During embryonic development, precursor germ cells contain aggregates of protein and RNA known as germ granules. These germ granules are important in the specifi- cation of a functioning germ line, i.e. functioning sex cells within mature organisms. In the single cell fertilized embryo of the nematode worm C.elegans, germ granules (referred to as P granules) localize to the posterior side of the cell. After cell division occurs, they are found only in the posterior daughter cell. The localization behav- ior of P granules has been a topic of much interest, and considered an important aspect of symmetry breaking during development. We learn the fundamental prop- erties of P granule localization, and determine possible parameters and features of this biological system by developing theory in close collaboration with experimental evidence. In this study, experimental evidence is presented which shows that P granules are liquid droplets, and that their localization occurs through preferential nucleation and growth behavior on one side of the cell and simultaneous preferential dissolution on the opposite side. It is also shown that this behavior is linked to the concentration gradient of the protein Mex-5 along the anterio-posterior axis of the cell, which is necessary to induce the preferential growth of P granules. From this experimental data, a theoretical model for the preferential growth of P granules is developed, where the localization of P granules occurs by phase separa- tion. That is, P granules separate from the bulk cytoplasm by a process described by a first order liquid-liquid phase transitition, where a liquid droplet granule phase nucleates and then grows out of the bulk liquid cytoplasmic phase. In this model, a spatial gradient is imposed on the saturation point, the boundary point between the single phase state consisting only of the cytoplasm, and a metastable state which includes both a P granule and cytoplasm phase. This gradient mimics the properties of the Mex-5 gradient and is sufficient in explaining P granule localization. Using numerical simulations, the theoretical model is studied. It is found suffi- cient to both successfully describe P granule localizaion, and to describe interesting behavior in a system with assymetric growth due to a spatial gradient. From a purely theoretical standpoint, we observe cyclical non-equilibrium steady states, where material is cycled back and forth along the gradient. From the biological side, experimental properties of the system, such as the diffusion coefficient of P granules and P granule growth rates are determined through both simulation and image analysis of data. In addition, the possiblility of different types of growth behavior at later cell stages, and a method of long range intracellular signalling are suggested from the theoretical model.

During vertebrate development, gastrulation leads to the formation of three distinct germlayers. In zebrafish a central process is the delamination and the ingression of single cells from a common ancestor tissue - that will lead to the formation of the germlayers. Several molecules have been identified to regulate this process but the precise cellular mechanisms are poorly understood. Differential adhesiveness, a concept first introduced by Steinberg over 40 years ago, has been proposed to represent a key phenomena by which single hypoblast cells separate from the epiblast to form the mesendoderm at later stages. In this work it is shown that differential adhesion among the germlayer progenitor cells alone cannot predict germlayer formation. It is a combination of several mechanical properties such as cell cortex tension, cell adhesion and membrane mechanical properties that influence the migratory behavior of the constituent cells.

This thesis describes a highly interdisciplinary approach to discern the differing impact of scaffold dimensionality and physical space restrictions on the behavior of single cells. Rolled-up nanotechnology is employed to fabricate three-dimensional (3D) SiO/SiO2 microtube geometries of varied diameter, that after a biofunctionalization step are shown to support the growth of U2OS and six different types of stem cells. Cell confinement quantifiable through the given microtube diameter is tolerated by U2OS cells through a remarkable elongation of the cell body and nucleus down to a certain threshold, while the integrity of the DNA is maintained. This confinement for NSPCs also leads to the approaching of the in vivo morphology, underlining the space-restrictive property of live tissue. The dimensionality of the cell culture scaffold however is identified as the major determiner of NSPC migration characteristics and leads to a morphologically distinct mesenchymal to amoeboid migration mode transition. The 3D microtube migration is characterized by exclusively filopodia protrusion formation, a higher dependence on actin polymerization and adopts aspects of in vivo-reported saltatory movement. The reported findings contribute to the determination of biomaterial scaffold design principles and advance our current understanding of how physical properties of the extracellular environment affect cell migration characteristics.

RAGE (receptor for advanved glycation endproducts) was identified on endothelial cells as binding partner for AGE-modified molecules. The term "Advanced glycation endproducts" involves a number of structurally diverse molecules, which derive from multiple complex rearrangements of reducing sugars with free amino-groups of proteins. They evolve during food production and also in vivo during ageing and to an accelerated degree in diabetes, where AGEs cause receptor-mediated cellular perturbations. Due to the pathological relevance the aim of this thesis was to generate a "biosensor" for AGEs. To this end, the membrane-expressed receptor (flRAGE) as well as soluble RAGE (sRAGE) were expressed in mammalian cells and investigated in numerous binding studies. These did not reveal a specific interaction of AGE-modified ligands with RAGE. In addition, the expression of RAGE on endothelial cells, as described in the literature, could not be followed neither with the help of newly generated monoclonal anti-RAGE antibodies, nor in quantitative "real time" RT-PCR analysis. These results cast doubts on the meaning of RAGE as a proinflammatory receptor in AGE-mediated pathologies and on the adequacy of RAGE for the "biosensor". At the same time the question concerning a physiological role of the receptor arose. RAGE-expression was analysed in different healthy human tissues by "real time" RT-PCR, which revealed an almost selective expression in lung tissue. An important indication for a possible physiological function of RAGE in lung provided the selective localization of RAGE on alveolar epithelial type I cells as demonstrated in frozen lung sections as well as in in vitro cultivated lung cells. RAGE could be identified as a novel, highly specific marker for the thin, expanded AT I cell, which form part of the air-blood-barrier. In the following, RAGE was found to be an interaction partner for collagen IV, a major component of the alveolar basal lamina. Membrane-expressed RAGE did not only strengthened adherence of cells but also induced cell spreading on collagen IV-coated surfaces. This preferential interaction of RAGE with collagen IV could substantially contribute to the functional morphology of AT I cells in vivo, thereby ensuring an effective bidirectional gas-exchange. The results of this thesis expose a novel, so far unnoticed aspect of the biology of RAGE, which presumably contributes to the phenotypic characteristic und function of normal human lung tissue. / RAGE (receptor for advanced glycation endproducts) wurde als Interaktionspartner auf Endothelzellen für AGE-modifizierte Moleküle identifiziert. Unter den "Advanced glycation endproducts" werden eine Vielzahl strukturell unterschiedlicher Moleküle zusammengefasst, die durch mehrstufige komplexe Umlagerungen zwischen reduzierenden Zuckern und freien Aminogruppen von Proteinen entstehen. Sie entstehen sowohl bei der Herstellung von Lebensmitteln, als auch in vivo während des Alterns und in erhöhtem Maß bei Diabetes, wobei sie Rezeptor-vermittelt Zellstörungen hervorrufen. In der vorliegenden Arbeit wurde zunächst aufgrund der pathologischen Relevanz eine Strategie zur Konzeption eines "Biosensors" für AGEs verfolgt. Hierfür wurde sowohl der membranständige Rezeptor (flRAGE) als auch löslicher RAGE (sRAGE) in Säugerzellen exprimiert und in zahlreichen Bindungs- und Funktionsanalysen getestet. Hierbei konnte keine spezifische Interaktion der AGE-modifizierten Moleküle mit RAGE nachgewiesen werden. Auch die in der Literatur beschriebene Expression von RAGE auf Endothelzellen konnte mit Hilfe neu generierter monoklonaler Antikörper, sowie in quantitativen "real time" RT-PCR-Analysen nicht nachvollzogen werden. Diese Ergebnisse warfen Zweifel an der grundlegenden Bedeutung von RAGE als proinflammatorischer Rezeptor in AGE-bedingten Krankheiten auf und stellten damit auch dessen Eignung für einen AGE-Biosensor in Frage. Gleichzeitig warf diese Skepsis die Frage nach einer möglichen physiologischen Funktion dieses Rezeptors auf. Eine vergleichende Analyse der RAGE-Expression in verschiedenen gesunden Geweben mittels "real time" RT-PCR ergab eine nahezu selektive Expression in Lungengewebe. Wichtige Anhaltspunkte für die Funktion von RAGE in der Lunge ergaben sich aus der selektiven Lokalisation des Rezeptors auf Alveolarepithelzellen Typ I (AT I) sowohl in Gefrierschnitten der Lunge als auch nach in vitro-Kultur von Lungenzellen. RAGE konnte als neuer, hoch spezifischer Marker für die lang gestreckten AT 1 Zellen, die einen Teil der Blut-Luft-Schranke bilden, definiert werden. In folgenden Funktionsanalysen konnte RAGE als spezifischer Interaktionspartner für Kollagen IV, einer Hauptkomponente der Alveolar-Basalmembran, identifiziert werden. Membranständiger RAGE verstärkte nicht nur die Adhärenz von Zellen an Kollagen IV-beschichtete Oberflächen, er induzierte auch Zell-"Spreading". Dies gab Anlass für die Vermutung, dass die beobachtete präferentielle Interaktion von RAGE mit Kollagen IV maßgeblich zu der funktionellen Morphologie der AT I Zellen in vivo beitragen könnte, die die Voraussetzung für einen effektiven bidirektionalen Gasaustausch darstellt. Durch die Ergebnisse dieser Arbeit wurde ein neuer, bisher unbeachteter Aspekt der Biologie des RAGE aufgedeckt, der vermutlich entscheidend zur phänotypischen Ausprägung und Funktion des normalen humanen Lungengewebes beiträgt.