Introduction: L'étude des biomarqueurs a le potentiel de documenter sur les mécanismes sous-jacents de l'étiologie du cancer du poumon. Dans cette étude, nous avons étudié l’association entre la méthylation de l’ADN dans les gènes F2RL3 et AHRR et le cancer du poumon. Méthodes: Une étude cas-témoin avec échantillonnage cumulatif a été nichée dans la cohorte CARTaGENE. Les cas (N=187) se composent de tous les participants diagnostiqués avec un cancer du poumon incident entre le début de la cohorte (2009) et 2015 et qui avaient fourni un échantillon de sang; les témoins (N=378) ont été échantillonnés à la fin du suivi parmi les non-malades selon un appariement fréquentiel (2:1) pour l'âge, le sexe et le moment du prélèvement sanguin. Sequenom EpiTYPER® a été utilisé pour quantifier les niveaux de méthylation dans sept et 33 sites CpG de F2RL3 et AHRR, respectivement. Les rapports de méthylation de l'ADN sur tous les sites CpG individuels et en tant que mesure moyenne ont été paramétrés à la fois comme variables continues et catégorielles. Une régression logistique multivariable non conditionnelle a été utilisée pour estimer les rapports de cotes (OR) et les intervalles de confiance (IC) à 95 % de l’association entre la méthylation de F2RL3 et AHRR et le cancer du poumon tout en contrôlant les facteurs de confusion identifiés à l'aide de graphiques acycliques dirigés. Résultats: Une forte association inverse entre les niveaux moyens de méthylation de l'ADN et le cancer du poumon a été observée pour F2RL3 (OR par écart type (SD) de changement de méthylation = 0,65, IC à 95 %: 0,53-0,80) et AHRR (OR par SD de changement de méthylation = 0,66, IC à 95 %: 0,53 à 0,80). De même, les sites CpG individuels ont montré des ORs (par SD de changement de méthylation) allant de 0,61 à 0,70 pour six des sept sites CpG de F2RL3 et de 0,57 à 0,79 pour 17 des 33 sites CpG de AHRR. Les sites CpG restants de F2RL3 et AHRR n'ont montré aucune association avec le risque de cancer du poumon, à l'exception d'un site CpG dans AHRR (chr5:369774) qui avait un OR de 1,25 (IC à 95 %: 1,02-1,54). Conclusion : Ces résultats confirment le rôle des mécanismes épigénétiques dans l'étiologie du cancer du poumon. / Background: The study of biomarkers has the potential to inform on underlying mechanisms in lung cancer etiology. In this study, we investigated DNA methylation in the F2RL3 and AHRR genes, and lung cancer risk. Methods: A case-control study with cumulative sampling was nested in the CARTaGENE cohort. Cases (N=187) consisted of all participants diagnosed with incident lung cancer from baseline to 2015 and who had provided a blood sample; controls (N=378) were sampled at a ratio of 2:1 with frequency-matching by age, sex, and timing of blood sampling. Sequenom EpiTYPER® was used to quantify methylation levels in seven and 33 CpG sites of F2RL3 and AHRR, respectively. DNA methylation ratios across all individual CpG sites and as an average measure were parametrized both as continuous and categorical variables. Unconditional multivariable logistic regression was used to estimate odds ratios (ORs) and 95% confidence intervals (CI) for lung cancer associated with F2RL3 and AHRR methylation while controlling for confounders identified using directed acyclic graphs. Results: A strong inverse relationship between average DNA methylation levels and lung cancer was observed for both F2RL3 (OR per standard deviation (s.d.) in methylation change = 0.65, 95% CI: 0.53-0.80) and AHRR (OR per s.d. in methylation change = 0.66, 95% CI: 0.53-0.80). Similarly, ORs for individual CpG sites (per s.d. in methylation change) ranged from 0.61-0.70 for six out of the seven CpG sites of F2RL3 and from 0.57-0.79 for 17 out of 33 CpG sites of AHRR. The methylation levels of the remaining CpG sites within F2RL3 and AHRR were not associated with lung cancer risk, except for one CpG site within AHRR (chr5:369774) which had an OR of 1.25 (95% CI: 1.02-1.54). Conclusion: These findings support the role of epigenetic mechanisms in lung cancer etiology.

INTRODUÇÃO: O Sarcoma de Kaposi (SK) é a neoplasia mais frequente dos doentes com Aids. É causada pelo herpes-vírus 8 (HHV-8). As células dendríticas plasmocitóides (CDp) são especializadas na produção de interferon tipo 1 e participam da resposta imune aos vírus. Os receptores \"toll-like\" são os principais receptores de reconhecimento de padrão, sendo que os receptores toll-like (TLR) 3 e 9 têm função no reconhecimento de vírus. O D2-40 é o anticorpo que reconhece a podoplanina, uma proteína transmembrana, presente no endotélio linfático e que tem função na imunidade. OBJETIVO: Demonstrar e comparar os componentes da imunidade inata: CDp e TLR 3 e 9, nas lesões cutâneas de SK associado a Aids e esporádico. Identificar a presença do HHV-8 nas CDp. Verificar o componente endotelial linfático na progressão das lesões de SK e comparar a expressão dos elementos da imunidade inata estudados, nas lesões com menor e maior componente endotelial linfático. MÉTODOS: Estudo retrospectivo de 50 biopsias de pacientes com diagnóstico de SK, todos com comprovação pelo exame histopatológico e demonstração do antígeno nuclear associado à latência (LANA) do HHV-8. Foram avaliados 11 biopsias de SK da forma clássica (SKc), 22 lesões de doentes com Aids (SK-Aids) e de 17 de doentes com Aids submetidos a tratamento com terapia antirretroviral altamente eficaz (SK-Aids/HAART). Os espécimes foram submetidos a exame por técnica imuno-histoquímica para evidenciar a presença de CDp (anticorpo CD303/BDCA-2), a expressão de TLR 3 e 9, bem como de podoplanina (anticorpo D2-40). Foi realizada também técnica de dupla marcação com CD303 e LANA, objetivando a identificação de CDp infectadas pelo HHV-8.Vinte e três espécimes de granuloma piogênico constituíram o grupo controle. A população de CDp e expressão de TLR 3 e TLR 9 também foi comparada nas lesões cutâneas de SK de doentes com e sem comprometimento visceral pela neoplasia; lesões não tumorais (máculo-papulares/placas) foram comparadas às lesões tumorais (nodulares) e de acordo com níveis sanguíneos de linfócitos T CD4+ (menor e igual ou maior que 350 células/mm3). RESULTADOS: As CDp foram mais numerosas nos espécimes de SK-Aids quando comparado com o granuloma piogênico. Foram identificadas CDp infectadas pelo HHV-8. A expressão de TLR 3 foi menor nas lesões de SK, independente da forma epidemiológica, do que no granuloma piogênico. Para todas as outras comparações da densidade de CDp e expressão de TLR 3 e de TLR 9 não houve diferença entre os grupos. Não houve diferença no componente endotelial linfático das lesões máculo-papulares/placas e tumorais do SK, assim como na expressão dos elementos da imunidade inata estudados entre as lesões com maior e menor componente endotelial linfático. CONCLUSÕES: Demonstrou-se pela primeira vez a presença de CDp e a expressão de TLR 3 e 9 em lesões cutâneas do Sarcoma de Kaposi, bem como a infecção de CDp pelo HHV-8 \"in situ\" nos tumores. Os resultados obtidos sugerem a participação das células CDp e do TLR 3 na patogênese das lesões cutâneas do Sarcoma de Kaposi, independente da presença do vírus da imunodeficiência humana. A imunomarcação de SK com o anticorpo D2-40, tanto nas fases precoce como tardia das lesões, confirma a natureza endotelial linfática das células neoplásicas. Esta parece não ter relação com a expressão dos elementos da imunidade inata estudados / Introduction: Kaposi\'s sarcoma (KS) is the most common Aids-associated malignancy. It is caused by human herpesvirus-8. Plasmacytoid dendritic cells (pDC) are professional interferon producing cells, and participate in the immune response against viruses. Toll-like receptors (TLR) are the main pattern recognition receptors, and TLR 3 and TLR 9 participate in the recognition of viruses. Podoplanin, recognized by antibody D2-40, is a transmembrane protein identified on lymphatic endothelial cells with functions inimmunity. Objective: Demonstrate and compare some innate immunity components: pDC, TLR 3 and TLR 9, in cutaneous lesions of Aids-associated Kaposi\'s sarcoma and classic Kaposi\'s sarcoma. Identify the infection of pDC by HHV-8. Compare the lymphatic endothelial component in the course of tumor progression and compare the expression of innate immunity elements in lesions with a predominance of lymphatic endothelial components or not. Methods: Retrospective study of 50 biopsies diagnosed as Kaposi\'s sarcoma withpositive staining for latency-associated nuclear antigen (LANA) of HHV-8. Eleven classic KS, 22 Aids-associated KS and 17 Aids-associated KS from patients undergoing highly active antiretroviral therapy (HAART) were assessed. Paraffinembedded tissue was submitted to immunohistochemistry technique in order to demonstrate pDC (CD303/BDCA-2 antibody), expression of TLR 3, TLR 9 and podoplanin (D2-40 antibody). We performed double staining with CD303 and LANA in order to identify pDC infection with HHV-8. Twenty-three pyogenic granuloma(PG) specimens were analyzed as a control group. Plasmacytoid dendritic cells population, TLR 3 and TLR 9 expressions were compared between patients with and without visceral disease, nodular stageandpatch/plaque stage and according to bloodlymphocytes T CD4 count(=350 cells/mm3). Results: Plasmacytoid dendritic cells density in Aids-associated SK was higher than in PG. We could identify pDC infection by HHV-8. The expression of TLR 3 in all forms of KS was less extensive than PG. All others comparisons about pDC density, TLR 3 and 9expressions were similar. We found no difference in D2-40 expression between nodular and patch/plaque stages. When comparing tumors with extensive expression of D2-40 (>= 50% of cells) and tumors with less expression (<50% of cells), we found no differences in density of pDC and expression of TLR 3 and TLR 9. Conclusion: This is the first time that pDC, TLR 3 and TLR 9 have been demonstrated in skin lesions of KS, as well as the infection of pDC in the lesions. Our results suggest that pDC and TLR 3 participate in the pathogenesis of KS, independently of HIV presence. The positive staining with D2-40 antibody, in all the stages of KS, confirmsthe lymphatic nature of neoplastic cells. It seems that podoplanin is not related to the innate immunity elements studied here

INTRODUÇÃO: O Sarcoma de Kaposi (SK) é a neoplasia mais frequente dos doentes com Aids. É causada pelo herpes-vírus 8 (HHV-8). As células dendríticas plasmocitóides (CDp) são especializadas na produção de interferon tipo 1 e participam da resposta imune aos vírus. Os receptores \"toll-like\" são os principais receptores de reconhecimento de padrão, sendo que os receptores toll-like (TLR) 3 e 9 têm função no reconhecimento de vírus. O D2-40 é o anticorpo que reconhece a podoplanina, uma proteína transmembrana, presente no endotélio linfático e que tem função na imunidade. OBJETIVO: Demonstrar e comparar os componentes da imunidade inata: CDp e TLR 3 e 9, nas lesões cutâneas de SK associado a Aids e esporádico. Identificar a presença do HHV-8 nas CDp. Verificar o componente endotelial linfático na progressão das lesões de SK e comparar a expressão dos elementos da imunidade inata estudados, nas lesões com menor e maior componente endotelial linfático. MÉTODOS: Estudo retrospectivo de 50 biopsias de pacientes com diagnóstico de SK, todos com comprovação pelo exame histopatológico e demonstração do antígeno nuclear associado à latência (LANA) do HHV-8. Foram avaliados 11 biopsias de SK da forma clássica (SKc), 22 lesões de doentes com Aids (SK-Aids) e de 17 de doentes com Aids submetidos a tratamento com terapia antirretroviral altamente eficaz (SK-Aids/HAART). Os espécimes foram submetidos a exame por técnica imuno-histoquímica para evidenciar a presença de CDp (anticorpo CD303/BDCA-2), a expressão de TLR 3 e 9, bem como de podoplanina (anticorpo D2-40). Foi realizada também técnica de dupla marcação com CD303 e LANA, objetivando a identificação de CDp infectadas pelo HHV-8.Vinte e três espécimes de granuloma piogênico constituíram o grupo controle. A população de CDp e expressão de TLR 3 e TLR 9 também foi comparada nas lesões cutâneas de SK de doentes com e sem comprometimento visceral pela neoplasia; lesões não tumorais (máculo-papulares/placas) foram comparadas às lesões tumorais (nodulares) e de acordo com níveis sanguíneos de linfócitos T CD4+ (menor e igual ou maior que 350 células/mm3). RESULTADOS: As CDp foram mais numerosas nos espécimes de SK-Aids quando comparado com o granuloma piogênico. Foram identificadas CDp infectadas pelo HHV-8. A expressão de TLR 3 foi menor nas lesões de SK, independente da forma epidemiológica, do que no granuloma piogênico. Para todas as outras comparações da densidade de CDp e expressão de TLR 3 e de TLR 9 não houve diferença entre os grupos. Não houve diferença no componente endotelial linfático das lesões máculo-papulares/placas e tumorais do SK, assim como na expressão dos elementos da imunidade inata estudados entre as lesões com maior e menor componente endotelial linfático. CONCLUSÕES: Demonstrou-se pela primeira vez a presença de CDp e a expressão de TLR 3 e 9 em lesões cutâneas do Sarcoma de Kaposi, bem como a infecção de CDp pelo HHV-8 \"in situ\" nos tumores. Os resultados obtidos sugerem a participação das células CDp e do TLR 3 na patogênese das lesões cutâneas do Sarcoma de Kaposi, independente da presença do vírus da imunodeficiência humana. A imunomarcação de SK com o anticorpo D2-40, tanto nas fases precoce como tardia das lesões, confirma a natureza endotelial linfática das células neoplásicas. Esta parece não ter relação com a expressão dos elementos da imunidade inata estudados / Introduction: Kaposi\'s sarcoma (KS) is the most common Aids-associated malignancy. It is caused by human herpesvirus-8. Plasmacytoid dendritic cells (pDC) are professional interferon producing cells, and participate in the immune response against viruses. Toll-like receptors (TLR) are the main pattern recognition receptors, and TLR 3 and TLR 9 participate in the recognition of viruses. Podoplanin, recognized by antibody D2-40, is a transmembrane protein identified on lymphatic endothelial cells with functions inimmunity. Objective: Demonstrate and compare some innate immunity components: pDC, TLR 3 and TLR 9, in cutaneous lesions of Aids-associated Kaposi\'s sarcoma and classic Kaposi\'s sarcoma. Identify the infection of pDC by HHV-8. Compare the lymphatic endothelial component in the course of tumor progression and compare the expression of innate immunity elements in lesions with a predominance of lymphatic endothelial components or not. Methods: Retrospective study of 50 biopsies diagnosed as Kaposi\'s sarcoma withpositive staining for latency-associated nuclear antigen (LANA) of HHV-8. Eleven classic KS, 22 Aids-associated KS and 17 Aids-associated KS from patients undergoing highly active antiretroviral therapy (HAART) were assessed. Paraffinembedded tissue was submitted to immunohistochemistry technique in order to demonstrate pDC (CD303/BDCA-2 antibody), expression of TLR 3, TLR 9 and podoplanin (D2-40 antibody). We performed double staining with CD303 and LANA in order to identify pDC infection with HHV-8. Twenty-three pyogenic granuloma(PG) specimens were analyzed as a control group. Plasmacytoid dendritic cells population, TLR 3 and TLR 9 expressions were compared between patients with and without visceral disease, nodular stageandpatch/plaque stage and according to bloodlymphocytes T CD4 count(=350 cells/mm3). Results: Plasmacytoid dendritic cells density in Aids-associated SK was higher than in PG. We could identify pDC infection by HHV-8. The expression of TLR 3 in all forms of KS was less extensive than PG. All others comparisons about pDC density, TLR 3 and 9expressions were similar. We found no difference in D2-40 expression between nodular and patch/plaque stages. When comparing tumors with extensive expression of D2-40 (>= 50% of cells) and tumors with less expression (<50% of cells), we found no differences in density of pDC and expression of TLR 3 and TLR 9. Conclusion: This is the first time that pDC, TLR 3 and TLR 9 have been demonstrated in skin lesions of KS, as well as the infection of pDC in the lesions. Our results suggest that pDC and TLR 3 participate in the pathogenesis of KS, independently of HIV presence. The positive staining with D2-40 antibody, in all the stages of KS, confirmsthe lymphatic nature of neoplastic cells. It seems that podoplanin is not related to the innate immunity elements studied here

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Contexte. Les carcinomes des voies aérodigestives supérieures (VADS) arrivent en 6ème position parmi les cancers les plus fréquents au niveau mondial. La fonction du récepteur TLR3 dans les cellules de carcinomes des VADS est encore très mal comprise. Objectifs et méthodes. 1) Déterminer le niveau d’expression du récepteur TLR3 dans les lignées et les biopsies de carcinomes des VADS par western blot et par immunohistochimie. 2) Etudier le rôle de TLR3 dans la croissance tumorale de ces tumeurs, en utilisant notamment des lignées invalidées de façon conditionnelle pour TLR3. 3) Evaluer in vitro les effets cytotoxiques de ligands artificiels de TLR3 soit seuls, soit utilisés en combinaisons avec un inhibiteur d’IAP (inhibitor of apoptosis protein).Résultats. La protéine TLR3 est détectée à un niveau élevé en western blot dans les lignées de carcinomes des VADS étudiées, comparativement à un panel d’autres tumeurs épithéliales humaines. TLR3 est également constamment détecté en immunohistochimie dans les biopsies. TLR3 semble jouer un rôle dans la croissance tumorale des carcinomes des VADS : dans certaines conditions de culture (culture en hypoxie ou en milieu pauvre en SVF et en nutriments), la stimulation de TLR3 par un ligand exogène, le poly(A:U), favorise la croissance des cellules tumorales. Nous avons étudié l’effet de la stimulation de TLR3 sur le métabolisme glucidique dans ces mêmes cellules en utilisant un appareil de type Seahorse® qui mesure la consommation d’oxygène et la production de protons à partir de cellules cultivées en microplaques. Ces expériences montrent que la stimulation de TLR3 fait augmenter l’activité des voies du métabolisme cellulaire anaérobie (glycolyse extra-mitochondriale). Une étude métabolomique a mis en évidence des différences significatives dans le profil métabolique des cellules tumorales stimulées par le poly(A:U) comparativement aux cellules non traitées. Par ailleurs, nous avons montré que la stimulation de TLR3 permettait de détecter le facteur de transcription HIF1 en Western blot, même en conditions normoxiques. Sachant que des ARN libérés par des cellules en état de nécrose peuvent stimuler TLR3, il est tentant de penser que ce récepteur pourrait favoriser la survie des cellules malignes en zone hypoxique au voisinage de cellules nécrotiques. Néanmoins, l’expression de TLR3 représente aussi un facteur de vulnérabilité pour les cellules de carcinome des VADS : en effet les ligands artificiels de TLR3 utilisés en combinaison avec un inhibiteur d’IAP (Inhibitor of Apoptosis Protein) produisent des effets cytotoxiques sur les lignées de carcinomes des VADS étudiées. / Background. Head and Neck (HN) carcinomas are the 6th most frequent type of cancer worldwide. The role of the TLR3 receptor in HN carcinomas remains poorly understood.Objectives and Methods. 1) To assess the expression level of TLR3 in HN carcinoma cell lines and biopsies by Western blot and immunohistochemistry, respectively. 2) To study the role of TLR3 in tumour growth using specific cell lines with conditional knock-down of TLR3. 3). To assess in vitro the cytotoxic effects of artificial ligands of TLR3 used either alone or in combination with an IAP (inhibitor of apoptosis protein) inhibitor.Results. TLR3 protein was detected at a high level by Western blot analysis in HN carcinoma cell lines, by comparison with a panel of other human epithelial cancer cell lines. TLR3 was also consistently detected by immunohistochemistry in tumour biopsies. TLR3 seem to play a role in HN carcinoma cell growth: under certain culture conditions (hypoxic or low fetal calf serum/low nutrient culture conditions), TLR3 stimulation by a synthetic ligand, the poly(A:U), favours tumour cell growth. We investigated the effects of TLR3 stimulation on glucose metabolism using a Seahorse® analyzer, which measures the oxygen consumption and the proton production in living cells. Our results indicate that TLR3 stimulation induces an increase in anaerobic metabolism (extra-mitochondrial glycolysis). A metabolomic study revealed significant changes in the metabolic profile of cancer cells treated by poly(A:U) by comparison with untreated cells. We also showed that under TLR3 stimulation, HIF1 became detectable by Western blot analysis, even in normoxia. Given the fact that RNA fragments released by dying cells are able to trigger TLR3, one can assume that TLR3 might favour cancer cell survival in hypoxic areas located near the necrotic core of the tumour. However, TLR3 expression is also a factor of vulnerability for HN carcinoma cells: indeed, the combination of TLR3 artificial ligands with an IAP inhibitor has a strong cytotoxic effect on HN carcinoma cells in vitro.