmando a participação de S/S_F-box no complexo SCF, que promove a degradação de proteínas alvo pela via ubiquitina-proteassomo. Duas proteínas candidatas a alvo foram identificadas: os fatores de transcrição VOZ1 e SIP1, ambos envolvidos com a proliferação celular. Em suma, e possível propor que a proteína codificada por S/S_F-box tenha função relacionada a proliferação celular e ao desenvolvimento dos órgãos vegetais, incluindo o pistilo. / The study of sexual reproduction in plants is an area of increasing interest due to the importance of seeds and fruits in our daily diet, both resulting from the development of parts of the pistil, after fertilization. The aim of this study was to characterize a new F-box gene expressed in the N. tabacum pistil. F-box proteins act in protein-protein interactions, generally directing target proteins to degradation via ubiquitin-proteasome. Five genes of unknown function coding for putative F-box proteins were identified at two cDNAs libraries from N. tabacum stigmas/styles (DEPAOLI, 2006; QUIAPIM et al., 2009), previously constructed in our laboratory. The expression of each of these genes was analyzed in the different N. tabacum organs, by qRT-PCR. The 085H05 clone from the TOBEST library (QUIAPIM et al., 2009) showed preferential expression in floral organs. This clone was select for a more detailed functional characterization. The expression pattern of this gene was evaluated in the stigma/style during the 12 N. tabacum flower developmental stages (KOLTUNOW et al., 1990). The result revealed that its expression is regulated during development, reaching the highest expression level at anthesis (stage 12). It suggests that this gene is involved in the stigma/style development. The coding sequence of the gene corresponding to 085H05 was determined and, after amplification and cloning, the gene was named S/S_F-box (Stigma/Style_F-box). To understand the S/S_F-box protein function, transgenic plants either overexpressing or silencing (by RNAi) the S/S_F-box gene were generated. The RNAi plants showed reduced style and ovary when compared to the control SR1. In accordance, the overexpressing plants produced flowers with a style more elongated than the control, besides an ovary and a stigma of larger size. High concentrations of exudate were observed on the stigma surface of these plants, since the later stage 7. In the control SR1, equivalent concentrations are only observed at the later stages of development. The phenotypes observed in the transgenic plants suggest that the protein encoded by S/S_F-box is involved with pistil development and with the control of pistil size. Additionally, the RNAi plants showed the phenotype of loss of apical dominance. The expression levels of the S/S_F-box gene were evaluated in plants with increased auxin production in the stigma/style (plants STIG1prom::iaaM), showing that this gene is not transcriptionally regulated by this hormone. Subcellular localization experiments, carried out by transient expression of the S/S_F-box sequence fused to the reporter genes GFP and YFP V (S/S_F-box::GFP; S/S_F-box::YFP), showed that the S/S_F-box protein is localized in the cytoplasm and in the nucleus. Additionally, the screening of a stigma/style cDNA library constructed on the yeast two hybrid system was performed, to investigate candidate proteins for S/S_F-box protein interaction. The results indicated interaction between S/S_Fbox and the SKP1 protein, confirming the involvement of the S/S_F-box protein in the SCF complex, which promotes degradation of target proteins via ubiquitin-proteasome. Two candidates for target proteins were identified: the transcription factors VOZ1 and SIP1, both involved in cell proliferation. In summary, it is possible to propose that the protein encoded by S/S_F-box has functions related to cell proliferation and organ development, including the pistil.
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