The species composition of planktonic communities is determined not only by abiotic factors, such as nutrient availability, temperature, and water column stratification but also by biotic interactions between hosts and parasites, predators and prey, and among competitors. Blooms of the red tide dinoflagellate, Karenia brevis, can dramatically alter the planktonic community, reaching densities of millions of cells per liter and occurring nearly monospecifically. I investigated whether K. brevis uses chemical compounds to defend against grazing or to inhibit the growth of competitors. Because K. brevis is known to produce brevetoxins which act as potent neurotoxins in mammals, I also investigated whether brevetoxins played a role in competition or predator resistance. Experiments revealed that copepods fed diets rich in Karenia brevis experienced lowered fitness, however, nutritional inadequacy, rather than toxicity, was responsible for the decrease in grazer fitness. Compounds exuded from natural samples of K. brevis blooms did, however, inhibit the growth of four of five model competitors. Compounds exuded from K. brevis cultures were similarly allelopathic to competitors. Exposure to these allelopathic compounds resulted in lowered photosynthetic efficiency of all competitors, and decreased cell membrane integrity of three competitors. The allelopathic potency of K. brevis blooms was variable between collections and years, but allelopathy did not correlate with bloom density or concentration of brevetoxins. However, the variability of allelopathy could partially be explained by the presence of specific competitors. The diatom Skeletonema costatum reduced the growth-inhibiting effects of K. brevis bloom exudates, suggesting that S. costatum has a mechanism for undermining K. brevis allelopathy. Allelopathic compounds exuded by K. brevis that inhibited the growth of the diatom Asterionellopsis glacialis were partially characterized. K. brevis produced multiple, polar, organic compounds that inhibited A. glacialis growth. Exuded brevetoxins, on the other hand, had no effect on A.glacialis growth. Taken together, these results indicate that K. brevis is not chemically defended against grazing, but does produce yet-unidentified allelopathic compounds that inhibit the growth of competing phytoplankton. Blooms of K. brevis may be facilitated by the exudation of potent allelopathic compounds, but the specific phytoplankton assemblage has the potential to alter bloom dynamics.

For over ten years the Western Basin of Lake Erie has been plagued by significant harmful algal blooms (HABs). Lake Erie is a body of water situated between the United States of America (USA) and Canada. The lake provides water to approximately 40 million people and is a considerable source of economic value. The Western Basin of Lake Erie is highly prone to HABs due to the shallow depth and large phosphorus (P) loads received from the large area of agricultural land surrounding the lake and its tributaries. HABs cause extensive ecosystem degradation, have multiple negative health impacts, and cause significant economic losses for the tourism and fishery industries. Five products with P load reducing properties from the three nutrient control categories (biological, physical, and chemical) were chosen to determine how effective their P load reduction pathways were. Additionally, these products were analyzed to determine if they could generate positive remediation effects on the Lake Erie HAB. Of these five products, the technologies Water 3.0 and PO4 Sponge were applied to a Western Basin HAB model generated using the Stella Professional software from ISEE Systems. The two products were modeled individually and collectively to compare the application effects on the HAB model. The model results illustrate the significant reduction in P load and HAB extent that the application of these products at wastewater treatment plants (WWTPs) and within waterways could have. The application of both products at multiple locations within the model showed the greatest P load reduction and nearly eliminated the HAB extent. Unfortunately, the residual P from extensive historical P loading into the lake would prevent such a significant reduction from occurring for over a decade. Current practices and regulations in the Lake Erie Basin are not stimulating P load reductions significant enough to remediate the HAB. As the Western Basin HAB continues to occur annually, the waste stream produced by the HAB remains unutilized. Implementing new and innovative technologies in the basin can generate high quality commodity streams out of the wasted biological algal matter. Meanwhile the implementation of new technologies and practices can help reduce the HAB to a smaller size that would have smaller negative impacts to the economy, health, and ecology.

No description available.

No description available.

An increase in marine mammal stranding and die-off events has been observed along the California coast. The exact cause to explain for these recent events is unknown, but El Niño and harmful algal blooms are established sources for temporary decreases in marine mammal health. To determine whether El Niño could be causing and amplifying harmful algal blooms, particularly in Monterey Bay where they occur frequently, data was analyzed from the Marine Mammal Center in Sausalito, California. Data analysis focused on California sea lions (Zalophus californianus), because they have the largest data set and are directly affected by harmful blooms from domoic acid. Results indicated that El Niño events could be significantly harming California sea lions in Monterey Bay during the fall season. Because agricultural runoff is a known factor in causing harmful algal blooms and Monterey Bay experiences them consistently, online research was conducted on agricultural activity, agricultural runoff and nitrogen contamination from fertilizer in the water-sheds surrounding Monterey Bay. Nitrogen contamination from agricultural use is a prominent issue, therefore, I proposed some possible solutions, including cap and trade, a water recycling plant, and eco-certification, to minimize nitrogen’s impact on the environment and wildlife while allowing farmers to continue using nitrogen on crops.

Les dernières décennies ont été marquées par l’intensification et l’expansion des efflorescences de micro-algues toxiques (HAB). Connues pour perturber les écosystèmes côtiers et pour leur toxicité sur les organismes marins, les HAB sont suspectées d’être à l’origine de défauts de recrutement de bivalves. Cette thèse avait pour objectif d’étudier les conséquences des efflorescences du dinoflagellé toxique Alexandrium minutum, producteur de toxines paralysantes (PST) et des composés bioactifs extracellulaires (BEC), sur la reproduction, le développement et le recrutement de l’huître Crassostrea gigas, une espèce à l’importance économique majeure. Les gamètes libres et les jeunes stades de développement se révèlent être les plus sensibles, en particulier aux BEC produits par A. minutum qui inhibent la fécondation et l’embryogenèse. A. minutum modifie le comportement des larves véligères, provoque une diminution de leur filtration, de leur croissance et du taux de fixation. Une exposition des adultes, pendant la gamétogenèse, affecte le développement des descendants, traduisant des altérations du contenu gamétique et/ou un transfert vertical des PST. Les modalités d’action des PST et des BEC devront être précisées. Nos expérimentations, réalisées à des concentrations de micro-algues rencontrées dans l’environnement, suggèrent que des efflorescences récurrentes d’A. minutum lors des périodes de reproduction et de développement larvaire pourraient, sur le long terme, affecter la structure des populations naturelles et cultivées de C. gigas. / Recent decades have witnessed the intensification and spread of harmful algal blooms (HAB). HAB are known to disrupt coastal ecosystems and to be toxic for marine organisms. These phenomena are also suspected to be responsible for recruitment failures of bivalves. The aim of this PhD was to study the consequences of blooms of toxic dinoflagellate Alexandrium minutum on the reproduction, development and recruitment of the oyster Crassostrea gigas, a species of major economic importance. A. minutum is known to produce paralytic shellfish toxins (PST) and bioactive extracellular compounds (BEC). Gametes and early life stages were the most sensitive, particularly to the bioactive extracellular compounds (BEC) produced by A. minutum, which inhibited fertilization and embryogenesis. A. minutum modified the behaviour of veliger larvae, decreased their filtration, growth and settlement. Exposure of adult oysters during gametogenesis affected the development of offspring, reflecting alterations in gamete content and/or vertical transfer of PST. Mode of action of PST and BEC are to further investigate. These oyster exposures, conducted at environmentally relevant concentrations of microalgae, suggest that recurrent blooms of A. minutum during oyster spawning and larval development could have long-term consequences on the structure of wild and cultured populations of C. gigas.

<p>The capacity of marine organisms to adapt to natural and anthropogenic stressors is an integral component of ocean health. Harmful algal blooms (HABs), which are one of many growing threats in coastal marine ecosystems, represent a historically present natural stressor that has recently intensified and expanded in geographic distribution partially due to anthropogenic activities. In the Gulf of Mexico, HABs of <italic>Karenia brevis</italic> occur almost annually and produce neurotoxic brevetoxins that have been associated with large-scale mortality events of many marine species, including the common bottlenose dolphin (<italic>Tursiops truncatus</italic>). The factors resulting in large-scale dolphin mortality associated with HABs are not well understood, particularly in regards to the seemingly different impacts of HABs in geographically disjunct dolphin populations. My dissertation investigates a genetic basis for resistance to HABs in bottlenose dolphins in central-west Florida and the Florida Panhandle. I used both genome-wide and candidate gene approaches to analyze genetic variation in dolphins that died putatively due to brevetoxicosis and live dolphins from the same geographic areas that survived HAB events. Using restriction site-associated DNA sequencing, I identified genetic variation that suggested both a common genetic basis for resistance to HABs in bottlenose dolphins across the Gulf coast of Florida and regionally specific resistance. Many candidate genes involved in the immune, nervous, and detoxification systems were found in close genomic proximity to survival-associated polymorphisms throughout the bottlenose dolphin genome. I further investigated two groups of candidate genes, nine voltage-gated sodium channel genes selected because of their putative role in brevetoxin binding and four major histocompatibility complex (MHC) loci selected because of their genomic proximity to a polymorphism exhibiting a strong association with survival. I found little variation in the sodium channel genes and conclude that bottlenose dolphins have not evolved resistance to HABs via mutations in the toxin binding site. The immunologically relevant MHC loci were highly variable and exhibited patterns of genetic differentiation among geographic regions that differed from neutral loci; however, genetic variation at the MHC also could not fully explain variation in survival of bottlenose dolphins exposed to HABs. In my final chapter, I consider the advantages and drawbacks of the genome-wide approach in comparison to a candidate gene approach and, as laid out in my dissertation, I recommend using both complementary approaches in future investigations of adaptation in genome-enabled non-model organisms.</p> / Dissertation

To initiate algal virus research in the Bay of Quinte, three stations were sampled biweekly throughout 2011. By targeting algal virus DNA polymerase, major capsid protein genes (MCP), and a Microcystis aeruginosa cyanophage (Ma-LMM01) tail sheath protein gene, PCR amplification revealed diverse and unique Phycodnaviruses (viruses of eukaryotic algae) and cyanophage. When analysed statistically, patterns of virus abundance suggested that the seasonality of any one virus cannot be generalised to predict that of other viruses, even among closely related viruses. This study also demonstrated a strong relationship between algal virus abundance and host biomass. It was found that despite the apparent heterogeneity of virus abundance across the Bay, virus abundance patterns clustered by sampling date and geographic location. By providing evidence for diverse algal viruses with complex seasonality, this work highlights significant gaps in the current understanding of Bay of Quinte phytoplankton ecology.

To initiate algal virus research in the Bay of Quinte, three stations were sampled biweekly throughout 2011. By targeting algal virus DNA polymerase, major capsid protein genes (MCP), and a Microcystis aeruginosa cyanophage (Ma-LMM01) tail sheath protein gene, PCR amplification revealed diverse and unique Phycodnaviruses (viruses of eukaryotic algae) and cyanophage. When analysed statistically, patterns of virus abundance suggested that the seasonality of any one virus cannot be generalised to predict that of other viruses, even among closely related viruses. This study also demonstrated a strong relationship between algal virus abundance and host biomass. It was found that despite the apparent heterogeneity of virus abundance across the Bay, virus abundance patterns clustered by sampling date and geographic location. By providing evidence for diverse algal viruses with complex seasonality, this work highlights significant gaps in the current understanding of Bay of Quinte phytoplankton ecology.

Indiana University-Purdue University Indianapolis (IUPUI) / Eagle Creek Reservoir (ECR), located in the Midwestern U.S., is a freshwater limnic system plagued by seasonal Harmful Algal Blooms (HABs) which generate water-fouling Geosmin (GSM) and 2-Methylisoborneol (MIB) Taste and Odor (T&O) compounds. Past investigations of T&O event dynamics have identified Actinomycetes as responsible for MIB production and several genera of cyanobacteria for GSM production. During 2018, a temporally and spatially expansive sampling regimen of the reservoir was carried out and a battery of biological, chemical, physical, and hyperspectral experiments performed. The resulting data was analyzed using time series, cross-correlation, lag time, and multivariate analyses as well as machine learning algorithms to pick apart and interrogate any relationships between HABs, T&O events, and environmental parameters. The results show that local weather and watershed conditions exert significant control over the state of the reservoir and the behavior of the algal community. GSM and MIB peaked during early May under well-mixed, cold, and nutrient-rich water column conditions, then declined under summer thermal stratification before making a small resurgence during late season mixing. Bloom die-off and decay was effectively ruled out as a mechanism controlling T&O concentrations, and no links were found between T&O concentrations and algal biomass. Strong evidence was found that GSM/MIB concentrations were a response by bloom microbes to changing nutrient conditions within the reservoir, and it was determined that nutrient fluxes from the watershed 30-40 days prior to peak T&O concentrations are likely instrumental in the development of the slow- ix growing microbes characteristic of the reservoir. Attempts were made to assess spatial and temporal variability but no significant spatial differences were identified; differences between sampling sites were far smaller than differences between different sampling dates. The findings here add to the growing body of literature showing T&O and HAB dynamics are more closely linked to the relative abundance and speciation of nutrients than other parameters. Additionally, these findings carry important implications for the management of ECR and other similar freshwater reservoirs while highlighting the importance of reducing watershed eutrophication.