Thesis (M. Sc. (Geography)) -- University of Limpopo, 2021 / Acid Mine Drainage (AMD) is the acidic water emanating from the mine tailing dams into the surrounding environment. AMD is regarded as a major environmental threat associated with mining. The lower Olifants River in the Kruger National Park (KNP) is considered an environmentally sensitive area, which exhibits high levels of aquatic ecosystems and supports a variety of terrestrial ecosystems within and around the KNP. The Phalaborwa mining industries have been discharging the acid mine drainage contaminated-water into the Ga-Selati River, a tributary to the Olifants River. Although the impacts in the upper Olifants River catchment have been well documented, it was the amount of AMD witnessed at KNP and the dying of fish within the lower Olifants River that raised issues of concerns. Hence, the study investigated the impact of acid mine drainage on water quality of the lower Olifants River, modelled the distribution of the dissolved heavy metals in the stream, and evaluated the applied mine wastewater management strategies at Phalaborwa mining industries. In this study, water samples were collected seasonally (winter, spring, and summer) from 2019 to 2020, and the analytical methods and procedures were optimized for the determination of selected elements in the water samples. During the study, ion chromatography (IC) was used to detect chloride (Cl), sulphate (SO4 - ), nitrate (NO3), and fluoride (F), Inductively Coupled Plasma Optical Emission Spectroscopy (ICP-OES) was used to detect pH, turbidity, electrical conductivity (EC), total dissolved solids (TDS), magnesium (Mg), manganese (Mn), sodium (Na), potassium (K), aluminium (Al) and calcium (Ca). Modelling of the distribution of dissolved heavy metals was performed using the inverse distance weighted (IDW) interpolation technique available in ArcGIS 10.8 software. The range of pH across four sampling sites was between 7.77 and 9.11, indicating an alkaline pH. The concentration of measured parameters elevated downstream points with some exceeding the target water quality range (TWQR) for aquatic ecosystems. The elevated concentration of SO4 - at sites 3 and 4 (downstream points) showed that the acid mine drainage is still a matter of concern at the lower Olifants River catchment. However, the GIS models showed a decreasing trend of the concentration of heavy metal towards the KNP.

PhD. (Department of Biotechnology, Faculty of Applied and Computer Sciences), Vaal University of Technology. / South Africa utilises more antiretroviral (ARV) compounds per capita than any other nation in the fight against Human Immune Deficiency Virus (HIV) or acquired immunodeficiency syndrome (AIDS). Considering the main entrance pathways of antiviral drugs into the urban water cycle, excretions via urine or faeces from treated individuals play a dominant role. Due to the limited efficiency of conventional biological treatment (activated sludge), ARVs were detected in South African wastewater treatment plant effluents and surface waters. This poses a threat to aquatic environments due to the toxicity of ARVs and can be a potential contributor to ARV resistance due to persistent low level ARV exposure in the general population. This study investigated the efficacy of a moving bed biofilm reactor (MBBR) for ctybtri8nthe elimination of five ARV compounds i.e., tenofovir, emtricitabine, nevirapine, ritonavir and efavirenz from synthetic wastewater. Furthermore, the study also looked at the shift in microbial community compositions of biofilms in the MBBR due to exposure to the ARV compounds. Lastly, the ecotoxicity of the MBBR’s influent and effluent along with the actual ARV compounds were examined. The capacity of ARV degradation by the MBBR was investigated by spiking synthetic wastewater influent with 10 μg/L of five ARV compounds. Actual removal during treatment was assessed by sampling the inlets and outlets of the reactor. A targeted solid phase extraction method with Ultra High Pressure Liquid Chromatography coupled to quadrupole time of flight mass spectrometry (LC-MS/MS) was used to quantify the five ARV compounds. Microbial diversity (alpha-diversity) of seeded sludge from a full-scale municipal WWTP and biofilm samples from a laboratory scale MBBR system during pre- and post-introduction of ARV compounds was investigated by Illumina sequencing of the 16S rRNA gene. Ecological toxicity of the MBBR’s influent and effluent along with the five ARV compounds was determined using the Vibrio fischeri, Daphnia magna and Selenastrum capricornutum toxicity test kits and measured as EC50. After MBBR treatment; Nevirapine, Tenofovir, Efavirenz, Ritonavir and Emtricitabine all showed marked reduction in concentration between the influent and effluent of the MBBR. On average, the percentage removed for Nevirapine, Tenofovir, Efavirenz, Ritonavir and Emtricitabine was 62.31%, 74.18%, 93.62%, 94.18% and 94.87% respectively. Microbial diversity results demonstrated that the introduction of antiretroviral drugs affects the bacterial community composition and diversity considerably. For instance, Nitrosomonas, Nitrospira and Alicycliphilus were found to be higher in post introduction of ARV compounds biofilm samples than in biofilm samples before the introduction of ARV compounds. The EC50 for Tenofovir, Emtricitabine, Nevirapine, Ritonavir and Efavirenz were 82.5, 41.7, 39.3, 60.3 and 0.21 mg/L respectively for S. capricornutum; 81.3, 50.7, 49, 87.1 and 0.43 mg/L respectively for D. magna; and 73.5, 55.1, 41.3, 83.6 and 0.55 mg/L respectively for V. fischeri. The EC50 of the influent and effluent were found to be above 100% concentration, therefore they could not be specifically determined. The ecotoxicity results show that ARV compounds are potentially toxic to the environment, with efavirenz being more toxic than the other four ARV compounds tested. Since there were no toxic effects observed from the effluent, it can be assumed that mineralisation has occurred, or the transformation products are of less or equal toxicity to the influent (because the influent did not show any toxic effects to the model organisms tested).

Water Quality Management is one of the critical challenges currently facing South Africa. The triad of water resource management, socio- economic development and environmental sustainability are key issues that require balance and compromise. The effects of anthropogenic activities on the Blesbokspruit catchment were examined. Water samples were collected from nine strategically selected sites along the stream for a period of ten months in six weekly intervals and analysed for physio-chemical, selected trace metals and microbial entities. Results revealed that variables of concern were Electrical Conductivity (EC), Total Suspended Solids (TSS), Nitrates, Phosphates, Sulphates and Chemical Oxygen Demand (COD). Mean levels of these parameters in this order ranged from 93.0-146.63mS/m; 11.25-39mg/L; 0.16-2.01mg/L; 0.5-0.96mg/L; 118.63-379.5mg/L and 15.0-34.0mg/L respectively. Levels of E. coli and F. coliforms also ranged from 19.13- 43999.125 cfu/100mL and 20.63-16878.5 cfu/100mL respectively which were of concern. Levels of analysed trace metals were tolerable except for Fe with a range of 0.04- 0.73mg/L. Generally, the results from this study indicate that the river is contaminated and therefore not suitable for direct human consumption as well as for irrigation purposes.

Inadequately treated wastewater effluent is harmful to the receiving aquatic environment. Water-borne chemicals and microbial pathogens pose a health risk to anyone living downstream from sewage treatment facilities. This study assessed the effluent from a package plant with a design capacity of 48kℓ/24 hours, servicing 12 household units and a restaurant in Mogale City. Over a 12 month period, fortnightly water samples were collected from ten selected sites including two boreholes, a river and two dams. Standard parameters including physical (pH, EC, temperature, DO and SS), chemical (nutrient concentration) and biological (bacterial counts) were analysed using handheld meters, standard membrane filter techniques and colorimetric methods. One borehole was affected by pathogen and nitrate runoff from an adjacent poultry farm. If regularly monitored, the package plant effectively removed microbes (most samples contained 0 cfu/100mℓ) but above limit COD, ammonia and phosphate was released in the effluent (with maximum values of 322 mg/ℓ, 42.52 mg/ℓ and 7.18 mg/ℓ, respectively). Generally, river and dam water at the site was of good quality. / Environmental Science / M. Sc. (Environmental Science)

Thesis (MScAgric (Conservation Ecology and Entomology)--University of Stellenbosch, 2005. / A semi-arid country, like South Africa, with unpredictable seasonal rainfall, is subject to great scarcity in water and an ever-increasing demand from the rising human population. Therefore, efficient reservoirs as well as monitoring methods are needed to manage the South African water supply. This study was undertaken on the Eerste River in the Western Cape, South Africa, focusing on the impact of the Klein Plaas dam system on the benthic macroinvertebrates. The study also examined the use of benthic macroinvertebrates as bioindicators of water quality with special reference to the South African Scoring System Version 5(SASS5) that is currently being used nationally. The impoundment of the water, as well as the inter-basin transfer programme and the experimental cage-culture trout farm, all play a significant role in the disturbance impact of the dam on the Eerste River system. The disturbance is manifested as a drop in water quality that can be seen in the distribution of keystone species, changes in the riparian vegetation, as well as in physical-, chemical-, and biomonitoring evaluations. The study also indicated that the SASS5 is effective, but needs some adjustments, such as inclusion of a prediction phase, finer spatial-scale methodologies and greater consideration of the rarity of species.

Water Quality Management is one of the critical challenges currently facing South Africa. The triad of water resource management, socio- economic development and environmental sustainability are key issues that require balance and compromise. The effects of anthropogenic activities on the Blesbokspruit catchment were examined. Water samples were collected from nine strategically selected sites along the stream for a period of ten months in six weekly intervals and analysed for physio-chemical, selected trace metals and microbial entities. Results revealed that variables of concern were Electrical Conductivity (EC), Total Suspended Solids (TSS), Nitrates, Phosphates, Sulphates and Chemical Oxygen Demand (COD). Mean levels of these parameters in this order ranged from 93.0-146.63mS/m; 11.25-39mg/L; 0.16-2.01mg/L; 0.5-0.96mg/L; 118.63-379.5mg/L and 15.0-34.0mg/L respectively. Levels of E. coli and F. coliforms also ranged from 19.13- 43999.125 cfu/100mL and 20.63-16878.5 cfu/100mL respectively which were of concern. Levels of analysed trace metals were tolerable except for Fe with a range of 0.04- 0.73mg/L. Generally, the results from this study indicate that the river is contaminated and therefore not suitable for direct human consumption as well as for irrigation purposes.

Environmental education is an approach to education which emphasises the interrelatedness of people and their human and non-human environments and seeks to encourage environmental awareness, concern and action. This case study documents the implementation and development of Project WATER, Grahamstown, a practical environmental education project dealing with catchment conservation and water quality monitoring. The Grahamstown project is one of a number of local water quality monitoring initiatives affiliated to GREEN (the Global Rivers Environmental Education Network). Participants in the project included student teachers from the Department of Education at Rhodes University and pupils and teachers from three farm schools in the district and four high schools in the town. Project WATER, Grahamstown developed as an Action Research and Community Problem-Solving project. The study focuses on fragmentalist and holistic approaches to education, people's responses to Project WATER and the choice of action research as the research method.

Although the use of pesticides is necessary to meet the socio-economic needs of many developing countries, especially in Africa, side effects of these bio-active chemicals have contributed to contaminating aquatic and terrestrial ecosystems. Environmental water quality degradation by pesticides interferes with ecosystem health and poses numerous risks to aquatic life. In South Africa, glyphosate-based herbicides are frequently used to control weeds and invading alien plants, but ultimately end up in freshwater ecosystems. However, there are no South African-based environmental water quality management strategies to regulate these bio-active chemicals. Therefore, this study sought to provide a sound scientific background for the environmental water quality management of glyphosate-based herbicides in South Africa, by conducting both laboratory and field investigations. In the laboratory investigations, aquatic ecotoxicological methods were used to evaluate responses of the freshwater aquatic shrimp Caridina nilotica exposed to Roundup® at different biological system scales, and the responses of multiple South African aquatic species exposed to Roundup® through species sensitivity distribution (SSD). In the field investigations, the effect of Kilo Max WSG on the physicochemical and biological conditions of three selected sites in the Swartkops River before and after a spray episode by Working for Water were evaluated through biomonitoring, using the South African Scoring System version 5 (SASS5) as a sampling protocol. Both Roundup® and Kilo Max WSG are glyphosate-based herbicides. All the data were subjected to relevant statistical analyses. Findings of this study revealed that Roundup® elicited responses at different biological system scales in C. nilotica, while SSD estimates were used to derive proposed water quality guidelines for glyphosate-based herbicides in South Africa. The biomonitoring revealed that using glyphosate-based herbicides to control water hyacinth within the Swartkops River had a negligible impact on the physicochemical and biological conditions. Based on these findings, a conceptual framework that can be used for the integrated environmental water quality management of glyphosate-based herbicides in South Africa was developed as part of integrated water resource management (IWRM). The combined data sets contribute to a sound scientific basis for the environmental water quality management of glyphosate-based herbicides in South Africa.

Inadequately treated wastewater effluent is harmful to the receiving aquatic environment. Water-borne chemicals and microbial pathogens pose a health risk to anyone living downstream from sewage treatment facilities. This study assessed the effluent from a package plant with a design capacity of 48kℓ/24 hours, servicing 12 household units and a restaurant in Mogale City. Over a 12 month period, fortnightly water samples were collected from ten selected sites including two boreholes, a river and two dams. Standard parameters including physical (pH, EC, temperature, DO and SS), chemical (nutrient concentration) and biological (bacterial counts) were analysed using handheld meters, standard membrane filter techniques and colorimetric methods. One borehole was affected by pathogen and nitrate runoff from an adjacent poultry farm. If regularly monitored, the package plant effectively removed microbes (most samples contained 0 cfu/100mℓ) but above limit COD, ammonia and phosphate was released in the effluent (with maximum values of 322 mg/ℓ, 42.52 mg/ℓ and 7.18 mg/ℓ, respectively). Generally, river and dam water at the site was of good quality. / Environmental Science / M. Sc. (Environmental Science)

The spatio-temporal patterns in concentrations of selected metals within the sediment (Cd, Co, Cu, Fe, Pb, Ni and Zn) and water (Cd and Pb) of three permanently open estuaries (Kariega, Kowie, Great Fish) and six temporary open-closed estuaries (Mpekweni, East Kleinemonde, West Kleinemonde, Riet, Kasouga, Boknes) were investigated. The concentrations of metals were influenced by size composition and total organic content of the sediments. Enrichment factors (EFs), using Fe as a reference element, and baseline linear regression models for metals vs. Fe were calculated to assess the extent of metal enrichment in the sediments. The mean concentrations of metals in the sediments(mg·kg⁻¹) showed ranges of 0.28 – 2.31 for Cd, 1.26 – 6.24 Co, 0.69 – 6.93 for Cu, 2119 – 14912 for Fe, 2.29 –14.01 for Ni, 4.81 – 22.20 for Pb and 5.77 – 21.75 for Zn. Mean normalized enrichment factors ranged between 0.75 – 6.19 for Cd, 0.53 – 2.71 for Co, 0.22 – 0.84 for Cu, 0.30 – 1.87 for Ni, 0.99 – 3.17 for Pb and 0.14 – 0.98 for Zn. All nine estuaries had average enrichment factors of greater than 1 for Cd. In general there was no enrichment of Cu and Zn in the sediments of any of the estuaries included in this study (EFs < 1). The Kariega, East Kleinemonde, West Kleinemonde, Riet and Great Fish Estuaries showed some degree of enrichment for Co (1 < EF < 4), Ni (1 < EF < 2) and Pb (1 < EF < 4), while the Mpekweni, Kasouga, Boknes and Kowie Estuaries were unenriched with these metals (EF < 1). Enrichment factors for Cd, Co and Pb typically followed the development gradient along the estuaries, suggesting anthropogenic enrichment. The concentrations of Cd and Pb in the water of the nine estuaries were also determined. The average concentrations of Cd and Pb in the water (μg·ℓ⁻¹) ranged between 0.05 – 3.32 and 0.75 – 34.13 respectively. On average the concentrations of Cd and Pb in the water of all the estuaries were below the South African recommended water quality guidelines for coastal marine waters. Variations in metal concentrations associated with changes in hydrology (wet vs. dry season) were determined in the water and sediment of the Kariega, East Kleinemonde and Riet Estuaries. Cobalt, Pb and Ni enrichment in the Kariega Estuary sediment was significantly higher during the dry season, and the mean concentrations of Pb and Cd in the water column were 19-fold and 66-fold higher in the dry season. The elevated concentration of metals during the dry season could be related to accumulation of diffuse pollution from human activities within the catchment area. Conversely, inflow of fresh water into the estuary had the net effect of reducing the concentration and enrichment of these metals within the Kariega Estuary due to scouring and outflow of estuarine water and sediment into the marine environment. The temporal variations in metal concentrations and enrichment factors were less pronounced in the temporary open-closed estuaries than the permanently open Kariega Estuary. The observed trend can probably be related to the low anthropogenic impact within the catchment areas of these systems, and the relatively smaller size of the catchments. Significant spatial variations existed in metal enrichment in the sediment of both the East Kleinemonde and Riet estuaries, with the highest degrees of enrichment occurring in the sediments from the marine environment and lower reaches.