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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
11

Inner Ear Sensory Epithelia Development and Regulation in Zebrafish

Sweet, Elly Mae 2010 August 1900 (has links)
The inner ear is a complex sensory organ of interconnected chambers, each with a sensory epithelium comprised of hair cells and support cells for detection of sound and motion. This dissertation focuses on the development and regulation of sensory epithelia in zebrafish and utilizes loss of function, gain of function and laser ablation techniques. Hair cells and support cells develop from an equivalence group specified by proneural genes encoding bHLH transcription factors. The vertebrate Atoh1 bHLH transciption factor is a potential candidate for this role. However, data in mouse has led some researchers to conclude it does not have a proneural activity, but, rather, is involved in later stages of hair cell differentiation. In addition, the factors regulating Atoh1 are mostly unknown. We address these issues in zebrafish and show that the zebrafish homologs atoh1a and atoh1b are required during two developmental phases, first in the preotic placode and later in the otic vesicle. They interact with the Notch pathway and are necessary and sufficient for specification of sensory epithelia. Our data confirm atoh1 genes have proneural function. We also go on to show Atoh1 works in a complex network of factors, Pax2/5/8, Sox2, Fgf and Notch. Misexpression of atoh1 alters axial patterning and leads to expanded sensory epithelia, which is enhanced by misexpression of either fgf8 or sox2. Lastly, we examine the role of sox2 in sensory epithelia development and regeneration. Sox2 has been implicated in maintainence of pluripotent stem cells as well as cell differentiation. In the inner ear, Sox2 is initially expressed in the prosensory domain and is required for its formation. Eventually, Sox2 is downregulated in hair cells and maintained in support cells; however, its later role has not been determined. We show that in the zebrafish inner ear, sox2 is expressed after sensory epithelium development has begun and, like in mouse, expression is down regulated in hair cells and maintained in support cells. Our data demonstrate a role for sox2 in maintenance of hair cells and in transdifferentation of support cells into hair cells after laser ablation. Additionally, sox2 is regulated by Aoth1a/1b, Fgf, and Notch.
12

Neurosensory Development in the Zebrafish Inner Ear

Vemaraju, Shruti 2011 December 1900 (has links)
The vertebrate inner ear is a complex structure responsible for hearing and balance. The inner ear houses sensory epithelia composed of mechanosensory hair cells and non-sensory support cells. Hair cells synapse with neurons of the VIIIth cranial ganglion, the statoacoustic ganglion (SAG), and transmit sensory information to the hindbrain. This dissertation focuses on the development and regulation of both sensory and neuronal cell populations. The sensory epithelium is established by the basic helixloop- helix transcription factor Atoh1. Misexpression of atoh1a in zebrafish results in induction of ectopic sensory epithelia albeit in limited regions of the inner ear. We show that sensory competence of the inner ear can be enhanced by co-activation of fgf8/3 or sox2, genes that normally act in concert with atoh1a. The developing sensory epithelia express several factors that regulate differentiation and maintenance of hair cells. We show that pax5 is differentially expressed in the anterior utricular macula (sensory epithelium). Knockdown of pax5 function results in utricular hair cell death and subsequent loss of vestibular (balance) but not auditory (hearing) defects. SAG neurons are formed normally in these embryos but show disorganized dendrites in the utricle following loss of hair cells. Lastly, we examine the development of SAG. SAG precursors (neuroblasts) are formed in the floor of the ear by another basic helix-loophelix transcription factor neurogenin1 (neurog1). We show that Fgf emanating from the utricular macula specifies neuroblasts, that later delaminate from the otic floor and undergo a phase of proliferation. Neuroblasts then differentiate into bipolar neurons that extend processes to hair cells and targets in the hindbrain. We show evidence that differentiating neurons express fgf5 and regulate further development of the SAG. As more differentiated neurons accumulate, increasing level of Fgf terminates the phase of neuroblast specification. Later on, elevated Fgf stabilizes the transit-amplifying phase and inhibits terminal differentiation. Thus, Fgf signaling regulates SAG development at various stages to ensure that proper number of neurons is generated.
13

The Necessity of Geminin for Pluripotency and Neural Lineage

Aghazadeh Tabrizi, Golnaz 13 December 2012 (has links)
No description available.
14

Glioma as an Ecosystem : Studies of Invasion, Onco-miR Addiction and Mast Cell Infiltration

Põlajeva, Jelena January 2012 (has links)
Despite recent advances in oncology and extensive research efforts, gliomas remain essentially incurable. Glioblastoma multiforme (GBM, WHO grade IV) is the most common glioma and may arise de novo or progress from a lower-grade lesion. GBM is characterized by invasive growth, aberrant angiogenesis and necrosis. The heterogeneity of GBM is further complicated by the contribution of the inflammation that is facilitated by immune cells that reside in and infiltrate this immuno-privileged organ. One of the cells types present in the tumor microenvironment are mast cells (MC) that accumulate in the tumor in a grade-dependent manner. GBM cells secrete a plethora of cytokines acting as chemoattractants in MC recruitment and to a lesser degree induce MC proliferation in situ. Expression of one of the cytokines secreted by GBM cells - macrophage migration inhibitory factor (MIF) - correlates with MC accumulation in vivo. GBM cells invade the surrounding parenchyma making complete resection impossible. Here, migration was studied with the focus on RAP1 and its negative regulator RAP1GAP. Activation of RAP1 signaling by lentiviral silencing of RAP1GAP lead to decrease in cell migration and a shift in expression of SOX2 and GFAP, presumably enhancing stem cell phenotype. MicroRNAs are small non-coding RNAs known to regulate the mRNA network. miR-21 is highly overexpressed in the majority of cancers including GBM. Its expression is strictly regulated during embryonic development of the brain. SOX2 is co-regulated with miR-21 demarcating a cell population with neural/glial progenitor/stem cell properties. In an experimental mouse model, expression of miR-21 can be sustained by forced expression of PDGF-BB leading to gliomagenesis. GBM cells seem to be addicted to oncogenic properties of miR-21 as its knockdown leads to extensive apoptosis. This observation combined with the fact that miR-21 is absent in the normal adult mammalian brain suggest miR-21 to be an excellent therapeutic target. Effects of conventional therapy (surgery combined with radiochemotherapy) on prolonging patient survival have reached a plateau. New effective personalized therapeutic modalities need to be designed and implemented. Targeting the tumor microenvironment as well as cell intrinsic properties like invasive potential, stemness and onco-miR addiction studied in this thesis will hopefully lead to efficient disruption of GBM’s aberrant ecosystem.
15

Cloning and expression of pluripotent factors around the time of gastrulation in the porcine conceptus

Eborn, Douglas Robert January 1900 (has links)
Doctor of Philosophy / Department of Animal Sciences and Industry / David M. Grieger / Early in embryonic development a series of events occur whereby pluripotent cells undergo differentiation to give rise to the three germ layers and extraembryonic tissues of the developing conceptus. Nanog, Sox-2, and Oct-4 genes have been identified as having key roles in maintaining pluripotency in undifferentiated human and mouse cells but recent evidence suggests they may have different roles in farm animals. We cloned the coding sequence for porcine Nanog including 452 base pairs of the Nanog promoter, and partial coding sequences of Oct-4 and Sox-2. Embryos were flushed from sows 10, 12, 15, and 17 days post insemination. RNA was isolated from whole d-10 and -12 conceptuses, d-15 embryonic disk, distal and proximal extraembryonic tissue, and d-17 embryonic disk, distal and proximal extraembryonic tissue, and allantois for real-time PCR. RNA from d-40 maternal myometrium and endometrium, fetal placenta, and liver were also used in real-time PCR. The homeodomain and c-terminal tryptophan repeats are highly conserved in porcine Nanog compared to the mouse, human and bovine. In the promoter, the highly conserved Octamer and Sox binding sequences are also present. The Nanog expression pattern was different when compared to Oct-4 and Sox-2. Day-40 tissues demonstrated the highest expression including endometrium (7 fold) fetal liver (27 fold), placenta (40 fold) and myometrium (72 fold) when compared to day 15 distal extraembryonic tissue. Oct-4 and Sox-2 expression was lowest in d-40 tissues except for fetal liver which was 20 and 71 fold, respectively, higher than endometrium. Oct-4 levels were consistent in d-10, -12, and -15 conceptuses and disk but dropped 3 fold in d-17 disk. On the other hand, Sox-2 was upregulated a 1000 fold in the d-15 disk and 2000 fold in the d-17 disk when compared to the d-12 conceptus. Nanog may have other roles in than maintenance of pluripotency including a possible role in multipotent or progenitor stem cells. Expression of all 3 markers in fetal liver suggests a more primitive cell type is present such as hematopoietic stem cells.
16

Epithelial expressions of Gata4 and Sox2 regulate specification of the squamous-columnar junction via MAPK/ERK signaling in mice / Gata4とSox2の発現はMAPK/ERKシグナルを介してマウス扁平・円柱上皮境界部の運命決定を制御する

Sankoda, Nao 24 May 2021 (has links)
京都大学 / 新制・課程博士 / 博士(医学) / 甲第23374号 / 医博第4743号 / 新制||医||1051(附属図書館) / 京都大学大学院医学研究科医学専攻 / (主査)教授 藤田 恭之, 教授 椛島 健治, 教授 斎藤 通紀 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM
17

The Role of SOX2 in Colon Cancer Progression

Boral, Debasish 01 August 2014 (has links) (PDF)
SRY (sex determining region Y)-box 2 (SOX2) is one the embryonic stem cell transcription factors that is capable of reprogramming adult differentiated cells into an induced pluripotent cell. SOX2 is amplified in various types of epithelial cancers and its high its expression correlates with poor prognosis and decreased patient survival. Aberrant Wnt signaling drives the colo-rectal carcinogenic process and is a major determinant of the disease outcome. This study demonstrates that SOX2 counteracts Wnt driven tumor cell proliferation and maintains quiescence in a sub-population of Colo-Rectal Cancer (CRC) cells. High SOX2 expression is found in a sub-group of CRC patients with advanced disease. High SOX2 expression coupled with low Wnt activity was found in SW620 metastatic CRC cell line, while the opposite was true for the isogenic SW480 primary tumor cell line. SOX2 silencing increased Wnt activity and enhanced the oncogenic potential of SW620 cells in vitro and in vivo while over-expression had opposite effects in SW480 cells. SOX2 up-regulates the expression of PTPRK and PHLPP2 protein phosphatase genes which in turn attenuates Wnt activity by interfering with Protein Kinase A, B and C mediated beta catenin phosphorylation at Serine 552 and 675 amino acid residues thereby diminishing its nuclear sequestration and transcriptional activation. Thus SOX2 mitigates growth factor mediated Wnt activation in CRC cells and inhibits cellular proliferation so that these cells are forced to change their oncogene addiction. In effect, high SOX2 expression causes clonal evolution of APC mutant CRC cells from a state of high Wnt dependency to a state of low Wnt dependency in the process making such cells resistant to Wnt inhibitor therapy. Enhanced SOX2 transcriptional activity was associated with increased proportion of cancer cells in G0-G1 phase of cell cycle. Changing SOX2 protein levels in cells had a direct correlation with mRNA levels of RBL2-HUMAN and CDKN2B genes, which serve as regulators of G0 and G1 respectively. SOX2 was shown to physically bind and to the promoter region of these two genes and enhance their transcription. Thus high SOX2 expression, up-regulates the expression of key cell cycle inhibitor genes like RBL2 and CDKN2B and keeps cells in a dormant state. This phenomenon allows colon cancer cells to escape from cytotoxic drug therapy directed at rapidly dividing cells and cause treatment failure and disease relapse.
18

Efeito da reprogramação por indução à pluripotência (iPS) na manutenção do imprinting genômico celular / Effect of induced pluripotency reprogramming on genomic imprinting maintenance

Borges, Camila Martins 28 November 2016 (has links)
Biotecnologias reprodutivas como a produção in vitro de embriões e a transferência de núcleo apresentam grande potencial de aplicação na medicina veterinária seja para a correção de infertilidades, para o aumento na eficiência da produção animal ou mesmo para um melhor entendimento sobre os mecanismos envolvidos no desenvolvimento embrionário inicial. Porém, manipulações in vitro de gametas ou embriões levam a alterações na regulação epigenética, podendo causar altas taxas de anormalidades no desenvolvimento e no nascimento de indivíduos derivados. A geração de um modelo de indução da pluripotência in vitro, ou seja, a geração de células iPS (do inglês induced pluripotent stem cells) possibilitou estudar o processo de reprogramação in vitro de maneira robusta e precisa. Os genes OCT4 e SOX2 são fundamentais no processo de aquisição e manutenção da pluripotência celular, e recentemente foi reportado que a ação destes dois fatores exerce grande influência sobre a regulação de alguns genes imprinted, em especial, no locus H19/IGF2, sabidamente importantes para o desenvolvimento normal do embrião e de sua placenta. Este estudo propõe a geração de um modelo experimental in vitro onde os fatores em questão sejam estudados, juntos ou em combinação, quanto à sua influência na regulação do imprinting genômico. Para tal, três linhagens de fibroblastos fetais bovinos (bFF1, bFF2 e bFF3) foram transduzidas com vetores lentivirais contendo cDNAs de OCT4 ou SOX2 humanos. Os fibroblastos foram analisados através de citometria e as células positivas foram separadas e recuperadas (sorted). Os fibroblastos expressando OCT4, SOX2, ambos (OCT4 + SOX2), nenhum (controle) juntamente com um controle recuperado (não sorted) não transgênico (total de cinco tratamentos) foram investigados quanto à expressão de genes relacionados à pluripotência e expressão de genes imprinted, bem como a manutenção dos padrões de metilação do DNA no locus H19/IGF2. Além disso, estas células foram submetidas à reprogramação in vitro e produção de células iPS. A indução à pluripotência foi realizada através da transdução dos fibroblastos com o vetor policistrônico contendo o cDNAs murino ou humano dos fatores de transcrição OCT4, SOX2, c-MYC e KLF4 (OSMK, vetor STEMCCA). Os resultados da análise de fluorescência por citometria de fluxo foram, em média, de 40,4% para OCT4, 6,1% para SOX2 e 0,63% para OCT4 + SOX2. A bFF1 foi a única linhagem a apresentar uma recuperação pós-sorting, o que possibilitou sua utilização para a indução da pluripotência. De maneira interessante, as células que não passaram pela citometria geraram colónias de células iPS, enquanto que os demais grupos não. A quantificação de transcritos por qRT-PCR mostrou que a expressão de OCT4 e de SOX2 estava aumentada nos respectivos grupos, a expressão do gene H19 mostrou-se aumentada no grupo controle que passou pelo procedimento de sorting e a expressão do gene imprinted IGF2R não variou entre os grupos. Já a análise preliminar da manutenção do padrão de metilação de DNA na DMR do locus H19/IGF2 mostrou que o grupo controle sorted apresentou uma leve diferença no padrão de metilação quando comparada aos outros grupos. Neste estudo, portanto, o procedimento de separação e recuperação celular por citometria de fluxo celular, aliado ao elevado número de repiques celulares durante o cultivo prolongado pode ter levado a um efeito prejudicial sobre a eficiência de reprogramação in vitro / Reproductive biotechniques such as in vitro embryo production and somatic cell nuclear transfer may greatly contribute for fertility improvements, to enhance animal production or else to contribute to a better understanding of the underlying mechanism involved during initial embryonic development. However, in vitro manipulation of gametes or embryos may lead to possible disruptions on epigenetic regulation, causing high developmental abnormalities and decreased healthy calves born at term. The generation of induced pluripotency models (induced pluripotent stem cells, or iPS) made it possible to study the process of in vitro reprogramming in a more solid and precise manner. OCT4 and SOX2 are fundamental genes for the acquisition and maintenance process of cellular pluripotency. Recently, it has been reported that both factors may have a huge influence on the regulation of some imprinted genes, specially at locus H19/IGF2, known to be important for the normal development of embryo and placenta. Therefore, this study aimed to generate an in vitro experimental model where the above transcription factors will be studied together or separately regarding their influence on genomic imprinting regulation. For that, three bovine fetal fibroblasts cell lines (bFF1, bFF2 and bFF3) were transduced with lentiviral vectors containing human OCT4 or SOX2 cDNAs. The fibroblasts were analyzed trough cell cytometry and positive cells were sorted. Fibroblasts expressing OCT4, SOX2, both (OCT4+SOX2), none (control) together with a non-sorted and non-transgenic control (five treatments) were investigated regarding pluripotency and imprinted gene expression, as well maintenance of DNA methylation patterns at H19/IGF2 locus. Further, these cells were also submitted to in vitro induced reprogramming and production of iPS cell colonies. Induction into pluripotency was realized by transducing fibroblasts with polycistronic excisable vector containing the murine or human cDNA of OCT4, SOX2, c-MYC and KLF4 transcription factors (OSMK, STEMCCA vector). The results of fluorescence analysis by flow cytometry were, on average, 40.4% for OCT4, 6.1% for SOX2 and 0,63% for OCT4+SOX2 groups. bFF1 was the only lineage presenting a post-sorting recovery that enabled its use for pluripotency induction. Interestingly, non-sorted cells generated biPS colonies whereas sorted cells (control non transgenic, OCT4, SOX2 and OCT4+SOX2 expressing cells) did not generate biPS cells. The transcript quantification by qRT-PCR showed that OCT4 and SOX2 expression were increased in the respective groups, the expression of H19 gene was increased in the control sorted group and IGF2R expression was not different between groups. Preliminary results of imprinting pattern methylation at H19/IGF2 locus showed that sorted group was slightly different from others. In this study, therefore, analysis and sorting procedure by flow citometry, together with an extended period in culture may have lead to a detrimental effect on in vitro reprogramming efficiency
19

Reprogrammation embryonnaire et somatique au moment de la mise en route du génome dans l’embryon bovin / Embryonic and somatic reprogramming at the time of embryonic genome activation in the bovine embryo

Khan, Daulat Raheem 19 October 2011 (has links)
Lors de la fécondation, le sperme et l'ovule s'unissent pour former un zygote totipotent. Initialement, le zygote est transcriptionnellement inactif. Au cours des premiers clivages a lieu la mise en route du génome embryonnaire (EGA) et le développement passe alors sous le contrôle de l’information embryonnaire (au stade 8-16-cellules chez le bovin). Cette transition d’un contrôle maternel à un contrôle embryonnaire est appelée « maternal to embryonic transition (MET) ». De la même façon, lors du transfert nucléaire (clonage), un noyau de cellule somatique placé dans un ovocyte énucléé devient totipotent. Ce processus est appelé «reprogrammation nucléaire somatique?». En fait, la reprogrammation nucléaire lors du clonage est équivalente à la MET, toutefois, le clonage est très peu efficace. Les objectifs de cette étude chez les bovins sont a) d'explorer le processus de reprogrammation lors de la MET dans des embryons fécondés in vitro (FIV) et b) d’estimer l'efficacité de la reprogrammation génique après le transfert nucléaire lors du clonage. Nous émettons l'hypothèse que l'acquisition d'un profil d'expression génique correct pourrait être prédictif d’un potentiel de développement à terme de l'embryon, et pourrait être évalué dès juste après l'activation du génome embryonnaire (EGA) chez les bovins. Nous avons développé notre travail selon deux axes a) des analyses globales d'expression génique utilisant une puce dédiée à l’EGA et b) l’analyse du profil d'expression de gènes candidats par qRT-PCR dans les embryons fécondés et clonés. Dans un premier temps nous avons optimisé le protocole d'amplification d'ARNm pour l'analyse du transcriptome de matériels rares. Puis nous avons fait l'analyse du transcriptome avant et après EGA d’embryons issus d’ovocytes prélevés sur des vaches phénotypées comme « bonnes » ou « mauvaises » donneuses d’embryons. En outre, ces ovocytes ont été maturés soit in vivo soit in vitro. Nos analyses montrent que l'effet individuel est plus important que l'effet « bonne ou mauvaise donneuse » ou même que l’effet « conditions de maturation ». Nous avons ensuite analysé les expressions géniques de 5 types d'embryons clonés ayant différents potentiels de développement à terme en fonction de la lignée cellulaire utilisée comme source de cellules donneuses. Globalement, leur expression génique est proche de celle de morulae FIV, mais quelques gènes présentent une expression différente. Ces gènes varient avec la lignée de cellules donneuses et leur nombre n’est pas lié à l’aptitude au développement à terme. L’analyse d’un lien éventuel entre leur nature et cette aptitude devra être poursuivie. Dans un deuxième temps, nous avons analysé les profils d'expression spatio-temporelle des transcrits et des protéines des gènes de pluripotence (OCT4, SOX2 et NANOG) et les niveaux d'ARNm de certains de leurs cibles dans les ovocytes et les embryons précoces chez le bovin. Les profils d'expression de ces gènes ont aussi été analysés dans des embryons clonés présentant différents potentiels de développement à terme. Nos résultats montrent que (1) la triade de gènes de pluripotence n'est probablement pas impliquée dans l’EGA bovine. (2) les transcrits et protéines de SOX2 et de NANOG sont restreints au lignage pluripotent plus tôt que ceux de OCT4, (3) les embryons à faible taux de développement à terme ont un taux de transcription plus élevé, néanmoins, l’équilibre précaire entre les gènes de pluripotence est maintenue. Cet équilibre pourrait permettre un développement normal in vitro, mais le taux de transcription plus élevé pourrait avoir des conséquences délétères sur le développement ultérieur. / In natural fertilization, sperm and ovum unite to form a totipotent zygote. Initially, the zygote is transcriptionally inactive and after few cleavages (8-16-cell stage in bovine) embryonic genome activation (EGA) takes place and embryo shifts from maternal to embryonic control, the process called maternal to embryonic transition (MET). Likewise, in nuclear transplantation (cloning) a somatic cell nucleus achieves totipotency when placed in an enucleated oocyte, the process called “nuclear reprogramming”. In fact, nuclear reprogramming in cloning experiments is equivalent to MET; however, this process is afflicted with low efficiency. The objectives of this study in bovine were a) to explore the process of MET reprogramming of in vitro fertilized (IVF) embryos and b) to estimate the efficiency of gene reprogramming after nuclear transfer in animal cloning. We hypothesized that the acquisition of a proper gene expression pattern could herald development potential of the embryos, which could be assessed as early as morula stage or after embryonic genome activation (EGA) in bovine. Here, we opted for a study plan consisting of two axes a) global gene expression analysis using an EGA-dedicated microarray and b) candidate gene expression profiling through qRT-PCR in the fertilized and cloned bovine embryos. Firstly, we optimized the protocol of mRNA amplification for transcriptome analysis which generates antisens-RNA (aRNA). Then we did transcriptomic analysis of the 4-cell and morulae derived from two genotypes having better and two genotypes having poorer in vitro embryonic development potentials. In addition, these oocytes were either matured in vivo or in vitro. We observed that the effect of individual genotype was more important than the effect of the phenotypic category (poorer or better) or conditions of oocyte maturation. Furthermore, we explored the expression patterns of 5 types of cloned embryos having different full term developmental potentials depending upon the donor cell line used. Their genes expression patterns closely resembled to the IVF morulae, except for few genes which present differences. These genes vary with the cell line used as somatic cell donor for SCNT and the number of these deregulated genes did not increase with the poorer developmental potential of the cloned embryos. The analysis of an eventual correlation between the potential for embryonic development to term and nature of the deregulated genes should be addressed. Secondly, we charted quantitative and/or qualitative spatio-temporal expression patterns of transcripts and proteins of pluripotency genes (OCT4, SOX2 and NANOG) and mRNA levels of some of their downstream targets in bovine oocytes and early embryos. Furthermore, to correlate expression patterns of these genes with term developmental potential, we used cloned embryos, instead of gene ablation, having similar in vitro but different full term development rates. We chose these genes to be analysed since pluripotency genes are implicated in mouse embryonic genome activation (EGA) and pluripotent lineage specification. Moreover, their expression levels have been correlated with embryonic term development. Our findings affirm: first, the core triad of pluripotency genes probably is not implicated in bovine EGA since their proteins were not detected during pre-EGA phase, despite the transcripts for OCT4 and SOX2 were present. Second, an earlier ICM specification of SOX2 and NANOG makes them better candidates of bovine pluripotent lineage specification than OCT4. Third, embryos with low term development potential have higher transcription rates; nevertheless, precarious balance between pluripotency genes is maintained. This balance presages normal in vitro development but, probably higher transcription rate disturbs it at later stage that abrogates term development.
20

Efeito da reprogramação por indução à pluripotência (iPS) na manutenção do imprinting genômico celular / Effect of induced pluripotency reprogramming on genomic imprinting maintenance

Camila Martins Borges 28 November 2016 (has links)
Biotecnologias reprodutivas como a produção in vitro de embriões e a transferência de núcleo apresentam grande potencial de aplicação na medicina veterinária seja para a correção de infertilidades, para o aumento na eficiência da produção animal ou mesmo para um melhor entendimento sobre os mecanismos envolvidos no desenvolvimento embrionário inicial. Porém, manipulações in vitro de gametas ou embriões levam a alterações na regulação epigenética, podendo causar altas taxas de anormalidades no desenvolvimento e no nascimento de indivíduos derivados. A geração de um modelo de indução da pluripotência in vitro, ou seja, a geração de células iPS (do inglês induced pluripotent stem cells) possibilitou estudar o processo de reprogramação in vitro de maneira robusta e precisa. Os genes OCT4 e SOX2 são fundamentais no processo de aquisição e manutenção da pluripotência celular, e recentemente foi reportado que a ação destes dois fatores exerce grande influência sobre a regulação de alguns genes imprinted, em especial, no locus H19/IGF2, sabidamente importantes para o desenvolvimento normal do embrião e de sua placenta. Este estudo propõe a geração de um modelo experimental in vitro onde os fatores em questão sejam estudados, juntos ou em combinação, quanto à sua influência na regulação do imprinting genômico. Para tal, três linhagens de fibroblastos fetais bovinos (bFF1, bFF2 e bFF3) foram transduzidas com vetores lentivirais contendo cDNAs de OCT4 ou SOX2 humanos. Os fibroblastos foram analisados através de citometria e as células positivas foram separadas e recuperadas (sorted). Os fibroblastos expressando OCT4, SOX2, ambos (OCT4 + SOX2), nenhum (controle) juntamente com um controle recuperado (não sorted) não transgênico (total de cinco tratamentos) foram investigados quanto à expressão de genes relacionados à pluripotência e expressão de genes imprinted, bem como a manutenção dos padrões de metilação do DNA no locus H19/IGF2. Além disso, estas células foram submetidas à reprogramação in vitro e produção de células iPS. A indução à pluripotência foi realizada através da transdução dos fibroblastos com o vetor policistrônico contendo o cDNAs murino ou humano dos fatores de transcrição OCT4, SOX2, c-MYC e KLF4 (OSMK, vetor STEMCCA). Os resultados da análise de fluorescência por citometria de fluxo foram, em média, de 40,4% para OCT4, 6,1% para SOX2 e 0,63% para OCT4 + SOX2. A bFF1 foi a única linhagem a apresentar uma recuperação pós-sorting, o que possibilitou sua utilização para a indução da pluripotência. De maneira interessante, as células que não passaram pela citometria geraram colónias de células iPS, enquanto que os demais grupos não. A quantificação de transcritos por qRT-PCR mostrou que a expressão de OCT4 e de SOX2 estava aumentada nos respectivos grupos, a expressão do gene H19 mostrou-se aumentada no grupo controle que passou pelo procedimento de sorting e a expressão do gene imprinted IGF2R não variou entre os grupos. Já a análise preliminar da manutenção do padrão de metilação de DNA na DMR do locus H19/IGF2 mostrou que o grupo controle sorted apresentou uma leve diferença no padrão de metilação quando comparada aos outros grupos. Neste estudo, portanto, o procedimento de separação e recuperação celular por citometria de fluxo celular, aliado ao elevado número de repiques celulares durante o cultivo prolongado pode ter levado a um efeito prejudicial sobre a eficiência de reprogramação in vitro / Reproductive biotechniques such as in vitro embryo production and somatic cell nuclear transfer may greatly contribute for fertility improvements, to enhance animal production or else to contribute to a better understanding of the underlying mechanism involved during initial embryonic development. However, in vitro manipulation of gametes or embryos may lead to possible disruptions on epigenetic regulation, causing high developmental abnormalities and decreased healthy calves born at term. The generation of induced pluripotency models (induced pluripotent stem cells, or iPS) made it possible to study the process of in vitro reprogramming in a more solid and precise manner. OCT4 and SOX2 are fundamental genes for the acquisition and maintenance process of cellular pluripotency. Recently, it has been reported that both factors may have a huge influence on the regulation of some imprinted genes, specially at locus H19/IGF2, known to be important for the normal development of embryo and placenta. Therefore, this study aimed to generate an in vitro experimental model where the above transcription factors will be studied together or separately regarding their influence on genomic imprinting regulation. For that, three bovine fetal fibroblasts cell lines (bFF1, bFF2 and bFF3) were transduced with lentiviral vectors containing human OCT4 or SOX2 cDNAs. The fibroblasts were analyzed trough cell cytometry and positive cells were sorted. Fibroblasts expressing OCT4, SOX2, both (OCT4+SOX2), none (control) together with a non-sorted and non-transgenic control (five treatments) were investigated regarding pluripotency and imprinted gene expression, as well maintenance of DNA methylation patterns at H19/IGF2 locus. Further, these cells were also submitted to in vitro induced reprogramming and production of iPS cell colonies. Induction into pluripotency was realized by transducing fibroblasts with polycistronic excisable vector containing the murine or human cDNA of OCT4, SOX2, c-MYC and KLF4 transcription factors (OSMK, STEMCCA vector). The results of fluorescence analysis by flow cytometry were, on average, 40.4% for OCT4, 6.1% for SOX2 and 0,63% for OCT4+SOX2 groups. bFF1 was the only lineage presenting a post-sorting recovery that enabled its use for pluripotency induction. Interestingly, non-sorted cells generated biPS colonies whereas sorted cells (control non transgenic, OCT4, SOX2 and OCT4+SOX2 expressing cells) did not generate biPS cells. The transcript quantification by qRT-PCR showed that OCT4 and SOX2 expression were increased in the respective groups, the expression of H19 gene was increased in the control sorted group and IGF2R expression was not different between groups. Preliminary results of imprinting pattern methylation at H19/IGF2 locus showed that sorted group was slightly different from others. In this study, therefore, analysis and sorting procedure by flow citometry, together with an extended period in culture may have lead to a detrimental effect on in vitro reprogramming efficiency

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