[Truncated abstract] This study focussed on how isolation and environmental heterogeneity in salt lakes has influenced intraspecific variation in the calanoid copepod Calamoecia clitellata. Calamoecia clitellata relies on passive vectors for dispersal, and this, coupled with the insular nature of salt lakes, may promote genetic divergence at a molecular level. When contrasting environments are involved, genetic divergence may also occur at the life history level, possibly due to local adaptation. I examined the distribution of genetic variation among 14 populations in Western Australia using molecular genetic markers, and examined variation in life history traits among contrasting environments. To ascertain how isolation had influenced molecular genetic variation, I determined population genetic structure and used a phylogeographic approach to infer the impact of historical events. Environmentally induced variation was also evident in the field, with a switch from subitaneous egg production to resting egg production coinciding with changing environmental conditions. It is proposed that plasticity in life history traits has evolved in response to temporal environmental heterogeneity … It can be concluded that isolation in salt lakes in Western Australia has influenced molecular and phenotypic variation in C. clitellata in contrasting ways. At the molecular level, contemporary and historical isolation have promoted genetic divergence of populations, yet when coupled with environmental heterogeneity, marked phenotype plasticity has arisen. This study raises questions as to whether phenotype plasticity is a widespread phenomena in zooplankton found in temporary saline waters and an adaptive strategy to tolerate marked temporal environmental heterogeneity

Made available in DSpace on 2016-12-23T13:47:35Z (GMT). No. of bitstreams: 1 Rafael Almeida Magris.pdf: 1237040 bytes, checksum: 07bea7179db169152f53f5f9f64662ff (MD5) Previous issue date: 2008-03-24 / A variabilidade interanual, sazonal e entre as fases da maré da comunidade de Copepoda no estuário do rio Mucuri (Bahia, Brasil) foi estudada. Foram coletadas amostras de plâncton em cada estação do ano por um período de cinco anos (2002-2006) em três pontos de amostragem; sendo que em um deles, as amostragens aconteceram de acordo com o ciclo de marés (duas na enchente e duas na vazante). Dados de temperatura, salinidade, pluviosidade e vazão do rio foram obtidos. O inverno e o verão se destacaram por representarem o período seco e o chuvoso, respectivamente. A representatividade de Copepoda na comunidade zooplanctônica variou entre 40 e 63% da abundância total de espécies, e foi composta por 46 taxa, sendo dominada por espécies comuns nos ecossistemas estuarinos (Temora turbinata, Parvocalanus crassirostris, Acartia lilljeborgi, Oithona hebes, dentre outras). Foram encontrados indivíduos em todos os estágios do ciclo de vida, exemplificando o papel do estuário na reprodução e crescimento das espécies. Para espécies estenohalinas (e.g. Notodiaptomus sp. e Thermocyclops minutus), as variações interanuais e sazonais parecem ser mais importantes enquanto as espécies eurihalinas (a maioria das espécies dominantes) tiveram suas densidades controladas pela variabilidade entre as fases de maré. / Copepod community variability among years, seasons and tidal fluctuations at the Mucuri River estuary (Bahia, Brasil) were studied. Zooplankton samples were collected in each season for a period of five years (2002-2006) at three sampling stations; with one of the stations sampled at each tidal cycle (two neap and two flood tides). Temperature, salinity, river flow and rainfall data were obtained. Winter and summer represented the dry and wet seasons, respectively. Copepods abundance ranged from 40 to 63% of the total zooplankton community and was composed of 46 taxa, dominated by common estuarine species such as Temora turbinata, Parvocalanus crassirostris, Acartia lilljeborgi, Oithona hebes, among others). Individuals in all of the life stages were found, exemplifying the role of the estuary in the reproduction and growth of several species. For the stenohaline species (e.g. Notodiaptomus sp. and Thermocyclops minutus), interannual and seasonal variations seems to be more important while for the euryhaline species (the majority of the dominant ones) had their densities controlled by tidal variability.

Alpine zooplankton are exposed to a variety of stressors in their natural environment including ultraviolet radiation. Physiological coping mechanisms such as the accumulation of photoprotective compounds provide these zooplankton protection from many of these stressors. Elevated levels of carotenoid compounds such as astaxanthin have been shown to help zooplankton survive longer when exposed to ultraviolet radiation presumably due to the strong antioxidant properties of carotenoid compounds. This antioxidant capacity is important because it may ameliorate natural and anthropogenic stressor-induced oxidative stress. While previous researchers have shown carotenoid compounds impart increased resistance to ultraviolet radiation in populations of zooplankton, little work has focused on the toxicological implications of PAH induced phototoxicity on zooplankton containing high levels of carotenoid compounds. This thesis discusses research studying the role that carotenoid compounds play in reducing PAH induced phototoxicity. By sampling different lakes at elevations ranging from 9,500' to 12,700' in the front range of the Colorado Rocky Mountains, copepod populations containing different levels of carotenoid compounds were obtained. These populations were then challenged with fluoranthene and ultraviolet radiation. Results discussed include differences in survival and levels of lipid peroxidation among populations exhibiting different levels of carotenoid compounds, and the toxicological and ecological implications of these results.

The bathypelagic copepods Spinocalanus brevicaudatus, Scaphocalanus brevicornis and Heterorhabdus tanneri have established relatively large, permanent breeding populations in Bute and Jervis Inlet, British Columbia. They are found only rarely in the shallower Strait of Georgia. The preference shown by Spinocalanus brevicaudatus and Scaphocalanus brevicornis was attributed to the deep living habits of breeding adults. The reason for H. tanneri's preference of deep water was not apparent from the distribution study. Two general patterns of vertical distribution were seen among the calanoid capepods in the inlets. The common interzonal species such as Calanus glacialis preferred a definite depth interval near mid-water. The deep-living species such as Spinocalanus brevicaudatus were found throughout the water column below the thermocline, in about equal numbers. Maximum numbers usually occurred in the depth interval immediately below the thermocline. Only females of Metridia pacifica showed a strong diurnal migration pattern in July. This migration became less intense near the head of Bute Inlet. The vertical distribution and migration patterns of Spinocalanus brevicaudatus, Scaphocalanus brevicornis and H. tanneri appeared to increase the chances of secual encounters in these relativelyt rare species. The interzonal and deep-living species showed contrasting life-histories. The interzonal species exhibited a well-defined breeding season, with adults maturing in the winter, and young appearing in the spring. The deep-living species did not show a yearly breeding cycle. Females dominated the population at all times of year, and a relatively small percentage of males and females were always present. A reduction in the male:female sex ratio occurred during or after the last moult in Spinocalanus brevicaudatus and Scaphocalanus brevicornis. In the animals the male has reduced mouth parts and probably dies soon after mating. H. tanneri males do not have reduced mouth parts. This species had a sex ratio close to unity at all times. An increase in total copepod numbers was observed with increasing distance from the head of Bute Inlet. An increase in the percentage of juveniles in the population of most species was also observed with increasing distance from the inlet head. Spinccalanus brevicaudctus, Scaphocalanus brevicornis and H. tanneri are redescribed. Comantenna columbiae is described for the first time. / Graduate

No description available.

Studies in the USA have reported that species of meiobenthic copepods can be used as bioindicators of sediment-associated contaminants. The main objective of this research project was to develop and validate methods to assess the effects of estuarine pollution, using the marine benthic copepod Robertsonia propinqua as a bioindicator of environmental health in New Zealand intertidal / estuarine areas. Cultures of R. propinqua were set up and maintained in the laboratory and individuals used in 96h acute and full life-cycle chronic bioassays using the pre-selected contaminants atrazine and zinc sulphate. From the 96h acute experiments it was found that the lethal doses at which 50% mortality occurred (LC50) for exposed nauplii and adult individuals were 7.5 mg/L and 31.8 mg/L, respectively for atrazine and 1.7 mg/L and 2.7 mg/L, respectively for zinc sulphate. This indicated that the nauplii life stage was more sensitive than were the adult life stages for exposure to both contaminants. Based on the 'trigger' values reported (atrazine = 0.013 mg/L, zinc = 0.015 mg/L) in the Australian and New Zealand guidelines for fresh and marine water quality, which provide values at which concentrations of contaminants can occur in the environment before they begin causing effects on aquatic fauna, it is unlikely that the calculated LC50s in the current research will induce biological effects in exposed copepods in the short-term. The calculated LC50 results were then used to further investigate the effects of chronic exposure of sediment-associated contaminants on the complete life-cycle (egg-reproductive adult) of R. propinqua. In a laboratory-based full life-cycle toxicity test, field-collected sediments from polluted sites in the Auckland and Bay of Plenty regions reduced reproductive output (nauplii and copepodite production) of R. propinqua individuals, but the number of males and females, gravid females, clutch size per female and the number of eggs produced were not affected by either the polluted or non-polluted (reference) sediment samples from both field regions. Field investigations of meiofauna community composition in polluted and non-polluted field sites were carried out in 2004 in the Auckland and Bay of Plenty field regions in New Zealand. Greater sediment organic content and a correspondingly deeper redox potential discontinuity layer occurred in all polluted field sites compared with the non-polluted sites. However, species composition could not be used to characterise polluted and non-polluted sites, as there were no dominant taxa which were representative of these sites. The results presented in this thesis indicate that R. propinqua has strong potential to be a good candidate species as a bioindicator of environmental contamination. Furthermore, the full life-cycle toxicity test could be used as a rapid test to detect immediate changes in individual reproduction and development as well as long-term population effects. The technologies developed as part of this research may eventually provide additional tools for commercial environmental consultancies and may compliment existing standard operating procedures for environmental assessments involving pollution of estuarine ecosystems.

Efficient control of sea lice is a major challenge for the sustainable production of farmed Atlantic salmon (Salmo salar (Linnaeus, 1758)). These marine ectoparasites feed on mucus, skin and blood of their hosts, thereby reducing the salmon’s growth rate and overall health. In the northern hemisphere, the most prevalent species is Lepeophtheirus salmonis (Krøyer, 1837). In 2006, global costs of sea lice infections are estimated to have exceeded €300 million, with the majority spent on a limited number of chemical delousing agents. Emamectin benzoate (EMB; SLICE®), an avermectin, has been widely used since its introduction in 2000, due to its convenient administration as an in-feed medication and its high efficacy against all parasitic stages of L. salmonis. However, over-reliance on a single or limited range of medicines favours the emergence of drug resistance and, as a result, the efficacy of this compound in treating L. salmonis has decreased in recent years, as reported from e.g. Chile, Norway, Scotland and Canada. Declining efficacy underlines the need for an improved understanding of the molecular mechanisms underlying EMB drug resistance in L. salmonis. Elucidation of these mechanisms would allow for improved monitoring tools, earlier detection of developing resistance, extended usability of current delousing agents and development of new parasiticides. The work described in this thesis sets out to examine the molecular mechanisms underlying EMB resistance in L. salmonis. In earlier studies, research in nematodes and arthropods has linked drug efflux transporters belonging to the family of ATP-binding cassette (ABC) transporters to ivermectin (IVM) resistance, a parasiticide with high chemical similarity to EMB. ABC transporters such as permeability glycoprotein (P-gp), transport a wide range of substrates, including drugs, and have been suggested to provide a potential molecular mechanism through which EMB resistance might be mediated in sea lice. As an example of such mechanisms, increased expression of P-gp is one of the causative factors for drug resistance in human cancer cells and avermectin resistance in nematode parasites such as Caenorhabditis elegans or Haemonchus contortus. Initial research involved screening for novel salmon lice P-gps that might contribute to EMB resistance. A novel P-gp, SL-PGY1, was discovered using a combined bioinformatic and molecular biological approach. The expression was compared in two well-characterised L. salmonis strains differing in their susceptibility to EMB (S = susceptible, R = resistant). Prior to EMB exposure, mRNA levels did not differ from each other, while, after 24 h exposure, a 2.9-fold increase in SL-PGY1 mRNA expression was observed in the R strain. SL-PGY1 appears not to be a major factor contributing to reduced EMB susceptibility, although it could play a role, as expression levels increased upon exposure to EMB. A further four additional drug transporters (ABC C subfamily) were also discovered showing high homology to multidrug-resistance proteins (MRP). The relative expression levels of each MRP was compared in the strains S and R, before and after exposure to EMB. No significant changes were found in their expression patterns. If ABC drug transporters mediate the efflux of EMB and thereby reduce the intracellular concentrations of the drug in exposed animals, the inhibition of those ABC drug transporters was expected to lead to higher intracellular levels of EMB. This could result in an enhanced toxic effect when EMB is co-administered with an inhibitor. Two known inhibitors of human P-gps and MRPs, cyclosporin A (CSA) and verapamil (VER), were co-administered with EMB. CSA increased the toxic effect of EMB in both tested strains, implying that the targets of CSA are expressed at comparable levels and that they may be part of the mechanism conferring EMB resistance. VER increased the toxic effect of EMB in the R strain, but had no significant effects on the S strain. This implies that the expression of factors inhibited by VER differs between the two L. salmonis strains. It is hypothesised that a number of ABC transporters with distinct, yet overlapping patterns of inhibitor specificity are affected by those inhibitors. The search for drug-resistance conferring genes was complemented with a systematic, genome-wide survey of ABC transporters in L. salmonis to find additional members of this important gene family. Next-generation high-throughput RNA sequencing (RNA-seq) was employed to assemble a reference transcriptome from pooled total RNA of salmon lice at different development stages. The transcriptome was assembled against the L. salmonis genome and annotated. Thirty-nine putative ABC transporters were found. Of further interest were transcripts of the subfamily B, C and G, as they contain drug-transporting ABC proteins. For the ABC B subfamily, one full (SL-PGY1) and three half transporter transcripts were found. Only full transporters are known to transport drugs and SL-PGY1 is apparently not a major factor contributing to EMB resistance. Fourteen ABCC sequences were found – 11 MRPs and 3 homologues to sulfonylurea receptors. Of interest are MRPs, as they contribute to drug detoxification in humans and invertebrates. Four MRPs had been identified previously and their expression ratios did not differ between S and R strain parasites. Seven sequences belonging to ABCG subfamily were found. However, none of the L. salmonis ABCG transcripts identified showed sufficient homology to known drug transporters in other species. With the currently limited understanding of the mechanisms conferring EMB resistance, monitoring the susceptibility of L. salmonis subpopulations is essential. Dose-response bioassays are currently widely used. Tests with pre-adult II or adult parasites requires relatively large numbers of parasites (~150) to conduct this type of bioassay, which may not always be available. Addressing this issue, we tested the feasibility of a single-dose bioassay (requiring fewer test animals than dose-response bioassays) to discriminate between L. salmonis strains with differing EMB susceptibility. This alternative approach uses time-course toxicity analysis, where the toxic effect of EMB is monitored over time. After clearly defining the effect criteria, we found that it is possible to discriminate between those L. salmonis strains. However, while requiring fewer test animals, time course toxicity analysis is more labour-intensive, but the alternative design can be suitable under certain circumstances. The work reported here has provided new knowledge concerning the mechanisms of EMB resistance in sea lice. Several novel putative drug transporters have been identified, an important first step toward unravelling the complex interactions of genes involved in EMB resistance in this commercially important parasite.

Florações de microalgas potencialmente nocivas têm aumentado em termos globais e causado impactos na aquicultura, no turismo, na saúde humana e em vários aspectos do funcionamento dos ecossistemas. No Brasil, uma atenção cada vez maior tem sido dada ao tema, em virtude do elevado potencial de nossas águas para o cultivo de bivalves marinhos, um dos grupos de invertebrados mais afetados. Deste modo, a preocupação com a contaminação de consumidores humanos tem gerado projetos voltados para a detecção de espécies potencialmente nocivas e de suas toxinas, mas ainda há poucos estudos sobre interações alimentares entre as espécies de fitoplâncton e zooplâncton. No presente trabalho interações entre dinoflagelados potencialmente nocivos e organismos pertencentes ao zooplâncton marinho foram investigadas em dois capítulos. Capítulo 1: O presente estudo tem como objetivo avaliar a influência do dinoflagelado potencialmente nocivo Alexandrium tamiyavanichii na alimentação e reprodução do copépode planctônico marinho Temora turbinata. Taxas de produção de ovos e sucesso de eclosão naupliar foram estimadas para fêmeas alimentadas em misturas de A. tamiyavanichii e do dinoflagelado Prorocentrum minimum, tratado aqui como alimento controle. Capítulo 2: O principal objetivo deste estudo foi analisar os efeitos de exsudatos de dinoflagelados e células intactas na sobrevivência e mobilidade de táxons zooplanctônicos de uma região subtropical (Ubatuba, Brasil). Efeitos letais foram observados em cinco dos seis táxons testados, três dos quais (náuplios de copépodes, tintinídeos e larvas de gastrópodes) quando expostos a exsudatos e dois (rotíferos e larvas de braquiúros) quando expostos a células intactas. Em adição, larvas de gastrópodes demonstraram comprometimento da mobilidade após exposição à exsudatos. Apenas larvas de poliquetas não foram aparentemente afetadas no curso dos experimentos. / Harmful algae blooms have increased globally and caused impacts in aquaculture, tourism, and human health and in various aspects of ecosystem functioning. In Brazil, increasing attention has been given to this issue, because of the high potential of our waters for marine bivalve farming. Therefore, there are risks of contamination of the crops, and consequent poisoning of the consumers. This concern has led research projects to mostly focus on the detection of potentially harmful species and their toxins, with few initiatives to understand feeding interactions among species of phytoplankton and zooplankton. In this research interactions between potentially harmful dinoflagellates and marine zooplankton were investigated in two chapters. Chapter 1 - This study aims to evaluate the influence of the potentially harmful dinoflagellate Alexandrium tamiyavanichii on Temora turbinata feeding and reproduction. Egg production rates and hatching success were estimated for females fed on mixtures of A. tamiyavanichii and P. minimum. Chapter 2: The aim of this study was to analyze the effects of dinoflagellate exudates and intact cells on the survivorship and mobility of zooplankton taxa from a subtropical location (Ubatuba, Brazil). Lethal effects were observed in five out of six taxa investigated, three of which (copepod nauplii, tintinnids and gastropod larvae) when exposed to dinoflagellate exudates and two (rotifers and brachyuran zoeae) when exposed to intact cells. In addition, gastropod larvae displayed mobility impairment during exposure to dinoflagellate exudates. Only polychaete larvae were not apparently affected during the course of the experiments.

Florações de microalgas potencialmente nocivas têm aumentado em termos globais e causado impactos na aquicultura, no turismo, na saúde humana e em vários aspectos do funcionamento dos ecossistemas. No Brasil, uma atenção cada vez maior tem sido dada ao tema, em virtude do elevado potencial de nossas águas para o cultivo de bivalves marinhos, um dos grupos de invertebrados mais afetados. Deste modo, a preocupação com a contaminação de consumidores humanos tem gerado projetos voltados para a detecção de espécies potencialmente nocivas e de suas toxinas, mas ainda há poucos estudos sobre interações alimentares entre as espécies de fitoplâncton e zooplâncton. No presente trabalho interações entre dinoflagelados potencialmente nocivos e organismos pertencentes ao zooplâncton marinho foram investigadas em dois capítulos. Capítulo 1: O presente estudo tem como objetivo avaliar a influência do dinoflagelado potencialmente nocivo Alexandrium tamiyavanichii na alimentação e reprodução do copépode planctônico marinho Temora turbinata. Taxas de produção de ovos e sucesso de eclosão naupliar foram estimadas para fêmeas alimentadas em misturas de A. tamiyavanichii e do dinoflagelado Prorocentrum minimum, tratado aqui como alimento controle. Capítulo 2: O principal objetivo deste estudo foi analisar os efeitos de exsudatos de dinoflagelados e células intactas na sobrevivência e mobilidade de táxons zooplanctônicos de uma região subtropical (Ubatuba, Brasil). Efeitos letais foram observados em cinco dos seis táxons testados, três dos quais (náuplios de copépodes, tintinídeos e larvas de gastrópodes) quando expostos a exsudatos e dois (rotíferos e larvas de braquiúros) quando expostos a células intactas. Em adição, larvas de gastrópodes demonstraram comprometimento da mobilidade após exposição à exsudatos. Apenas larvas de poliquetas não foram aparentemente afetadas no curso dos experimentos. / Harmful algae blooms have increased globally and caused impacts in aquaculture, tourism, and human health and in various aspects of ecosystem functioning. In Brazil, increasing attention has been given to this issue, because of the high potential of our waters for marine bivalve farming. Therefore, there are risks of contamination of the crops, and consequent poisoning of the consumers. This concern has led research projects to mostly focus on the detection of potentially harmful species and their toxins, with few initiatives to understand feeding interactions among species of phytoplankton and zooplankton. In this research interactions between potentially harmful dinoflagellates and marine zooplankton were investigated in two chapters. Chapter 1 - This study aims to evaluate the influence of the potentially harmful dinoflagellate Alexandrium tamiyavanichii on Temora turbinata feeding and reproduction. Egg production rates and hatching success were estimated for females fed on mixtures of A. tamiyavanichii and P. minimum. Chapter 2: The aim of this study was to analyze the effects of dinoflagellate exudates and intact cells on the survivorship and mobility of zooplankton taxa from a subtropical location (Ubatuba, Brazil). Lethal effects were observed in five out of six taxa investigated, three of which (copepod nauplii, tintinnids and gastropod larvae) when exposed to dinoflagellate exudates and two (rotifers and brachyuran zoeae) when exposed to intact cells. In addition, gastropod larvae displayed mobility impairment during exposure to dinoflagellate exudates. Only polychaete larvae were not apparently affected during the course of the experiments.

Brominated flame retardants (BFRs) are chemicals used in e.g. electronic equipment, textiles and plastics for the prevention of fire. Over recent decades, concern has been raised regarding some heavily used BFRs, since the levels in the environment have been increasing. In the present thesis, persistent, bioaccumulative, and toxic (PBT) properties were studied for a structurally varied set of BFRs selected to represent more than 60 organic BFRs. The studied BFRs include: 2,4,4'-tribromodiphenyl ether (BDE 28), 2,2',3,4,4',5',6-heptabromodiphenyl ether (BDE  183), decabromodiphenyl ether (BDE 209), hexabromocyclododecane (HBCD), tetrabromobisphenol A (TBBPA), tetrabromobisphenol A 2-hydroxyethyl ether (TBBPA OHEE), 2,4,6-tribromophenol (246BrPh), 1,2-dibromo-4-(1,2-dibromoethyl)cyclohexane (TBECH), and hexabromobenzene (HxBrBz). It is likely that soil will act as a sink for BFRs. Therefore, studies of BFRs were performed on persistence in soil, and on bioaccumulation from soil in the earthworm Eisenia fetida. Large variation in the biodegradability in soil among the tested BFRs was observed. The studied brominated diphenyl ethers (BDE 28 and BDE 209) were very persistent under both aerobic and anaerobic conditions, while 246BrPh and TBECH degraded quickly in both aerobic and anaerobic soil. The bioaccumulation in earthworm from soil was high for HxBrBz, TBECH and for tested brominated diphenyl ethers with 4-6 bromine atoms (BDE 47, BDE 99, and BDE 153). Bioaccumulation was also studied in zebrafish after dietary exposure to a mixture of BFRs. It was shown that several metabolites were formed and retained in zebrafish, which highlights the importance of also searching for and identifying persistent degradation products. Maternal transfer was shown for all BFRs present in the female zebrafish. This shows that zebrafish young (fry) are exposed to these BFRs at approximately the same concentrations as female zebrafish during the early-life stages, when fish are usually most sensitive to organic contaminants. Toxicity of individual BFRs and a BFR mixture was studied in Nitocra spinipes using a silica gel-based system. Highest toxicities were observed for BDE 28, TBBPA, and TBBPA OHEE. In the mixture toxicity study, simultaneous exposure to low concentrations (individually causing no significant effect) of six BFRs significantly affected the survival of Nitocra spinipes. The results from the PBT studies presented in the thesis and literature data were compared with the criteria for PBT classification, as set in the European REACH legislation. Further, some BFRs with physico-chemical properties similar to those of identified PBTs were suggested to be prioritized for future PBT testing.