Experiments with both quantitative and qualitative factors always complicate the selections of experimental settings and the statistical analysis for data. Response surface methodology (RSM) provides the systematic procedures such as the steepest ascent method to develop and improve the response models through the optimal settings of quantitative factors. However the sequential method lacks of exploring the direction of the maximum increase in the response among the qualitative levels. In this dissertation the optimal designs for experiments with both qualitative and quantitative factors are investigated. Focused on the second-order response surface model for quantitative factors, which is widely used in RSM as a good approximation for the true response surface, the approximate and exact D-optimal designs are proposed for the model containing the qualitative effects. On spherical design regions, the D-optimal designs have particular structures for considering the qualitative effects to be fixed or random. In this study, the exact D-optimal designs for a second-order response surface model on a circular design region with qualitative factors are proposed. For this model, the interactions between the quantitative and qualitative factors are assumed to be negligible. Based on this design region, an exact D-optimal design with regular polygon structure is made up according to the remainder terms of the numbers of experimental trials at each qualitative levels divided by 6. The complete proofs of exact D-optimality for models including two quantitative factors and one 2-level qualitative factor are presented as well as those for a model with only quantitative factors. When the qualitative factor has more than 2 levels, a method is proposed for constructing exact designs based on the polygonal structure with high efficiency. Furthermore, a procedure for minimizing the number of support points for the quantitative factors of exact D-optimal designs is also proposed for practical consideration. There are no more than 13 support points for the quantitative factors at an individual qualitative level. When the effects between the quantitative and qualitative factors are taken into consideration, approximate D-optimal designs are investigated for models in which the qualitative effects interact with, respectively, the linear quantitative effects, or the linear effects and 2-factor interactions of the quantitative factors or quadratic effects of the quantitative factors. It is shown that, at each qualitative level, the corresponding D-optimal design consists of three portions as a central composite design but with different weights on the cube portion, star portion and center points. Central composite design (CCD) is widely applied in many fields to construct a second-order response surface model with quantitative factors to help to increase the precision of the estimated model. A chemical study is illustrated to show that the effects of the qualitative factor interacts with 2-factor interactions of the quantitative factors are important but absent in a second-order model including a qualitative factor treated as a coded variable. The verification of the D-optimality for exact designs has become more and more intricate when the qualitative levels or the number of quantitative factors increase, even when the patterns of the exact optimal designs have been speculated. The efficient rounding method proposed by Pukelsheim and Rieder (1992) is a model-free approach and it generates an exact design by apportioning the number of trials on the same support points of a given design. For constructing the exact designs with high efficiencies, a modified efficient rounding method is proposed and is based on the polygonal structure of the approximate D-optimal design on a circular design region. This modification is still based on the same rounding approach by apportioning the number of trials to the concentric circles where the support points of the given design are standing on. Then a regular polygon design will be assigned on the circles by the apportionments. For illustration, the exact designs for a third-order response surface model with qualitative factors are presented as well as those for the second-order model. The results show that nearly D-optimal designs are obtained by the modified procedure and the improvement in D-efficiency is very significant. When the factors with the levels selected randomly from a population, they are treated as with random effects. Especially for the qualitative effects caused by the experimental units that the experimenter is not interested in, one should consider the model with random block effects. In this model, the observations on the same unit are assumed to be correlated and they are uncorrelated between different units. Then the mean response surface is still considered as second-order for quantitative factors but the covariance matrix of the observations is different from the identity matrix. In the fourth part of this dissertation, the locally D-optimal designs on a circular design region are proposed for given the value of the correlations. These optimal designs with the structures based on the regular polygons are similar to the D-optimal designs for the uncorrelated model.

Sulfur amino acids have critical function as intracellular redox buffers and maintain homeostasis in the external milieu by combating oxidative stress. Synthesis of glutathione (GSH) is regulated at a substrate level by cysteine, which is synthesized by homocysteine via the transsulfuration pathway. Oxidative stress and diminished glutathione pools play a sustained role in the pathogenesis of acute pancreatitis. One of the aims of this study was to experimentally address the temporal relationship between plasma sulfur amino acid levels in patients suffering from acute pancreatitis. The data indicated low concentration of cysteine initially, at levels similar to those of healthy controls. Glutathione was found reduced whilst cysteinyl-glycine and γ- glutamyl transpeptidase activity were increased in both mild and severe attacks. As the disease progressed, glutathione and cysteinyl-glycine were further increased in mild attacks and cysteine levels correlated with homocysteine and γ-glutamyl transpeptidase activity. The progress of severe attacks was associated with glutathione depletion, reduced γ-glutamyl transpeptidase activity and increased cysteinyl-glycine, that correlated with glutathione depletion. The corollary that ample supply of cysteine and cysteinly-glycine does not contribute towards glutathione synthesis in acute pancreatitis poses an important issue that merits resolution. Heightened oxidative stress and depletion of glutathione rationalized the progression of disease in severe attacks. An upsurge that reactive oxygen species can shift redox state of cells is determined by the ratio of the abundant redox couples reduced and oxidized glutathione (GSH: GSSG) in cell. The study reported a novel methodology for quantification of total oxidized glutathione (tGSSG) and total glutathione (tGSH) in whole blood using reverse phase high performance liquid chromatography. The novelty of the method is ascertained by the use of a mercaptan scavenger 1, methyl-2-vinyl-pyridinium trifluromethanesulfonate for the total oxidized glutathione determination. The results reported permit quantitation of tGSSG and tGSH and was applied to a control group. Finally, the study was also focussed in developing a liquid chromatography-mass spectrometric method to evaluate free and conjugated bile acids in patients suffering from various degrees of cholestatic-hepatobiliary disorders. The study reported low levels of ursodeoxycholic acid (UDCA) and slightly high levels of lithocholic acid (LCA). All the primary bile acids seem to be conjugated with glycine and taurine amino acid.

Η ηπατική εγκεφαλοπάθεια είναι ένα πολύπλοκο νευροψυχιατρικό σύνδρομο που έχει συσχετισθεί με οξείες και χρόνιες ηπατοπάθειες. Τα τελευταία χρόνια συσσωρεύονται πληροφορίες που εμπλέκουν το οξειδωτικό στρες (φορτίο) ως παράγοντα-κλειδί στην παθογένεση της ηπατικής εγκεφαλοπάθειας σε μελέτες που χρησιμοποιούν ως μετρούμενους δείκτες την υπεροξείδωση λιπιδίων και το οξειδοαναγωγικό ζεύγος της γλουταθειόνης (GSH/GSSG). Στην παρούσα μελέτη χρησιμοποιήθηκε ένα μοντέλο πειραματικού αποφρακτικού ίκτερου με απολίνωση του χοληδόχου πόρου. Αρσενικοί αρουραίοι χωρίστηκαν σε ομάδες ελέγχου, ψευδώς χειρουργημένων, και σε ομάδες απολίνωσης χοληδόχου πόρου που είτε θυσιάστηκαν την 5η ημέρα, είτε τη 10η ημέρα, ή τους χορηγήθηκαν αντιοξειδωτικοί παράγοντες (NAC, ALP, Vit-E). Στη συνέχεια, μελετήθηκε η θειολική οξειδοαναγωγική κατάσταση στον εγκέφαλο των αρουραίων, και μάλιστα ανά περιοχές (εγκεφαλικός φλοιός, στέλεχος, παρεγκεφαλίδα), καθώς και η επίδραση των επιλεγμένων αντιοξειδωτικών παραγόντων σε αυτήν. Χρησιμοποιήθηκε για πρώτη φορά μια πιο αντιπροσωπευτική εκτίμηση του οξειδωτικού στρες, καθώς ποσοτικοποιήθηκαν συγκεκριμένοι δείκτες υψηλού (GSSG, NPSSR, NPSSC, PSSR, PSSC, PSSP, υπεροξείδια λιπιδίων) και χαμηλού (GSH, CSH, PSH) οξειδωτικού στρες. Τα αποτελέσματά μας δείχνουν αύξηση των πρώτων και μείωση των τελευταίων σε όλες τις εγκεφαλικές περιοχές καταδεικνύοντας έτσι την παρουσία αυξημένου οξειδωτικού φορτίου στον αποφρακτικό ίκτερο. Το σημαντικότερο αποτέλεσμα αυτής της μελέτης είναι ότι κατέδειξε πρώιμα σημεία οξειδωτικού στρες στον εγκέφαλο ήδη από την 5η ημέρα μετά την απολίνωση του χοληδόχου πόρου. Οι μεταβολές των βιοχημικών δεικτών, και αυτό αφορά σε όλους τους δείκτες και σε όλες τις εγκεφαλικές περιοχές, αρχίζουν να φαίνονται από την 5η ημέρα και γίνονται στατιστικά σημαντικές τη 10η ημέρα από την απολίνωση του χοληδόχου πόρου. Διαπιστώσαμε επιπλέον ότι η GSH είχε περίπου διπλάσιες τιμές στον εγκεφαλικό φλοιό από ό, τι στο στέλεχος και την παρεγκεφαλίδα, και ότι στο στέλεχος παρατηρήθηκε μια δραματική αύξηση των επιπέδων των NPSSR τη 10η ημέρα μετά την απολίνωση του χοληδόχου πόρου, τα οποία όμως παρέμειναν χαμηλά στις άλλες δύο περιοχές. Καθώς είναι γνωστό πως το οξειδωτικό στρες έχει ενοχοποιηθεί στην παθογένεση διαφόρων νευροεκφυλιστικών παθήσεων στον άνθρωπο, τα ευρήματα αυτά θα μπορούσαν να συσχετισθούν με διαφορές στη φυσιολογία και τη βιοχημεία των περιοχών αυτών και ενδεχομένως να σχετίζονται με τον τρόπο που το οξειδωτικό στρες εκφράζεται στην παθοφυσιολογία και άλλων νοσολογικών καταστάσεων όπως η πλάγια αμυοτροφική σκλήρυνση, η νόσος Parkinson, και η νόσος Alzheimer. Έχει ενδιαφέρον το γεγονός ότι τα βασικά γάγγλια και οι πυρήνες του στελέχους είναι θέσεις εκλεκτικής βλάβης στην εγκεφαλοπάθεια από χολερυθρίνη στο νεογνικό ίκτερο. Στη δεύτερη πειραματική φάση, στους ικτερικούς αρουραίους χορηγήσαμε αντιοξειδωτικούς παράγοντες, που έχουν επανειλημμένα μελετηθεί τόσο in vitro όσο και σε ζωικά μοντέλα, σε μια προσπάθεια να αναστρέψουμε τις διαταραχές που είχαν παρατηρηθεί. Ένα πρώτο εύρημα ήταν η ευεργετική δράση στην υπεροξείδωση των λιπιδίων, που ποσοτικοποιήθηκε με τον υπολογισμό της MDA, στις ομάδες και των τριών αντιοξειδωτών αλλά κυρίως στις ALP και Vit-E. Και στις τρεις ομάδες που έλαβαν αντιοξειδωτικά, αντίθετα με την ομάδα απολίνωσης χοληδόχου πόρου, δεν παρατηρήθηκε εξάντληση του συνολικού κυτταρικού περιεχόμενου γλουταθειόνης. Επιπλέον, και στις τρεις ομάδες αντιοξειδωτικών δεν παρατηρήθηκε αύξηση των NPSSR στο εγκεφαλικό στέλεχος, γεγονός που υποδηλώνει ότι η συσσώρευση των μη-πρωτεϊνικών δισουλφιδίων στο στέλεχος εμποδίστηκε από τους αντιοξειδωτικούς παράγοντες. Η ανισορροπία των πρωτεϊνικών θειολών, όπως αυτή φάνηκε από τη μείωση της PSH και την αύξηση του PSSP, αναστράφηκε σημαντικά μόνο στην ομάδα NAC στην οποία η PSH αυξήθηκε στα φυσιολογικά επίπεδα. Εν συντομία, η παρούσα μελέτη είναι η πρώτη που καταδεικνύει με σαφήνεια το οξειδωτικό στρες στον εγκέφαλο στο μοντέλο του αποφρακτικού ίκτερου και μάλιστα αρκετά πρώιμα. Χρησιμοποιεί μια συστοιχία βιοχημικών δεικτών που περιγράφουν την θειολική αναγωγική κατάσταση και την υπεροξείδωση των λιπιδίων και μελετά τις ευεργετικές επιδράσεις γνωστών αντιοξειδωτικών παραγόντων στον πειραματικό αποφρακτικό ίκτερο. Τα αποτελέσματά της θα μπορούσαν να προσφέρουν κάποια βοήθεια στην κατανόηση ορισμένων μηχανισμών της ηπατικής εγκεφαλοπάθειας στους ανθρώπους. Μελλοντικές έρευνες θα απαντήσουν ερωτήματα σχετικά με τα γενεσιουργά αίτια του οξειδωτικού στρες, την ίδια την παρουσία των ελευθέρων ριζών και την παθοφυσιολογία του φαινομένου. / Hepatic encephalopathy is a complex neuropsychiatric syndrome that has been associated with acute and chronic liver diseases. Accumulated evidence over the last several years has implicated oxidative stress a key factor in the pathogenesis of hepatic encephalopathy. These studies utilize measurements of lipid peroxidation products and glutathione (GSH) and its oxidized disulfide GSSG. A model of experimental obstructive jaundice after ligation of the biliary duct has been used in the present study. Male Wistar rats were divided into control, sham operated and bile duct ligated groups that were sacrificed either on the 5th or the 10th day, or they have been treated with antioxidant agents (NAC, ALP, Vit-E). Subsequently, the thiol redox state of various areas (cortex, midbrain and cerebellum) of the rat brain and the effect of selected antioxidants were studied. For the first time specific markers of high oxidative stress (GSSG, NPSSR, NPSSC, PSSR, PSSC, PSSP, lipid peroxides) and low oxidative stress (GSH, CSH, PSH) were quantified providing a more detailed assessment of the phenomenon. Our results show increase in the first and decrease in the latter group of markers in all studied brain areas, therefore demonstrating high oxidative stress in the obstructive jaundice. The major impact of the present study is the demonstration of early signs of oxidative stress in the brain. Using this battery of biochemical markers, deviations from control and sham animals occurred as early as 5 days following bile duct ligation; by the 10th day the majority of these changes became statistically significant. It was also observed that GSH values in cerebral cortex were twice as high as those in midbrain and cerebellum and a dramatic increase in the levels of NPSSR on the 10th day after bile duct ligation in midbrain that was not observed in the other brain areas. These findings could be attributed to specificities of metabolic or biochemical status of neurons and astrocytes and alterations of blood-brain barrier permeability in different brain areas and probably should be taken into account in further studies, since, as we know, oxidative stress has been implicated in the pathogenesis of many human diseases like Parkinson’s , Alzheimer’s and Amyotrophic Lateral Sclerosis (ALS). It is of interest that basal ganglia and brainstem nuclei are, as well, the sites of selective damage in bilirubin encephalopathy in jaundiced neonates. Jaundiced rats were treated with agents that have frequently been used in vitro and in vivo for their antioxidant effects, in an effort to reverse the observed alterations in redox state. In the treated groups, there was no decrease in the total cell glutathione content unlike the bile duct ligated rats. There was also no significant difference in the levels of lipid peroxidation as compared with control and sham groups. The imbalance of protein thiols demonstrated by the decrease of PSH and the increase of PSSP was considerably reversed only in the NAC group. In all treated groups, no NPSSR increase was found suggesting that the antioxidant agents suppressed the accumulation of non-protein disulfides in the midbrain. In brief, this experimental study demonstrates the oxidative profile of the brain associated with obstructive jaundice at an early and later stage. A battery of biochemical markers that define the thiol redox state is utilized and the beneficial effects of known antioxidants are examined. The evidence presented supports the concept that oxidative stress is neither a uniform matter affecting brain in a general way nor that any antioxidant agent could prevent damage by enhancing equally well different defence system. It is also likely that oxidative stress is one of the important mechanisms of jaundice-induced encephalopathy. Further studies could provide with more evidence on the pathogenetic mechanisms and generative causes of the oxidative stress in obstructive jaundice.

Les polymères amphiphiles sont largement utilisés pour les applications biomédicales et pharmaceutiques. Afin d’améliorer les chances de biocompatibilité des nouveaux polymères que nous voulons développer, nous avons utilisé des composés naturels, les acides biliaires, comme produits de départ dans la synthèse de ces polymères. De nouveaux polymères anioniques amphiphiles dérivés de l’acide cholique ont été préparés par polymérisation radicalaire par transfert d’atomes. Par un contrôle rigoureux des conditions de polymérisation, des bras de poly(acide acrylique) de différentes longueurs ont été greffés sur le squelette de l’acide cholique. L’architecture moléculaire des polymères a été étudiée par spectroscopie 1H RMN et par spectrométrie de masse. Ces polymères en étoile formés par l’acide biliaire modifié sont capables de s’agréger dans l’eau même si les groupements hydroxyles ont été remplacés par des segments plus volumineux. Il a été observé que les liaisons ester entre le polymère et le cœur d’acide cholique sont sensibles à l’hydrolyse en solution aqueuse. Pour remédier au problème de stabilité en solution aqueuse et pour avoir, en même temps, des bras hydrophiles non ioniques et biocompatibles, de l’oxyde d’éthylène a été polymérisé sur l’acide cholique par polymérisation anionique. Les liaisons éther formées entre le polymère et les groupements hydroxyles de l’acide biliaire sont plus stables que les liaisons ester sur le polymère de poly(acide acrylique). Les conditions de réaction de la polymérisation anionique ont été optimisées et ont donné des polymères aux architectures et aux masses molaires contrôlées. Les nouveaux polymères forment des agrégats sphériques tel qu’observé par microscopie électronique à transmission avec des échantillons préparés par la méthode de fracture à froid. Leur morphologie est différente de celle des agrégats cylindriques formés par les acides biliaires. Avec la méthode optimisée pour la polymérisation anionique, l’éther d’allyle et glycidyle a été polymérisé sur un dérivé d’acide cholique, suivi par une thiolation des liaisons doubles pour introduire l’amine ou l’acide sur la chaîne polymère. Cette addition radicalaire est efficace à plus de 90%. Les polymères qui en résultent sont solubles dans l’eau et s’agrègent à une certaine concentration critique. Il est particulièrement intéressant d’observer la thermosensibilité des polymères ayant des groupements amine, laquelle peut être modulée en acétylant partiellement les amines, donnant des points nuages entre 15 et 48°C. / Amphiphilic polymers are very useful in biomedical and pharmaceutical applications. To improve the biocompatibility of such polymers, we chose to use natural compounds such as bile acids as the starting material in the synthesis of the polymers. New anionic polymers have been prepared by atom transfer radical polymerization. Poly(acrylic acid) arms of various lengths have been grafted onto a bile acid core. The molecular architecture has been confirmed by 1H NMR spectroscopy and by mass spectrometry. The star polymers obtained from modified bile acid can aggregate in water, even though the hydroxyl groups were replaced by bulkier chains. The ester linkages between the polymers and the bile acid core are prone to hydrolysis in aqueous solutions. In order to improve the stability of the polymers in aqueous solutions and to introduce neutral and biocompatible hydrophilic arms, ethylene oxide has been polymerized onto a cholic acid core by anionic polymerization. The ether linkages formed between the hydroxyl groups of the bile acid and the poly(ethylene glycol) are more stable than the ester linkages formed with the poly(acrylic acid) polymers. The reaction conditions for the anionic polymerization have been optimized and provided well-defined polymers with narrow molecular weight distributions. The new polymers formed spherical aggregates as shown by transmission electron microscopy with samples prepared by the freeze-fracture technique. Their morphology is different from those of the cylindrical aggregates formed by bile salts. With the optimized method for anionic polymerization, allyl glycidyl ether was grafted onto a derivative of cholic acid, followed by thiolation, a radical addition, of the allyl groups to introduce amine or carboxylic acid groups to the polymer chains. This radical addition had an efficiency of more than 90%. The resulting polymers were water-soluble and were found to aggregate above a certain critical concentration. It is particularly interesting to observe thermosensitivity of the star polymers bearing amine groups. The thermosensitivity of such polymers can be further tuned by partial acetylation of the amine groups, yielding polymers with cloud points in the temperature range from 15 to 48°C.

Le récepteur X des farnésoïdes (FXR) fait partie de la superfamille des récepteurs nucléaires et agit comme un facteur de transcription suite à la liaison d’un ligand spécifique. Le récepteur FXR, activé par les acides biliaires, joue un rôle essentiel dans le métabolisme des lipides et du glucose en plus de réguler l’homéostasie des acides biliaires. Notre laboratoire a récemment mis en évidence une nouvelle voie de régulation du récepteur PPARγ en réponse au récepteur de la ghréline. En effet, la ghréline induit l’activation transcriptionnelle de PPARγ via une cascade de signalisation impliquant les kinases Erk1/2 et Akt, supportant un rôle périphérique de la ghréline dans les pathologies associées au syndrome métabolique. Il est de plus en plus reconnu que la cascade métabolique impliquant PPARγ fait également intervenir un autre récepteur nucléaire, FXR. Dans ce travail, nous montrons que la ghréline induit l’activation transcriptionnelle de FXR de manière dose-dépendante et induit également la phosphorylation du récepteur sur ses résidus sérine. En utilisant des constructions tronquées ABC et CDEF de FXR, nous avons démontré que la ghréline régule l’activité de FXR via les domaines d’activation AF-1 et AF-2. L’effet de la ghréline et du ligand sélectif GW4064 sur l’induction de FXR est additif. De plus, nous avons démontré que FXR est la cible d’une autre modification post-traductionnelle, soit la sumoylation. En effet, FXR est un substrat cellulaire des protéines SUMO-1 et SUMO-3 et la sumoylation du récepteur est ligand-indépendante. SUMO-1 et SUMO-3 induisent l’activation transcriptionnelle de FXR de façon dose-dépendante. Nos résultats indiquent que la lysine 122 est le site prédominant de sumoylation par SUMO-1, quoiqu’un mécanisme de coopération semble exister entre les différents sites de sumoylation de FXR. Avec son rôle émergeant dans plusieurs voies du métabolisme lipidique, l’identification de modulateurs de FXR s’avère être une approche fort prometteuse pour faire face à plusieurs pathologies associées au syndrome métabolique et au diabète de type 2. / The farnesoid X receptor (FXR) is a ligand-activated transcription factor within the nuclear receptor superfamily. FXR is activated by bile acids and plays a crucial role in the regulation of glucose and lipid metabolism and in bile acid homeostasis. Our group has recently identified the contribution of the ghrelin receptor in the regulation of the nuclear receptor PPARγ. Indeed, ghrelin triggers transcriptional activation of PPARγ through a concerted signaling cascade involving Erk1/2 and Akt kinases. These results support the peripheral actions of ghrelin in diseases associated with the metabolic syndrome. It is recognized that there is interplay between PPARγ metabolic cascade and FXR. Here, we demonstrate that ghrelin promotes FXR transcriptional activity in a dose-dependent manner and also promotes its phosphorylation on serine residues. By using truncated ABC and CDEF constructs of FXR, we found that ghrelin induces FXR activity through the AF-1 and AF-2 activation domains. The ghrelin-induced FXR activity is additive to the induction by the selective agonist GW4064. Also, we demonstrate that FXR is the target of sumoylation, another post-translational modification. In particular, FXR is modified by SUMO-1 and SUMO-3 in a ligand-independent manner. SUMO-1 and SUMO-3 promote dose-dependent transcriptional activity of FXR. Our results show that lysine 122 is the prevalent site of sumoylation by SUMO-1, though a compensation mechanism seems to exist between the various sumoylation sites of FXR. With its emerging role in several metabolic cascades, identification of FXR modulators represents a promising approach for the treatment of the metabolic syndrome and type 2 diabetes.

Diss. (sammanfattning) Stockholm : Karolinska institutet, 2007. / Härtill 4 uppsatser.

Research activities towards the self-assembly of small organic molecules building blocks which lead to form supramolecular gel has increased extensively during the past two decades. The fundamental investigations of the morphological properties and the mechanical properties of these supramolecular gels are crucial for understanding gelation processes. Most supramolecular gelators were discovered by serendipity, but nowadays ratiional design of new gelators has become somewh at feasible. As a consequence, an increasing number of multi stimuli-responsive and functional molecular gels are reported, offering great prospects with myriads of applications includ ing drug delivery and smart materials as shown in scheme 1. Scheme 1 Part 2: Synthesis of semiconductor nanocrystals In the last two decades, the synthetic development of semiconductor col loidal nanocrystals has been extended from the adjustment of their size, shape, and composition of the particles at the molecular level. Such adjustments of nanocrystals at the molecula r level might open different fields of applications in materials and biological sciences. I n this chapter, the concept of the shape contr ol synthesis of colloidal nanocrystals with a narrow size distribution, and the synthesis of composition dependent alloy type mat erials are described (Scheme 2). Scheme 2 Chapter 2: Synthesis of luminescent semiconductor nanocrystals Part 1: Cadmium deoxycholate: a new and efficient precursor for high ly luminescent CdSe nanocrystals This part demonstrates the sy nthesis of Cadmium deoxycholate (CdDCh2), an efficient Cd-precursor for the synthesis of high quality, monodisperse, multi color emittting CdSe Scheme 3 nanocrystals, while maintaining their high photoluminescent quantum efficiency (Scheme 3). The high thermal stability of CdDCh2 (decomposition temperature: 332 °C) was utilized to achieve high injection and growth temperatures (∼300 °C) for the syntheesis of red emitting nanocrystals with a sharp f ull width at half maximum (FWHM) and multiple excitonic absorption features. We believe that CdDCh2 can be useful for the prreparation of other nanomaterials such as CdS, CdTe and CdSe@CdS core-shell QDs. Part 2: Ligand mediated exccited state carrier relaxation dynamics of Cd1-xZnxSe1-ySy NCs derived from bile salts Bile salts of Cadmium and Zinc provide a convenient and inexpensive single step synthetic route for highly photoluminescent and stable semiconductor nanocrystals (NCs). The high thermal stabilities of Cadmium and Zinc deoxycholates (CdDCh2 and ZnDCh2) allowed us to fine-tune the synthesis of the NCs at high temperatures while maintaining the monodispersity, crystallinity and reproducibility (Scheme 4). Organic capping agent induced lattice strain affects the excited Scheme 4 state relaxation processes of the NCs. The analysis of photoluminescence decay profiles revealed that the average lifettime decreased with the increasing lattice strain of the NCs. A kinetic stochastic model of photoexcited carrier relaxation dynamics of NCs was employed to estimate the values of the radiative recombination rates, the photoluminescence quenching rates and the non-radiative recombination rates of the NCs. These data showed that the non-radiative relaxation rates and the numbeer of surface trap states increased with the incrreasing lattice strain of the NCs. Such types of NCs can have great potential in nonlinear optics, photocatalysis and solar cells. Chapter 3: Synthesis of organic-inorganic hybrid materials Part 1: Hierarchical self-assembly of photoluminescent CdS nanoparticles into bile acid derived organogel: morphological and photophysical properties In this part a strategy towards integrating photoluminescent semiconductor nanoparticles into a bio-surfactant derived organoggel has been reported. A facially amphiphilic bile thiol was used for capping CdS nanoparticless (NPs) which were embedded in a gel derived from a new bile acid organogelator in order to furnish a soft hybrid material (Scheme 5). The presence of CdS NPs in a well-ordered 1D array on the organogel network was confirmed using microscopic Scheme 5 techniques. Photophysical stuudies of the gel–NP hybrid revealed resolved excitation and emission characteristics. Time resolved spectroscopic studies showed that the average lifetime value of the CdS NPs increased in the gel state compared to the sol phase. A kinetic model was utilized to obtain quantitative information about the different decay pathways of the photoexcited NPs in the sol and gel states. Part 2: A novel strategy towards designing a CdSe quantum dot–metallohydrogel composite material This section describes an efficiient method to disperse hydrophobic CdSe quaantum dots (QDs) in an aqueous phase using cetyltriimethylammonium bromide (CTAB) micelles without any surface ligand exchange. The water soluble QDs were then embedded in the 3D self-assembled fibrillar networks (SAFINs) of a hydrogel showing homogeneous dispersibility as eviidenced by Scheme 6 optical and electron microscopico techniques (Scheme 6). The photophyssical studies of the hydrogel–QD from composite are reported for the first time. These composite materials may have potential applications in biology, optoelectronics, sensors, non-linear optics and materials science. Part 3: Photophysical aspectts of self-assembled CdSe QD-organogel hyybrid and its thermoresponsive properties A luminescent hybrid gel was constructed by incorporating CdSe quantuum dots (QDs) in a facially amphiphilic bile acid derived dimeric urea organogel throough non-covalent interaction between ligands capped on QDs surface and hydrophobic pockets of the gel (Scheme 7). The optical transparency of the hybrid materials and the dirrectionalities of the QDs in the gel medium were confirmed by photophysical and microscopic studies. The detailed excited state dynamics of the QD–organogel hybrid has been reported for the first time with the help of lifetime analysis and a kinetic decay model, and thee data revealed that the average lifetime of the QDs decreased in the gel medium. The reversible thermoresponsive behavior of the QD doped organogel was investigated by steady-state fluorescence spectroscopy. W e believe that the results obtained herein provides a route to develop a thermoresponsive system for practical application, especially because of the spatial assembly between soft organic scaffolds and colloidal QDs. Scheme 7 Part 4: In-situ formation of luminescent CdSe QDs in a metallohydrogel: a strategy towards synthesis, isolation, storage and re-dispersion of the QDs A one step, in-situ, room temperature synthesis of yellow luminesce nt CdSe QD was achieved in a metallohydrog el derived from a facially amphiphilic bile salt, resulting in a QD-gel hybrid (Scheme 8). T he ordered self-assembly and homogeneous distribution of the CdSe QDs in the hydrogel network was observed from optical and electro n micrographs. The different excited state behav iors of the hybrid were revealed for the fir st time using time resolved spectroscopy. Ad ditionally, we described the successful isolation of the photoluminescent CdSe QDs from the gel followed by their re-dispersion in an organic solvent using suitable capping ligands. Scheme 8 Chapter 4: Facially a mphiphilic bile acid derived meta llohydrogel: an efficient template for th e enantioselective Diels-Alder reactio n An enantioselective Diels-Ald er reaction mediated by a facially amphiphilic bile acid derived metallogel scaffold has been a chieved (Scheme 9). Different hydrophobic domains present in Scheme 9 the gel appear to facilitate the enantioselective reaction. Various spectro scopic and electron microscopic techniques were employed to understand the possible reasons for the stereoselectivity in the gel. Subsequently, different counter anion s dependent rate accelerations and induced enantioselectivity in the ZnCh2 gel were studied in detail. These preliminary results of the non-covalent based supramolecular heterogeneous catalysis offer new possibilities for using metallogels as nanoreactors for different stereoselective reactions.

Introdução / Objetivos: O prognóstico do adenocarcinoma ampular pode ser influenciado por fatores como estadiamento e variáveis histopatológicas, como o padrão intestinal ou pancreatobiliar. O diagnóstico do padrão histopatológico pode ser auxiliado pela expressão de citoqueratinas, CK, 7 e 20 e do gene homeobox CDX2. O objetivo do estudo foi analisar associações entre características histopatológicas e sobrevida, e entre padrão histopatológico e expressão de CK7, CK20 e CDX2. Método: Estudo de coorte retrospectivo desenvolvido no Hospital de Clínicas de Porto Alegre entre 2000 e 2011. Foram avaliados dados histopatológicos, estadiamento pTNM, padrão histopatológico e expressão imunoistoquímica e sobrevida. Resultados: A amostra constou de 65 carcinomas ampulares (n = 65). Foi observado padrão intestinal em 46, pancreatobiliar em 16 e outros em três. Sobrevida em cinco anos após duodenopancreatectomia (n = 47) foi de 27%. Associaram-se à menor sobrevida na análise univariada: dois ou mais linfonodos metastáticos, razão de linfonodos, RL, maior ou igual a 20%; estágio IIB em relação a inferiores; tumor de alto grau; invasão linfovascular. Na análise multivariada, metástase linfonodal e RL ≥ 20% influenciaram sobrevida. Conclusões: O pior prognóstico foi associado à metástase linfonodal. Não foi observada associação entre padrão histopatológico e expressão imunoistoquímica. / Background / Objectives: The prognosis of patients with ampullary adenocarcinomas can be influenced by such factors as pTNM stage and histopathological variables, such as intestinal or pancreatobiliary patterns. The characterization of these patterns can be facilitated by the expression of cytokeratins 7 (CK7) and 20 (CK20) and caudal-related homeobox gene 2 (CDX2). The aim of the present study was to analyze the association between the histopathological characteristics and the survival of patients with ampullary adenocarcinomas, as well as the association between the histopathological patterns and CK7, CK20 and CDX2 expression. Methods: This retrospective cohort study was performed at the Clinics Hospital of Porto Alegre between 2000 and 2011 and examined the histopathological data, pTNM stage, histopathological patterns, immunohistochemical expression patterns and survival of patients with ampullary adenocarcinomas. Results: The sample patient population consisted of 65 ampullary carcinomas. Of these carcinoma samples, an intestinal pattern was observed for 46, a pancreatobiliary pattern was observed for 16 and other patterns were observed 3 of the samples. The 5-year survival rate for patients following pancreaticoduodenectomy (n = 47) was 27%. From the univariate analysis, the following variables were associated with shorter survival times: the presence of 2 or more metastatic lymph nodes; positive lymph node ratio (LR) ≥ 20%; stage IIB or greater; high-grade tumors; and lymphovascular invasion. From the multivariate analysis, lymph node metastases and a LR ≥ 20% were shown to influence survival significantly. Conclusions: Lymph node metastases were associated with poor patient prognoses, although no association was found between the histopathological pattern and immunohistochemical expression.

Introdução / Objetivos: O prognóstico do adenocarcinoma ampular pode ser influenciado por fatores como estadiamento e variáveis histopatológicas, como o padrão intestinal ou pancreatobiliar. O diagnóstico do padrão histopatológico pode ser auxiliado pela expressão de citoqueratinas, CK, 7 e 20 e do gene homeobox CDX2. O objetivo do estudo foi analisar associações entre características histopatológicas e sobrevida, e entre padrão histopatológico e expressão de CK7, CK20 e CDX2. Método: Estudo de coorte retrospectivo desenvolvido no Hospital de Clínicas de Porto Alegre entre 2000 e 2011. Foram avaliados dados histopatológicos, estadiamento pTNM, padrão histopatológico e expressão imunoistoquímica e sobrevida. Resultados: A amostra constou de 65 carcinomas ampulares (n = 65). Foi observado padrão intestinal em 46, pancreatobiliar em 16 e outros em três. Sobrevida em cinco anos após duodenopancreatectomia (n = 47) foi de 27%. Associaram-se à menor sobrevida na análise univariada: dois ou mais linfonodos metastáticos, razão de linfonodos, RL, maior ou igual a 20%; estágio IIB em relação a inferiores; tumor de alto grau; invasão linfovascular. Na análise multivariada, metástase linfonodal e RL ≥ 20% influenciaram sobrevida. Conclusões: O pior prognóstico foi associado à metástase linfonodal. Não foi observada associação entre padrão histopatológico e expressão imunoistoquímica. / Background / Objectives: The prognosis of patients with ampullary adenocarcinomas can be influenced by such factors as pTNM stage and histopathological variables, such as intestinal or pancreatobiliary patterns. The characterization of these patterns can be facilitated by the expression of cytokeratins 7 (CK7) and 20 (CK20) and caudal-related homeobox gene 2 (CDX2). The aim of the present study was to analyze the association between the histopathological characteristics and the survival of patients with ampullary adenocarcinomas, as well as the association between the histopathological patterns and CK7, CK20 and CDX2 expression. Methods: This retrospective cohort study was performed at the Clinics Hospital of Porto Alegre between 2000 and 2011 and examined the histopathological data, pTNM stage, histopathological patterns, immunohistochemical expression patterns and survival of patients with ampullary adenocarcinomas. Results: The sample patient population consisted of 65 ampullary carcinomas. Of these carcinoma samples, an intestinal pattern was observed for 46, a pancreatobiliary pattern was observed for 16 and other patterns were observed 3 of the samples. The 5-year survival rate for patients following pancreaticoduodenectomy (n = 47) was 27%. From the univariate analysis, the following variables were associated with shorter survival times: the presence of 2 or more metastatic lymph nodes; positive lymph node ratio (LR) ≥ 20%; stage IIB or greater; high-grade tumors; and lymphovascular invasion. From the multivariate analysis, lymph node metastases and a LR ≥ 20% were shown to influence survival significantly. Conclusions: Lymph node metastases were associated with poor patient prognoses, although no association was found between the histopathological pattern and immunohistochemical expression.

Introdução / Objetivos: O prognóstico do adenocarcinoma ampular pode ser influenciado por fatores como estadiamento e variáveis histopatológicas, como o padrão intestinal ou pancreatobiliar. O diagnóstico do padrão histopatológico pode ser auxiliado pela expressão de citoqueratinas, CK, 7 e 20 e do gene homeobox CDX2. O objetivo do estudo foi analisar associações entre características histopatológicas e sobrevida, e entre padrão histopatológico e expressão de CK7, CK20 e CDX2. Método: Estudo de coorte retrospectivo desenvolvido no Hospital de Clínicas de Porto Alegre entre 2000 e 2011. Foram avaliados dados histopatológicos, estadiamento pTNM, padrão histopatológico e expressão imunoistoquímica e sobrevida. Resultados: A amostra constou de 65 carcinomas ampulares (n = 65). Foi observado padrão intestinal em 46, pancreatobiliar em 16 e outros em três. Sobrevida em cinco anos após duodenopancreatectomia (n = 47) foi de 27%. Associaram-se à menor sobrevida na análise univariada: dois ou mais linfonodos metastáticos, razão de linfonodos, RL, maior ou igual a 20%; estágio IIB em relação a inferiores; tumor de alto grau; invasão linfovascular. Na análise multivariada, metástase linfonodal e RL ≥ 20% influenciaram sobrevida. Conclusões: O pior prognóstico foi associado à metástase linfonodal. Não foi observada associação entre padrão histopatológico e expressão imunoistoquímica. / Background / Objectives: The prognosis of patients with ampullary adenocarcinomas can be influenced by such factors as pTNM stage and histopathological variables, such as intestinal or pancreatobiliary patterns. The characterization of these patterns can be facilitated by the expression of cytokeratins 7 (CK7) and 20 (CK20) and caudal-related homeobox gene 2 (CDX2). The aim of the present study was to analyze the association between the histopathological characteristics and the survival of patients with ampullary adenocarcinomas, as well as the association between the histopathological patterns and CK7, CK20 and CDX2 expression. Methods: This retrospective cohort study was performed at the Clinics Hospital of Porto Alegre between 2000 and 2011 and examined the histopathological data, pTNM stage, histopathological patterns, immunohistochemical expression patterns and survival of patients with ampullary adenocarcinomas. Results: The sample patient population consisted of 65 ampullary carcinomas. Of these carcinoma samples, an intestinal pattern was observed for 46, a pancreatobiliary pattern was observed for 16 and other patterns were observed 3 of the samples. The 5-year survival rate for patients following pancreaticoduodenectomy (n = 47) was 27%. From the univariate analysis, the following variables were associated with shorter survival times: the presence of 2 or more metastatic lymph nodes; positive lymph node ratio (LR) ≥ 20%; stage IIB or greater; high-grade tumors; and lymphovascular invasion. From the multivariate analysis, lymph node metastases and a LR ≥ 20% were shown to influence survival significantly. Conclusions: Lymph node metastases were associated with poor patient prognoses, although no association was found between the histopathological pattern and immunohistochemical expression.