Bee declines have been reported globally and habitat loss and degradation due to urbanization and agricultural intensification are two of the primary drivers. Native bees play a critical role in plant reproduction, and declines in abundance and diversity of bees are expected to impact flowering plant biodiversity and productivity of insect pollinated agricultural crops. Habitat restoration can help mitigate declines by increasing the amount and quality of available bee habitat. However, outside of agroecosystems bees are rarely specified in restoration targets and little is known about how they respond to habitat restoration. My thesis addresses this knowledge gap by: (1) documenting the structure and function of the native bee community at a restored wet meadow to establish a baseline for future monitoring activities, (2) comparing the influence of two restoration approaches on the established bee community, and (3) exploring changes in functional groups and pollination function with time since restoration. I sampled bees at degraded, restored, and (semi)natural habitats at 12 sites in four locations in southern Ontario. I used a combination of structural (abundance, richness, and evenness) and functional (guilds based on social and nesting habits and plant-pollinator interaction networks) characteristics to describe and compare bee communities. I collected a total of 10,446 bees from 30 genera and six families representing a range of phenologies, social behaviours, and nesting habits. At Dunnville Marsh, a restored wet meadow, I collected 5,010 bee specimens from 27 genera and six families. The bee community at Dunnville Marsh was diverse and well connected within 4-6 years of restoration, emphasizing the importance of wet meadows as native bee habitat. However, wood nesters and cleptoparasites were relatively uncommon suggesting that the community may be less stable compared to older habitats. Between 2005 and 2008, individual fields at Dunnville Marsh were dug with pits and mounds before planting and seeding or were seeded into weedy ground. Digging pits and mounds did not convey a clear advantage to the establishing bee community, but genus richness was greater in pit and mound sites (p=0.04). As well, the restoration approach used influenced the relative representation of guilds within the community. Ground nesters and wood nesters were significantly more abundant in pit and mound treated sites (p<0.001), perhaps reflecting the larger amounts of bare ground (p<0.001) and the greater potential for sapling survival on mound tops. Stem nesters were more abundant in planted sites (p<0.001), and floral richness and abundance did not differ between the two restoration approaches. Finally, diversity and evenness of guilds based on social and nesting habits increased with age since restoration, indicating that communities in (semi)natural habitats are more functionally diverse than those in restored habitats, but that communities in restored habitats are more functionally diverse than those in degraded habitats. Relative abundance of guilds changed with age since restoration in ways that reflected structural habitat changes associated with succession. Degraded sites had the highest relative abundance of ground nesters, while (semi)natural sites had the highest relative abundance of wood nesters. Plant-pollinator interaction networks did not demonstrate clear trends with respect to age since restoration, but indicated that communities that establish in response to non-targeted restorations can be diverse, robust to extinction, and well connected.

Bee declines have been reported globally and habitat loss and degradation due to urbanization and agricultural intensification are two of the primary drivers. Native bees play a critical role in plant reproduction, and declines in abundance and diversity of bees are expected to impact flowering plant biodiversity and productivity of insect pollinated agricultural crops. Habitat restoration can help mitigate declines by increasing the amount and quality of available bee habitat. However, outside of agroecosystems bees are rarely specified in restoration targets and little is known about how they respond to habitat restoration. My thesis addresses this knowledge gap by: (1) documenting the structure and function of the native bee community at a restored wet meadow to establish a baseline for future monitoring activities, (2) comparing the influence of two restoration approaches on the established bee community, and (3) exploring changes in functional groups and pollination function with time since restoration. I sampled bees at degraded, restored, and (semi)natural habitats at 12 sites in four locations in southern Ontario. I used a combination of structural (abundance, richness, and evenness) and functional (guilds based on social and nesting habits and plant-pollinator interaction networks) characteristics to describe and compare bee communities. I collected a total of 10,446 bees from 30 genera and six families representing a range of phenologies, social behaviours, and nesting habits. At Dunnville Marsh, a restored wet meadow, I collected 5,010 bee specimens from 27 genera and six families. The bee community at Dunnville Marsh was diverse and well connected within 4-6 years of restoration, emphasizing the importance of wet meadows as native bee habitat. However, wood nesters and cleptoparasites were relatively uncommon suggesting that the community may be less stable compared to older habitats. Between 2005 and 2008, individual fields at Dunnville Marsh were dug with pits and mounds before planting and seeding or were seeded into weedy ground. Digging pits and mounds did not convey a clear advantage to the establishing bee community, but genus richness was greater in pit and mound sites (p=0.04). As well, the restoration approach used influenced the relative representation of guilds within the community. Ground nesters and wood nesters were significantly more abundant in pit and mound treated sites (p<0.001), perhaps reflecting the larger amounts of bare ground (p<0.001) and the greater potential for sapling survival on mound tops. Stem nesters were more abundant in planted sites (p<0.001), and floral richness and abundance did not differ between the two restoration approaches. Finally, diversity and evenness of guilds based on social and nesting habits increased with age since restoration, indicating that communities in (semi)natural habitats are more functionally diverse than those in restored habitats, but that communities in restored habitats are more functionally diverse than those in degraded habitats. Relative abundance of guilds changed with age since restoration in ways that reflected structural habitat changes associated with succession. Degraded sites had the highest relative abundance of ground nesters, while (semi)natural sites had the highest relative abundance of wood nesters. Plant-pollinator interaction networks did not demonstrate clear trends with respect to age since restoration, but indicated that communities that establish in response to non-targeted restorations can be diverse, robust to extinction, and well connected.

Human activities and expansion have created novel disturbance patterns across Earth’s landscapes. Disturbance is an ecological interruption after which ecosystem recovery or transition into a new state can occur, affecting biodiversity, ecosystem functioning, and theavailability of ecosystem services. Fire and herbivory are two of the most widespread forces of disturbance which shape ecosystems globally. In temperate forest ecosystems, fire affects forest composition, which influences the diversity and resilience of ecosystems (chapters 1 and 2) and forest canopy structure, which is important to snowpack accumulation and the availability of water resources (chapters 3 and 4). In chapter one, the effects of conifer competition, which occurs under fire suppression, and ungulate herbivory on aspen regeneration and recruitmentwere examined. It was found that conifer competition, and ungulate herbivory both drastically reduced successful aspen regeneration and recruitment and had a larger effect than climatic or topographical variables. In chapter two, this understanding was used to investigate mechanicaland fire interventions by the National Forest Service in a mixed aspen conifer forest experiencing fire suppression and heavy ungulate herbivory. Untreated forests failed to recruit aspen suckers successfully due to conifer competition and ungulate browsing. Fire treatments were successful in restoring aspen habitat, but mechanical treatments failed due to heavy ungulate use, despitethe treatment eliciting high sucker densities. In chapter three, fire severity was found to have important implications for snowpack accumulation and snow-water content in alpine forests. High burn severity, which is projected to become more common under future climaticconditions, led to deeper and denser snowpack possibly buffering the effects of water loss in a warmer climate. In chapter four, the interaction between topography and vegetation in burned forest conditions was evaluated. It was found that topographical aspect likely mediates the effect of vegetation on snowpack and may have an opposite effect on snow accumulation and melt on north vs south facing aspects. A synthesis of studies from different regions further supports the idea that this relationship between fire and snow is heavily dependent on latitude, elevation, and slope angle. Together, these findings demonstrate that the resilience and persistence of aspenforest ecosystems in changing disturbance regimes depend on complex interactions among disturbance type, disturbance severity, landscape position, and hydrology. These interactions should be integrated into management strategies to protect ecosystems and ensure ecosystemservices for growing human populations in the western United States.

Surface mining in the central Appalachian coalfield disturbs landscapes. Post-mining reforestation efforts now achieve successful reestablishment and growth; however, it is unclear whether reforestation efforts also restore the native forest ecosystem functions. We quantified rates of return of key ecosystem functions and structural attributes of the post-mining forested ecosystem. A chronosequence of four reforested mine sites and an unmined reference stand were studied in southwestern Virginia. Total soil nitrogen (N) and component (mineral soil, forest floor, root, and aboveground biomass) ecosystem carbon (C) pools were quantified. Throughout the growing season, soil gas fluxes [i.e., carbon dioxide (CO2), nitrous oxide (N2O) and methane (CH4)], soil inorganic-N [nitrate (NO3-) and ammonium (NH4+)], and total and active microbial biomass were measured. Soil organic C (SOC) and total ecosystem C are returning to the mined landscape. Ecosystem C was correlated with N (r= 0.80; p= 0.0003) and with total and active microbial biomass (r= 0.92; p=<.0001 and r= 0.86; p=<.0001). Available soil inorganic-N and CO2 and N2O fluxes showed no significant differences among study sites; however, the reforested mine soils showed a diminished capacity for CH4 uptake. Although some ecosystem components and functions rapidly returned to the mined landscape, others did not. Our results indicate that reforestation on surface mined lands is largely successful at restoring many ecosystem functions, yet certain functions are decoupled from the redeveloping ecosystem structure. Improved understanding of relationships between ecosystem functions and structural measures in this context can aid development of ecosystem restoration science and mine reclamation practice. / Master of Science

L’objectif de cette thèse est de proposer une caractérisation du bien propre des touts écologiques, comme les communautés biotiques et les écosystèmes, dont peut être dérivée une notion de ce qui est bon pour eux. Ceci vise à défendre les deux principales approches holistes en éthique de l’environnement, c’est-à-dire l’approche pragmatiste défendue par Bryan G. Norton et l’approche écocentriste défendue par J. Baird Callicott, contre certaines objections ayant été soulevées contre elles, faisant valoir l’impossibilité pour les écosystèmes d’avoir un bien propre. Cette thèse répond à ces objections en mobilisant plusieurs ressources théoriques issues de la philosophie de la biologie et de la méta-éthique. Ces ressources sont notamment celles fournies par les discussions sur les notions de fonction et de santé en philosophie de la biologie, celles fournies par les conceptions néo-aristotéliciennes de la normativité en méta-éthique, et celles offertes par les discussions de philosophie de l’écologie sur le holisme et le réductionnisme, sur l’idée d’équilibre de la nature, et sur le concept de santé écosystémique. Cette thèse mobilise ces ressources afin d’élaborer les fondements philosophiques des notions de fonction écologique et de santé écosystémique, desquelles est dérivée une caractérisation du bien propre des écosystèmes. / The goal of this dissertation is to defend the view that ecological wholes, such as biotic communities and ecosystems, have a good of their own, from which an idea of what is good for them can be derived. This aims to respond to the common criticism addressed to the two main holistic approaches to environmental ethics, namely Bryan G. Norton’s pragmatist approach and John Baird Callicott’s ecocentrist approach, which argues that biotic communities and ecosystems have no such good. This dissertation addresses those objections by mobilizing theoretical resources taken from the philosophy of biology and metaethics. In particular, those theoretical resources come from studies about the notions of function and health in the philosophy of biology, from neo-aristotelian accounts of normativity in metaethics, and from discussions in the philosophy of ecology on holism and reductionism, the balance of nature idea, and the concept of ecosystem health. Those resources are mobilized to elaborate some philosophical foundations for the notions of ecological function and ecosystem health, from which an account of the good of ecosystems is derived.

Made available in DSpace on 2016-04-26T20:21:34Z (GMT). No. of bitstreams: 1 Juliana Muniz Pacheco.pdf: 1948610 bytes, checksum: 12b83db365af0dcbe9c3f04b3e6e9496 (MD5) Previous issue date: 2013-04-19 / The present research was based in discussions which took place when Forestry Code of 1965 took force, a time when the thesis of permanent preservation areas in cities was not anywhere peaceful. Within this background, it was pursued the historic institute source of this environmentally sensitive areas, as well as its fundamental (or ratio legis), nowadays denominated environmental or ecological function. Using such concepts as base ground (delataria ground), the study has progressed towards Urban Planning Law and its relationship with environmental regulation, an updated discussion with needed confrontation before the persistent thesis of excluding one legal order in place of another. For this purpose, it was addressed the constitutional competences array (delataria array) and the sustainable development principle. From the urban planning perspective, it was prioritized focus in Housing Ownership and its regularization, most sensitive point regarding harm to ecologically balanced environment and demand generator towards human being dignity. During the research development, Law nº 12.651, from 25th May, 2012 stood out, with its subsequent modification, reflecting in the premises, guidelines and final conclusions of the present dissertation, in a way that housing regularization achieved a new approach both for the law and research followed. In this way, one may conclude that the Public Power, in the role of managing a balanced environment, won more adequate procedures to achieve Housing Ownership, through landing regularization and not only environmental balance but life quality, security and health of the involved population / A presente pesquisa se baseou nas principais discussões havidas na vigência do Código Florestal de 1965, época em que não era nada pacífica a tese de existência das áreas de preservação permanente nas cidades. Com este pano de fundo, buscou a origem histórica do instituto dessas áreas ambientalmente sensíveis, bem como seu fundamento (ou ratio legis), hoje denominada função ambiental ou ecológica. Utilizando tais conceitos como base, progrediu-se em direção ao Direito Urbanístico e sua relação com as normas ambientais, discussão bastante atual e de necessário enfrentamento ante a persistente tese de exclusão de uma ordem jurídica em prol da outra. Para tanto, visitaram-se o rol de competências constitucionais e o princípio do desenvolvimento sustentável. Sob o aspecto urbanístico, priorizou-se o foco no Direito à Moradia e à sua regularização, ponto mais sensível no que tange à lesão ao meio ambiente ecologicamente equilibrado e gerador de demandas em prol da dignidade da pessoa humana. Durante o desenvolvimento das pesquisas, sobreveio a Lei nº 12.651, de 25 de maio de 2012, com suas posteriores alterações, o que refletiu nas premissas, diretrizes e conclusões finais da presente dissertação, de modo que a regularização da moradia ganhou nova abordagem tanto da lei, quanto das pesquisas levadas a cabo. Com isso, conclui-se que o Poder Público, na qualidade de gestor do meio ambiente equilibrado, ganhou procedimentos mais adequados para concretizar o Direito à Moradia, através da regularização fundiária e da manutenção não só do equilíbrio ambiental, mas também do direito à vida, à segurança e à saúde da população envolvida

Content removed from thesis due to copyright restrictions: Seabrook-Davison, M. N. H., Weihong, J. J. & Brunton, D. H. (2010). "Survey of New Zealand Department of Conservation staff involved in the management and recovery of threatened species." Biological Conservation, 143: 212-219. doi: 10.1016/j.biocon.2009.10.005. Seabrook-Davison, M. N. H., Ji, W. & Brunton, D. H. (in press). "New Zealand lacks comprehensive threatened species legislation -- comparison with legislation in Australia and the USA." Pacific Conservation Biology, 16. / It is only recently that New Zealand wildlife managers have become aware of both the taxonomic range of New Zealand’ indigenous biodiversity and the number of species threatened with extinction. The entire New Zealand archipelago has been described as a biodiversity hotspot; a term with both negative and positive connotations as although its biodiversity is unique and diverse, it has lost three quarters of its primary vegetation and much of its remaining endemic biota is in decline. This thesis evaluated aspects of New Zealand’s approach to the management of biodiversity with an emphasis on methods used in the recovery of threatened species. Possible solutions are presented that New Zealand could investigate to improve the delivery of species recovery. A survey was conducted amongst Department of Conservation (DOC) staff to investigate management tools available to them. Results suggest that inadequate resources, staff shortages and an overwhelming workload have resulted in a failure to achieve comprehensive recovery of threatened species. A review of New Zealand wildlife conservation legislation and a comparison with the USA Endangered Species Act 1973 and Australian Environment Protection and Biodiversity Conservation Act 1999, suggests that a lack of dedicated threatened species legislation is hindering the effective recovery of New Zealand’s threatened species. The thesis concludes that New Zealand has the advantage of a large conservation estate but lacks an integrated national management approach to the conservation of its biodiversity. Considerable improvement of the management and recovery of threatened species can be achieved with the enacting of dedicated threatened species legislation. Keywords: Threatened species, biodiversity, biodiversity hotspot, conservation, management, recovery plans, recovery groups, Department of Conservation, legislation, threat classification system, listing, ecological function, ecosystem services, staff survey, New Zealand

Content removed from thesis due to copyright restrictions: Seabrook-Davison, M. N. H., Weihong, J. J. & Brunton, D. H. (2010). "Survey of New Zealand Department of Conservation staff involved in the management and recovery of threatened species." Biological Conservation, 143: 212-219. doi: 10.1016/j.biocon.2009.10.005. Seabrook-Davison, M. N. H., Ji, W. & Brunton, D. H. (in press). "New Zealand lacks comprehensive threatened species legislation -- comparison with legislation in Australia and the USA." Pacific Conservation Biology, 16. / It is only recently that New Zealand wildlife managers have become aware of both the taxonomic range of New Zealand’ indigenous biodiversity and the number of species threatened with extinction. The entire New Zealand archipelago has been described as a biodiversity hotspot; a term with both negative and positive connotations as although its biodiversity is unique and diverse, it has lost three quarters of its primary vegetation and much of its remaining endemic biota is in decline. This thesis evaluated aspects of New Zealand’s approach to the management of biodiversity with an emphasis on methods used in the recovery of threatened species. Possible solutions are presented that New Zealand could investigate to improve the delivery of species recovery. A survey was conducted amongst Department of Conservation (DOC) staff to investigate management tools available to them. Results suggest that inadequate resources, staff shortages and an overwhelming workload have resulted in a failure to achieve comprehensive recovery of threatened species. A review of New Zealand wildlife conservation legislation and a comparison with the USA Endangered Species Act 1973 and Australian Environment Protection and Biodiversity Conservation Act 1999, suggests that a lack of dedicated threatened species legislation is hindering the effective recovery of New Zealand’s threatened species. The thesis concludes that New Zealand has the advantage of a large conservation estate but lacks an integrated national management approach to the conservation of its biodiversity. Considerable improvement of the management and recovery of threatened species can be achieved with the enacting of dedicated threatened species legislation. Keywords: Threatened species, biodiversity, biodiversity hotspot, conservation, management, recovery plans, recovery groups, Department of Conservation, legislation, threat classification system, listing, ecological function, ecosystem services, staff survey, New Zealand

Content removed from thesis due to copyright restrictions: Seabrook-Davison, M. N. H., Weihong, J. J. & Brunton, D. H. (2010). "Survey of New Zealand Department of Conservation staff involved in the management and recovery of threatened species." Biological Conservation, 143: 212-219. doi: 10.1016/j.biocon.2009.10.005. Seabrook-Davison, M. N. H., Ji, W. & Brunton, D. H. (in press). "New Zealand lacks comprehensive threatened species legislation -- comparison with legislation in Australia and the USA." Pacific Conservation Biology, 16. / It is only recently that New Zealand wildlife managers have become aware of both the taxonomic range of New Zealand’ indigenous biodiversity and the number of species threatened with extinction. The entire New Zealand archipelago has been described as a biodiversity hotspot; a term with both negative and positive connotations as although its biodiversity is unique and diverse, it has lost three quarters of its primary vegetation and much of its remaining endemic biota is in decline. This thesis evaluated aspects of New Zealand’s approach to the management of biodiversity with an emphasis on methods used in the recovery of threatened species. Possible solutions are presented that New Zealand could investigate to improve the delivery of species recovery. A survey was conducted amongst Department of Conservation (DOC) staff to investigate management tools available to them. Results suggest that inadequate resources, staff shortages and an overwhelming workload have resulted in a failure to achieve comprehensive recovery of threatened species. A review of New Zealand wildlife conservation legislation and a comparison with the USA Endangered Species Act 1973 and Australian Environment Protection and Biodiversity Conservation Act 1999, suggests that a lack of dedicated threatened species legislation is hindering the effective recovery of New Zealand’s threatened species. The thesis concludes that New Zealand has the advantage of a large conservation estate but lacks an integrated national management approach to the conservation of its biodiversity. Considerable improvement of the management and recovery of threatened species can be achieved with the enacting of dedicated threatened species legislation. Keywords: Threatened species, biodiversity, biodiversity hotspot, conservation, management, recovery plans, recovery groups, Department of Conservation, legislation, threat classification system, listing, ecological function, ecosystem services, staff survey, New Zealand

Climate change is expected to increase the precipitation ~30% in higher latitudes during the next century, increasing the land runoff via rivers to aquatic ecosystems. The Baltic Sea will receive higher river discharges, accompanied by larger input of allochthonous dissolved organic matter (DOM) from terrestrial ecosystems. The salinity will decrease due to freshwater dilution. The allochthonous DOM constitute a potential growth substrate for microscopic bacterioplankton and phytoplankton, which together make up the basal trophic level in the sea. The aim of my thesis is to elucidate the bacterial processing of allochthonous DOM and to evaluate possible consequences of increased runoff on the basal level of the food web in the Baltic Sea. I performed field studies, microcosm experiments and a theoretical modeling study. Results from the field studies showed that allochthonous DOM input via river load promotes the heterotrophic bacterial production and influences the bacterial community composition in the northern Baltic Sea. In a northerly estuary ~60% of bacterial production was estimated to be sustained by terrestrial sources, and allochthonous DOM was a strong structuring factor for the bacterial community composition. Network analysis showed that during spring the diversity and the interactions between the bacteria were relatively low, while later during summer other environmental factors regulate the community, allowing a higher diversity and more interactions between different bacterial groups. The influence of the river inflow on the bacterial community allowed “generalists” bacteria to be more abundant than “specialists” bacteria.    Results from a transplantation experiment, where bacteria were transplanted from the northern Baltic Sea to the seawater from the southern Baltic Sea and vice versa, showed that salinity, as well as the DOM composition affect the bacterial community composition and their enzymatic activity. The results showed that α-proteobacteria in general were favoured by high salinity, β-proteobacteria by low salinity and terrestrial DOM compounds and γ-proteobacteria by the enclosure itself. However, effects on the community composition and enzymatic activity were not consistent when the bacterial community was retransplanted, indicating a functional redundancy of the bacterial communities.  Results of ecosystem modeling showed that climate change is likely to have quite different effect on the north and the south of the Baltic Sea. In the south, higher temperature and internal nutrient load will increase the cyanobacterial blooms and expand the anoxic or suboxic areas. In the north, climate induced increase in riverine inputs of allochthonous DOM is likely to promote bacterioplankton production, while phytoplankton primary production will be hampered due to increased light attenuation in the water. This, in turn, can decrease the production at higher trophic levels, since bacteria-based food webs in general are less efficient than food webs based on phytoplankton. However, complex environmental influences on the bacterial community structure and the large redundancy of metabolic functions limit the possibility of predicting how the bacterial community composition will change under climate change disturbances.