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"2003". / Thesis (PhD)--Macquarie University, Division of Environmental & Life Sciences, Department of Biological Sciences, 2004. / Bibliography: leaves 136-160. / Introduction: The Antarctic environment; Antarctic inhabitants; Microfungi; Identification of microfungi; Physiological factors affecting Antactic microfungi; Flow cytometry and microfungi; Hydrolytic enzymes of industrial interest; Isolation of genes from microfungi; Aims of this study -- Materials and methods: Fungal strains and cultivation conditions; Molecular identification of fungal isolates; Fungal physiology; Hydrolase activity of secreted proteins; Gene cloning and expression -- Results and discussion: Microfungal identification; Physiological factors affecting Antarctic microfungi; Activity in microfungi when grown on solid media; Characterisation of hemicellulases from selected Antarctic microfungi; Cloning of an Antarctic Penicillium allii lipase gene and its expression in Trichoderma reesei -- Conclusions and future prospects. / The Antarctic occupies that region of the planet that falls below the 60th parallel of South latitude. Although it has been frequented by adventurers, journeyman scientists and tourists for the past 100 years, the Continent has remained virtually unoccupied. The intense cold, the absence of human occupation and the limited range of local higher animal species have combined to create the impression that the Continent is virtually devoid of life. -- Although the microbiota of the Antarctic has attracted some small level of attention in the past, the examination of filamentous microfungi has been largely overlooked and fallen to a small group of dedicated investigators. In this study it will be shown that far from being an insignificant component of the Antarctic network, microfungi represent a potentially large and so far untapped bioresource. -- From just 11 bryophyte samples collected at four sites in the Ross Sea/Dry Valleys region of Southern Antarctica, some 30 microfungal isolates were recovered. Using molecular techniques, the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA (nrDNA) was sequenced to reveal no less than nine unique microfungal species. For only two of these species did the ITS sequence data produce a 100% match with records held on the public databases. This investigation also highlighted the problems inherent in the traditional morphological identification system which are now being perpetuated in the molecular database records. -- A set of seven notionally identified isolates obtained from ornithogenic soil samples gathered in the Windmill Islands in Eastern Antarctica (offshore from the Australian Antarctic Division's Casey Station) were also subjected to molecular identification based on ITS sequence data. Each of the seven isolates was identified as a unique species; six were cosmopolitan in nature and the one remaining bore very little resemblance at the molecular level to any of the recorded species although it was provided with an epithet commonly used in the identification of Antarctic microfungal species. -- To evaluate their potential as a bioresource, samples of Antarctic microfungi were examined to determine if the same physiological factors common to mesophilic species also applied to their Antarctic analogues. It is known that when placed under stress, trehalose can act as a protectant against cold (cryoprotection) and dehydration in mesophilic yeasts and fungi. The level of trehalose produced by the Antarctic isolates and their mesophilic analogues when subjected to stress was compared. A similar comparison was made for the production of glycerol which is well established as a compatible solute providing protection to mesophilic species against osmotic stress. Only in the case of trehalose production by an Antarctic Embellisia was there any indication that either of these two compounds could play a significant role in providing protection to the Antarctic fungi against the rigours of their environment, which leaves open to question what in fact does. -- In the course of investigating the means by which Antarctic microfungi guard against the damage which can ensue when subjected to oxidative stress, flow cytometry was introduced as an investigatory tool. It was established that there is a window of opportunity during which flow cytometry can be used to undertake a detailed analysis of the early stages of fungal growth from germination through hyphal development. -- Of major significance in determining the potential of Antarctic microfungi as a resource is their ability to produce new and novel enzymes and proteins. The microfungal isolates were screened for hydrolytic activity on solid media containing indicative substrates and proved to be a fruitful source of enzymes active over a range of temperatures. A detailed characterisation of two hemicellulases, β-mannanase and xylanase, secreted into a liquid medium by a subset of the Antarctic fungi and a high producing mesophilic reference strain permitted direct comparisons to be made. It was shown that the maximum hemicellulase activity of the Antarctic strains occurred at least 10°C and as much as 30°C lower than that of the reference strain and that mannanase activity for two of the Antarctic isolates exceeded 40% of their maximum at 0°C. These assay results highlight the potential of Antarctic microfungi to yield novel cold-active enzymes. -- As a final measure of the capacity of the Antarctic to yield novel enzymes from its microfungal stock, a lipase gene was selected as a target for isolation and expression in a heterologous fungal host. Using PCR techniques, the gene of interest was isolated from an Antarctic isolate of Penicillium allii, transformed into the mesophilic production host Trichoderma reesei and the active protein successfully produced in the growth medium. The recombinant lipase was assayed and found to exhibit novel characteristics consistent with a cold-adapted enzyme. / Mode of access: World Wide Web. / 186 leaves ill

La quercétine (QCT) est un composé polyphénolique d'origine végétale connu pour ses activités antioxydantes et ses effets bénéfiques sur la santé. Sa solubilité, sa stabilité, sa biodisponibilité et ses activités biologiques peuvent être améliorées par une acylation sélective de ses groupements hydroxylés. Ce travail vise à étudier la possibilité d'une acétylation enzymatique de la QCT par la lipase B de Candida antarctica (CALB), la lipase la plus exploitée industriellement pour des estérifications régio- et énantiosélectives. Dans une perspective d'ingénierie rationnelle de l'enzyme, une démarche de modélisation moléculaire est mise en oeuvre pour mieux comprendre les interactions qui régissent le positionnement et l'orientation du substrat dans le site actif de la lipase. Dans une première partie expérimentale, l'absence d'activité d'acétylation de la CALB envers la QCT, en présence d'un excès d'acétate de vinyle, a été confirmé. Dans une seconde partie, cette inactivité de la CALB a été expliquée à l'aide de simulations de docking et de dynamique moléculaire. Elle résulte d'une orientation inappropriée du donneur d'acyle liée à la sérine catalytique et d'une proximité insuffisante des hydroxyles de la QCT vis-à-vis des résidus catalytiques. L'éloignement de la QCT de la triade catalytique est due à la rigidité de la molécule, l'étroitesse du site actif ainsi qu'à des interactions hydrophobes et électrostatiques entre le substrat et les résidus de la cavité. En revanche, cette approche de simulation moléculaire prédit un bon positionnement des deux substrats dans le site actif de la lipase de Pseudomonas cepacia (PCL), laquelle est capable d'acétyler la QCT. Dans une troisième partie, l'influence de mutations de deux résidus impliqués dans les liaisons de stabilisation hydrophobe de la QCT dans la CALB a été investiguée par simulation. La substitution d'isoleucines par des valines et des alanines conduit à une augmentation du volume de la poche catalytique et une mobilité accrue de la QCT. Mais ces mutations sont insuffisantes pour permettre un positionnement adéquat de l'acétate et de la QCT par rapport à la triade catalytique. La dernière partie focalise sur les interactions électrostatiques entre la QCT et le site actif de CALB. Les orientations du substrat dans la cavité suite à une méthylation ou une acétylation des groupements hydroxyles de la QCT sont précisées / Quercetin (QCT) is a plant-produced polyphenolic compound well-known for its antioxidant activities and beneficial health effects. Its solubility, stability, bioavailability and biological activities may be improved by a selective acylation of its hydroxyl groups. This work aims at studying the possibility of QCT enzymatic acetylation by Candida antarctica lipase B (CALB), the most industrially exploited lipase for regio- and enantioselective esterifications. In prospect of the rational enzyme design, a molecular modeling approach was implemented to understand the interactions that govern the substrate positioning and orientation in the lipase's active site. In a first experimental part, the absence of CALB acetylation activity towards quercetin in excess of vinyl acetate was confirmed. In a second part, this inactivity of CALB was explained by means of docking and molecular dynamics simulations. This results from an inappropriate positioning of the acyl donor linked to the catalytic serine and from an insufficient proximity of QCT hydroxyls vis-à-vis catalytic residues. The distance of QCT from the catalytic triad is due to its rigidity and to the narrow active site as well as to hydrophobic and electrostatic interactions between the substrate and the cavity residues. On the contrary, this molecular simulation approach predicts an appropriate positioning of both substrates in the active site of Pseudomonas cepacia lipase (PCL), which can perform QCT acetylation. In a third part, the impact of mutations of two residues implicated in the stabilization of QCT by hydrophobic interactions in CALB was investigated through simulations. The substitution of isoleucines by alanines and valines led to an increase in the catalytic pocket volume which intensified the mobility of QCT. However, these mutations are insufficient to allow an appropriate positioning of acetate and QCT in relation to the catalytic triad. The last part of this work focuses on the electrostatic interactions between QCT and CALB's active site. The substrate orientation in the cavity following methylation or acetylation of QCT's hydroxyl groups was clarified

Neste trabalho prepararam-se ésteres de ácidos graxos por esterificação do ácido oléico e transesterificação do óleo de soja e do triéster oléico via catálise enzimática. Determinou-se a composição dos produtos obtidos por RMN 1H e CG-FID. Os padrões dos ésteres do ácido oléico via esterificação ácida foram preparados empregando ácido sulfúrico, os padrões dos ésteres do óleo de soja por transesterificação básica com hidróxido de sódio e o padrão do triéster oléico foi sintetizado utilizando ácido p-tolueno sulfônico como catalisador. A melhor enzima para essas reações foi determinada através de reações de esterificação do ácido oléico e transesterificação do óleo de soja com etanol na ausência de co-solventes, sendo que foi selecionada a lipase de Candida antarctica. A mesma enzima foi empregada nas esterificações enzimáticas do ácido oléico com diversos alcoóis (metanol, etanol, n-propanol e n-butanol), na transesterificação enzimática do óleo de soja e do triéster oléico com etanol. Em ambos os estudos, foram avaliados os fatores que influenciam as reações: quantidade de enzima; tempo de reação; água adicionada ao álcool e reuso do biocatalisador. Na esterificação enzimática do ácido oléico, o uso do etanol forneceu o melhor rendimento (96,5%) com 5,0% (m/m) de enzima em 24 horas de reação. Quando uma quantidade de 4,0% de água foi adicionada ao álcool, a reação utilizando metanol mostrou maior eficiência (98,5%) e os rendimentos com os outros alcoóis não foram alterados significativamente (acima de 90%). Também foi possível utilizar a enzima por até 10 ciclos sem perda de rendimento, com exceção do metanol, onde ocorreu um decréscimo acentuado de rendimentos nos ciclos seguintes. Na transesterificação enzimática do óleo de soja, os mesmos fatores foram avaliados e com 5,0% de enzima, após 24 horas, foi obtido um rendimento de 84,1% e com a adição de água o rendimento não foi significativamente alterado (83%). Na transesterificação, os métodos de quantificação por RMN 1H e CG-FID foram comparados sendo que uma maior diferença foi observada para as reações com baixos rendimentos por RMN 1H, porém em altos rendimentos a diferença entre os dois métodos não foi significativa. Monoglicerídeos e diglicerídeos foram quantificados por CG-FID e por RMN 1H onde foi possível calcular a razão dos produtos formados através de uma equação desenvolvida, sendo que a diferença entre esses tipos de análises foi pequena, de apenas 1,4%. A transesterificação enzimática do triéster oléico foi obtida em bom rendimento (90,4%) e uma pequena quantidade de mono- e diglicerídeos foi produzida. Em todas as reações de transesterificação, o glicerol não foi detectado após a lavagem dos produtos. A metodologia empregando a lipase de Candida antarctica mostrou-se eficiente para a produção de biodiesel a partir do óleo de soja e do ácido oléico com diferentes tipos de alcoóis. / In this work, it was prepared esters of the fatty acid by esterification of the oleic acid and transesterification of the soy oil through enzymatic catalysis. It was determined the composition of the products obtained by 1H NMR and GC-FID. The standards of esters of the oleic acid by acid esterification was prepared employing sulfuric acid, the standards of esters of the soy oil by alkaline transesterification with sodium hydroxide and the standard of the oleic triester was synthesized employing p-toluene sulfonic acid as catalyst. The best enzyme for those reactions was determined through reactions of esterification of the oleic acid and transesterification of the soy oil with ethanol and free co-solvents, and lipase from Candida antarctica was selected. The same enzyme was employed in the enzymatic esterifications of the oleic acid with various alcohols (methanol, ethanol, propanol and butanol), in the enzymatic transesterification of soy oil and the oleic triester with ethanol. In both studies, was assessed the factors that influence the reactions: amount of catalyst, reaction time, water added in the alcohol and the turnover of biocatalyst. In the enzymatic esterification of the oleic acid, the ethanol showed the better yield (96,5%) with 5,0% (m/m) of enzyme at 24 hours of reaction. When 4,0% of water was added to the alcohol, the methanol showed the high efficiency (98,5%) and the yield with another alcohols were not affected. It was also possible to use the enzyme for 10 cycles without lose yield, except for the methanol. In the enzymatic transesterification of the soy oil, the same factors were assessed using 5,0% of enzyme, after 24 hours, a yield of 84,1% was obtained and with the water addition the yield was not modified (83%). On the transesterification, 1H NMR and GC-FID were compared and a great difference was observed for low yields, but on high yields, the difference between methods was small. Monoglycerides and diglycerides were quantified by GC-FID and detected by 1H NMR, it was possible to calculate the ratio between them on the products formed through an equation developed and the difference for this type of analysis was small, only 1.4% . The enzymatic transesterification of the oleic triester was obtained with good yield (90,4%) and a small amount of the monoglycerides and diglycerides was produced. In all the transesterifications reactions, glycerol was not detected after washing mixture of products. The methodology employing Candida antarctica lipase was efficient for biodiesel production by soybean oil and oleic acid with different alcohols.

Les peptides sont des molécules pouvant posséder une activité biologique intéressante (antibiotique, anti-oxydante, antivirale, anti-hypertensive…). Ce sont cependant des molécules difficiles à utiliser car elles possèdent un faible temps de demi-vie in vivo et sont peu bio-disponibles. Le greffage d’un acide gras permet de les protéger et d’accroître leur potentiel d’action. Cette réaction appelée acylation peut être catalysée par des enzymes. A l’heure actuelle, peu de recherches sont faites sur l’acylation de peptides par voie enzymatique et sur la recherche de nouveaux biocatalyseurs adaptés pour cette réaction. Les objectifs de cette thèse ont été, dans un premier temps, de comprendre les mécanismes de la sélectivité d’acylation de peptides de la lipase B de Candida antarctica par une approche de modélisation moléculaire combinant docking et dynamique moléculaire, couplée à une approche expérimentale. Cette étude a permis d’identifier des interactions enzyme-substrats impliquées dans la sélectivité enzymatique et a permis de construire un modèle expliquant la régio- et chimio-sélectivité de l’acylation peptidique catalysée par cette enzyme. Dans un deuxième temps, une étude préliminaire a été menée afin d’identifier de nouvelles enzymes de type acylases présentes dans des surnageants de culture de différentes espèces de Streptomyces. Ces enzymes sont capables de catalyser des réactions d’acylation de peptides en milieux aqueux. Une méthode de semi-purification a été établie et une étude comparative a été menée sur la sélectivité d’acylation de la lipase B de C. antarctica et celle de nouvelles enzymes de type aminoacylases présentes dans un extrait protéique de surnageant de culture de Streptomyces ambofaciens. Ces nouvelles enzymes présentent une spécificité différente de celle de la lipase B de C. antarctica, permettant notamment, une acylation des acides aminés sur leur fonction amine en position α. Une caractérisation partielle des activités amino-acylase du surnageant de culture de S. ambofaciens a été réalisée. Dans une troisième et dernière partie, une comparaison des séquences génétiques a été réalisée entre treptomyces mobaraensis et S. ambofaciens afin d’identifier les gènes codant pour les acylases découvertes chez S. ambofaciens. Des mutants de S. ambofaciens délétés pour ces gènes ont été construits et la fonctionnalité des enzymes codées par ces gènes a été vérifiée ; enfin, une expression hétérologue de l’ε-lysine acylase a été initiée / Peptides exhibit various beneficial effects such as antioxidant, anti-hypertensive, neuroprotective, antiviral or antimicrobial activities. However, their use can be limited by their short half-life and their low biological availability. One solution to overcome these drawbacks is the acylation of peptides with fatty acids. This reaction called acylation can be catalyzed using enzymes. To date, very few studies focus on enzymatic acylation of peptides and on finding new enzymes catalyzing this reaction. The objectives of this work were, in a first time, to understand the selectivity mechanisms of the lipase B of Candida antarctica for peptides acylation combining experimental and molecular modeling approaches. This study highlighted enzyme/substrate interactions involved in the enzymatic selectivity and a modelexplaining the chemo- and regio-selectivity of this enzyme for peptide acylation reactions was built. In a second time, a preliminary study was carried out in order to identify new aminoacylase enzymes produced in the culture supernatant of various species of Streptomyces. These enzymes are able to catalyze acylation of peptides in aqueous media. A partial purification method was set and a comparative study was performed on the selectivity of C. antarctica lipase Band that of the new aminoacylases discovered in the culture supernatant of Streptomyces ambofaciens ATCC 23877. These enzymes presented a selectivity different from C. antarctica lipase B allowing the acylation of the N-terminal amino group of amino acids or peptides. A partial description of the aminoacylase activity of the supernatant crude extract of S. ambofaciens was performed. In a third and final part, a comparison of sequences of aminoacylases from Streptomyces mobaraensis with the genome of S.s ambofaciens ATCC 23877 was performed in order to identify genetic sequences encoding the new discovered aminoacylases from S. ambofaciens ATCC 23877. Each identified gene was deleted to correlate it with the aminoacylase activity observed in the crude extract of S. ambofaciens. Lastly, a heterologous expression of the ε-lysine acylase was initiated

Neste trabalho prepararam-se ésteres de ácidos graxos por esterificação do ácido oléico e transesterificação do óleo de soja e do triéster oléico via catálise enzimática. Determinou-se a composição dos produtos obtidos por RMN 1H e CG-FID. Os padrões dos ésteres do ácido oléico via esterificação ácida foram preparados empregando ácido sulfúrico, os padrões dos ésteres do óleo de soja por transesterificação básica com hidróxido de sódio e o padrão do triéster oléico foi sintetizado utilizando ácido p-tolueno sulfônico como catalisador. A melhor enzima para essas reações foi determinada através de reações de esterificação do ácido oléico e transesterificação do óleo de soja com etanol na ausência de co-solventes, sendo que foi selecionada a lipase de Candida antarctica. A mesma enzima foi empregada nas esterificações enzimáticas do ácido oléico com diversos alcoóis (metanol, etanol, n-propanol e n-butanol), na transesterificação enzimática do óleo de soja e do triéster oléico com etanol. Em ambos os estudos, foram avaliados os fatores que influenciam as reações: quantidade de enzima; tempo de reação; água adicionada ao álcool e reuso do biocatalisador. Na esterificação enzimática do ácido oléico, o uso do etanol forneceu o melhor rendimento (96,5%) com 5,0% (m/m) de enzima em 24 horas de reação. Quando uma quantidade de 4,0% de água foi adicionada ao álcool, a reação utilizando metanol mostrou maior eficiência (98,5%) e os rendimentos com os outros alcoóis não foram alterados significativamente (acima de 90%). Também foi possível utilizar a enzima por até 10 ciclos sem perda de rendimento, com exceção do metanol, onde ocorreu um decréscimo acentuado de rendimentos nos ciclos seguintes. Na transesterificação enzimática do óleo de soja, os mesmos fatores foram avaliados e com 5,0% de enzima, após 24 horas, foi obtido um rendimento de 84,1% e com a adição de água o rendimento não foi significativamente alterado (83%). Na transesterificação, os métodos de quantificação por RMN 1H e CG-FID foram comparados sendo que uma maior diferença foi observada para as reações com baixos rendimentos por RMN 1H, porém em altos rendimentos a diferença entre os dois métodos não foi significativa. Monoglicerídeos e diglicerídeos foram quantificados por CG-FID e por RMN 1H onde foi possível calcular a razão dos produtos formados através de uma equação desenvolvida, sendo que a diferença entre esses tipos de análises foi pequena, de apenas 1,4%. A transesterificação enzimática do triéster oléico foi obtida em bom rendimento (90,4%) e uma pequena quantidade de mono- e diglicerídeos foi produzida. Em todas as reações de transesterificação, o glicerol não foi detectado após a lavagem dos produtos. A metodologia empregando a lipase de Candida antarctica mostrou-se eficiente para a produção de biodiesel a partir do óleo de soja e do ácido oléico com diferentes tipos de alcoóis. / In this work, it was prepared esters of the fatty acid by esterification of the oleic acid and transesterification of the soy oil through enzymatic catalysis. It was determined the composition of the products obtained by 1H NMR and GC-FID. The standards of esters of the oleic acid by acid esterification was prepared employing sulfuric acid, the standards of esters of the soy oil by alkaline transesterification with sodium hydroxide and the standard of the oleic triester was synthesized employing p-toluene sulfonic acid as catalyst. The best enzyme for those reactions was determined through reactions of esterification of the oleic acid and transesterification of the soy oil with ethanol and free co-solvents, and lipase from Candida antarctica was selected. The same enzyme was employed in the enzymatic esterifications of the oleic acid with various alcohols (methanol, ethanol, propanol and butanol), in the enzymatic transesterification of soy oil and the oleic triester with ethanol. In both studies, was assessed the factors that influence the reactions: amount of catalyst, reaction time, water added in the alcohol and the turnover of biocatalyst. In the enzymatic esterification of the oleic acid, the ethanol showed the better yield (96,5%) with 5,0% (m/m) of enzyme at 24 hours of reaction. When 4,0% of water was added to the alcohol, the methanol showed the high efficiency (98,5%) and the yield with another alcohols were not affected. It was also possible to use the enzyme for 10 cycles without lose yield, except for the methanol. In the enzymatic transesterification of the soy oil, the same factors were assessed using 5,0% of enzyme, after 24 hours, a yield of 84,1% was obtained and with the water addition the yield was not modified (83%). On the transesterification, 1H NMR and GC-FID were compared and a great difference was observed for low yields, but on high yields, the difference between methods was small. Monoglycerides and diglycerides were quantified by GC-FID and detected by 1H NMR, it was possible to calculate the ratio between them on the products formed through an equation developed and the difference for this type of analysis was small, only 1.4% . The enzymatic transesterification of the oleic triester was obtained with good yield (90,4%) and a small amount of the monoglycerides and diglycerides was produced. In all the transesterifications reactions, glycerol was not detected after washing mixture of products. The methodology employing Candida antarctica lipase was efficient for biodiesel production by soybean oil and oleic acid with different alcohols.

Since the mid-20th century, global average temperatures have dramatically risen mostly due to the increasing amount of greenhouse gas emissions in the atmosphere. The effects of this recent global warming are already evident and could be exacerbated in the near future if no real action is taken. Recent ice loss in West Antarctica, monitored by satellite measurements and other techniques, gives cause for concern in such a warming world. A major part of this loss has been driven by warm water masses penetrating underneath the ice shelves in this region. This has led to a flow acceleration of the inland outlet glaciers and a greater discharge of ice to the ocean. The actual resulting contribution of West Antarctica to sea-level rise is estimated to be around 0.2 mm per year between 1992 and 2011, i.e. about one third of the ice-sheet contribution (Antarctica and Greenland), and is expected to increase in the near future.<p><p>In this thesis, we first clearly demonstrate that modeling grounding-line (the boundary between grounded and floating ice) migration depends on both the numerical approach and the physical approximation of the ice-sheet model used. Ice-sheet models prescribing the ice flux at the grounding line and using appropriate physical level and numerical approach converge to the same steady-state grounding-line position irrespective of the grid size used. However, the transient behavior of those models is less accurate than other models and leads to an overestimated grounding-line discharge. Therefore, they need to be used with particular attention on short time scales. Furthermore, the non-inclusion of vertical shear stress in those models increases the effective viscosity and gives steady-state grounding-line positions further downstream when compared to full-Stokes models.<p><p>The second major finding of this thesis is the high control of geometry (glacier width and bedrock topography) on Thwaites Glacier, one of the fastest-flowing outlet glaciers in West Antarctica. A flowline finite-difference Shallow-Shelf Approximation (SSA) model is applied to the glacier and shows that ice-flow convergence (through width parameterization) slows down the grounding-line retreat when compared to simulations where the width is constant. A new buttressing parameterization is also tested on the glacier and permits a better understanding of this effect. Finally, the three-dimensional version of the model above is applied to Thwaites Glacier and highlights the strong control of lateral variations in bedrock topography on grounding-line migration./Depuis le milieu du 20e siècle, les températures moyennes globales ont fortement augmenté principalement à cause de l'augmentation des émissions de gaz à effet de serre d'origine humaine. Les effets de ce réchauffement global récent sont déjà détectables et pourraient s'accentuer dans un futur proche si aucune mesure réelle n'est prise. La perte récente de glace en Antarctique de l'Ouest, enregistrée par mesures satellites et d'autres techniques, est préoccupante dans un monde qui se réchauffe. Une grande partie de cette perte de glace est due à la pénétration de masses d'eau chaude sous les plateformes de glace flottante dans cette région. Cela engendre une accélération de l'écoulement des glaciers émissaires et une plus grande décharge de glace vers l'océan. Ainsi, la contribution récente à la hausse du niveau de la mer de l'Antarctique de l'Ouest s'élève à environ 0.2 mm par an entre 1992 et 2011, c'est-à-dire près du tiers de la contribution des calottes glaciaires (Antarctique et Groenland). On estime que cette contribution va continuer à augmenter dans le futur proche.<p>Dans cette thèse, nous démontrons clairement que la modélisation de la migration de la ligne d'ancrage (frontière entre glaces posée et flottante) dépend de l'approche numérique et de l'approximation physique du modèle cryosphérique utilisé. Les modèles cryosphériques qui prescrivent le flux glaciaire à la ligne d'ancrage et qui utilisent un niveau de physique et une approche numérique appropriés convergent vers la même position d'équilibre de la ligne d'ancrage quelle que soit la taille de maille utilisée. Cependant, le comportement transitoire de ces modèles est moins précis que d'autres modèles et mène à une surestimation du flux à la ligne d'ancrage. Dès lors, ces modèles doivent être utilisés avec précaution sur de courtes périodes de temps. De plus, la non inclusion des contraintes verticales de cisaillement dans ces modèles augmente la viscosité effective et donne des positions d'équilibre de la ligne d'ancrage plus en aval en comparaison avec les modèles « full-Stokes ».<p>La seconde découverte majeure de cette thèse est le contrôle important exercé par la géométrie (largeur du glacier et topographie du lit rocheux) sur Thwaites Glacier, l'un des glaciers émissaires les plus rapides en Antarctique de l'Ouest. Un modèle « Shallow-Shelf Approximation » (SSA) résolvant les différences finies le long d'une ligne d'écoulement est appliqué au glacier et montre que la convergence de l'écoulement glaciaire (au travers de la paramétrisation de la largeur) ralentit le retrait de la ligne d'ancrage comparé aux simulations où la largeur est constante. Une nouvelle paramétrisation de l'effet arc-boutant est testée sur le glacier et permet de mieux comprendre cet effet. Finalement, la version en trois dimensions du modèle ci-dessus est appliquée à Thwaites Glacier et met en évidence le contrôle important des variations latérales de l'altitude du lit rocheux sur la migration de la ligne d'ancrage. / Doctorat en Sciences / info:eu-repo/semantics/nonPublished

Antarctic ice shelves control the ice flux from the continent to the ocean. As such, they play a major role in the stability of the ice sheet and its potential contribution to sea level rise, especially in the context of global change. Below some of these ice shelves, marine ice can be found which is a product of the Deep Thermohaline Circulation. Due to its specific genetic process, marine ice has intrinsic physical (grain size, ice fabric, bubble content, ) and chemical (impurities, water stable isotopes) properties, that differ from those of 'meteoric ice' formed on the continent through snow metamorphism or 'sea ice' resulting from sea water freezing at the ocean-atmosphere surface. Until now however, the effect of these specific properties on marine ice rheology is still very poorly understood.<p><p>The principal objective being to include realistic mechanical parameters for marine ice in ice shelf flow models, uniaxial compression experiments have been performed on various types of marine ice samples. Technical developments are an important component of this thesis has they were necessary to equip the laboratory with the appropriate tools (pneumatic rig, automatic ice fabric data handling).<p><p>Results from experimental compression on isotropic marine ice show that it represents the higher boundary for meteoric ice viscosity throughout the whole temperature range, thereby validating Cuffey and Paterson's relationship with an enhancement factor equals to 1.<p><p>Marine ice is however often quite anisotropic, showing elongated crystals and wide single maximum fabric, that should impact its mechanical properties. Experiments on pre-oriented marine ice samples have therefore been carried out combining the study of epsilon_{oct} vs. tau_{oct} with a thorough analysis of microstructural data 'before' and 'after' the experiment. <p><p>Depending on the orientation of the sample in the applied stress field and on the intensity of the latter, anisotropic marine ice can be harder or softer than its isotropic counterpart, with n=4 often observed in Glen's flow law. Associating the experimental geometrical settings to potential natural equivalent, results suggest that anisotropic marine ice would strengthen ice shelf flow in most areas (for a same given temperature), apart from suturing areas between individual ice streams as they merge to form the ice shelf, where it could become weaker than meteoric ice in certain circumstances.<p><p>Finally, preliminary sensitivity studies, using a simple ice shelf model with our experimental parameters of Glen's flow law have allowed us to discuss the potential impact of rift location, rift size and thermal regime in the ice shelf behavior. / Doctorat en Sciences / info:eu-repo/semantics/nonPublished

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The principal aim of this thesis is to undertake a critical examination of the role of the international patent system in the transfer of technology to West Africa, particularly Ghana and Nigeria. It focuses mainly on the patent systans and technology regulatory regimes of the two countries. The study is intended to identify and evaluate the impact of the international patent system on the transfer and development of technology in this area. The first chapter provides a theoretical foundation to some of the more practical issues to be discussed in the subsequent chapters. The Paris Convention and the diplomatic revision exercise thereof, as well as other efforts and policies regarding patents and technology transfer at various levels are discussed in Chapter Two. Chapters Three to Eight consider the two case-studies undertaken in this thesis. Chapter Three begins with the historical development of the patent system in both Ghana and Nigeria, and the remaining chapters continue with a discussion of the present patent and technology regulatory regimes of both countries. Based on facts and figures the two case-studies examine critically the patent law and systems and technology transfer laws of these two countries including other related institutional measures highlighting their strengths and weaknesses. The study argues that if the patent systems of both countries are to play a meaningful role in the transfer and developnent of technology they nust be utilized as a tool of economic policy and also be related to the technology transfer regimes which nust necessarily be integrated into the national technology policy which should, in turn, be made an integral part of the entire national developnent plan. It is concluded that it is only in this way that the patent system can effectively contribute to the transfer of technology and the development of indigenous technological capabilities in the two countries.