Submitted by Rosivalda Pereira (mrs.pereira@ufma.br) on 2017-05-09T21:03:17Z No. of bitstreams: 1 SamaraSanches.pdf: 650430 bytes, checksum: 742a73a2790083fbb84ebdc7f396deef (MD5) / Made available in DSpace on 2017-05-09T21:03:17Z (GMT). No. of bitstreams: 1 SamaraSanches.pdf: 650430 bytes, checksum: 742a73a2790083fbb84ebdc7f396deef (MD5) Previous issue date: 2017-02-17 / Fundação de Amparo à Pesquisa e ao Desenvolvimento Científico e Tecnológico do Maranhão (FAPEMA) / The objective of this work was to evaluate the agronomic, anatomical and nutritional value of elephantgrass (Pennisetum purpureum Schum) at different cutting ages. A completely randomized design was used, with five replications and five treatments (cut ages) totaling 25 experimental units. For the anatomical characterization the 3x5 factorial arrangement, with three levels of insertion (LI) of the leaf and leaf sheath in the tiller (apical, medial and basal) and five cut ages (30, 45, 60, 75 and 90 days). Degradation of dry matter (DM) and crude protein (CP) was estimated by in situ technique using a Santa Inês sheep. Incubation times in the ruminal environment were 6, 12, 24, 72 and 96 hours. The experimental design was completely randomized, with a 5x5 factorial arrangement (five incubation times and five treatments). There was a significant (p <0.05) from the ages of cuts for total forage production (TFP), leaf production (LP), stem production (SP), dead material (DM), living tillers (LT), dead tillers (DT) and height (H).In relation to the bromatological composition, there was a significant effect (p <0.05), with the increase in the age of cut for dry matter (DM), neutral detergent fiber (NDF), acid detergent fiber (ADF) and ash in the two evaluated fractions (leaf and stem), the crude protein (CP) content showed a significant decrease according to the increase in the cutting age with 39.83% (leaf) and 26.97% (stem) From 30 to 90 days of age. There was only significant interaction (p <0.05) in the proportion of anatomical tissue of the leaf blade, for the xylem area (XIL), where it was observed in the lower cut ages (30 and 45 days) in the apical and medial NI The highest percentage of this structure 9.21 and 10.10%, respectively. For the sclerenchyma (SCL) area of the leaf sheath, a significant interaction was observed. The area occupied by the SCL increased with the increase in maturity. The degradation parameters of DM in the two evaluated fractions decreased significantly with the increase in plant maturity. The effective degradability of CP in the leaf and stem fractions decreased significantly with the increase in the rate of passage (2, 5 and 8% / h). The highest rate of degradation (c) of CP for leaf fraction was obtained at 60 days of age (9.47% / h), already at 45 days of age (6.81%/h). The agronomic, anatomical and nutritional characteristics of elephant grass are influenced by the increase in plant maturity. The use of grass at 60 days of age implies an optimum point of production and quality / Objetivou-se avaliar as características agronômicas, anatômicas e valor nutritivo do capim-elefante (Pennisetum purpureum Schum) em diferentes idades de corte. Utilizouse o delineamento inteiramente casualizado, com cinco repetições e cinco tratamentos (idades de corte) totalizando 25 unidades experimentais. Para a caracterização anatômica o arranjo fatorial foi 3x5, sendo três níveis de inserção (NI) da lâmina/bainha foliar no perfilho (apical, medial e basal) e cinco idades de corte (30, 45, 60, 75 e 90 dias). A degradação da matéria seca (MS) e da proteína bruta (PB) foi estimada pela técnica in situ, utilizando-se um ovino da raça santa Inês. Os tempos de incubações no ambiente ruminal foram 6, 12, 24, 72 e 96 horas. O delineamento experimental foi o inteiramente casualizado, com arranjo fatorial 5x5 (cinco tempos de incubação e cinco tratamentos). Houve efeito (P<0,05) das idades de cortes para a produção total de forragem (PTF), produção de folhas (PF), produção de colmo (PC), material morto (MM), perfilhos vivos (PV), perfilhos mortos (PM) e altura (H). Em relação à composição química houve efeito significativo (P<0,05), com o aumento na idade de corte para os teores de matéria seca (MS), fibra em detergente neutro (FDN), fibra em detergente ácido (FDA), celulose (CEL) e cinzas nas duas frações avaliadas (folha e colmo), o teor de proteína bruta (PB) apresentou decréscimo significativo de acordo com o aumento na idade de corte com 39,83% (folha) e 26,97% (colmo) dos 30 aos 90 dias de idade. Houve apenas interação significativa (P<0,05) na proporção de tecido anatômicos da lâmina foliar, para a área do xilema (XIL), em que observou-se nas menores idades de corte (30 e 45 dias) no NI apical e medial as maiores porcentagens dessa estrutura 9,21 e 10,10%, respectivamente. Para a área do esclerênquima (ESC), da bainha foliar, observou-se interação significativa. A área ocupada pelo ESC aumentou de acordo com o avanço na maturidade. Os parâmetros de degradação da MS nas duas frações avaliadas diminuíram significamente com o aumento na maturidade da planta. A degradabilidade efetiva da PB nas frações folha e colmo diminuíram significamente com o aumento na taxa de passagem (2, 5 e 8%/h). A maior taxa de degradação (c) da PB para fração folha foi obtida aos 60 dias de idade (9,47%/h), já para o colmo aos 45 dias de idade (6,81%/h). As características agronômicas, anatômicas e o valor nutritivo do capim-elefante são influenciados com o aumento na maturidade da planta. A utilização do capim aos 60 dias de idade de corte implica em um ponto ótimo de produção e qualidade.

ABSTRACT: Formation of organ shape is an intriguing yet largely unanswered question in developmental biology. Shapes arise as a result of tightly controlled spatial variation in the rates and directions of tissue expansion over the course of development; therefore, quantifying these growth patterns could provide information about the underlying mechanisms of morphogenesis. Here we present a novel technique and computational tools for quantifying growth and shape changes in developing leaves, with a few unique capabilities. This includes the ability to compute growth from three-dimensional (3D) coordinates, which makes this the first method suitable for studying leaf growth in species or mutants with non-flat leaves, as well as small leaves at early stages of development, and allows us to simultaneously capture 3D shape changes. In the following, we apply these methods to study growth and shape changes in the first rosette leaf of Arabidopsis thaliana. Results reveal clear spatiotemporal patterns in growth rates and directionality, and tissue deformation maps illustrate an intricate balance involved in maintaining a relatively flat leaf surface in wild type leaves. Semi-automated tools presented make a high throughput of data possible with this method, and algorithms for generating mean maps of growth will make it possible to perform standardized comparative analyses of growth patterns between wild type and mutants and/or between species. The methods presented in this thesis will therefore be useful for studying leaf growth and shape, to further investigate the mechanisms of morphogenesis.   RÉSUMÉ: Comment un organe acquiert sa forme particulière au cours du développement est une question intéressante mais largement non résolue. La forme d’un organe résulte de la façon dont les taux et directions de croissance de ses tissues varient dans l’espace et dans le temps. Quantifier les motifs de croissance est donc nécessaire pout élucider les mécanismes sous-jacents de la morphogenèse. Nous présentons ici une nouvelle méthodologie pour quantifier la croissance et les changements de forme dans les feuilles en développement. Cette méthodologie s’appuie sur le développement de nouvelles techniques expérimentales et de programmes informatiques, et présente des avantages uniques : la croissance de la surface des feuilles et le changement de forme peuvent être analysés en trois dimensions (3D), pour une longue période et de large déformations. De plus l’analyse de multiples échantillons permet de générer une cartographie moyenne des motifs de croissance à la surface des feuilles au cours de leur développement, ainsi qu’une description quantitative de la déformation des tissus sous l’effet de leur croissance. Dans cette thèse, nous présentons les résultats de croissance et de changements de forme de la première feuille de rosette d'Arabidopsis thaliana au cours de son développement. Les cartes moyennes de croissance révèlent des motifs spatio-temporels évidents tant pour les taux que pour les directions de croissance. De plus, la description de la déformation des tissus démontre l'équilibre complexe impliqué dans le maintien d'une surface relativement plane dans les feuilles. La méthode proposée et les logiciels associés permettra d’effectuer des analyses comparative de la croissance entre feuilles de type sauvage et feuilles de mutants aux formes altérées, afin d’élucider les mécanismes de la morphogenèse foliaire.

Field experiments were conducted in Kentucky and Louisiana in 2008 and 2009 (split-plot in a randomized complete block design with four replications) to investigate it is possible to simulate with manual defoliation the effect of soybean rust (SBR) (Phakopsora pachyrhizi Syd. and P. Syd) injury on a healthy soybean [Glycine max, (L.) Merr.] canopy, understand how defoliation affects the growth dynamics and canopy light interception, and if defoliation affectsleaf senescence and nitrogen remobilization during the seed-filling period. Two manual defoliation treatments based on changes in effective leaf area index (ELAI) (calculated as the reduction in leaf area equivalent to SBR-induced premature leaf abscission, loss in green leaf area, and reduction in photosynthetic capacity of diseased leaves) in infected canopies in Brazil were used to simulate SBR infection at growth stage R2 (full flowering) and R5 (beginning of seed-fill). Both defoliation treatments reduced yield in all experiments and the reduction was larger for the treatments at growth stage R2. The yield losses were equivalent to that observed in infected soybean canopies in Brazil. This suggests that a system of manual defoliation to simulate changes in effective leaf area duration shows promise as a tool to simulate the impact of SBR on soybean yield. The radiation use efficiency and crop growth rate from growth stage R2 to R5 were not influenced by defoliation. Defoliation started at growth stage R2 reduced seed number per unit area, while defoliation started at growth stage R5 reduced seed size due to shortening the seed-fill duration and a lower seed growth rate. There is no evidence that manual defoliation affected leaf senescence or nitrogen redistribution to the seed. This study found that the reduction of light interception by SBR was the main reason for the reductions in soybean growth and yield.

This dissertation presents a comprehensive study on the origin and evolutionary relationships of the species of Bursera in Cuba, Hispaniola, Jamaica and the Bahamas. The goals of the first chapter were to test monophyly of the group, revisit a recent transfer of two species of Bursera to Commiphora, and place recently discovered mainland species using the reconstructed phylogenies. Additionally, divergence estimations using fossils were used as independent tests of several hypotheses regarding the arrival of the modern biota to the Greater Antilles and Bahamas (GAB). I conclude that all endemic taxonomic entities of the genus in this region belong to Bursera subgen. Bursera but that two separate lineages colonized the GAB via dispersal. The genus diversified during the Middle Miocene to Pliocene, and the data corroborate several paleogeographic events during that interval. The second chapter presents informative characters from leaf anatomy and leaf architecture for the 14 endemic species of Bursera distributed in the GAB. There is evidence for some evolutionary tendencies in the group, among them a trend toward small, simple, amphistomatic and unifacial leaves, character states for which ecological correlates can now be studied. Morphological and anatomical evidence corroborates phylogenetic results in suggesting that a population of B. glauca in Cuba is a new species. Finally, the third chapter constitutes the first taxonomic account and description of all known endemic species of Bursera in the region and reflects the results of the previous chapters. The primary results are as follows: (1) a new species from eastern Cuba, B. yaterensis, is described; (2) five species of Commiphora are returned to Bursera; (3) B. nashii is treated as conspecific with B. glauca; and (4) B. ovata is treated as conspecific with B. trinitensis. A dichotomous key is provided using mostly vegetative characters due to the frequent lack of adequate reproductive material and the relative uniformity of most floral and fruit characters. Each species description includes leaf architecture (morphology and venation pattern) and anatomy, introducing characters that could and should be used for describing and distinguishing other Bursera in Meso- and South America as well as for African Commiphora.

ABSTRACT: Formation of organ shape is an intriguing yet largely unanswered question in developmental biology. Shapes arise as a result of tightly controlled spatial variation in the rates and directions of tissue expansion over the course of development; therefore, quantifying these growth patterns could provide information about the underlying mechanisms of morphogenesis. Here we present a novel technique and computational tools for quantifying growth and shape changes in developing leaves, with a few unique capabilities. This includes the ability to compute growth from three-dimensional (3D) coordinates, which makes this the first method suitable for studying leaf growth in species or mutants with non-flat leaves, as well as small leaves at early stages of development, and allows us to simultaneously capture 3D shape changes. In the following, we apply these methods to study growth and shape changes in the first rosette leaf of Arabidopsis thaliana. Results reveal clear spatiotemporal patterns in growth rates and directionality, and tissue deformation maps illustrate an intricate balance involved in maintaining a relatively flat leaf surface in wild type leaves. Semi-automated tools presented make a high throughput of data possible with this method, and algorithms for generating mean maps of growth will make it possible to perform standardized comparative analyses of growth patterns between wild type and mutants and/or between species. The methods presented in this thesis will therefore be useful for studying leaf growth and shape, to further investigate the mechanisms of morphogenesis.   RÉSUMÉ: Comment un organe acquiert sa forme particulière au cours du développement est une question intéressante mais largement non résolue. La forme d’un organe résulte de la façon dont les taux et directions de croissance de ses tissues varient dans l’espace et dans le temps. Quantifier les motifs de croissance est donc nécessaire pout élucider les mécanismes sous-jacents de la morphogenèse. Nous présentons ici une nouvelle méthodologie pour quantifier la croissance et les changements de forme dans les feuilles en développement. Cette méthodologie s’appuie sur le développement de nouvelles techniques expérimentales et de programmes informatiques, et présente des avantages uniques : la croissance de la surface des feuilles et le changement de forme peuvent être analysés en trois dimensions (3D), pour une longue période et de large déformations. De plus l’analyse de multiples échantillons permet de générer une cartographie moyenne des motifs de croissance à la surface des feuilles au cours de leur développement, ainsi qu’une description quantitative de la déformation des tissus sous l’effet de leur croissance. Dans cette thèse, nous présentons les résultats de croissance et de changements de forme de la première feuille de rosette d'Arabidopsis thaliana au cours de son développement. Les cartes moyennes de croissance révèlent des motifs spatio-temporels évidents tant pour les taux que pour les directions de croissance. De plus, la description de la déformation des tissus démontre l'équilibre complexe impliqué dans le maintien d'une surface relativement plane dans les feuilles. La méthode proposée et les logiciels associés permettra d’effectuer des analyses comparative de la croissance entre feuilles de type sauvage et feuilles de mutants aux formes altérées, afin d’élucider les mécanismes de la morphogenèse foliaire.

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Thesis (M.S.)--Miami University, Dept. of Botany, 2005. / Title from first page of PDF document. Document formatted into pages; contains [1], v, 38 p. : ill. Includes bibliographical references (p. 35-38).

Many systems for field-based, high-throughput phenotyping (FB-HTP) quantify and characterize the reflected radiation from the crop canopy to derive phenotypes, as well as infer plant function and health status. However, given the technology's nascent status, it remains unknown how biophysical and physiological properties of the plant canopy impact downstream interpretation and application of canopy reflectance data. In that light, we assessed relationships between leaf thickness and several canopy-associated traits, including normalized difference vegetation index (NDVI), which was collected via active reflectance sensors carried on a mobile FB-HTP system, carbon isotope discrimination (CID), and chlorophyll content. To investigate the relationships among traits, two distinct cotton populations, an upland (Gossypium hirsutum L.) recombinant inbred line (RIL) population of 95 lines and a Pima (G, barbaderise L.) population composed of 25 diverse cultivars, were evaluated under contrasting irrigation regimes, water-limited (WL) and well-watered pm conditions, across 3 years. We detected four quantitative trait loci (QTL) and significant variation in both populations for leaf thickness among genotypes as well as high estimates of broad-sense heritability (on average, above 0.7 for both populations), indicating a strong genetic basis for leaf thickness. Strong phenotypic correlations (maximum r = -0.73) were observed between leaf thickness and NDVI in the Pima population, but not the RIL population. Additionally, estimated genotypic correlations within the RIL population for leaf thickness with CID, chlorophyll content, and nitrogen discrimination (r(gij) = -0.32, 0.48, and 0.40, respectively) were all significant under WW but not WL conditions. Economically important fiber quality traits did not exhibit significant phenotypic or genotypic correlations with canopy traits. Overall, our results support considering variation in leaf thickness as a potential contributing factor to variation in NDVI or other canopy traits measured via proximal sensing, and as a trait that impacts fundamental physiological responses of plants.

ABSTRACT: Formation of organ shape is an intriguing yet largely unanswered question in developmental biology. Shapes arise as a result of tightly controlled spatial variation in the rates and directions of tissue expansion over the course of development; therefore, quantifying these growth patterns could provide information about the underlying mechanisms of morphogenesis. Here we present a novel technique and computational tools for quantifying growth and shape changes in developing leaves, with a few unique capabilities. This includes the ability to compute growth from three-dimensional (3D) coordinates, which makes this the first method suitable for studying leaf growth in species or mutants with non-flat leaves, as well as small leaves at early stages of development, and allows us to simultaneously capture 3D shape changes. In the following, we apply these methods to study growth and shape changes in the first rosette leaf of Arabidopsis thaliana. Results reveal clear spatiotemporal patterns in growth rates and directionality, and tissue deformation maps illustrate an intricate balance involved in maintaining a relatively flat leaf surface in wild type leaves. Semi-automated tools presented make a high throughput of data possible with this method, and algorithms for generating mean maps of growth will make it possible to perform standardized comparative analyses of growth patterns between wild type and mutants and/or between species. The methods presented in this thesis will therefore be useful for studying leaf growth and shape, to further investigate the mechanisms of morphogenesis.   RÉSUMÉ: Comment un organe acquiert sa forme particulière au cours du développement est une question intéressante mais largement non résolue. La forme d’un organe résulte de la façon dont les taux et directions de croissance de ses tissues varient dans l’espace et dans le temps. Quantifier les motifs de croissance est donc nécessaire pout élucider les mécanismes sous-jacents de la morphogenèse. Nous présentons ici une nouvelle méthodologie pour quantifier la croissance et les changements de forme dans les feuilles en développement. Cette méthodologie s’appuie sur le développement de nouvelles techniques expérimentales et de programmes informatiques, et présente des avantages uniques : la croissance de la surface des feuilles et le changement de forme peuvent être analysés en trois dimensions (3D), pour une longue période et de large déformations. De plus l’analyse de multiples échantillons permet de générer une cartographie moyenne des motifs de croissance à la surface des feuilles au cours de leur développement, ainsi qu’une description quantitative de la déformation des tissus sous l’effet de leur croissance. Dans cette thèse, nous présentons les résultats de croissance et de changements de forme de la première feuille de rosette d'Arabidopsis thaliana au cours de son développement. Les cartes moyennes de croissance révèlent des motifs spatio-temporels évidents tant pour les taux que pour les directions de croissance. De plus, la description de la déformation des tissus démontre l'équilibre complexe impliqué dans le maintien d'une surface relativement plane dans les feuilles. La méthode proposée et les logiciels associés permettra d’effectuer des analyses comparative de la croissance entre feuilles de type sauvage et feuilles de mutants aux formes altérées, afin d’élucider les mécanismes de la morphogenèse foliaire.

Popularmente conhecidas como flowering stones ou ice plants, as plantas da família Aizoaceae (Caryophyllales) caracterizam-se por suas folhas suculentas morfologicamente diversas. Com centro de origem no sul da África, a maior parte das espécies pertence a subfamília Ruschioidaeae, com plantas de folhas dorsiventrais, cilíndricas e trígonas, sendo marcante a ocorrência de conação entre as bases de folhas opostas, e a presença de feixes vasculares periféricos, com xilema endoscópico. Nosso estudo mostra que a formação dos feixes vasculares periféricos é posterior ao estabelecimento da blastozona marginal, e que tecidos da face abaxial diferenciam-se no domínio adaxial da folha durante a histogênese da lâmina. Sugerimos que um mecanismo de abaxialização foliar esteja vinculado à formação da margem foliar de Aizoaceae. O xilema dos feixes vasculares periféricos é formado wide band tracheids - \"wbts\", um tipo especializado de elemento traqueal com acentuado espessamento da parede secundária. \"Wbts\" vinculam-se a órgãos suculentos e ocorrem somente em Aizoaceae, Anacampserotaceae e Cactaceae, tendo despertado interesse dos pesquisadores quanto à sua origem e função. A partir de análises comparativas de anatomia, ultraestrutura e de imunomarcação de pectina, concluímos que a definição de \"wbts\" deve ser mantida nas famílias, no entanto, destacamos a possível ocorrência de idioblastos traqueoidais na região de medular de algumas espécies. Este trabalho contribui no conhecimento da anatomia e ontogênese foliar de Aizoaceae, abrindo oportunidades de estudos sobre os mecanismos envolvidos no estabelecimento da dorsiventralidade em folhas de simetria radial. A análise comparativa de wide-band tracheids \"wbts\" em Aizoaceae, Anacampserotaceae e Cactaceae traz contribuições ao conhecimento sobre sua distribuição e características nos diferentes órgãos / Popularly known as flowering stones or ice plants, the species of Aizoaceae (Caryophyllales) are characterized by morphologically diverse succulent leaves. With center of origin in Southern Africa, most species are classified in the subfamily Ruschioidaeae, which present dorsiventral, cylindrical and three-angled leaved plants, being remarkable the occurrence of conation between the bases of opposite leaves, and the presence of peripheral vascular bundles with endoscopyc xylem. Our study shows that the formation of peripheral vascular bundles occurs after the marginal blastozone establishment, and abaxial tissues differentiate in the adaxial domain of the leaf, during blade histogenesis. We suggest that an abaxialization mechanism is involved in the formation of leaf margins in Aizoaceae. The xylem of peripheral vascular bundles is composed by wide band tracheids - wbts, a specialized type of cell that occurs only in Aizoaceae, Cactaceae Anacampserotaceae. The origin and function of this cell type has been the subject of study by some researchers. By means of comparative analysis of anatomy, ultrastructure and pectin immunolabeling, we conclude that the definition of \"wbts\" should be kept in the three families; however, we highlight the possibility of idioblasts tracheids in the some cases. This work contributes to the knowledge of leaf anatomy and ontogenesis in Aizoaceae, opening opportunities for studies on the mechanisms involved in the establishment of dorsiventrality in leaves with radial symmetry. A comparative analysis of wbts in Aizoaceae, Cactaceae Anacampserotaceae brings contributions to knowledge about their distribution and characteristics in different organs