京都大学 / 0048 / 新制・課程博士 / 博士(農学) / 甲第20448号 / 農博第2233号 / 新制||農||1050(附属図書館) / 学位論文||H29||N5069(農学部図書室) / 京都大学大学院農学研究科森林科学専攻 / (主査)教授 神﨑 護, 教授 北島 薫, 教授 柴田 昌三 / 学位規則第4条第1項該当 / Doctor of Agricultural Science / Kyoto University / DGAM

Le delta du Rhône est une vaste plaine alluviale recouverte d’étangs et de lagunes, parsemée de cultures diverses, principalement du riz (21’100 ha en 2009, Centre Français du Riz, 2010). Des herbicides répandus en avril (pré levée, prétilachlor) et en juin (poste levée, bentazone ; MCPA et dichlorprop) sont utilisés dans la riziculture pour lutter contre les mauvaises herbes. L’étang de Vaccarès, qui est classé «réserve de biosphère» par l’UNESCO pour sa grande richesse biologique reçoit des pesticides directement issus des rizières par les canaux de drainage. D’un point de vue scientifique, peu d’études sont consacrées au devenir des pesticides dans les eaux estuariennes. En outre, la plupart de ces études ont été focalisées sur la photochimie bien que la biodégradation soit impliqué dans l’atténuation des pesticides. Alors le but de ce travail de thèse est de comprendre le devenir des herbicides de riziculture en évaluant le rôle de la photochimie direct et indirect et de la biodégradation. Nous avons développé donc un modèle capable de décrire la transformation de molécules organique par la voie photochimique dans les eaux estuariennes. Enfin nous avons déterminé les processus principaux impliqués dans l'atténuation rapide des herbicides de riziculture en Camargue. / The Ile de Camargue basin is the central part of the Rhône Delta in the south of France included between the two branches of the river. The higher parts of this area are agricultural lands, mainly rice fields, whereas the lower parts are lagoons and natural wetlands of international importance for biodiversity preservation.Bentazone, dichlorprop, and MCPA are post-emerging herbicides applied in rice fields from mid April to mid June. Rice fields grown under flooded conditions represent an environment where these conditions increase the potential for pesticides to transport in runoff from rice fields to non- target surface waters.To predict their fate in the surface waters of the Camargue and to asses their risk, it is necessary to understand their chemical reaction under environmental conditions.Reactive photoinduced species (RPS, hydroxyl radical HO., singlet oxygen 1O2 and dissolved organic matter triplet state) in estuarine waters (Vaccarès lagoon) were characterized experimentally to estimate the role of photochemistry in rice paddy. We then developed a kinetic model describing the solar photo-transformation of xenobiotic organic compounds induced by the three different photooxidants RPS. Sunlight photodegradation of bentazone, dichlorprop (DCPP), MCPA and alachlor (used as a surrogate for the similar Pretilachlor, pre-emergence herbicide) and microbial transformation were conducted experimentally to estimate near-surface half-lives in surface water. Parallel to the experimental study, an assessment of the elimination rates of those herbicides by sorption and sedimentation, and volatilization were obtained by the model MASAS (Modelling of Anthropogenic Substances in Aquatic Systems).The half-lives of the herbicides obtained experimentally were then compared with those obtained from field data. This allowed to assessing the main processes involved in the attenuation of herbicide concentrations.

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京都大学 / 新制・課程博士 / 博士(農学) / 甲第24913号 / 農博第2576号 / 新制||農||1103(附属図書館) / 京都大学大学院農学研究科地域環境科学専攻 / (主査)教授 飯田 訓久, 教授 近藤 直, 教授 野口 良造 / 学位規則第4条第1項該当 / Doctor of Agricultural Science / Kyoto University / DFAM

Submitted by William Justo Figueiro (williamjf) on 2015-07-06T23:27:47Z No. of bitstreams: 1 09a.pdf: 771261 bytes, checksum: c8d36f36fd0e9b6396c5bad8e1ea3681 (MD5) / Made available in DSpace on 2015-07-06T23:27:47Z (GMT). No. of bitstreams: 1 09a.pdf: 771261 bytes, checksum: c8d36f36fd0e9b6396c5bad8e1ea3681 (MD5) Previous issue date: 2014 / CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / UNISINOS - Universidade do Vale do Rio dos Sinos / Microrganismos vivendo no interior dos tecidos das plantas sem causar efeitos prejudiciais visíveis de sua presença são chamados endofíticos. As bactérias endofíticas podem promover o crescimento das plantas de várias maneiras: através da secreção de reguladores de crescimento vegetal, pela solubilização de fosfato, entre outras. Na busca de práticas agrícolas ambientalmente sustentáveis, tem sido dada considerável atenção à fixação biológica de nitrogênio atmosférico. Assim, o objetivo do presente estudo foi avaliar, através de métodos dependentes de cultivo, a ocorrência de bactérias endofíticas em colmos e folhas de duas amostras das variedades “RG 121” e “RG 900” de arroz irrigado, num sistema de cultivo convencional. Foram coletadas plantas de arroz de duas variedades na Estação Experimental do Arroz, do Instituto Rio Grandense do Arroz (EEA-IRGA), Cachoeirinha/RS, no ano agrícola 2012/2013. As plantas coletadas em campo foram submetidas à desinfecção superficial, seguida do isolamento e cultivo das bactérias endofíticas em meios de cultura semi-sólidos, livres de nitrogênio: NFb (Azospirillum brasilense/A. lipoferum), JNFb (Herbaspirillum seropedicae/H. rubrisubalbicans) e LGI-P (Gluconacetobacter diazotrophicus). Ao final desses procedimentos, foram obtidos 190 isolados bacterianos, os quais agruparam-se, de acordo com suas características fenotípicas, em 29 morfotipos. A partir disso, o padrão de distribuição dos morfotipos entre oito condições foi avaliado por Análise de Correspondência Destendenciada (DCA). As oito condições foram: C1 = amostra (planta) 1, variedade “RG 121”, colmos; C2 = amostra 1, variedade “RG 121”, folhas; C3 = amostra 1, variedade “RG 900”, colmos; C4 = amostra 1, variedade “RG 900”, folhas; C5 = amostra (planta) 2, variedade “RG 121”, colmos; C6 = amostra 2, variedade “RG 121”, folhas; C7 = amostra 2, variedade “RG 900”, colmos; C8 = amostra 2, variedade “RG 900”, folhas. Os dois primeiros eixos da DCA explicaram 28,5 % da variância total do conjunto de dados - 23,9 % de explicação somente pelo eixo 1. Ainda, foi realizada uma Análise de Componentes Principais (PCA) na tentativa de estabelecer quais morfotipos melhor explicam as diferenças observadas entre as condições. Deste modo, os eixos 1 e 2 da PCA tiveram uma proporção de explicação acumulada correspondente a 45,61 %, sendo o eixo 1 responsável por 25,91 % destes. Por fim, em função do número de isolados obtidos por grupo fenotípico, pôde-se calcular o índice de diversidade de Shannon-Weaver (H’), que relaciona a riqueza e uniformidade de espécies (morfotipos) para cada área (condição) em estudo. Estes foram testados par-a-par pelos métodos de bootstrapping e permutação quanto a possíveis diferenças significativas. De modo que valores de H’ estatisticamente diferentes apresentados por algumas das combinações de condições puderam ser relacionados à amostra (planta), à estrutura vegetal (colmos e folhas) e à variedade, isolada ou conjuntamente. O crescimento bacteriano em meios de cultura livres de nitrogênio, em condições microaerofílicas, infere a ocorrência da capacidade de fixação biológica de nitrogênio. / Microorganisms living within the tissues of plants without causing visible detrimental effects of their presence are known as endophytes. The endophytic bacteria can promote plant growth in various ways: by secreting plant growth regulators, by phosphate solubilization, among others. In pursuit of environmentally sustainable agricultural practices, considerable attention has been given to the biological nitrogen fixation. Thus, the aim of this study was to evaluate, by culture-dependent methods, the occurrence of endophytic bacteria in stems and leaves of two samples of varieties “RG 121” e “RG 900” of irrigated rice, on a conventional cropping system. Rice plants from two varieties were collected in the Estação Experimental do Arroz, from Instituto Riograndense do Arroz (EEA-IRGA), Cachoeirinha/RS, in the agricultural year 2012/2013. Plants collected in the field were submitted to surface disinfection, followed by isolation and cultivation of endophytic bacteria in semisolid, nitrogen-free, culture media: NFb (Azospirillum brasilense/A. lipoferum), JNFb (Herbaspirillum seropedicae/H. rubrisubalbicans) and LGI-P (Gluconacetobacter diazotrophicus). At the end of these procedures, 190 bacterial isolates were obtained, which were grouped, according to their phenotypic characteristics, in 29 morphotypes. From this, the pattern of distribution of morphotypes in eight conditions was assessed by Detrended Correspondence Analysis (DCA). The eight conditions were: C1 = sample (plant) 1, variety "RG 121", stems; C2 = sample 1, variety "RG 121", leaves; C3 = sample 1, variety "RG 900", stems; C4 = sample 1, variety "RG 900", leaves; C5 = sample (plant) 2, variety "RG 121", stems; C6 = sample 2, variety "RG 121", leaves; C7 = sample 2, variety "RG 900", stems; C8 = sample 2, variety "RG 900", leaves. The first two axes of DCA explained 28.5 % of the total variance of the data set - 23.9 % of explanation only by axis 1. In addition, a Principal Components Analysis (PCA) was performed in attempt to establish which morphotypes best explain the observed differences between the conditions. Thus, the axes 1 and 2 of the PCA had a proportion of accumulated explanation corresponding to 45.61 %, being the axis 1 responsible for 25.91 % of them. Finally, according to the number of isolates obtained by phenotypic group, the Shannon-Weaver diversity index (H’) were calculated, which relates the richness and evenness of species (morphotypes) for each area (condition) in study. These were tested pair-to-pair by bootstrapping and permutation methods for possible significant differences. Thus, statistically different values of H' presented by some of the combinations of conditions could be related to the sample (plant), plant structure (stems and leaves) and variety, individually or together. The bacterial growth in nitrogen-free culture media, under microaerophilic conditions, implies the occurrence of biological nitrogen fixation capacity.

科学研究費補助金 研究種目:一般研究(B) 課題番号:05454067 研究代表者:木村 真人 研究期間:1993-1994年度

名古屋大学年代測定総合研究センターシンポジウム報告

科学研究費補助金 研究種目:基盤研究(C)(2) 課題番号:14560051 研究代表者:浅川 晋 研究期間:2002-2003年度

科学研究費補助金 研究種目:基盤研究(B)(2) 課題番号:08458144 研究代表者:飯田 孝夫 研究期間:1996-1997年度