Visual system development requires the formation of precise circuitry in the dorsal lateral geniculate nucleus (dLGN) of the thalamus. Although much work has examined the molecular mechanisms by which retinal axons target and form synapses in dLGN, much less is known about the mechanisms that coordinate the formation of non-retinal inputs in dLGN. These non-retinal inputs represent ~90% of the terminals that form in dLGN. Interestingly, recently reports show that the targeting and formation of retinal and non-retinal inputs are temporally orchestrated. dLGN relay neurons are first innervated by retinal axons, and it is only after retinogeniculate synapses form that axons from cortical layer VI neurons are permitted to enter and arborize in dLGN. The molecular mechanisms governing the spatiotemporal regulation of corticogeniculate innervation are unknown. Here we screened for potential cues in the perinatal dLGN that might repel the premature invasion of corticogeniculate axons prior to the establishment of retinogeniculate circuitry. We discovered aggrecan, an inhibitory chondroitin sulfate proteoglycan (CSPG), was highly enriched in the perinatal dLGN, and aggrecan protein levels dropped dramatically at ages corresponding to the entry of corticogeniculate axons into the dLGN. In vitro assays demonstrated that aggrecan is sufficient to repel axons from layer VI cortical neurons, and early degradation of aggrecan, with chondroitinase ABC (chABC), promoted advanced corticogeniculate innervation in vivo. These results support the notion that aggrecan is necessary for preventing premature innervation of the dLGN by corticogeniculate axons. To understand the mechanisms that control aggrecan distribution, we identified a family of extracellular enzymes (the a disintegrin and metalloproteinase with thromobospondin motifs [ADAMTS] family) expressed in postnatal dLGN that are known to contain aggrecan-degrading activity. Importantly, ADAMTS family members are upregulated in dLGN after retinogeniculate synapses form, and intrathalamic injection of ADAMTS4 (also known as aggrecanase-1) resulted in premature invasion of dLGN by corticogeniculate axons. Taken together these results implicate aggrecan and ADAMTSs in the spatial and temporal regulation of non-retinal inputs to the dLGN.

Planar cell polarity (PCP) is a developmental signaling mechanism that establishes a polarity within the plane of an epithelium. PCP has been shown to play a role in guiding numerous neurodevelopmental processes such as convergent extension, neuron migration, and axon pathfinding. Certain commissural neurons in the dorsal spinal cord make a series of guidance decisions en route to the brain: first, a ventral projection along the D-V axis, followed by a midline crossing, and after exiting the floorplate, a dorso-anterior turn along the A-P axis. Here, we provide in vivo evidence that the axons of the Commissural Primary Ascending (CoPAs) neurons in zebrafish require the PCP genes fzd3a, vangl2, and scribble for rostral pathfinding both before and after crossing the midline. Dorsoventral guidance of CoPA axons is unaltered in fzd3a, vangl2, and scribble mutants, suggesting that the PCP signaling pathway only controls A-P guidance of CoPAs. Our results have provided evidence for two potential non- mutually exclusive models: (i) A-P axon guidance is achieved by cell-autonomous Wnt-Frizzled signaling or that (ii) A-P axon guidance is achieved by non-cell-autonomous PCP signaling in the neuroepithelial environment. The single-cell nature of the CoPA axon system allows for simple genetic manipulation and visualization, which will potentially elucidate the validity of either model. Scribble (Scrib), a member of the LAP family, plays a critical role in establishing and regulating cell polarization in epithelia and during cell migration. In zebrafish, Scrib mutants have defects in convergent extension (CE) cell movements and facial branchiomotor neuron (FBMN) migration. Despite our understanding of Scrib’s genetic role in neurodevelopment, little is known about the subcellular localization of endogenous Scrib in vivo during CE and FBMN migration. We have generated a monoclonal antibody against the C-terminus of zebrafish Scrib and have shown that this antibody is specific against endogenous Scrib in both western blot and immunocytochemical applications. Confocal microscopy of Scrib immunocytochemistry shows that at various developmental stages, Scrib distinctly localizes to basolateral membranes of non polarized epithelium, to the membrane in mesodermal cells undergoing CE, and to the membrane of migrating FBMNs. Furthermore, the distribution of Scrib puncta along membranes of FBMN- FBMN contact is significantly altered in the PCP mutant pk1b. Further application of our newly generated Scrib antibody will potentially lead to new insight on Scrib’s role in neurodevelopment.

An epidemiological shift towards the elderly population has occurred in traumatic brain injury (TBI). Age is believed to be one of the strongest prognostic indicators following TBI. Diffuse axonal injury (DAI), a prevalent feature of TBI, is believed to be the primary cause for much of the morbidity and mortality associated with TBI. The pathobiology associated with DAI is believed to occur in response to the primary injury in a progressive, secondary fashion. Though the injury mechanisms behind DAI have been shown to occur at numerous sites along the axon, recent work suggests that the axon initial segment (AIS) may show specific vulnerability to DAI and be the primary site of axonal pathobiogenesis. Despite its established predilection for injury, the mechanisms responsible for the pathobiology remain largely unclear – particularly with regard to the age. The current study aims to shed light on the mechanisms responsible for injury by investigating structural alterations to the AIS following DAI in young and old mice. To address this question we have used a central fluid percussion injury (cFPI) model to induce mild DAI on 22-month old aged mice and 3-month old young mice at 3-hours and 24-hours survival time. Double-labeling fluorescent immunohistochemistry was used to demonstrate colocalization of ankG, an AIS domain marker, and APP, a marker used to establish traumatic axonal injury (TAI). Qualitative-quantitative observations based on confocal microscopy demonstrated an increase in APP accumulation associated with AIS over time, post-injury. Initial segments displaying APP association consistently showed a significant overall shortening in young and aged groups at both survival times. No significant difference in AIS length was detected between AIS populations of young and aged mice. Qualitative findings, however, suggest that AIS degradation could be more profound with age, which could have implications on neuronal outcome.

Traumatic axonal injury (TAI) is a consistent feature of (TBI) and is responsible for much of its associated morbidity. TAI is now recognized to result from progressive/secondary axonal injury, though much remains unknown in regards to the pathobiology and the long-term consequences of axonal injury. TAI has been described in the perisomatic domain, located within the neocortex following mild TBI, and within this domain has been linked to neuronal recovery, not neuronal cell death in the acute setting. Due to technical limitations, our understanding of the long-term fate of this neuronal population and the mechanisms responsible for permitting neuronal survival, recovery and axon regeneration following injury are unknown. The studies presented in this thesis are centered upon the hypothesis that injury within the perisomatic domain is unique, and may allow for enhanced neuronal recovery and axonal regeneration. To address many of these questions, we have utilized a novel model of diffuse brain injury in mice, allowing for the use of transgenic mice to overcome previous limitations in the study of TAI. To address this hypothesis, we first assessed the impact of genetic deletion of cyclophilin D (CypD), a regulator of the mitochondrial permeability transition pore (mPTP), upon TAI within the perisomatic domain. Via this approach it was determined that CypD deletion reduced the number of injured axons by ~50%, indicating that CypD and mPTP formation contribute to TAI in the perisomatic domain. Next, using a fluorescent-based approach, we assessed the temporospatial events associated with TAI, acutely. Here it was determined that the axon initial segment (AIS) is uniquely susceptible to TAI following mild TBI (mTBI) and injury within this domain progresses rapidly to axon disconnection. Last we assessed the long-term fate of axotomized neurons and their associated axonal processes. We report that over a chronic time frame, TAI induces no overt cell death, instead results in significant neuronal atrophy with the simultaneous activation of a somatic program of axon regeneration and recovery of the remaining axonal processes. Taken together, the findings of this work reveal that TAI results in a unique axonal injury that results in a persistent axon regenerative attempt.

Multiple sclerosis (MS) is an autoimmune disease of the central nervous system characterized by inflammation and demyelination. In addition to these hallmark features, MS also presents with axonal pathology, which is likely responsible for the signs and symptoms of the disease. Although prominent in MS, axonal pathology is frequently considered a consequence of demyelination and not a primary event. This conclusion is consistent with demyelination inducing the loss of specific axonal domains, known as the nodes of Ranvier that are responsible for the propagation of action potentials along the axon. In contrast, we propose that axonal pathology associated with MS is a primary pathological event, independent of demyelination, and not a product of it. In support of our hypothesis, we have analyzed a different axonal domain known as the axon initial segment. Whereas a single axon has numerous nodes of Ranvier uniformly distributed along the axon, each axon contains only a single axon initial segment that is positioned immediately distal to the neuronal cell body. The axon initial segment is responsible for action potential generation and modulation, and hence is essential for normal neuronal function. Background studies conducted by our lab, employing a murine model of demyelination/remyelination, revealed no correlation between axon initial segment stability and myelin integrity. Here we investigate the fate of the axon initial segment in human multiple sclerosis. While not statistically significant, we provide data demonstrating an apparent 40% reduction in AIS numbers in MS. We further provide qualitative evidence that AIS integrity in MS is not dependent on myelination suggestive that axonal pathology may be a primary event in MS, independent of demyelination. Our current findings are intriguing, but unfortunately this study is underpowered, and more samples will be required to determine whether this apparent reduction is statistically significant.

In zebrafish, CoPA (Commissural Primary Ascending) is the first among ascending commissural axons to pathfind anteriorly and form the spinal commissure. One pathway that guides their anterior growth is the planar cell polarity (PCP) signaling pathway, but it is not fully known how PCP signaling regulates anterior guidance. We examined CoPA pathfinding in various PCP mutants to determine if anterior-posterior (A-P) guidance of CoPAs is dependent on PCP signaling. We found that certain PCP mutants exhibited anterior pathfinding defects, with approximately half of all affected CoPAs migrating incorrectly posteriorly. By using a translation-blocking DCC (Deleted in Colorectal Cancer) morpholino to prevent CoPA midline crossing, we discovered that CoPA axons in Fzd3a and Scribble mutants show severe defects in A-P guidance, which suggest that PCP influences A-P guidance of CoPAs prior to and after midline crossing.

Le système nerveux et le système vasculaire montrent de grandes similitudes notamment au niveau anatomique. Il est maintenant communément admis que des membres des quatre grandes familles de molécules de guidage axonal Sémaphorines, Ephrines, Nétrines et Slits et leurs récepteurs sont également impliqué dans la mise en place du réseau vasculaire, mais la situation inverse n'était pas aussi claire lorsque j'ai débuté ma thèse. Cette thèse s'intéresse au rôle chez la souris de deux molécules de mise en place du système vasculaire VEGFR2 et Synectine dans le contexte du guidage axonal. Nous avons ainsi montré que ces deux molécules sont importantes pour le guidage de différentes populations d'axones par la molécule de guidage axonal Sémaphorine 3E (Séma3E). Dans une première étude, nous avons montré que VEGFR2 est important pour la mise en place du faisceau subiculo-mamillaire in vivo indépendamment de son ligand vasculaire habituel VEGF. En effet, dans ces neurones VEGFR2 agit au sein d'un complexe récepteur à Séma3E, composé de PlexinD1, Neuropilin1, et VEGFR2. Ainsi, la liaison de Séma3E au complexe récepteur entraine l'activation de VEGFR2 qui transduit alors une signalisation promotrice de croissance axonale en activant la voie PI3K/Akt. Dans une seconde étude, nous avons montré que Synectine est important in vivo pour la mise en place de la commissure antérieure, un autre faisceau axonal exprimant le récepteur à Séma3E, PlexinD1. De plus, nous avons montré in vitro que Synectine est nécessaire à la réponse inhibitrice de croissance induite par Séma3E dans les neurones du cortex latéral piriforme qui correspondent aux neurones projetant dans la commissure antérieure. En impliquant Synectine et VEGFR2 dans le guidage axonal, les résultats présentés dans cette thèse mettent donc en avant que si le système vasculaire utilise des molécules du système nerveux pour son développement, le système nerveux peut également utiliser des molécules du système vasculaire pour la mise en place de son réseau neuronal. / Important similarities exist between the vascular and the nervous systems, both at anatomical and molecular levels. There is now clear evidence that members of all four classical families of axon guidance molecules (Ephrins, Netrins, Slits, and Semaphorins) and their cognate receptors are implicated in vascular patterning. Here we present evidence for the reverse situation in wich two vascular molecules, VEGFR2 and Synectin, are implicated in axon patterning of two major axon tract in vivo, and in their response to the axon guidance molecule Semaphorin 3E in vitro.

Les récentes avancées dans notre compréhension de la tumorigenèse pancréatique ont montré que la présence d'un compartiment cellulaire non tumoral : le « stroma » ou « microenvironnement intra-tumoral », avait une incidence directe sur la progression de la maladie. Le but de ce travail était de déterminer le rôle du stroma dans la progression de l'adénocarcinome pancréatique. Pour cela, nous avons étudié le profil d'expression génique spécifique du stroma. Ceci nous a permis de mettre en évidence des gènes impliqués dans la régulation du système nerveux, dénommés « facteurs neurogéniques », pouvant être reliés aux phénomènes de remodelage neural observés dans les adénocarcinomes pancréatiques. Ceux-ci sont associés aux douleurs caractéristiques du cancer du pancréas, aux récidives locales, à l'extension locorégionale. Nous avons alors approfondi notre étude sur l'axe SLIT2/ROBO. Nos résultats montrent qu'au travers la sécrétion de Slit2, le stroma a un impact direct sur le remodelage neural. Ces données peuvent permettre d'ouvrir une nouvelle voie thérapeutique dans le cancer du pancréas, ayant pour but de cibler les conséquences du remodelage neural. / Recent progress in our understanding of pancreatic tumorigenesis had shed light on the non tumoral cell compartment of the tumor, so-called "stroma" or "intra-tumoral microenvironment", in the spread of the disease. The goal of our work was to decipher the role of stroma in the spread of this disease. We could analyze the specific gene expression profile of stroma, leading to the discovery of several genes plausibly linked to neural remodeling, called "neurogenic factors". This neural remodeling is clinically correlated with neuropathic pain and locoregional spread. We have next deepened our analysis on the axis SLIT2/ROBO. We could demonstrate that stromal compartment is able to impact on neural remodeling, through secretion of Slit2. These results provide rationale to investigate the disruption of stromal/neural compartment connexion with Slit2/ROBO inhibitors for treatment of pancreatic cancer reccurrence and pain.

La maladie d’Alzheimer, de nombreux syndromes parkinsoniens, certaines démences fronto-temporales telle que la maladie de Pick sont des exemples de maladies neurodégénératives appelées « tauopathies » qui sont caractérisées par la présence d’agrégats intracellulaires de protéines Tau dans le cerveau des sujets atteints. La formation de tels agrégats résulterait de l’altération des propriétés et fonctions normales des protéines Tau à réguler et structurer les réseaux de microtubules au sein des axones ; ce qui se traduit par une perte progressive de la masse des microtubules dans les axones, la désorganisation du transport axonal et au final la mort cellulaire. La compréhension des tauopathies passe donc par celle :- de la dynamique des microtubules qui est régie par les mécanismes de l’instabilité dynamique au cours desquels les microtubules alternent en permanence entre une phase de croissance (polymérisation des GTP-tubulines) et de rétrécissement (dissociation des GDP-tubulines);- et des interactions entre protéines Tau – microtubule qui jouent un rôle important dans la polymérisation, la stabilisation des microtubules et l’organisation spatiale du réseau de microtubules dans l’axone.L'objectif de ce travail de thèse est de construire et de consolider les bases qui permettront d'aller vers une modélisation fine de l'interaction des microtubules dynamiques avec une population de protéines Tau. Pour y parvenir, deux problèmes ont été abordés : (i) la dynamique intrinsèque des microtubules, c'est-à-dire en l'absence de protéines Tau et (ii) l'interaction Tau-Microtubule pour des microtubules stabilisés, c'est-à-dire non-dynamiques.Afin d’aborder ces problèmes, le travail de cette thèse a été mené selon deux approches :-Théorique : développements de modèles mathématiques décrivant les différents processus-Simulations numériques : développement de programmes Monte-Carlo (sous Matlab)Les résultats principaux ont été organisés et structurés en deux grandes parties :Développement d’un modèle mésoscopique décrivant l’instabilité dynamique des microtubules à l’échelle de la tubuline (unité fondamentale du microtubule). Ce modèle décrit une instabilité dynamique des microtubules non-Markoviènne dont les caractéristiques sont comparables aux observations expérimentales.2) Développement d’un modèle décrivant la dynamique de décoration d’un microtubule stabilisé (absence d’instabilité dynamique) par une population de protéines Tau. Les caractéristiques de ce modèle sont basées, pour la construction, et comparables aux expériences de cosedimentation et de microscopie électronique. / Alzheimer’s disease, some frontotemporal dementias such as the Pick’s disease are examples of neurodegenerative diseases called "Tauopathies" which are characterized by the presence of intracellular aggregates of Tau-proteins in the brain of patients. The formation of such aggregates would result from the loss of the normal functions of the Tau-proteins to properly organize the microtubule network within the axon ; which leads to a progressive loss of microtubule’s mass within the axons, the disorganization of the axonal transport and at the end, the cell death. To understand the Tauopathies, we have to understand :- the dynamic of microtubules which is controlled by the mechanisms of the dynamic instability in which microtubules switch between a phase of growth (polymerization of GTP) and a phase of shrinkage (dissociation of GDP)- the interaction between Tau-proteins and microtubules which play an important role in the polymerization, stabilization and spatial organization of microtubules within the axonal network.The objective of this work is to build and consolidate the blocks in order to go to precise modeling of the interaction of microtubules with a dynamic population of Tau-proteins. To this purpose, two problems were considered : (i) the intrinsic dynamic of microtubules (i.e., in absence of Tau-proteins) and (ii) the interaction between Tau-proteins and a stabilized-microtubules (i.e., in absence of dynamic instability)In order to this, the work has been done according to two approaches :- Theoretical : development of mathematical models describing the different process.- Simulation : development of Monte-Carlo programs (under Matlab)The main results have been organized in two main parts :1) Development of a mesoscopic model describing the dynamic instability of microtubules at the scale of the tubulin. This model describes the non-Markovian dynamic of microtubules and the characteristics are compatible with the experimental observations.2) Development of a model describing the dynamical decoration of a microtubule by a population of Tau-proteins. The characteristics of the model are based, for the construction, and compatible with the experimental observations.

In previous studies, some channels, called the “sleeper channels,” were reported to contribute to the shaping of the action potential (AP) only under non-physiological conditions. These channels have been hypothesized to play a role in providing a protective mechanism to prevent damage from neuronal hyperexcitation. Here we applied two-electrode current clamp at the primary branch point (1°BP) and the presynaptic terminal simultaneously on crayfish axons. Cadmium had minimal effects on AP shaping, suggesting the absence of calcium-activated potassium channels. Application of 1 mM TEA had minimal impact on AP waveform. In the presence of 4-Aminopyridine (4-AP), the same tetraethylammonium (TEA) concentration significantly prolonged AP duration, resembling the behaviors of sleeper channels. The kinetics of the TEA-sensitive channel (Kv(TEA)) is similar to the Kv2 family of mammalian K+ channels. TEA depolarized the potential after an AP and increased the AP duration in a dose-dependent manner, indicating that these channels contributed to maintaining AP waveform majorly during the hyperpolarization. The terminals were more sensitive to the blockers, suggesting a probability of regulation on neurotransmitter release. However, the TEA-sensitive channels at the crayfish axon had a higher affinity to TEA than the Kv2 channels. Pharmacological profiles, spatial distinction and function of the Kv(TEA) in the crayfish axon require further study.