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Synthesis of mannosylated peptides as components for synthetic vaccinesKowalczyk, Renata January 2008 (has links)
The immune system often recognises tumour cells and infectious agents from the unique peptides found on their surfaces therefore, synthetic peptides of similar structure can be used as vaccines to stimulate the immune system. Despite the problems associated with proteolysis and delivery to the immune system, peptide-based vaccines have enormous potential due to their ease of synthesis and purification. The aim of this research was to synthesise ligands for mannose receptors (MRs) that are found on human Antigen Presenting Cells (APCs), for use in synthetic vaccines. Carbohydrate bearing antigens are recognised by MRs which play an important role in binding antigens, migration of dendritic cells (DCs) and interaction of DCs with lymphocytes. Hence, incorporation of a sugar residue into a peptide chain can be used to enhance antigen presentation. This thesis describes the synthesis of fluorescein labelled O-mannosylated peptides using either manual or microwave assisted solid phase glycopeptide synthesis (SPGS) on pre-loaded WANG resin. The mannosylated peptides thus prepared can be tested for their ability to bind mannose receptors on human APCs in vitro. In order to prepare compounds that could be analysed in biological screens, a fluorescent label (5(6)-carboxyfluorescein) was introduced into the glycopeptides via the Nα- or the Nε-amino group of the lysine residue. It was found that preparation of the glycopeptide was more facile when the peptide chain was built onto the Nε of Lys (label into Nα) rather than onto the Nα of Lys (label into Nε). In order to overcome problems experienced when introducing more than one glycosylated building block into the peptide chain, a polyethylene glycol (PEG) linker was employed as a sugar carrier. It was found that mono- and dimannosylated building blocks attached to PEG carrier were incorporated more easily into the peptide chain compared to mono- and dimannosylated serine units. Importantly, microwave technology (CEM Liberty microwave peptide synthesiser) was used for SPGS which resulted in improved purity and yields of the glycopeptides thus prepared with a significant reduction in reaction times. The first fifteen glycopeptides prepared in the present study were tested for binding to mannose receptors. Several compounds have shown improved binding to monocytes (bear MRs) in comparison to lymphocytes (do not bear MRs), in the presence of calcium ions. Calcium dependent binding is specific for C type lectin receptor family that MRs belong to. Five remaining glycopeptides are currently undergoing biological evaluation.
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Synthesis of mannosylated peptides as components for synthetic vaccinesKowalczyk, Renata January 2008 (has links)
The immune system often recognises tumour cells and infectious agents from the unique peptides found on their surfaces therefore, synthetic peptides of similar structure can be used as vaccines to stimulate the immune system. Despite the problems associated with proteolysis and delivery to the immune system, peptide-based vaccines have enormous potential due to their ease of synthesis and purification. The aim of this research was to synthesise ligands for mannose receptors (MRs) that are found on human Antigen Presenting Cells (APCs), for use in synthetic vaccines. Carbohydrate bearing antigens are recognised by MRs which play an important role in binding antigens, migration of dendritic cells (DCs) and interaction of DCs with lymphocytes. Hence, incorporation of a sugar residue into a peptide chain can be used to enhance antigen presentation. This thesis describes the synthesis of fluorescein labelled O-mannosylated peptides using either manual or microwave assisted solid phase glycopeptide synthesis (SPGS) on pre-loaded WANG resin. The mannosylated peptides thus prepared can be tested for their ability to bind mannose receptors on human APCs in vitro. In order to prepare compounds that could be analysed in biological screens, a fluorescent label (5(6)-carboxyfluorescein) was introduced into the glycopeptides via the Nα- or the Nε-amino group of the lysine residue. It was found that preparation of the glycopeptide was more facile when the peptide chain was built onto the Nε of Lys (label into Nα) rather than onto the Nα of Lys (label into Nε). In order to overcome problems experienced when introducing more than one glycosylated building block into the peptide chain, a polyethylene glycol (PEG) linker was employed as a sugar carrier. It was found that mono- and dimannosylated building blocks attached to PEG carrier were incorporated more easily into the peptide chain compared to mono- and dimannosylated serine units. Importantly, microwave technology (CEM Liberty microwave peptide synthesiser) was used for SPGS which resulted in improved purity and yields of the glycopeptides thus prepared with a significant reduction in reaction times. The first fifteen glycopeptides prepared in the present study were tested for binding to mannose receptors. Several compounds have shown improved binding to monocytes (bear MRs) in comparison to lymphocytes (do not bear MRs), in the presence of calcium ions. Calcium dependent binding is specific for C type lectin receptor family that MRs belong to. Five remaining glycopeptides are currently undergoing biological evaluation.
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Polyoctanediol citrate/sebacate elastomers : a new class of tissue engineering materialsDjordjevic, Ivan January 2009 (has links)
The thesis focuses on elastic polymer material that is biodegradable and compatible with human cells and tissues. The presented research describes polymer synthesis, material processing, physico-chemical investigation and biological tests performed on this novel biomaterial.
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Αλληλεπιδράσεις επιφανειο-δραστικοποιημένων νανοσωματιδίων CdSe σε χειρόμορφο υγροκρυσταλλικό περιβάλλον / Interactions of surface-functionalized CdSe nanoparticles in chiral liquid-crystalline environmentΚαραταΐρη, Ευαγγελία (Εύα) 06 December 2013 (has links)
Η διασπορά κβαντικών τελειών ως πυρήνων αταξίας σε οργανωμένα συστήματα, έχει προσελκύσει επιστημονικό ενδιαφέρον και ερευνητικές δραστηριότητες, τόσο στο πεδίο της φυσικής στερεάς κατάστασης, όσο και σε αυτό της επιστήμης των υλικών. Δεν είναι σπάνια η διαπίστωση ότι υβριδικά συστήματα που προκύπτουν από συνδυασμούς όπως αυτός των υγρών κρυστάλλων και των νανοσωματιδίων, παρουσιάζουν αξιοσημείωτες και συχνά αναπάντεχες νέες ιδιότητες. Το θέμα της παρούσας διδακτορικής διατριβή κινείται σε δύο άξονες: το σχεδιασμό και την χημική σύνθεση κβαντικών τελειών επιφανειακά κατεργασμένων, για ελεγχόμενη αλληλεπίδραση με υγρούς κρυστάλλους, και τη μελέτη των φυσικών ιδιοτήτων των σύνθετων νανοδομημένων υγροκρυσταλλικών συστημάτων, που σχηματίζονται με διασπορά των νανοσωματιδίων αυτών σε χειρόμορφους θερμοτροπικούς υγρούς κρυστάλλους.
Στο πρώτο μέρος της διατριβής παρουσιάζεται η χημική σύνθεση και επιφανειακή τροποποίηση κβαντικών τελειών CdSe, με υδρόφοβες επιφανειοδραστικές ομάδες τρι– οκτυλοφωσφίνης (TOP)/ελαϊκής αμίνης (ΟΑ), TOP/οκταδεκυλαμίνης, ΤOP/δωδεκυλα-μίνης, TOP/οκτυλαμίνης και τριφαινυλφωσφίνης/τριφαινυλαμίνης. Ο χαρακτηρισμός της δομής και των οπτικών ιδιοτήτων των νανοσωματιδίων έγινε με περίθλαση σκόνης ακτίνων Χ, φασματοσκοπία υπεριώδους–ορατού και φασματοσκοπία υπερύθρου, ενώ για τη διερεύνηση της μορφολογίας τους και τον προσδιορισμό των διαστάσεών τους, χρησιμοποιήθηκε ηλεκτρονική μικροσκοπία διέλευσης. Οι χημικές συνθέσεις, βασισμένες στην θερμολυτική διάσπαση οργανομεταλλικών ενώσεων, οδήγησαν σε επιτυχημένη παραγωγή σφαιρικών νανοσωματιδίων, μέσης διαμέτρου 3–4 nm, με στενή κατανομή μεγεθών και καλή διαλυτότητα σε οργανικούς διαλύτες.
Στη συνέχεια μελετήθηκαν οι επιπτώσεις από τη διασπορά των νανοσωματιδίων CdSe με TOP και OA, με μέση διάμετρο 3.2 nm στη θερμοδυναμική και μοριακή οργάνωση χειρόμορφων υγρών κρυστάλλων, με τις τεχνικές της θερμιδομετρίας εναλλασσόμενης θερμικής εισόδου και με περίθλαση σκόνης ακτίνων Χ. Το ενδιαφέρον επικεντρώθηκε στη θερμοκρασιακή περιοχή των Μπλε φάσεων και στη μετάπτωση φάσης SmA–SmC*. Οι Μπλε φάσεις παρόλο που παρουσιάζουν εξέχουσες ιδιότητες για καινοτόμες εφαρμογές στη βιομηχανία οθονών και αισθητήρων, ωστόσο, είναι σταθερές σε πολύ στενά θερμοκρασιακά εύρη, μεταξύ Ισοτροπικής και Χειρόμορφης Νηματικής φάσης, γεγονός που δεν ευνοεί τη χρήση τους. Οι πειραματικές μετρήσεις αποκάλυψαν νέα φαινόμενα, όπως τη σταθεροποίηση της θερμοκρασιακής περιοχής της Μπλε φάσης ΙΙΙ (BPIII) σε μεγάλο θερμοκρασιακό εύρος, σε σχέση με τον αμιγή υγρό κρύσταλλο, και τη μετατόπιση των θερμοκρασιών μετάπτωσης σε μικρότερες τιμές. Η θεωρητική μελέτη που πραγματοποιήθηκε καταδεικνύει ισχυρή αλληλεπίδραση των νανοσωματιδίων με τις σειρές πλεγματικών ατελειών του υγρού κρυστάλλου. Παράλληλα τα αποτελέσματα φανερώνουν ότι ο χαρακτήρας Μέσου Πεδίου–Landau της μετάπτωσης SmA–SmC*, για το ίδιο σύστημα, δεν αλλοιώνεται. Η αλληλεπίδραση των κβαντικών τελειών CdSe με επιφανειακή δραστικοποίηση ΟΑ και TOP με χειρόμορφους υγρούς κρυστάλλους, παρέχει δυνατότητες και δημιουργεί σημαντικές προϋποθέσεις για νέες τεχνολογικές εφαρμογές και επιστημονικές εξελίξεις. / One dimensional semiconductor structures are intriguing materials for both fundamental research and industrial applications. On the other hand the long-range nature of the orientational order of liquid crystals is responsible for many fascinating optical, electromechanical and critical properties of these materials. Hybridization of these two fields may lead to novel materials with unusual optical and physical properties that are of considerable importance for technological applications as well as for basic physics studies on phase transitions and critical phenomena. In this context, complex soft materials were formulated that result from the dispersion of surface functionalized quantum dots in thermotropic chiral LCs. Special attention was paid to the synthesis and properties of the nanocrystals and to the dispersion state, as well as to the thermal and structural study of the composite materials.
In the first part of this Thesis a chemical approach for the synthesis of semiconducting quantum dots is presented. The method, based on the thermolytic decomposition of organometallic compounds, leads to the production of spherical nanocrystalline particles highly soluble in organic media, with an average diameter of 3.2 nm, capped with a variety of amine and phosphine molecules. The as-synthesized nanoparticles were characterized by means of powder X-ray diffraction, ultraviolet–visible spectroscopy, Fourier transform infrared spectroscopy and transition electron microscopy.
The second part of the Thesis is concentrated on the effects upon the Blue phases and smectic-A to chiral smectic-C* phase transition of the liquid crystal CE8, arising from the dispersion of CdSe quantum dots, surface-treated with oleylamine and trioctylphosphine. For this purpose, ac calorimetry and X-ray scattering studies have been carried out. Liquid– crystalline blue phases exhibit exceptional properties for applications in the display and sensor industry. However, in single component systems, they are stable only for a very narrow temperature range between the isotropic and the chiral nematic phase, a feature that severely hinders their applicability. The systematic high-resolution calorimetric studies revealed that Blue phase III is effectively stabilized in a wide temperature range by mixing surface-functionalized nanoparticles with chiral liquid crystals. The calorimetric measurements also revealed substantial downshifts of the transition temperature. Theoretical arguments show that the aggregation of nanoparticles at disclination lines is responsible for the observed effects. Furthermore, it was found that at the SmA–SmC* phase transition, as a function of increasing nanoparticle concentration, the heat capacity anomalies display an extended-mean-field to mean-field–like crossover behavior, while the temperature dependence of the tilt angle remains bulk-like with no occurrence of pretransitional effects. The interaction of CdSe quantum dots with the cores of disclination lines gains further support, as bound disclination lines are expected to affect smectic–smectic phase transitions in a very limited manner.
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Antimaláricos potenciais: latenciação de primaquina e desetilcloroquina e estudo da síntese de pró-fármacos peptídicos de liberação específica / Potential antimalarials: Latency of primaquine and desethylchloroquine and study of the synthesis of specific release peptidic prodrugsKátia Cirlene Alves Botelho 09 October 2008 (has links)
A Malária continua sendo a mais difundida e devastadora doença infecciosa, com aproximadamente 300 milhões de casos anuais e mais de 2 milhões de pessoas vivendo em áreas de risco. Entre os parasitas do gênero plasmodium causadores da malária em humanos, o plasmodium falciparum é a espécie mais letal. Este projeto teve como objetivo a síntese de pró-fármaco recíproco de cloroquina e primaquina e de pró-fármacos duplicados de cloroquina e de primaquina utilizando, para tanto, espaçantes inespecíficos (carboxílicos). Espera-se que o pró-fármaco recíproco permita a cura radical em casos de malária vivax e que os derivados duplicados apresentem maior eficácia, com diminuição da toxicidade, especialmente no caso do derivado de primaquina. Além desses compostos, propôs-se a síntese de pró-fármacos duplicados de cloroquina mediante a ligação com grupo espaçante específico (peptídeos) à cisão pela falcipaína. Tais derivados são potencialmente ativos em malária causada pelo P. falciparum resistente à cloroquina. / Malaria remains the world\'s most widespread and devastating infectious disease, with approximately 300 million annual cases and more than 2 million casualties. Among the protozoan parasites of the genus Plasmodium causing malaria in humans, Plasmodium falciparum is the most lethal species. This project had as objective the synthesis of reciprocal prodrug of chloroqine and primaquine using, for in such a way, inespecífics agents (carboxylics). One expects that the mutual prodrug allows to the radical cure in cases of malaria vivax and that the derivatives duplicates present greater effectiveness, with reduction of the toxicity, especially in the case of the primaquine derivative. Beyond these composites, it was considered synthesis of mutual prodrugs of chloroquine by means of the linking with specific carrier group (peptides) to the split for falcipain. Such derivatives are potentially active in malaria caused for the resistant P. falciparum to the chloroquine.
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De la synthèse chimique de nanoparticules aux matériaux magnétiques nano-structurés : une approche pour des aimants permanents sans terre rare / From the chemical synthesis of nanoparticles to nano-structured magnetic materials : A bottom-up approach for rare earth free permanent magnetsPousthomis, Marc 08 January 2016 (has links)
La fabrication d’aimants permanents nano-structurés est l’une des solutions envisagées pour remplacer les aimants actuels à base de terres rares, pour lesquelles se posent des problèmes géopolitiques et environnementaux. Dans le but d’élaborer de tels matériaux, nous avons suivi une approche bottom-up utilisant des méthodes chimiques.Nos travaux ont visé dans un premier temps à synthétiser des nanoparticules (NPs) magnétiques dures qui peuvent servir de briques élémentaires dans la fabrication d’aimants nano-structurés. Notre étude systématique sur des nanobâtonnets de cobalt (NBs Co) synthétisés par voie polyol, a montré que leur champ coercitif augmente de 3 à 7 kOe avec la diminution du diamètre et l’augmentation du rapport d’aspect structural. Des simulations micro-magnétiques ont montré qu’un mécanisme de retournement d’aimantation par nucléation-propagation de parois rendait compte des résultats expérimentaux. Des NPs bi-métalliques FePt et tri-métalliques FePtX (X = Ag, Cu, Sn, Sb) de structure CFC ont été obtenues par l’adaptation d’une synthèse organométallique ou par la réduction d’acétylacétonates métalliques. Les recuits à haute température (650°C pour FePt, 400°C pour FePtX) ont conduit à la transition de phase FePt CFC L10 et à des champs coercitifs élevés (>12 kOe). La maîtrise d’un procédé multi-étapes, impliquant la protection des NPs FePt CFC par une coquille MgO et un recuit à 850°C, a permis d’obtenir des NPs FePt L10 de taille moyenne 10 nm présentant des champs coercitifs jusqu’à 27 kOe.La seconde partie de nos travaux a porté sur l’assemblage de NPs présentant des anisotropies différentes. Deux systèmes ont été étudiés : FePt CFC+FeCo CC, FePt L10+NBs Co HCP. Dans les deux cas, le contact entre les deux types de NPs a été favorisé par l’utilisation d’un ligand bi-fonctionnel suivi d’un traitement thermique. Dans le système FePt+FeCo, le recuit à haute température (650°C), nécessaire pour obtenir la phase FePt L10, a entraîné l’inter-diffusion des phases et la quasi-disparition de la phase FeCo CC. Dans le second système FePt+Co, un comportement de spring magnet a clairement été identifié, les deux phases étant efficacement couplées. L’inter-diffusion des phases a été limitée par la température modérée du recuit (400°C). Un champ coercitif de 10 kOe a été mesuré pour une teneur en Pt de seulement 25%at., malgré la perte de la forme anisotrope des NBs Co. / The production of nano-structured permanent magnets is a promising alternative to rare earth magnets, which induced geopolitical and environmental issues. In order to elaborate such materials, we followed a bottom-up approach based on chemical methods. A first objective consisted in synthesizing hard magnetic nanoparticles (NPs) as building blocks for nano-structured magnets. The properties of cobalt nanorods (Co NRs) synthesized by the polyol process have been systematically studied. Coercive fields could be raised from 3 to 7 kOe by decreasing the diameter and improving the structural aspect ratio. Micro-magnetic simulations showed that a magnetization reversal following a nucleation and domain-wall propagation process could explain the experimental results. Bi-metallic FePt and tri-metallic FePtX (X = Ag, Cu, Sn, Sb) exhibiting the FCC structure were synthesized following two routes based on the reduction of an organometallic Fe precursor or of metallic acetylacetonates. Annealing at high temperatures (650°C for FePt, 400°C for FePtX) allowed the phase transition FCC L10 to occur, leading to high coercive fields (>12 kOe). A multi-steps process, involving the protection of FePt NPs with an MgO shell and an annealing at 850°C, was optimized to produce L10 FePt NPs with a mean size of 10 nm and a coercivity up to 27 kOe. In the second part of our study, we worked on assemblies of NPs with different magnetic anisotropies. Two systems were studied : FCC FePt+BCC FeCo, L10 FePt+HCP Co NRs. In both cases, the contact between the two types of NPs was favored by the presence of a bi-functional ligand followed by an annealing step. Concerning the FePt+FeCo system, the high temperature annealing (650°C), required to get the L10 FePt phase, led to the inter-diffusion of the phases and to the dissolution of the BCC FeCo phase. For the FePt+Co system, a spring magnet behavior has been clearly evidenced, the two phases being efficiently coupled The inter-diffusion of the phases was limited thanks to the fairly low annealing temperature (400°C). A coercive field of 10 kOe was measured for a Pt content as low as 25%at., eventhough the Co NRs anisotropic morphology was lost
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Estudo das propriedades estruturais, ópticas e magnéticas de nanopartículas de Zn1-xMTxO (MT=Mn, Fe) obtidas por diferentes métodos de sínteseCosta, Ivani Meneses 27 February 2015 (has links)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / In this work we have studied the magnetic, optical and structural properties of ZnO nanoparticles pure and doped with different concentrations of Fe and Mn synthesized by three different synthesis methods; co-precipitation (CP), hydrothermal (SH) and thermal decomposition (DT). The samples were characterized by measurements of X-ray diffraction (XRD) and analyzed allied to Rietveld refinement method, absorption in the UV-Vis region, scanning and transmission electron microscopy (SEM and TEM), and magnetization measurements as a function of field and temperature (MvsH, MvsT). Through XRD analysis we have observed a dependence of the nanoparticle size with increasing temperature for both CP and SH methods well as a change in morphology with temperature for the samples system synthesized by SH. XRD analysis through the Williamson-Hall plot and TEM images show that particles obtained by SH and CP methods present an anisotropic growth, different of the particles obtained by DT method, that they present a spherical-like shape. The XRD results for Zn1-xFexO systems obtained by the CP and SH present only one phase but from point of view magnetic properties we have observed that these samples present transition at low temperature (T = 10 K) similar to an antiferromagnetic ordering. However, the Zn1-xFexO samples obtained by DT synthesis we have observed a paramagnetic behavior evidenced by MvsT curves. Therefore, at room temperature the MvsH curves indicated a ferromagnetic behavior. All Mn-doped ZnO samples present a paramagnetic behavior. The UV-Vis results show for all systems a slow increase in gap band with increases of dopant concentration. / Neste trabalho estudamos as propriedades magnéticas, ópticas e estruturais de nanopartículas de ZnO puras e dopadas com diferentes concentrações Fe e Mn sintetizadas por três diferentes métodos de síntese; co-precipitação (CP), hidrotérmico (SH) e decomposição térmica (DT). As amostras foram caracterizadas por medidas de difração de raios X (DRX) e analisadas juntamente ao método de refinamento Rietveld, absorção na região UV-Vis, microscopia eletrônica de varredura e de transmissão (MEV e MET) e medidas de magnetização em função do campo e da temperatura (MvsH, MvsT). Através das análises de DRX, nós temos observado uma dependência do tamanho da nanopartícula com o aumento da temperatura para ambos os métodos CP e SH, bem como uma variação na morfologia com a temperatura para o sistema de amostras sintetizado pela SH. Análises do gráfico de Williamson-Hall e imagens de MET mostram que as partículas obtidas através dos métodos SH e CP apresentam um crescimento anisotrópico, diferentemente das obtidas pelo método de DT, as quais apresentam morfologia esférica. Além disso, os resultados de DRX mostram que os sistemas Zn1-xFexO obtidos pela CP e SH apresentam somente uma fase, porém do ponto de vista das propriedades magnéticas observamos que as amostras apresentam uma transição em baixa temperatura (T = 10 K) similar a um ordenamento antiferromagnético. Por outro lado, as amostras de Zn1-xFexO obtidas pela síntese de DT observamos um comportamento paramagnético evidenciados pelas curvas de MvsT. No entanto, em temperatura ambiente as curvas de MvsH indicaram um comportamento ferromagnético. Todas as amostras de ZnO dopadas com Mn apresentam um comportamento típico de um material paramagnético. Resultados de absorção de UV-Vis para todos os sistemas estudados mostram um leve aumento na energia de gap com o aumento da concentração do dopante.
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Estudo das sínteses de peptídeos em fase sólida passo a passo e convergente a 60 °C usando aquecimento convencional e micro-ondas / Study of stepwise and convergent solid-phase peptide syntheses at 60ºC using conventional and microwave heatingsCarina Loffredo 21 December 2009 (has links)
É sabido que: (i) as sínteses individual e múltipla (manual e automática), bem como a construção de bibliotecas e micro-arranjos de peptídeos sintéticos empregam a metodologia da fase sólida (SPFS); (ii) apesar do desenvolvimento atual desta metodologia sintética, os químicos de peptídeos continuam se deparando com problemas e limitações inerentes a ela; (iii) muitos trabalhos relatam a sua agilização pelo uso de altas temperaturas, mas poucos revelam preocupação com a integridade quiral dos peptídeos-alvo. Portanto, o presente trabalho objetivou dar continuidade à nossa investigação pioneira das: 1) incidência da enantiomerização dos aminoácidos e/ou de outras reações secundárias nas SPFS passo a passo de peptídeos a 60 °C; 2) viabilidade de realização de todas as etapas da síntese convergente em fase sólida (SCPFS) a 60 °C. Em relação ao tópico 1, os peptídeos-alvo escolhidos tinham tamanho e sequência variáveis que incluiam os aminoácidos trifuncionais problemáticos Cys, Ser, His, Met e Trp. Todos eles foram obtidos por SPFS passo a passo convencional e a 60 °C usando aquecimento convencional e micro-ondas. A identificação e a quantificação dos isômeros contaminantes foram feitas com a ajuda de padrões resultantes da SPFS passo a passo convencional e de métodos analíticos (RP-HPLC, LC-ESI/MS, CE e análise quiral de aminoácidos) em condições estabelecidas por nós. Foi constatado que: (i) as nossas condições de acoplamento são mais econômicas que as usuais, pois empregam menor concentração e excesso molar de N-acil-aminoácidos; (ii) nelas, a SPFS a 60 °C usando o aquecimento convencional é simples, prática, de custo relativamente baixo, demanda ½ do tempo da SPFS convenciona e não compromete significativamente a integridade quiral dos aminoácidos; (iii) nas condições similares, a SPFS passo a passo a 60 °C assistida por micro-ondas é mais rápida (realizada em ¼ do tempo gasto na SPFS convencional), porém mais cara e acompanhada de aumento significativo da enantiomerização da Cys; (iv) a mistura 25% DMSO/tolueno, nunca antes utilizada na SPFS assistida por micro-ondas, favoreceu a formação de contaminantes contendo Met oxidadas a sulfóxidos durante as sínteses do fragmento CCK24-33NS, mas o mesmo ocorreu quando DMF foi usado nas sínteses da CCK-33 NS; (v) outras reações secundárias típicas da SPFS passo a passo não foram intensificadas significativamente nas nossas condições sintéticas a 60 °C. Quanto ao tópico 2, foi escolhida a CCK-33 NS como modelo peptídico. Foi constatado que: (i) a etapa de obtenção dos fragmentos peptídicos protegidos que atuariam como doadores de acila (D.A.) e aceptor de acila (A.A.) de partida pode ser ágil e bem sucedida pela SPFS passo a passo a 60 °C nas nossas condições experimentais usando o aquecimento convencional; (ii) DMF, NMP e 25% DMSO/Tolueno foram adequados à solubilização dos fragmentos D.A. e dos reagentes necessários à sua ativação a 60 °C; (iii) a 60 °C, tais solventes também intumesceram satisfatoriamente a CCK24-33NS-resina Rink amida, A.A. de partica; (iv) o aquecimento convencional permitiu que algumas reações de acoplamento entre os D.A. e A.A. escolhidos fossem realizadas com sucesso; na maioria dos casos em que isso não ocorreu, o uso combinado das micro-ondas e agitação sob atmosfera inerte mediaram a formação do produto desejado; (v) a natureza dos fragmentos D.A. e A.A. é fator limitante na SCPFS, mesmo a 60 °C e usando o aquecimento convencional ou as micro-ondas, e, portanto, ele precisa ser melhor estudado. / It is well known that: (i) individual and multiple peptide syntheses (manual and automatic) as well as construction of synthetic peptide libraries and micro-arrays are all based on solid phase chemistry (SPPS); (ii) despite the current development of such synthetic methodology, peptide chemists are still facing its problems and inherent limitations; (iii) many previous works employed high temperatures to accelerate stepwise SPPS, but only a few showed concern about the preservation of the chiral integrity of the target peptide. Therefore, the main goal of the present work was to continue our pioneering investigation of: 1) the incidence of amino acids enantiomerization and/or other side-reactions in the stepwise SPPS at 60°C, 2) the viability of performing all steps of the convergent synthesis on a solid support (CSPPS) at 60°C. With regard to the topic 1, the peptides chosen as targets had variable size and sequence, which included the tricky trifunctional amino acids Cys, Ser, His, Met and Trp. The peptides were synthesized by conventional stepwise SPFS and at 60 °C using conventional or microwave heating. Identification and quantification of the contaminant isomers was done with the aid of standards resultant from conventional stepwise SPPS and of analytical methods (RP-HPLC, LC-ESI/MS, CE and chiral amino acids analysis) in conditions established in our laboratory. It was shown that: (i) our coupling conditions are cheaper than the usual ones as they employ lower concentration and excess of N-acyl-amino acids; (ii) under them, stepwise SPPS at 60 °C using the conventional heating is simple, practical, relatively low-cost, demands half of the time required by conventional stepwise SPPS and does not cause the enhancement of amino acids enantiomerization; (iii) under similar conditions, microwave-assisted stepwise SPPS at 60 °C is faster (it demands only one-fourth of the time spent in the conventional stepwise SPPS), but it is more expensive and causes significant damage specially to the chiral integrity of Cys; (iv) the binary mixture 25% DMSO/toluene, never used earlier in microwave-assisted stepwise SPPS, led to the formation of contaminants with Met oxidized to its sulfoxides during the synthesis of CCK24-33NS; however, it also occurred when DMF was used in the synthesis of CCK-33 NS; (v) other side reactions typical of stepwise SPPS were not significantly intensified under our conditions at 60 °C. Concerning to the topic 2, CCK-33 NS was chosen as the model peptide. It was shown that: (i) the synthesis of the protected peptides that would act as acyl donor (A.D.) or as the starting acyl aceptor (A.A.) can be fast and successfully achieved at 60 °C under our experimental conditions using conventional heating; (ii) DMF, NMP and 25% DMSO/toluene dissolved all A.D. and the reagents required for their activation at 60 °C; (iii) at this temperature, such solvents were also able to properly swell CCK24-33NS-Rink amide resin, the starting A.A.; (iv) the conventional heating allowed for some coupling reactions between A.D. and A.A., but in most cases in which it did not occur, the combined use of microwaves and stirring under inert atmosphere mediated the formation of the desired products; (v) the nature of fragments A.D. and A.A. is a limiting factor in the CSPPS even at 60 °C and using the conventional or microwave heating; therefore, it should be further studied.
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DEVELOPMENT OF ARYL ISONITRILES AS ANTIMICROBIAL AGENTS, AND TOTAL SYNTHESIS OF 17-NOR-EXCELSINIDINEKwaku Kyei-Baffour (6616715) 15 May 2019 (has links)
<p> </p>
<p>Infectious diseases caused by bacteria, fungi, and
plasmodium parasites are a huge global health problem which ultimately leads to
millions of deaths annually. The emergence of
strains that exhibit resistance to nearly every class of antimicrobial agents,
and the inability to keep up with these resistance trends has brought to the
fore the need for new therapeutic agents (antibacterial, antifungal, and
antimalarial) with novel scaffolds and functionalities capable of targeting microbial
resistance. A novel class of compounds featuring an aryl isonitrile moiety has
been discovered that exhibits potent inhibitory activity against several
clinically relevant strains of methicillin-resistant <i>Staphylococcus aureus</i> (MRSA). Synthesis, structure-activity relationship (SAR) studies, and
biological investigations have led to lead molecules that exhibit anti-MRSA inhibitory
activity as low as 1 – 2
µM. The most potent compounds have
also been shown to have low toxicity against mammalian cells and exhibit <i>in
vivo</i> efficacy in MRSA skin and thigh infection mouse models.</p>
<p>The
novel aryl isonitriles have also been evaluated for antifungal activity. This study
examines the SAR of aryl isonitrile compounds and showed the isonitriles as
compounds that exhibit broad spectrum antifungal activity against species of <i>Candida</i>
and <i>Cryptococcus</i>. The most potent derivatives are capable of inhibiting
growth of these pathogens at concentrations as low as 0.5 µM. Notably, the most active compounds exhibit
excellent safety profile and are non-toxic to mammalian cells up to 256 µM.</p>
<p>Beyond the antibacterial and antifungal
activities, structure-antimalarial relationship analysis of over 40 novel aryl
isonitrile compounds has established the importance of the isonitrile
functionality as an important moiety for antimalarial activity. Of the many
isonitrile compounds exhibiting potent antimalarial activity, two have emerged
as leads with activity comparable to that of Artemisinin. The SAR details
presented in this study will prove essential for the development new aryl
isonitrile analogues to advance them to the next step in the antimalarial drug
discovery process.</p>
<p>17-nor-Excelsinidine,
a zwitterion monoterpene indole alkaloid isolated from <i>Alstonia scholaris</i> is a subject of synthetic scrutiny. This is
primarily due to its intriguing chemical structure which includes a bridged
bicyclic ammonium moiety, and its anti-adenovirus and anti-HSV activity. Herein
we describe a six-step total synthesis of (±)-17-nor-Excelsinidine
from tryptamine. Key to the
success of this synthesis is the use of palladium-catalyzed carbonylative heck
lactamization methodology which built the 6, 7-membered ring lactam in one
step. The resulting pentacyclic product, beyond facilitating the easy access to
(±)-17-nor-Excelsinidine,
could also serve as a precursor to other related indole alkaloids.</p>
<br>
<p> </p>
<p></p>
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Concise Stereoselctive Synthesis Of Aspidoalbidine Alkaloids & Spliceostatin DerivativesJosh R Born (8762934) 12 October 2021 (has links)
<div>Enantioselective syntheses of hexacyclic aspidoalbidine alkaloids (+)-fendleridine and (+)-acetylaspidoalbidine are described. These syntheses feature an asymmetric decarboxylative allylation and photocyclization of a highly substituted enaminone. Also, the synthesis highlights the formation of a C19-hemiaminal ether via a reduction/condensation/intramolecular cyclization cascade with the C21-alcohol. The present synthesis provides convenient access to the aspidoalbidine hexacyclic alkaloid family in an efficient manner.</div><div>A copper-catalyzed cross-coupling is described. Use of Cu(I) salts in the presence of allyl bromides and organostannyl furans were found to undergo catalytic turnover under ambient conditions and afford the coupled products in good to great yields. Model substrate screening led to conditions used in the concise formal synthesis of FR901464 analogues. Optimization of the described coupling step led to suppression of undesired isomers and byproducts affording the desired diene coupled product in high yield, stereo-, and regioselectivity on a multigram scale. Novel protection of the resulting diene moiety as an unconventional protecting group, and a facile four-step single column chromatographic stereoselective sequence are also reported.</div>
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