TGFβ signalling via Smad transcription factors is essential for axis patterning and subsequent cell fate specification during mammalian embryogenesis. However, the cellular and molecular mechanisms have been difficult to characterise in vivo due to early embryonic lethality of mouse mutants and redundant functional activities. Here I show that combined deletion of closely related Smad2 and Smad3 in mouse embryonic stem cells impairs induction of lineage specific gene expression during differentiation, while extra-embryonic gene expression is up-regulated. Preliminary data suggest that the underlying mechanism of this differentiation defect reflects the inability of Smad2/3^-/- cells to establish lineage priming. Collectively, these findings identify novel downstream target genes controlled by Smad2/3 and an absolute requirement for Smad2/3 during embryonic differentiation. TGFβ signalling via Smad1 and Smad4 is essential for induction of the transcription factor Blimp1 required for primordial germ cell specification. The direct upstream regulators of Blimp1 are unknown, but T-box factors have recently been suggested to play a role. In a second project, I performed tissue- specific ablation of the T-box transcription factor Eomes as well as components of the TGFβ signalling pathway in either the visceral endoderm or the epiblast to examine tissue-specific functions for Blimp1 induction. I show that Eomes and Smad2 functions in the visceral endoderm as well as Eomes function in the epiblast are dispensable for Blimp1 induction, but rather are required to restrict Blimp1 induction to posterior epiblast cells. In contrast, epiblast-specific Smad4 or Smad1 mutants fail to robustly induce Blimp1 in the epiblast. My preliminary analysis suggests that competence to induce primordial germ cell fate is dependent on the interplay of Smad2/Eomes functions in the visceral endoderm and Smad1/4 functions in the epiblast. Collectively, this thesis provides insight into the transition from pluripotency to cell fate specification in the mammalian embryo that is impossible to obtain from human embryos in vivo.

Les eIF2B-pathies représentent un groupe de leucodystrophies de transmission autosomique récessive du à des mutations du facteur ubiquitaire eIF2B. Celui-ci intervient dans l’initiation de la traduction et ses régulations, particulièrement en cas de stress cellulaires, grâce à son activité d’échange de guanine (GEF). Un large spectre clinique et mutationnel a été décrit pour cette pathologie.La diminution de l’activité GEF a pu être validée comme marqueur diagnostique spécifique des eIF2B-pathies dans les lymphoblastes de patients atteints avec un seuil d’activité à 77,5% pour une spécificité de 100% et une sensibilité de 89%.La compréhension des mécanismes moléculaires en cause a ensuite été recherchée selon trois approches :- une première focalisée sur l’étude de la réponse au stress du réticulum endoplasmique (RE) dans les lymphoblastes de patients eIF2B-mutés. L’hyper-activation transcriptionnelle et traductionnelle des gènes de la réponse au stress du RE, observée dans d’autres études et sur d’autres types cellulaires n’a pas été retrouvée dans cette étude.- une approche globale d’étude transcriptomique différentielle dans des fibroblastes primaires de patients eIF2B-mutés soumis ou non à un stress cellulaire. La comparaison du transcriptome avec celui de contrôles sains et de patients porteurs d’une autre leucodystrophie n’a pas permis de mettre en évidence un effet spécifique du stress dans les fibroblastes eIF2B-mutés. En revanche, il a pu être montré une dérégulation de l’expression de 70 gènes spécifiquement dans ces fibroblastes ainsi que l’implication de voies métaboliques telles que l’épissage et la stabilité des ARNm, importantes au cours du développement du système nerveux central. Ces gènes trouvés dérégulés dans les fibroblastes, appartenant notamment à la famille des hnRNP, ont été ensuite validés dans les cerveaux de patients eIF2B-mutés et une anomalie d’épissage de certains transcrits importants pour les cellules gliales a également été identifiée.- enfin, pour valider l’hypothèse d’une anomalie développementale des cellules gliales, le modèle des cellules souches embryonnaires (ESC) a été utilisé et un défaut génétique a été introduit dans ces cellules afin de mimer les mutations eIF2B. Une anomalie de différentiation de ces ESC en cellules gliales a pu être mise en évidence dans ce modèle qui pourrait alors constituer un outil de choix pour tester des molécules pouvant potentiellement améliorer la différenciation de ces cellules, principales en cause dans cette pathologie. / EIF2B-related disorders are an autosomal recessive leukodystrophy caused by mutations in the ubiquitary eIF2B factor. This one is involved in the translation initiation step and its regulation, particularly upon cellular stresses, thanks to its guanine nucleotide exchange factor (GEF) activity. A wide continuum clinical and mutational spectrum has been described for this pathology.The decrease of eIF2B GEF activity has been validated as an eIF2B-pathies specific biomarker in affected patients’ lymphoblasts with 100% specificity and 89% sensibility using a threshold at 77.5%.Functional molecular mechanisms involved in the physiopathology of eIF2B-related disorders have been searched by three approaches:- the first one focalized on the study of the endoplasmic reticulum stress response in lymphoblasts from eIF2B-mutated patients. The translational hyper-induction of specific genes involved in the unfolded protein response, identified in other cell types, was not observed in this study.- a global approach using a differential transcriptomic study of primary fibroblasts from eIF2B-mutated patients submitted or not to a cellular stress. The comparison with the transcriptomic profile of fibroblasts from healthy controls and patients presenting with other types of leukodystrophies not allowed us to identify a specific stress effect in eIF2B-mutated fibroblasts. On the other hand, it has been shown 70 genes specifically differentially deregulated in eIF2B-mutated fibroblasts as well as metabolic pathways implication, like splicing and mRNA stability, that are critical during the central nervous system development. We then validated that these genes, belonging the the hnRNP family, were also deregulated in brains from eIF2B-mutated patients and a splice abnormality of genes implicated in glial cells network has also been identified.- finally, in order to validate the hypothesis of an abnormal glial cell development, the embryonic stem cells (ESC) model has been used and a genetic default has been introduced in these cells to mimic eIF2B mutations. We identified an abnormal differentiation of these ESC into glial cells. Therefore, this model would provide a unique tool to search therapeutic agents that would improve glial cell differentiation, the major cells implicated in this pathology.

A domesticação dos cães produziu-se simultaneamente em várias partes do globo o que ocasionou, o aparecimento por seleção de várias raças. Desde então o cão passou a ser utilizado para várias e diferentes tarefas, dentre elas acompanhar o homem, que usufruiu da sua conveniência, descobrindo que muitas vezes ambos podem sofrer dos mesmos males. Cães da raça Golden Retriever apresentam uma doença geneticamente degenerativa, homóloga a distrofia muscular de Duchenne (DMD) no homem; ambas doenças afetam o gene que produz a distrofina; uma proteína citoesquelética múscular. Uma possível forma de fornecer uma cópia normal do gene para os grupos musculares afetados de um indivíduo consiste no transplante de células tronco os quais podem ser obtidas de células embrionárias, células germinativas, células do sangue de cordão umbilical, células de medula óssea e células de sangue periférico. Estudos com modelos animais tem mostrado que transplante de células tronco fetais ou células tronco pluripotentes podem ter sucesso no tratamento de muitas doenças crônicas, sendo assim, objetivamos delinear uma linha de tratamento para distrofia muscular em cães da raça Golden Retriever, mediante caracterização e uso das células germinativas embrionárias para terapia celular. Foram utilizados 16 fêmeas sem raça definida (SRD), e as cadelas foram selecionadas a partir do exame citológico; as fêmeas foram inseminadas artificialmente, e após 30 dias de gestação os animais foram castrados pela técnica de ovário-salpingohisterectomia. Os embriões coletados possibilitaram a obtenção e estabelecimento de células tronco germinativas embrionárias, de fibroblastos fetais, de células musculares, os quais analisamos através de citometria de fluxo, interação no co-cultivo de células musculares caninas e células germinativas embrionárias e a imunopositividade das células na detecção de Oct-4. Os resultados nos possibilitam afirmar que em embriões com 22 dias de idade gestacional a região paramesonéfrica apresenta-se indiferenciada, diferentemente do que encontramos com 24 dias de idade, no qual o rim primitivo apresenta-se visível diferenciado. As células tronco germinativas embrionárias apresentaram colônias compactas e com alta proliferação de células mononucleares indiferenciadas e que as células tronco germinativas embrionárias apresentaram como principal problema a manutenção das culturas por períodos significativos. / The canine domesticity generated simultaneously in different parts of the World, that created, the begin of selection of many breeds. Since that time, dogs become to be used for different works, since follow men, that usufructed their convinience discovering most of the time that both are soffering the same ill. Dogs from the Golden Retriever breed presented a degenerative and genetically disease, homologous to Duchenne Muscular Dystrophy (DMD) in human, the dystrophin gene affection; a muscle citosckeletical protein. A possibility way to supply a correct gene shape for the affected muscle could be from the stem cell therapy from embrionic stem cell, germ cells, umbilical cord blood cells, bone marrow and perific blood. Researches with animal models are showing sucess on the treatment with fetal stem cells or pluripotents ones in different types of cronic illness, then, we aimed a treatment of the Golden Retriever Muscular Dystrophy using embrionic germ cells meantime characterization and their use on cell therapy. Were uses 16 females crossbreed (SRD), bitches were selected by the vaginal cytology exams; females were artificially inseminated and after 30 days of pregancy, the animals were histectomized. Embryos were collected to stabilish embrionic germ cells, canine fibroblasts, muscle cells, which were analysed by flow cytometre, co culture and OCT-4 detection. The results showed the paramesonephic region of embryos with 22 days of pregnancy presents undifferentiate cells(germ cells), what differs from embryos with 24 days, which primitive kidneys presented differentianted types of cells. Under culture conditions, these cells formed compact colonies with high proliferative potential, but without capacity of maintenance after 30 days.

Os microRNAs (miRs) desempenham um papel importante na biologia das células-tronco por meio da interação com seus mRNAs alvos, induzindo inibição da tradução e/ou degradação destes transcritos. Durante a diferenciação de células pluripotentes, os miRs podem ser induzidos ou reprimidos, no entanto, suas funções específicas são amplamente inexploradas. Nós investigamos os papéis funcionais de um conjunto selecionado de miRs na pluripotência e diferenciação celular, usando microscopia de fluorescência quantitativa (High Content Analysis). Para isso, foram empregadas a NTera-2 (células de carcinoma embrionário humano, CCE) e a H1 (células-tronco embrionárias humanas, CTEh) como modelos. Essas células foram transfectadas reversamente com trinta moléculas de miRs distintas (individualmente) ou moléculas controles. Após 3-4 dias de cultura, as células foram fixadas, permeabilizadas e coradas com Hoechst / CellMask Blue (núcleo/citoplasma), anti-OCT4, anti-Ciclina B1 e imageadas com um sistema ImageXpress Micro HCA. O CellProfiler foi utilizado para quantificar vários parâmetros morfométricos e medidas de intensidade de OCT4 e Ciclina B1 em compartimentos nucleares e citoplasmáticos. Esses dados foram usados para gerar perfis fenotípicos multiparamétricos específicos de cada miR (usando KNIME) e o agrupamento desses dados levou à identificação de vias e processos envolvidos na indução de características de pluripotência ou diferenciação celular causadas por miRs com efeitos fenotípicos similares. Como exemplo, as vias de PI3K-AKT, WNT, TGF? e DICER foram encontradas como moduladas por alguns clusters fenotípicos e os transcritos de alguns alvos foram avaliados por qPCR para validar os achados. Parte do trabalho foi focada na regulação da via Notch por miRNAs em células pluripotentes, o que levou à observação de que o miR- 363-3p inibe a sinalização de Notch e promove pluripotência nessas células. A transfecção de miR-363-3p não apenas elevou as características de pluripotência em NTera-2 e H1, mas também protegeu as CCE da diferenciação induzida por cocultivo com OP9 expressando DLL1 e causou a diminuição no nível de transcritos de PSEN1. Em conclusão, o ensaio desenvolvido aqui provou ser uma ferramenta robusta na detecção de mecanismos moleculares, baseando-se na combinação de análises fenotípicas funcionais e bioinformáticas. / microRNAs (miRs) play an important role in stem cell\'s biology by binding to target mRNAs transcripts, inducing translation blockage and/or transcripts degradation. Upon differentiation of pluripotent cells, miRNAs can be induced or repressed, however, their specific roles are largely unexplored. We investigated the functional roles of a selected set of miRs in pluripotency and differentiation, using quantitative automated fluorescence microscopy (High Content Analysis). For this, we used NTera-2 (human embryonal carcinoma cells, ECC) and H1 (embryonic stem cells; ESC) as models. These cells were reverse-transfected with thirty distinct miRs mimics (individually) or control molecules. Following 3-4 days of culture, cells were fixed, permeabilized and stained with Hoechst/CellMask Blue (nucleus/cytoplasm), antiOCT4, anti-Cyclin B1 and imaged using an ImageXpress Micro HCA System. CellProfiler was used to quantify several morphometric parameters and intensity measurements of OCT4 and CYCB1 in nuclear and cytoplasmic compartments. Quantified parameters were used to generate miR-specific multiparametric phenotypic profiles (using KNIME) and clustering these data led to identification of pathways and processes involved in the induction of pluripotency or cell diferention features caused by miRs with similar phenotypic effects. As an example, PI3K-AKT, WNT, TGF? and DICER pathways were found to be regulated by some phenotypic clusters and transcripts level of some of miR targets were evaluated by qPCR to validate de findings. Part of the work was focused in the regulation of Notch pathway by miRNAs in pluripotent cells, which led the observation that miR-363-3p inhibits Notch signaling and promotes pluripotency feature, as the transfection with miR-363-3p mimic not only enhanced pluripotent phenotype in NTera-2 and H1, but also protected de ECCs from differentiation induced by coculture with OP9 expressing DLL1 and decreased PSEN1 transcripts level.In conclusion, The assay developed here proved to be a robust tool in the detection of molecular mechanisms based on combined functional phenotypic and bioinformatic analyzes.

As células-tronco são capazes de se diferenciarem em praticamente todos os tipos celulares, podendo ser utilizadas em terapias de substituição em várias doenças. Células de linhagens hepáticas embrionárias e fetais pode ser uma fonte importante para a terapia celular em indivíduos com doenças hepáticas, pois possuem um alto índice de diferenciação em hepatócitos e células do ducto biliar. O objetivo deste trabalho foi avaliar o potencial e o controle da resposta proliferativa de células do broto hepático de ratos Fischer 344 em cultura. A obtenção das células do broto hepático foi realizada nos períodos 12,5; 14,5 e 16,5 dias de gestação e os fragmentos foram cultivados em meio DMEM-F12. A caracterização morfológica foi realizada em microscopia invertida de luz e eletrônica de varredura. A caracterização dos marcadores de células mesenquimais, do citoesqueleto, progressão e fases do ciclo celular, morte celular, e do potencial elétrico mitocondrial foram realizadas por citometria de fluxo. A função bioquímica foi realizada pela análise das transaminases hepáticas e pela produção de radicais livres lipoperoxidados. Os resultados encontrados no acasalamento dos ratos isogênicos da linhagem Fischer 344 seguiu o protocolo de 12 h de luz, alcançando o índice reprodutivo satisfatório e reprodutível. O isolamento e separação do broto hepático desta linhagem de ratos permitiu a obtenção, expansão e caracterização de uma cultura primária nos diferentes dias de gestação 12,5; 14,5 e 16,5. Os aspectos morfológicos encontrados foram de células fusiformes do tipo fibroblast-like para todos os períodos de gestação em cultura. As análises das transaminases hepáticas TGO e TGP, mostraram se em concentrações menores no período 12,5 dias de gestação. A expressão dos marcadores de células-tronco de origem mesenquimais (CD90, Nanog, Oct ¾ e STRO1), marcadores do citoesqueleto (CK8, CK18 e Desmina), marcadores envolvidos na checagem e progressão do ciclo celular (P53, P21, P27 e Ciclina D1) e marcadores envolvidos na morte celular (Anexina V/PI, Caspase 3, Bax, Bad e Bcl2) mostraram diferencialmente expressos, nos diferentes períodos gestacionais. A análise do potencial elétrico mitocondrial nos períodos de gestação de 14,5 e 16,5 dias, foi maior na proporção de células inativas com menor capacidade funcional ou metabólica, quando comparada ao período de 12,5 dias ou mesmo em relação ao hepatócito normal de um rato adulto. Análise das fases do ciclo celular observou-se uma concentração de célula na fase G0/G1, repercutindo na modulação da capacidade de proliferação e aumento na proporção de células com DNA fragmentado, nas CBH no período de 16,5 dias em comparação aos demais períodos e ao hepatócito normal. O aumento da fragmentação do DNA em média de 3,5 e 2,3 vezes, respectivamente nos períodos de 12,5 e 14,5 dias de gestação. A capacidade de síntese e de divisão celular das CBH foi mantida em todos os períodos de gestação. Os radicais livres lipoperoxidados mostraram quantidades insignificantes em CBH nos diferentes dias de gestação. / Stem cells are able to differentiate into virtually all cell types and can be used in replacement therapies in various diseases. Cells of embryonic and fetal liver lines can be an important source for cell therapy in patients with liver disease because they have a high rate of differentiation into hepatocytes and biliary duct cells. The aim of this study was to evaluate the potential and control of the proliferative response of liver bud cells during the maturation of hepatocytes in culture. The acquirement of liver bud cells was performed for 12.5, 14.5 and 16.5 days of gestation and the fragments were cultured in DMEM-F12. Morphological characterization was performed on inverted light microscopy and scanning electron microscopy. The characterization of mesenchymal cell markers, cytoskeleton, and progression stages of the cell cycle, cell death and mitochondrial electric potential were performed by flow cytometry. The biochemical function was performed by analysis of liver transaminases and the production of free radicals lipoperoxidados. The results found in rats\' mating isogenic Fischer 344 followed the protocol of 12 hours of light reaching the reproductive rate satisfactory. The isolation and separation of the liver bud of this strain of mice allowed the isolation, expansion and characterization of a primary culture at different days of gestation, 12.5, 14.5 and 16.5 days. The morphological features were found of spindle cell type to fibroblast-like cells of the liver bud in culture. Analyses of hepatic transaminases GOT and GPT showed lower concentrations in the period 12.5 days of gestation. The expression of stem cell markers of mesenchymal origin (CD90, Nanog, Oct STRO1 and ¾), cytoskeletal markers (CK8, CK18 and desmin) markers involved in checking and cell cycle progression (P53, P21, P27 and Cyclin D1) and markers involved in apoptosis (Annexin V / PI, caspase 3, Bax, Bad and Bcl2) showed differentially expressed in different gestational periods. In the analysis of mitochondrial electrical potential in the gestation periods of 14.5 and 16.5 days, it was observed the higher proportion of quiescent cells with lower metabolic of functional capacity when compared to the periodo of 12.5 days or even compared to a normal hepatocyte adult rat. In the analysis of cell cycle phases it was observed the concentration of cell in the G0/G1 phase, resulting in modulation of proliferation capacity and the increase in the proportion of cells with fragmented DNA, CBH in the period 16.5 days compared to other periods and the normal hepatocyte. The increase of DNA fragmentation on average 3.5 and 2.3 times respectively in the periods of 12.5 and 14.5 days of gestation. The synthesis and cellular division of CBH was maintained in all stages of pregnancy. The free radicals lipoperoxidados showed insignificant amounts of CBH in the days of gestation.

Congenital hypothyroidism (CH) is the most frequent of the rare endocrine diseases (e.g. Addison's disease, Cushing's syndrome, Congenital adrenal hyperplasia.), which affects 1:2000 – 4000 newborns. If not immediately diagnosed after birth, thyroid hormones deficiency causes severe defects in brain and skeletal development leading to a complex clinical scenario called cretinism. CH can be due to a defective synthesis of thyroid hormones (dyshormonogenesis) or an abnormal embryonic development of the gland. Data obtained using knockout mouse models have shown the pivotal role of four specific transcription factors (NKX2.1, PAX8, FOXE1 and HHEX) for the correct organogenesis or function of the gland. Although mutations in those genes have been identified in few cases of CH patients, the pathogenetic mechanisms remain still elusive in the vast majority of CH cases (95%).<p>For the identification of new genes and molecular events controlling thyroid organogenesis it would be useful to develop an in vitro cellular model to recapitulate thyroid embryogenesis in a dish. Embryonic Stem Cells (ESCs) have recently emerged as system model to recapitulate the embryogenesis of several tissues in vitro.<p>Induced overexpression of defined transcription factors has been shown to have a directing effect on the differentiation of pluripotent stem cells into specific cell types. In this thesis I show that a transient overexpression of the transcription factors NKX2.1 and PAX8 is sufficient to direct the differentiation of murine ESCs into thyroid follicular cells (TFC) and promotes in vitro self- assembly of TFC into three-dimensional follicular structures, when associated to a subsequent thyrotropin (TSH) treatment. Cells differentiated by this protocol showed significant iodide organification activity, a hallmark of thyroid tissue function. Importantly, athyroid mice grafted with mESC-derived thyroid follicles show normalization of plasma T4 levels with concomitant decrease of plasma TSH. In addition, a full normalization of body temperature at 4 weeks after transplantation was observed. Together, these data clearly demonstrate that grafting of our mESC-derived thyroid cells rescues the hypothyroid state and triggers symptomatic recovery along with the normalization of plasma hormone concentrations. The high efficiency of TFC differentiation and follicle morphogenesis in our system will provide an unprecedented opportunity for future studies to decipher regulatory mechanisms involved in embryonic thyroid development, a major research need towards an improved understanding of the molecular mechanisms underlying congenital hypothyroidism, the most common congenital endocrine disorder in humans. / Doctorat en Sciences biomédicales et pharmaceutiques / info:eu-repo/semantics/nonPublished

Le métabolisme des cellules souches embryonnaires est étroitement régulé par un équilibre entre<p>auto-renouvellement et différenciation. Ces cellules peuvent proliférer en culture de manière prolongée,<p>tout en restant indifférenciées, mais cela peut engendrer l’apparition d’anomalies karyotypiques, qui<p>accentuent la prolifération de ces cellules au détriment de leur potentiel de différenciation. Ce<p>phénomène d’adaptation à leurs conditions de culture et leurs caractéristiques communes avec les<p>cellules cancéreuses sont deux preuves majeures de la nature tumorigène de ces cellules souches.<p>Le but de ce travail a été d’élucider les voies de signalisation qui contrôlent le métabolisme des<p>cellules souches embryonnaires humaines, et plus particulièrement, leur différenciation. De plus, nous<p>avons souhaité étudier le caractère tumorigène de ces cellules et pour cela, nous avons travaillé en<p>comparant différentes lignées de cellules souches embryonnaires avec une lignée de carcinome<p>embryonnaire humain, leurs correspondantes cancéreuses. Nous avons choisi d’étudier la voie des<p>dérivés de l’inositol, dont la composante PI3K/AKT avait déjà été auparavant associée avec le<p>métabolisme des cellules souches embryonnaires murines, tout comme la composante des inositols<p>phosphates solubles qui avait été impliquée dans le contrôle de l’auto-renouvellement de ces cellules.<p>Nous avons tout d’abord étudié la distribution des inositols phosphates dans ces différents<p>modèles par HPLC et observé que leur profil différait entre les cellules souches embryonnaires normales<p>et cancéreuses, principalement au niveau de la quantité d’InsP5. L’analyse du profil des InsPs en cours de<p>différenciation spontanée a permis par la suite de mettre en évidence des modulations de ces différents<p>métabolites, avec notamment une diminution reproductible d’InsP5. Nous basant sur l’hypothèse que ces<p>modulations devaient se refléter au niveau de l’expression des enzymes régulant la production des<p>inositol phosphates, nous avons entamé une analyse par qPCR des kinases et phosphatases principales<p>impliquées dans cette voie. Nous avons effectivement pu mettre en évidence une augmentation<p>significative de deux isoformes de la triphosphate 3-kinase, ITPKB et ITPKA, en cours de différenciation<p>spontanée. Ces deux enzymes sont également davantage exprimées dans les cellules souches cancéreuses.<p>Ces augmentations d’expression ont ensuite pu être confirmées au niveau protéique pour ITPKB et au<p>niveau de leur activité enzymatique. Par ailleurs, au cours de ce travail, nous avons également mis au<p>point un modèle de différenciation dirigée de nos cellules souches embryonnaires vers des cellules<p>souches mésenchymateuses, que nous avons entièrement caractérisées et dont nous avons pu mettre en<p>évidence les propriétés immunomodulatrices. Des résultats préliminaires sont venus confirmer, dans ce<p>modèle, l’augmentation d’ITPKB préalablement observée en cours de différenciation spontanée.<p>Nous avons également montré que l’expression du gène suppresseur de tumeur PTEN était<p>augmentée en cours de différenciation spontanée des cellules souches embryonnaires humaines. A l’aide<p>de la technique d’immunofluorescence, nous avons mis en évidence une localisation subcellulaire<p>différente de PTEN dans nos cellules souches embryonnaires normales par rapport à leur<p>correspondantes cancéreuses ainsi qu’une plus faible expression de PTEN dans ces dernières, confirmant<p>ainsi nos résultats obtenus précédemment par qPCR. PTEN est le principal inhibiteur de la voie<p>PI3K/AKT dont nous avons également disséqué l’expression des effecteurs majeurs par qPCR. Nous<p>avons notamment mis en évidence une augmentation de l’expression des unités régulatrices p85α et<p>catalytique p110β en cours de différenciation. Ces mêmes enzymes étaient également surexprimées dans<p>les cellules de carcinome embryonnaire préalablement différenciées à l’aide d’acide rétinoïque.<p>En conclusion, l’ensemble de ces résultats met en évidence une modulation des voies de<p>signalisation dérivées de l’inositol en cours de différenciation spontanée et dirigée des cellules souches<p>embryonnaires, suggérant leur implication dans le contrôle de la différenciation de ces cellules. Nous<p>avons également observé des différences entre les cellules souches embryonnaires normales et<p>cancéreuses, dont l’étude devra être approfondie afin d’évaluer l’impact de ces divergences sur le risque<p>de transformation cancéreuse des cellules souches embryonnaires humaines. / Doctorat en Sciences agronomiques et ingénierie biologique / info:eu-repo/semantics/nonPublished

During embryonic development, multipotent cardiovascular progenitor cells (MCPs) are specified from early mesoderm. Although the core cardiac transcriptional machinery acting during cardiac cell differentiation is relatively well known, the molecular mechanism acting upstream of these cardiac transcriptional factors, and promoting cardiac progenitor specification from early mesoderm remains poorly understood. We used embryonic stem cell (ESC) differentiation as a model to dissect the molecular mechanisms implicated in cardiovascular progenitor specification. Using ESCs, in which gene expression can be temporally regulated, we showed that transient expression of Mesp1 dramatically accelerates and enhances multipotent cardiovascular progenitor specification through an intrinsic and cellular autonomous mechanism. Using genome wide transcriptional analysis, we found that Mesp1 rapidly activates and represses a discrete set of genes. Using chromatin immunoprecipitation, we showed that Mesp1 directly binds to regulatory DNA sequences located in the promoter of many key genes belonging to the core cardiac transcriptional machinery, resulting in their rapid upregulation. Mesp1 also directly and strongly represses the expression of key genes regulating other early mesoderm and endoderm cell fates. Using engineered ESC expressing the green fluorescent protein under the control of the Mesp1 promoter, we isolated Mesp1 expressing cells in differentiating ESCs allowing characterization of the cellular and molecular mechanisms underlying cardiovascular specification. Our results demonstrate that Mesp1 acts as a key regulatory switch during cardiovascular specification, residing at the top of the hierarchy of the gene network responsible for cardiovascular cell fate determination. Moreover our results place Mesp1 upstream of the specification of both first and second heart fields and provide novel and important insights into the molecular mechanisms underlying the earliest step of cardiovascular specification. We identified cell surface markers expressed allowing the isolation of early cardiovascular progenitors and provide potentially novel methods for dramatically increasing the number of cardiovascular cells for cellular therapy in humans. / Doctorat en sciences médicales / info:eu-repo/semantics/nonPublished

Le sujet de ce travail de thèse a concerné l'analyse de l’immunogénicité de progéniteurs cardiaques issus de cellules souches embryonnaires humaines. Le but a été double. D’une part, comprendre les mécanismes cellulaires et moléculaires qui sous-tendent cette immunogénicité et, d’autre part, mettre en place des stratégies d’immuno-intervention permettant de la surmonter.Le travail a comporté deux volets, l’un in vitro et l’autre in vivo utilisant des modèles expérimentaux murins. Les analyses in vitro, ont utilisé une méthode de culture lymphocytaire mixte où des progéniteurs cardiaques humains ont été mis en culture avec des lymphocytes allogéniques. Les résultats ont montré que les progéniteurs cardiaques sont effectivement immunogènes et que la réponse immunitaire qu’ils suscitent peut-être modulée efficacement par des cellules mésenchymateuses dérivées du tissu adipeux. De plus, nous avons confirmé l’expression des molécules d’histocompatibilité de classe I à la surface de progéniteurs cardiaques, une expression qui semble modulée au cours de la culture.Les modèles in vivo que nous avons utilisés ont consisté en l’implantation de corps embryoïdes et des progéniteurs cardiaques de souris dans un contexte allogénique. Divers sites d’implantation ont été utilisés (myocarde, capsule rénale, muscle gastrocnemius) chez des souris immunocompétentes. Les résultats ont montré qu’à la fois les corps embryoïdes et les progéniteurs cardiaques sont rejetés chez les receveurs immunocompétents non traités, avec une cinétique différente en fonction du site d’implantation. Par ailleurs, l’utilisation d’un traitement par anticorps anti-CD3, appliqué à différents temps suivant l’implantation nous a permis de prolonger la survie des cellules implantées en induisant, en fonction de la fenêtre thérapeutique, soit une immunosuppression soit une tolérance immunitaire. / The present work concerned the analysis of the immunogenicity of cardiac progenitors derived from human embryonic stem cells. Our aim was to understand the cellular and molecular mechanisms which underlie this immunogenicity and to surmount it by setting up strategies of immune-intervention. The study consisted in two major components, one in vitro and the other in vivo using experimental mice models. The in vitro analyses were assessed by the mixed leukocyte reaction method, where human cardiac progenitors were cultured with allogeneic lymphocytes. The results showed that the cardiac progenitors are indeed immunogenic and that the immune response that they induce could be modulated by mesenchymal stromal cells derived from adipose tissue. Moreover, we confirmed the expression of class I histocompatibility molecules on the surface of cardiac progenitors, an expression which seems modulated during the culture. The in vivo models that we used consisted of the grafting of embryoïdes bodies and cardiac progenitors derived from mouse embryonic stem cells in an allogeneic context. Cells were grafted in different sites of immunocompetent mice (myocardium, renal capsule, muscle gastrocnemius). The results showed highlighted that at the same time both embryoïdes bodies and cardiac progenitors are rejected among untreated immunocompetents hosts, whereas their survival is extended by anti-CD3 treatments, In addition, anti-CD3 treatment prolongs the survival of grafted cells, either by immunosuppression or by inducing immune tolerance according to the timing when it is applied.

Les cellules souches embryonnaires de souris (mESC) présentent un cycle cellulaire atypique caractérisé par l'absence d'une voie Rb fonctionnelle et la forte expression de la cycline E pendant toutes les phases du cycle cellulaire. En conséquence, les mESC sont constitutivement amorcées pour la réplication de l'ADN. Pour comprendre comment la cycline E, un régulateur clé de la transition de la phase G1 à S, est régulée dans les mESC, nous avons analysé la régulation transcriptionnelle de son gène Ccne1 par des facteurs de transcription du réseau de pluripotence naïve. Nous avons observé que les facteurs Esrrb, Klf4 et Tfcp2l1 se lient à la région du promoteur de Ccne1 sur plusieurs sites situés entre 0 et 1kb en amont du site d'initiation de la transcription. Un test luciférase nous a permis de monter qu'une mutation de ces sites de liaison diminue ou abolie l'activité transcriptionnelle du promoteur. De plus, la surexpression inductible à la doxycycline des facteurs Esrrb, Klf4 et Tfcp2l1 augment le niveau d'expression d'ARNm de Ccne1. Ces résultats suggèrent que Esrrb, Klf4 et Tfcp2l1 contrôlent l'expression de la cycline E. Ils mettent en évidence un lien direct entre le réseau de pluripotence naïve et la régulation du cycle mitotique dans les mESC. Nous avons utilisé le système rapporteur FUCCI pour étudier en fonction du cycle cellulaire l'expression des facteurs de transcription qui forment le réseau de pluripotence naïve. Nous avons observé que l'expression de Esrrb, Klf4, Tfcp2l1 et Nanog oscille au cours du cycle cellulaire avec une diminution de l'expression entre la phase G1 précoce et le début de S, puis une ré-augmentation entre le début de S et la phase G2/M. Ces résultats suggèrent que le réseau de pluripotence naïve est déstabilisé transitoirement lors du passage de la phase G1 à la phase S du cycle cellulaire / Mouse embryonic stem cells (mESCs) display an unorthodox cell cycle characterised by the lack of a functional Rb pathway and robust expression of cyclin E during all cell cycle phases. Therefore, mESCs are constitutively primed for DNA replication. To understand how cyclin E, a key regulator of the G1-to-S phase transition, is regulated in mESCs, we analysed the transcriptional regulation of Ccne1 by transcription factors of the naive pluripotency network. We observed that Esrrb, Klf4 and Tfcp2l1 bound the Ccne1 promoter region on multiple sites between 0 and 1kb upstream transcription start site. Disrupting the binding sites reduced or abolished transcriptional activity in a luciferase assay. Moreover, the doxycyclin-inducible expression of Essrb, Klf4 and Tfcp2l1 up-regulated the Ccne1 mRNA level. Taken together, these results strongly suggest that Essrb, Klf4 and Tfcp2l1 control Cyclin E expression and highlight a direct connection between the naïve pluripotency network and regulation of the mitotic cycle in mESCs. We used the FUCCI reporter system to study cell-cycle dependent expression of the transcription factors that form the naïve pluripotency network. Esrrb, Klf4, Tfcp2l1 and Nanog expression oscillated during the cell cycle with a down-regulated expression between the early G1-phase and the beginning of S-phase, and then up-regulated expression between the beginning of S-phase and the G2/M-phase. These results suggest that the naive pluripotency network is destabilized transiently during the transition from the G1-phase to the S-phase of the cell cycle