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<p>I have put my half title as the main thesis title here. I would like to use that as the title displayed online.</p> / <p>The Drosophila heart arises from two bilateral rows of cardioblasts (CB) that migratedorsally towards the midline and contact their contralateral partners to form the dorsal vessel.Generally, migrating cells rely on the extensions at the leading edge domain. Like other migratingcells, we show that the leading edge of the CBs extends finger-like processes which might play arole in sensing guidance cues during guided migration. Expressing an mCherry-Moesin transgenein the CBs enabled us to characterise the dynamic nature and genetic requirements of thesefilopodial processes. While studying the role of filopodial activity during heart assembly weobserved that CBs extended cellular protrusions towards the internalizing amnioserosa cells.Filopodial activity is low during migration, and rises when the CBs are near the amnioserosacells. However, filopodial contacts are stabilized by interaction with contralateral CBs, not theamnioserosa cells. CB cell bodies can contact their contra lateral partners only after theamnioserosa is fully internalized. We propose that filopodia are generated in response to thepresence of sensory guidance molecules excreted by the amnioserosa cells.Robo/Slit signalling has been previously shown to play a role in CB migration, adhesionand lumen formation. Additionally, studies have shown that Robo/Slit signalling plays a role infilopodial extension in the Drosophila nervous system development. We observed that in embryosin which Robo signaling in the CBs was reduced or absent, the CBs were less active at the LE. Inaddition, the migration speed of CBs in mutant embryos was notably decreased. Based on theseresults, we hypothesize that Robo/Slit signaling plays a role in filopodial extensions.</p> / Master of Science (MSc)

no / Skin pigmentation is a multistep process of melanin synthesis by melanocytes, its transfer to recipient keratinocytes and its degradation. As dyspigmentation is a prominent marker of skin ageing, novel effective agents that modulate pigmentation safely are being sought for both clinical and cosmetic use. Here, a number of plant extracts were examined for their effect on melanogenesis (by melanin assay and Western blotting) and melanin transfer (by confocal immunomicroscopy of gp100-positive melanin granules in cocultures and by SEM analysis of filopodia), in human melanocytes and in cocultures with phototype-matched normal adult epidermal keratinocytes. Mulberry, Kiwi and Sophora extracts were assessed against isobutylmethylxanthine, hydroquinone, vitamin C and niacinamide. Compared with unstimulated control, all extracts significantly reduced melanogenesis in human melanoma cells and normal adult epidermal melanocytes. These extracts also reduced melanin transfer and reduced filopodia expression on melanocytes, similar to hydroquinone and niacinamide, indicating their effectiveness as multimode pigmentation actives.

Regulation of the actin cytoskeleton is key to cellular function and underlies processes including cell migration, mitosis and endocytosis. Motile cells send out dynamic actin protrusions that enable them to sense and interact with their environment, as well as generating physical forces. Linking of the actin cytoskeleton to the cell membrane is essential for the formation of these protrusions. The proteins that are thought to fulfil such a role have a membrane interacting domain (such as the PH domain in lamellipodin, or I-BAR protein in IRSp53) and a domain which interacts with actin regulatory proteins (such as the SH3 domain of IRSp53, which binds Ena and VASP). I investigated the contribution of the F-BAR protein Toca-1 in linking actin polymerisation to membranes, by characterising a new protein-protein interaction and the interaction of Toca-1 with giant unilamellar vesicles. FBP17, a homologue of Toca-1, can oligomerise to form 2D flat lattices and 3D tubules on membranes. Proteins of the Toca-1 family have previously been implicated in actin polymerisation in cell-free systems and during endocytosis. However, there is emerging evidence that Toca-1 family proteins could also be involved in the formation of outward facing protrusions, lamellipodia and filopodia. In an in vitro system that recapitulates the formation of filopodia-like structures (FLS) on supported lipid bilayers, Toca-1 is recruited early, suggesting a Toca-1 scaffolding mechanism could precede the recruitment of other actin regulators. One prediction of this model is that Toca-1 would bind proteins previously implicated in filopodia formation, such as formins. I found that extracts depleted of Toca-1 binding partners no longer forms filopodia-like structures and subsequently optimised pull-down assays to identify Toca-1 binding partners by mass-spectrometry. I identified four formins, Diaph1, Diaph3, FHOD1 and INF2, and as well as the actin elongation factors and filopodia proteins, Ena and VASP. I further characterised these interactions and found that Toca-1 binds Ena and VASP via its SH3 domain. The interaction is direct and is strongly reduced if the proline-rich region in Ena is deleted. VASP was still able to bind without its proline rich region, suggesting there could be additional binding sites. I discovered that the binding of Ena and VASP was dependent on the clustering state of Toca-1, whilst the binding of the previously identified Toca-1 binding partner N-WASP was not. This further supports the importance of Toca-1 oligomerisation in actin polymerisation. I tested these interactions in the FLS system and found that increasing Toca-1 concentration leads to increased recruitment of N-WASP, as well as the novel binding partner Ena to the structures, whereas an increase in VASP was not observed. SH3-domain mediated interactions are required for Toca-1 recruitment to FLS, suggesting that its membrane and protein binding activities act cooperatively. I showed that unlike N-WASP, which promotes the formation of branched actin, Ena and VASP are not required for actin polymerisation on supported lipid bilayers, suggesting that they are redundant with other factors in the elongation step of FLS formation. Ena and VASP are known to be important for the formation of neuronal filopodia and so I began to further test the role of these interactions in a cellular context using a neuronal cell culture system. As well as recruiting protein binding partners, F-BAR family proteins are implicated in stabilising lipid microdomains and can induce the clustering of phosphoinositides. I investigated the role of Toca-1 in actin polymerisation on PI(4,5)P2-rich giant unilamellar vesicles (GUVs). Actin-rich tails formed on the GUVs only when excess Toca-1 was supplemented into the extracts, and I propose that this is due to lipid organisation by Toca-1. In summary, my work suggests a model in which Toca-1 clusters, stabilises the membrane lipids and recruits regulators of actin polymerisation, such as Ena. This mechanism could be used to link actin polymerisation to the membrane in cellular protrusions, such as filopodia.

Integrins are a large family of membrane-spanning heterodimeric (αβ) receptors that bind to ligands on other cells or to extracellular matrix (ECM) proteins. These receptors mediate bidirectional signaling over the cell membrane to induce signaling cascades mediating functions as cell adhesion, spreading and migration. This signaling takes place at cell-matrix adhesions, which are sites where clustered and ligand-bound integrins connect to and mediate stabilization of the actin cytoskeleton, and induce signaling cascades. Integrins have a short cytoplasmic tail that is crucial for the bidirectional signaling, and the β1-integrin subunit exists in five splice variants only differing in the membrane-distal part of the cytoplasmic tail. This region of the almost ubiquitously expressed β1-integrin, β1A, contains two protein tyrosine motifs (NPXYs) interspaced with a threonine-rich region, while this region of the β1B splice variant is completely different and lacks known motifs. In contrast to the β1A-integrin, the β1B variant cannot mediate cell-matrix adhesion formation following binding to ECM ligands. The enteropathogenic bacterium Yersinia pseudotuberculosis binds to β1-integrins on the host cell with invasin, and this stimulates uptake of the bacterium. However, upon binding to the host cell, pathogenic Yersinia strains inject virulence effectors that block uptake. One effector responsible for the blocking is a tyrosine phosphatase, YopH. We identified the targets for this effector in the macrophage-like cell line J774A.1, which represent a professional phagocyte and thus is the likely target cell for the antiphagocytic effect of Yersinia. Two YopH target proteins were p130Cas and ADAP, of which the latter interestingly is an adapter protein specifically expressed in hematopoietic cells. ADAP has previously been implicated to participate in Fc-receptor-mediated phagocytosis and in communication between T-cell receptors and integrins. We also studied the importance of the cytoplasmic tail of β1-integrin for uptake of Yersinia. The GD25 cell line, which is a fibroblast-like cell line that lacks endogenous β1-integrins, was used together with GD25 cells transfected with β1B, β1Α or cytoplasmic tail mutants of β1A. These studies revealed that β1B-integrins could bind to invasin but not mediate uptake of Yersinia, while β1A both bound to invasin and mediated uptake. The first NPXY motif (unphosphorylated) and the double-threonines of the unique part of β1A were important for the ability of integrin to mediate uptake of Yersinia. These studies lead to the interesting finding that, when these cells were allowed to spread on invasin, those that expressed β1A spread as normal fibroblasts while for β1B-integrin-expressing cells, only finger-like protrusions of filopodia were formed. This provided us with a tool to study formation of filopodia without interference of the tightly linked process of lamellipodia formation. Initially, proteins that localized to the tip complex of these filopodia were identified. These were talin, VASP and interestingly the p130Cas-Crk-DOCK180 scaffold, while FAK, paxillin and vinculin were absent. In addition, VASP, p130Cas and Crk were shown to be important for the filopodia formation in GD25β1B. Further, the role of the actin motor myosin X, which previously has been implicated in formation of filopodia, was studied in the GD25Β1B cells and it was shown that myosin X not was important for filopodia formation, but that it recruited FAK and vinculin to the tip complexes of filopodia.

Cdc42 is a member of the Rho family of small GTPases, which, together with its homologues RhoA and Rac1, controls a multitude of cellular functions via the actin cytoskeleton. Cdc42 exerts its effects on the cytoskeleton via effector proteins of the Wiskott-Aldrich Syndrome (WASP) family and the Transducer of Cdc42-dependent Actin assembly (TOCA) family. The WASP family and their activation by Cdc42 have been thoroughly studied in vitro and are well understood. Conversely, understanding of the TOCA family remains limited by a lack of biochemical, biophysical and structural insight. An investigation of the TOCA1-Cdc42 interaction is described here, revealing a relatively low affinity interaction with a dissociation constant in the micromolar range. This is 10-100x weaker than other Rho-effector interactions and suggests that TOCA1 must first be co-localised with Cdc42 to achieve stable binding in vivo. The solution NMR structure of the Cdc42 binding HR1 domain of TOCA1 provides the first structural data on this protein and reveals some interesting structural features that may relate to binding affinity and specificity. A structural model of the Cdc42-HR1 complex provides further insight into differential specificities and affinities of GTPase-effector interactions. NMR and actin polymerisation assays provide insight into the pathway of Cdc42/TOCA1/WASP-dependent actin assembly, suggesting unidirectional displacement of TOCA1 by N-WASP. A comparison of the Cdc42- TOCA1 model with an NMR structure of Cdc42 in complex with the GTPase binding domain of WASP reveals a possible mechanism by which an ‘effector handover’ from TOCA1 to N-WASP could take place. Small GTPases such as Cdc42 are lipid modified and membrane anchored via their C- termini in vivo, so in vitro studies using truncated, unmodified GTPases are limited in their biological interpretation. This project also aimed to develop methods to study full length and membrane-anchored GTPases in vitro. Lipid modified protein was produced, which showed a weak affinity for liposomes, and so structural studies of membrane anchored protein are within reach. Further method development is now required to achieve stable membrane anchoring of lipid modified GTPases for detailed NMR studies.

Afin d’améliorer la performance et l’intégration des biomatériaux dans le tissu hôte, l’intérêt actuel est d’exploiter des approches de nanotechnologie pour produire des biomatériaux possédant des surfaces bioactives. Il est connu que l’interaction des cellules avec la surface des biomatériaux détermine la réponse du tissu hôte et le succès d’un implant. La topographie est l'un des principaux facteurs influençant l'activité fonctionnelle des cellules en contact avec des biomatériaux. Cependant, les mécanismes impliqués demeurent imprécis. Notre groupe a exploité un traitement chimique simple afin de créer des surfaces de titane nanoporeuses uniques qui expriment une influence cellulaire sélective, favorisant ainsi la formation osseuse in vivo et in vitro. Dans ce travail, nous avons réduit la durée du traitement afin d’obtenir une surface nanotopographique mono-planaire, puis évaluer l’influence d’une telle surface sur la formation par des cellules pré-ostéoblastiques MC3T3-E1 d’adhésions focales et de filopodes, ainsi que sur l’expression de gènes codant pour différentes protéines associées à l’adhésion et la signalisation cellulaire. Des disques de titane commercialement pur (cp-Ti) ont été traités avec un mélange d’acide sulfurique et de peroxyde d’hydrogène (50/50 v/v) pendant 1.5 heures. La caractérisation par microscopie électronique à balayage à haute résolution et pour microscopie à force atomique a confirmé la formation d’une surface effectivement mono-planaire caractérisée par des nanopores d’une taille moyenne de 20 ± 5 nm. Les cellules ont été mises en culture pour des périodes de 6, 24 et 72 heures sur des disques contrôles polis et avec une surface nanoporeuse. L'analyse de l’expression de la vinculine par immunofluorescence a révélé un plus grand nombre d’adhésions focales par les cellules sur la surface traitée. Le PCR quantitatif a également montré une augmentation significative de l'expression des gènes pour différents marqueurs d'adhésions focales, telles que paxilline, taline, et différentes intégrines comme par exemple les intégrines α1, β1 et α5. Par microscopie électronique à balayage, les cellules sur la surface nanoporeuse révèlent une présence plus importante de filopodes vis à vis des surfaces contrôles. Ces structures affichent de manière unique de très petites protrusions membranaires latérales d’entre 10-15 nm qui suivent les bords des nanopores. L’augmentation des adhésions focales, l'abondance des filopodes et de leurs petites protrusions pourraient engendre interaction accrue avec la surface et modifier les relations biomécaniques à l’échelle nanométrique pour déclencher des cascade régulant la prolifération cellulaire. / To improve the performance and integration of biomaterials in the host tissue, the focus is presently on exploiting nanotechnology approaches to produce biomaterials with bioactive surfaces. It is known that the cell-biomaterial interactions determine the response of the host tissue and therefore the success of implants. Topography is a key factor that influences the functional activity of cells; however, the mechanisms implicated remain unclear. Our group has exploited a simple chemical treatment to create unique nanoporous titanium surfaces that selectively influence cell behaviour and favor osteogenic activity both in vitro and in vivo. In this work, we have reduced treatment time in order to obtain a monoplanar nanostructured surface, and we have evaluated its influence on the formation of focal adhesions, filopodia, and on gene expression for different cell adhesion and signaling proteins by MC3T3-E1 pre-osteoblastic cells. Commercially pure titanium (cp-Ti) was treated with a mixture of H2SO4/H2O2 (50/50 v/v) for 1.5h. Characterization by high-resolution field-emission scanning electron microscopy and atomic force microscopy characterization showed the formation of a nanoporous surface with a mean pore diameter of 20 ± 5 nm. Cells were cultured and plated on polished (control) and nanotextured discs for periods of 6, 24 and 72 hours. Immunofluorescence analysis of vinculin expression revealed the formation of more focal adhesions by cells seeded on nanostructured surfaces. Quantitative PCR likewise showed significant increase of gene expression for various focal adhesion markers, including paxillin, talin, and different integrins such as integrin α1, β1 and α5. As compared to controls, scanning electron microscopy of cells on the treated surface revealed the presence of more filopodia. These uniquely displayed very small lateral membrane protrusions between 10-15 nm that appeared to follow the walls of the nanopores. Together with the increase in focal adhesions, the abundance of filopodia and associated protrusions could contribute to the adhesive interaction with the surface and modify the nanoscale biomechanical relationships to trigger cellular cascades regulating cell proliferation.

Thrombocytes are important players in hemostasis. There is still much to be explored regarding the molecular basis of the thrombocyte function. In our previous microarray analysis data, we found IFT122 (an intraflagellar transport protein known to be involved in cilia formation) transcripts in zebrafish thrombocytes. Given recent discoveries of non-ciliary roles for IFTs, we examined the possibility that IFT122 affects thrombocyte function. We studied the role of IFT122 in thrombocyte function. We also found that IFT122 plays a central role in thrombocyte activation initiated by the agonists ADP, collagen, PAR-1 peptide and epinephrine. Although the receptors for ADP, PAR-1 peptide and epinephrine are present in the zebrafish genome, the collagen receptor GPVI was missing. In this study, we identified G6fL as a collagen receptor in zebrafish thrombocytes. Furthermore, IFT knockdown results in reduction in Wnt signaling. The Wnt signaling has been shown to be involved in megakaryocyte proliferation and proplatelets production. Therefore, defects in IFT could lead to thrombocytopenia. Splenectomy is performed in humans to treat such conditions. Therefore, in this study we developed a survival surgery protocol for splenectomy. We have shown that number of thrombocytes and their microparticles increase following splenectomy in zebrafish. Thus overall the studies on thrombocyte function in zebrafish could enhance fundamental knowledge on hemostasis and may provide future target candidates for therapies.

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