Les matières organiques dissoutes (MOD), en tant que sources de nutriments ou potentiels vecteurs de pollution, sont impliquées dans de nombreuses problématiques environnementales. Bien qu'elles fassent l'objet de nombreuses études depuis plusieurs décennies, les mécanismes gouvernant leur solubilisation et leur transfert depuis les sols vers les systèmes aquatiques demeurent sujets à discussion. En s'appuyant sur l'étude de la composition moléculaire des MOD par hydrolyse et méthylation assistée par température et couplée à la chromatographie en phase gazeuse et à la spectrométrie de masse (HMT-CPG-SM), cette thèse a pour objectif d'apporter une meilleure compréhension de leurs mécanismes de solubilisation et de transfert à l'échelle d'un bassin versant agricole. Ce travail s'est appuyé sur le bassin versant expérimental de Kervidy-Naizin (Morbihan, Observatoire de Recherche en Environnement AgrHys) afin d'observer les processus mis en jeux à deux échelles temporelles différentes. A l'échelle de la crue, ce travail a permis de préciser l'impact des conditions hydrologiques spécifiques sur la dynamique des MOD. A l'échelle annuelle, l'utilisation conjointe de la signature isotopique du carbone (δ13C) et de la composition moléculaire des MOD a permis de préciser les mécanismes de transfert de MOD impliqués à l'échelle du versant. L'utilisation de la HMT-CPG-SM s'est avéré un outil adéquat pour l'étude de la dynamique des MOD. L'ensemble des résultats ainsi obtenus ont permis de souligner l'importance des conditions hydrologiques et en particulier de la dynamique de nappe dans les processus de solubilisation et de transfert des MOD. / Dissolved organic matter (DOM), as sources of nutrient or pollutant dissemination pathway are implied in numerous environmental issues. Although DOM have been the subject of numerous studies for several decades, the mechanisms implied for their solubilization and their transport from soils to aquatic systems are still a matter of discussion. Based on DOM molecular composition determined using thermally assisted hydrolysis and methylation –gas chromatography – mass spectrometry (THM-GC-MS), this thesis aims to provide a better understanding of their solubilization and transfer mechanisms at the scale of an agricultural headwater catchment. This work was conducted on the experimental headwater catchment of Kervidy-Naizin (France, Environmental Research Observatory AgrHys) in order to determine the processes implied at two temporal scales. At the scale of a rain event, this work has clarified the impact of hydrological conditions on the DOM dynamics. At annual scale, the use of carbon isotope signature (δ13C) and DOM molecular composition allowed to clarify the DOM transfer mechanisms at the slope scale. The use of THM-GC-MS appears to be a suitable tool for the study of DOM dynamics. The results thus obtained allowed to highlight the role of hydrological conditions and in particular the water-table level in the solubilization and transfer of DOM.

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Orientador: Francisco Manoel de Souza Braga / Banca: Leandro Müller Gomiero / Banca: Lilian Casatti / Banca: Mauricio Cetra / Banca: Lucia Ap. de Fatima Mateus / Resumo: O objetivo geral do presente estudo foi analisar a biologia e o ciclo de vida de Astyanax cf. scabripinnis paranae no ribeirão Grande, um riacho de cabeceira localizado no Parque Estadual da Serra do Mar (PESM), Núcleo Santa Virgínia, SP. Os exemplares foram coletados mensalmente de janeiro a dezembro em 2004 e 2006, utilizando-se redes de espera, redinha de mão e covo. Foram coletados dados de temperatura da água, oxigênio dissolvido e pH. Dados de pluviosidade, umidade relativa e temperatura do ar foram obtidos junto à Estação Meteorológica do PESM. Os peixes foram fixados em formalina a 10% e conservados em álcool 70%. No laboratório foram mensurados quanto ao comprimento total e padrão, peso e registrados os graus de repleção estomacal, de gordura acumulada, o sexo e os estádios de maturação gonadal. As correlações entre as variáveis ambientais e os meses de coletas foram verificadas por uma análise de componentes principais, que indicou uma separação entre períodos mais chuvosos (outubro a abril) e menos chuvosos (maio a setembro). A dieta foi analisada pelo grau de preferência alimentar. Diferenças no consumo de itens autóctones e alóctones e possíveis mudanças ontogenéticas ao longo do desenvolvimento da espécie foram verificadas por uma análise de correspondência. Para o estudo da reprodução foram analisadas as variações nos estádios de maturação, relação gonadossomática, grau de gordura acumulada, condição corporal, fecundidade e tipo de desova. O comprimento médio de primeira maturação gonadal foi estimado pelo ajuste não-linear e a condição corporal foi avaliada por modelos de análise de covariância. A fecundidade foi estimada pelo método volumétrico e relacionada ao comprimento padrão, ao peso total, ao peso das gônadas e à relação gonadossomática. No estudo do crescimento, a separação das coortes... (Resumo completo, clicar acesso eletrônico abaixo) / Abstract: The present study aimed to analyze the biology and ecology of Astyanax cf. scabripinnis paranae in the Ribeirão Grande, a headwater stream located in the Parque Estadual da Serra do Mar (PESM), Núcleo Santa Virgínia, SP. The fishes were sampled monthly from January to December in 2004 and 2006, using gillnets, sieves and funnel traps. Temperature, dissolved oxygen and pH of the water were measured. Pluviometric data, relative humidity and temperature of the air were obtained in the Meteorological Station of PESM. The fishes were fixed in 10% formalin and conserved in 70% alcohol. In the laboratory they were measured as for the total and standard length, weighed and registered the degrees of stomach repletion, of accumulated fat, the sex and the stadiums of gonad maturation. The correlation structure among the environmental variables measured in the sampling collections was verified by a principal components analysis (PCA), which indicated a separation among rainier (October to April) and the less rainy periods (May to September). Differences in the consumption of autochthonous and allochthonous items and possible ontogenetic changes along the specimens development were verified by a correspondence analysis (CA). For the study of the reproduction the variations were analyzed at the maturation stadiums, gonadossomatic relationship, degrees of accumulated fat, corporal condition, fecundity and spawning type. The mean length of first gonad maturation was assessed by a no-linear adjustment. The corporal condition was evaluated by analysis of covariance. The fecundity was estimate by the volumetric method and related to the standard length, to the total weight, to the gonad weight and to the gonadossomatic relationship. In the study of the fish growth, the cohorts' separation and their mean lengths were obtained using the package "MIXDIST" and the Bhattacharya method... (Complete abstract click electronic access below) / Doutor

<div>Agricultural headwater streams in the Midwestern United States are subject to contaminants from fields, increased sedimentation, and degradation of natural habitat. Previous research has shown that physical instream habitat degradation better explained variation in fish community structure than water chemistry. However, these studies did not include total suspended solids (TSS), which are considered a major freshwater contaminant. The objective of this study is to determine whether total suspended solids better explains fish community structure than other variables in agricultural headwater streams. Mixed linear effects modeling was used to determine the set of independent variables that best predicts each of the fish response variables of species richness, Shannon diversity index, fish density, and index of biotic integrity. Standardized coefficients were used to determine which independent variable in each of the models had the largest influence on fish response metrics. The set of independent variables that best explained species richness were mean total suspended solids, imidacloprid, discharge, and substrate richness. Shannon diversity index was explained best by the combination of maximum total suspended solids, mean total suspended solids, atrazine, total nitrogen, and discharge. Fish density was explained best by the percentage of silt and clay, dissolved oxygen, the percentage of canopy cover, cover type richness, and discharge. IBI was explained best by the combination of the percentage of silt and clay, total phosphorus, mean total suspended solids, and dissolved oxygen. Total suspended solids was the most influential independent variable for fish species richness and Shannon diversity, however the percentage of silt and clay in benthic sediments was the most influential independent variable for fish density and IBI. Results also indicate discharge and total phosphorus as being influential to fish community metrics. The results from this study suggest that models containing a combination of different types of independent variables best explain fish community structure. This study supports the use of conservation and restoration practices that reduce total suspended solids and the amount of silt and clay present in bed sediments to increase fish community integrity of agricultural headwater streams of the Midwestern United States.</div>

<p>The objective of this thesis is to evaluate the ecological consequences of buffer strip retention on riparian and terrestrial biodiversity. Earlier studies on forest buffer strips have evaluated their effectiveness in relation to water quality and aquatic biota. However, forests along streams are species rich habitats for many organism groups. Buffer strip management is assumed to be important also for protecting such species. Current approaches to biodiversity-oriented forest management practices need to be scientifically evaluated. In this thesis the effects on bryophytes and land snails have been evaluated.</p><p>A before-and-after experiment along 15 small streams in northern Sweden showed that buffer strips of 10 m on each side of the stream moderated the negative effects exhibited at the clear-cuts. The number of land snail species remained similar as to before logging and the number of vanished bryophyte species was lower in the buffer strips than in the clear-cuts. The ground moisture influenced the survival rate of land snails at the clear-cuts. At mesic sites many species vanished but at wet sites the snail fauna was unaffected by the logging.</p><p>Many bryophyte species, most of them liverworts, decreased or disappeared in the buffer strips. These were mostly growing on substrates elevated from the forest floor, such as logs, stumps and tree-bases. A number of nationally red-listed species, sensitive for changes in microclimate, were among those decreasing most. Thus, for the species in most need of protection the buffer strips were too narrow.</p><p>An experiment with bryophyte transplants followed over a season showed that wet ground moisture moderated the negative edge effects in narrow buffer strips. On the other hand, the growth in mesic and moist sites was almost as low as in comparable clear-cuts.</p><p>Microclimatic edge effects are stronger at south facing than north-facing edges of forest clear-cuts. This was shown in an experiment using bryophyte growth as an indicator of differences in microclimate. However, the depth of edge influence seemed to be similar between north- and south-facing forest edges, >30 m for one species. An explanation for this could be that wind penetrates deeper into edges than solar radiation and has a more variable direction.</p><p>In conclusion, narrow buffer strips consist entirely of edge habitat. For many species the environment in buffer strips is good enough for persistence. For others, most notably bryophyte species on convex substrates, wider buffer strips are needed to ensure long-term survival. </p>

The objective of this thesis is to evaluate the ecological consequences of buffer strip retention on riparian and terrestrial biodiversity. Earlier studies on forest buffer strips have evaluated their effectiveness in relation to water quality and aquatic biota. However, forests along streams are species rich habitats for many organism groups. Buffer strip management is assumed to be important also for protecting such species. Current approaches to biodiversity-oriented forest management practices need to be scientifically evaluated. In this thesis the effects on bryophytes and land snails have been evaluated. A before-and-after experiment along 15 small streams in northern Sweden showed that buffer strips of 10 m on each side of the stream moderated the negative effects exhibited at the clear-cuts. The number of land snail species remained similar as to before logging and the number of vanished bryophyte species was lower in the buffer strips than in the clear-cuts. The ground moisture influenced the survival rate of land snails at the clear-cuts. At mesic sites many species vanished but at wet sites the snail fauna was unaffected by the logging. Many bryophyte species, most of them liverworts, decreased or disappeared in the buffer strips. These were mostly growing on substrates elevated from the forest floor, such as logs, stumps and tree-bases. A number of nationally red-listed species, sensitive for changes in microclimate, were among those decreasing most. Thus, for the species in most need of protection the buffer strips were too narrow. An experiment with bryophyte transplants followed over a season showed that wet ground moisture moderated the negative edge effects in narrow buffer strips. On the other hand, the growth in mesic and moist sites was almost as low as in comparable clear-cuts. Microclimatic edge effects are stronger at south facing than north-facing edges of forest clear-cuts. This was shown in an experiment using bryophyte growth as an indicator of differences in microclimate. However, the depth of edge influence seemed to be similar between north- and south-facing forest edges, &gt;30 m for one species. An explanation for this could be that wind penetrates deeper into edges than solar radiation and has a more variable direction. In conclusion, narrow buffer strips consist entirely of edge habitat. For many species the environment in buffer strips is good enough for persistence. For others, most notably bryophyte species on convex substrates, wider buffer strips are needed to ensure long-term survival.

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Carbon Dioxide (CO2) emissions from streams are a significant component of the global carbon cycle.Terrestrial export of CO2 through runoff is increasingly recognized as a major source of CO2 in boreal headwater streams. However, the spatial and temporal distribution of soil water CO2 within theterrestrial landscape remains poorly quantified, contributing to large uncertainties about the origin of CO2 in headwater streams. The riparian zone (i.e. the area with fine sediments and organic rich soils closest to the stream) is accepted as a main contributor of organic carbon to streams, but its importanceas a source of CO2 is less evident. Here I evaluate the riparian zone as a main source by quantifying the contribution of lateral CO2 export from the riparian and hillslope zones to a headwater stream in a Swedish boreal catchment. Hourly measurements of CO2 concentration, conductivity, soil temperature and water table levels were taken in the riparian zone and the hillslope from June 2014 to October 2015. The riparian zone accounted for 58-89 % (August 2014 and March respectively) of the total terrestrial CO2 export from the slope to the stream. The hillslope, in turn, became a progressively larger source of CO2 to the stream during high flow events. To identify the drivers behind these zone-dependent and seasonal patterns in CO2 export, the CO2 production dissolved in the groundwater (groundwater- absorbed carbon) was estimated by taking the temporarily stored CO2  into account. The highest groundwater-absorbed carbon was observed during April and May (5.0 and 7.1 g C-CO2 m-2 month-1 respectively) which is the period with the highest discharge due to snow melt and the initiation of spring production. As such, conventional methods (gas chambers and the gradient method) may underestimate the soil respiration up to 50% during periods of high flow, as they exclude groundwater-absorbed carbon. CO2 consumption was observed in September 2014 and October 2015 (-0.2 and -0.7 g C-CO2 m-2 month-1 respectively) and may be explained by a major amount of the soil respiration being emitted instead of diluted in the groundwater during periods of low groundwater levels. It can be concludedthat, regardless of season, the riparian zone is a major source of CO2 to the headwater stream. / En signifikant mängd koldioxid (CO2) är lagrad i skog och marken. Marken i barrskogsregionernaförvarar en signifikant mängd CO2 där det partiella trycket av CO2 varierar mellan ~10 000 – 50 000 ppm i jämförelse med atmosfären (400 ppm). Mättnaden av CO2 gör att mycket avdunstar tillbaka till atmosfären. Dock absorberas en del CO2 av grundvattnet; vilket resulterar i en naturlig transport av CO2 vidare till ytvattnen där det kapillära nätverket av bäckar är största recipienten. Det är fortfarande oklart hur transporten av CO2 är distribuerad i ett vattenavrinningsområde vilket medför brister i förståelsen av en viktig processväg som kan komma att spela en större roll i framtidens kolkretslopp på grund av den globala uppvärmningen. Därför är en kvantifiering av olika områdens bidrag av CO2 till bäckarna nödvändig. Två betydande zoner i ett vattenavrinningsområde som troligen bidrar olika är: the riparian zone som är närmast bäcken och består av fina sediment med hög organisk halt och, the hillslope som är resterande område och består av grovkorniga jordar med låg organisk halt. Den förstnämnda misstänks transportera mer CO2 via grundvattnet på grund av dess närhet till bäcken, höga halter av CO2 och höga vattenmättnad men detta är ännu inte verifierat. Jag evaluerar the riparian zone som en viktig källa till CO2 i ett vattenavrinningsområde genom att kvantifiera transporten av CO2 från de två zonerna. För att förklara varför transporten varierar presenterar jag en ny modell (GVR) som beräknar den månatliga fluktuationen av den del av CO2-produktionen som absorberas i grundvattnet i the riparian zone. Mätningar av data utfördes i Västrabäcken, ett mindre vattenavrinningsområde i ett större vid namn Krycklan, i norra Sverige. En transekt av tre mätstationer (i bäcken, the riparian zone och the hillslope) installerades i den förmodade grundvattenströmningsriktningen. Resultaten visar på en hög produktion av CO2 under vårfloden (maj) då en hög grundvattenyta troligen absorberar en signifikant mängd CO2. Detta kan betyda att jordrespiration under våren underskattas då dagens mätmetoder är begränsade till mätningar i jorden av CO2 ovan grundvattenytan. Fortsatta studier rekommenderas där GVR-modellen och andra mätmetoder utförs samtidigt för att vidare utröna den kvantitativa underskattningen under perioder med hög grundvattenyta (speciellt under våren). Bidraget från the riparian zone till den totala laterala transporten av CO2 till bäcken under ett år varierar mellan 58-89 % och det månatliga transportmönstret kunde förklaras med resultaten från GVR-modellen. Resultaten verifierar att oberoende av säsong så är the riparian zone den huvudsakliga laterala koltransporten från landvegetationen; medan the hillslope procentuellt bidrar med mer CO2 under höga grundvattenflöden.

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