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Thesis (MSc (Biochemistry))--University of Stellenbosch, 2011. / ENGLISH ABSTRACT: Due to a global lack of access to potable water, a problem particularly affecting people in developing countries and the poor, improvement on existing water purification methods are necessary to provide more cost effective, accessible and efficient methods of water purification. In drinking water systems, biofilms are a potential source of contamination, which can affect the biological stability and hygienic safety of water. In industrial water systems, biofilms can cause corrosion, resistance in flow systems and a decrease in efficiency of membranes. Nanotechnology has been identified as a technology to utilize in water purification problem solving. Alternatives to the use of chemical biocides and antibiotics need to be investigated therefore; the focus of this study was the fabrication and characterization of polymer nanofibers containing silver nanoparticles as biocide and anti-biofouling nanofibers with hydrolytic enzymes immobilized on the surface. The aim of this study was to synthesize and compare poly (vinyl alcohol) (PVA) nanofibers and poly (acrylonitrile) (PAN) nanofibers with silver nanoparticles to determine which type of fiber will be the most appropriate for application in water sanitation. The two types of fibers were to be compared based on morphology, silver nanoparticle content, physical distribution of silver nanoparticles, levels of silver leaching from the fibers in water, which could imply toxicity, and most importantly, anti-microbial efficacy. Back scattering electron images revealed that silver nanoparticles in PVA nanofibers were more evenly dispersed than in PAN nanofibers, but that PAN nanofibers had higher silver nanoparticle content. This was confirmed by energy dispersive X-ray (EDX) analysis. Both PVA and PAN nanofibers containing silver nanoparticles had excellent anti-microbial activity, with PVA nanofibers killing between 91% and 99% of bacteria in a contaminated water sample and PAN nanofibers killed 100%. When investigated by SEM, the biocidal effect of PAN nanofibers containing silver nanoparticles can be observed as morphological changes in the cell walls. Neither PVA nor PAN nanofibers leached silver into water. PVA is a non-toxic and biodegradable synthetic polymer, and PVA-silver nanofibers have excellent anti-microbial activity, making it applicable in water sanitation in an environmental conscious milieu. PAN nanofibers are more conductive to the formation of silver nanoparticles, have higher silver nanoparticle content, allowing the complete sanitation of pathogenically contaminated water samples. PAN nanofibers also have better longevity and strength in water, making it ideal for water filtration and sanitation in higher throughput systems. Furthermore, immobilized enzymes are being investigated as possible alternatives to inefficient conventional methods of controlling and removing biofilms from filtration systems. This study demonstrates the covalent immobilization of two industrial proteases and an amylase enzyme onto polymer nanofibers widely used in filtration membranes. Confirmed by FTIR, these nanofibers were successfully activated by amidination, allowing the covalent immobilization of respectively two serine proteases and an α-amylase onto the fibers. When inspected visually, fibers largely retained their original morphology after activation and enzyme immobilization. Immobilized enzymes were, however visible as aggregated particles on the nanofiber surfaces. The large surface area to volume ratio provided by the nanofibers as immobilization surface, allowed sufficient amounts of enzymes to be immobilized onto the fibers so that all enzymes retained above 80% of the specific activity of the free enzymes. For each of the immobilized enzymes, just below 30% of initial activity was retained after 10 repeated cycles of use. Fibers with immobilized enzymes on their surface did not support the growth of biofilms, as opposed to plain nanofibers, which did support the growth of biofilms. When considering the combined advantages of this effective immobilization process, the robustness of the enzymes used in this study, and their effectiveness against biofilms in their immobilized state, a valuable addition has been made to technology available for the control of biofilm formation on filtration membranes, and could potentially be employed to control biofilm formation in water filtration systems. A combination of anti-microbial and anti-biofouling nanofibers into a single nanofiltration product may prove to be highly applicable in water sanitation systems. / AFRIKAANSE OPSOMMING: As gevolg van 'n wêreldwye gebrek aan toegang tot drinkbare water, 'n probleem wat veral mense in ontwikkelende lande en armes raak, is dit van belang dat bestaande metodes van watersuiwering verbeter word om voorsiening te maak vir meer koste-effektiewe, toeganklike en doeltreffende metodes van watersuiwering. In drinkwater stelsels is biofilms 'n potensiële bron van besoedeling, wat die biologiese stabiliteit en die higiëniese veiligheid van water beïnvloed. In industriële waterstelsels kan biofilms tot die verwering van pyplyne lei, weerstand in die stroomstelsels veroorsaak en 'n afname in die doeltreffendheid van membrane veroorsaak. Nanotegnologie is geïdentifiseer as 'n tegnologie wat aangewend kan word in watersuiwerings probleemoplossing. Alternatiewe vir die gebruik van chemiese antimikrobiese middels moet dus ondersoek word. Hierdie studie fokus dus op die vervaardiging en karakterisering van polimeer nanovesels met silwer nanopartikels wat ingesluit is as antimikrobiese middel en anti-biofilm vesels met hidrolitiese ensieme geïmmobiliseer op die oppervlak. Die doel van hierdie studie was om poli (viniel alkohol) (PVA) nanovesels en poli (akrielonitriel) (PAN) nanovesels te sintetiseer waarby silwer nanopartikels ingesluit is, en te bepaal watter tipe vesel die mees geskikte sal wees vir die gebruik in water sanitasie. Die twee tipes vesels is met mekaar vergelyk gebaseer op morfologie, silwer nanopartikel inhoud, fisiese verspreiding van silwer nanopartikels, vlakke van silwer uitloging vanuit die vesels in water, wat toksisiteit tot gevolg kan hê, en die belangrikste, antimikrobiese effektiwiteit. Terug verstrooiing elektron beelde het aan die lig gebring dat die silwer nanopartikels in PVA nanovesels meer eweredig versprei was as in PAN nanovesels, maar dat PAN nanovesels 'n hoër silwer nanopartikel inhoud gehad het. Dit is bevestig deur “energy dispersive X-ray” (EDX) analise. Beide PVA en PAN nanovesels met silwer nanopartikels het uitstekende antimikrobiese aktiwiteit getoon, met PVA vesels wat tussen 91% en 99% bakterieë in besoedelde water monsters kon doodmaak en PAN vesels wat 100% bakterieë kon uitwis. Wanneer vesels ondersoek is met ʼn skandeer elektronmikroskoop (SEM), kon die antimikrobiese effek van PAN vesels met silwer nanopartikels as morfologiese veranderinge in die selwande waargeneem word. Nie PVA of PAN nanovesels loog silwer uit in water nie. PVA is 'n nie-toksiese en bioafbreekbare sintetiese polimeer, en PVA-silwer nanovesels het uitstekende antimikrobiese aktiwiteit, wat dit van toepassing maak op water sanitasie in ʼn omgewings bewuste milieu. PAN vesels is meer gunstig tot die vorming van silwer nanopartikels, en het 'n hoër silwer nanopartikel inhoud, dus word patogeen besoedelde water volledig gesteriliseer. PAN vesels het ook 'n beter langslewendheid en weerstandige sterkte in water, wat dit ideaal vir water filtrasie en sanitasie in hoër deursettings stelsels maak. Geïmmobiliseerde ensieme word ook ondersoek as moontlike alternatiewe tot ondoeltreffende konvensionele metodes van beheer en die verwydering van biofilms uit water stelsels. Hierdie studie toon die kovalente immobilisasie van twee industriële proteases en 'n amilase ensiem op polimeer vesels wat gebruik word in filtrasie membrane. Bevestig deur FTIR, is PAN vesels suksesvol geaktiveer deur amidinasie, sodat die kovalente immobilisasie van onderskeidelik twee serien proteases en 'n α-amilase op die vesels moontlik is. Met visuele ondersoek kan gesien word die vesels behou grootliks hul oorspronklike morfologie na aktivering en ensiem immobilisasie. Geïmmobiliseerde ensieme is egter sigbaar as saamgevoegde deeltjies op die nanovesel oppervlaktes. Die groot oppervlakarea: volume-ratio van die vesels wat dien as immobilisasie oppervlak, laat toe dat voldoende hoeveelhede van ensieme geïmmobiliseer word sodat alle ensieme meer as 80% van die spesifieke aktiwiteit van die vrye ensieme behou. Vir elk van die geïmmobiliseer ensieme, is net minder as 30% van die aanvanklike aktiwiteit behou na 10 siklusse van hergebruik. Vesels met geïmmobiliseerde ensieme op hul oppervlaktes het nie die groei van biofilms ondersteun nie, in teenstelling met gewone vesels, sonder ensieme, wat die groei van biofilms ondersteun. As die gesamentlike voordele van hierdie doeltreffende immobilisasie proses, die robuustheid van die ensieme en hulle doeltreffendheid teen biofilms in hul geïmmobiliseerde toestand in ag geneem word, is ʼn waardevolle toevoeging gemaak tot tegnologie wat beskikbaar is vir die beheer van biofilm vorming op filtrasie membrane, en dit kan potensieel gebruik word om biofilm vorming filter stelsels te beheer. Die kombinasie van anti-mikrobiese en anti-biofilm vesels in ʼn enkele nanofiltrasie produk moet nagestreef word, omdat dit hoogs van toepassing sal wees in water sterilisasie stelsels.

A range of mesoporous materials based on SBA-15 have been prepared and characterised. The materials were templated by neutral block copolymer P123, and typically have a hexagonal (p6mm) pore structure, with high surface areas and narrow pore size distributions. The removal of the surfactant template by calcination and solvent extraction has been investigated. The aqueous stability of this material, and the hydrolysis of the surface was studied. Organic functional groups were incorporated into the silica surface by co-condensation, or by post synthesis grafting. A range of functional groups were incorporated, including amine, carboxy, allyl and thiol groups. The pore size of the materials was controlled by the addition of trimethoxybenzene during synthesis, which significantly increased the pore size and uptake capacity of the materials. The adsorption of CALB by SBA-15 was investigated, with support materials extracted by calcination or solvent extraction. Rapid uptake at high loading was observed, with a maximum loading of 450 mg g-1 measured. The leaching of the enzyme from the support was investigated, and found to be high with unfunctionalised supports. The leaching from functionalised supports incorporating sulfur groups was significantly reduced. The activity of the immobilised CALB was measured by tributyrin hydrolysis in aqueous media, and by enantioselective transesterification of (R)-1-phenylethanol in organic media. The effect of surface functionalisation for reusability and thermal stability in aqueous systems was investigated. Preliminary studies of supported CALB for dynamic kinetic resolution were carried out, with an investigation of acidic zeolites and a mesoporous supported catalyst for 1-phenylethanol racemisation. The encapsulation of immobilised CALB was investigated, and the activity and reusability of these systems studied.

N-acylation of phosphatidylethanolamine (PE) with free fatty acids catalyzed by N-acyl phosphatidylethanolamine (NAPE) synthase was reported in cotyledons of 24-h-old cotton seedlings. Here I report subcellular localization of this enzyme. Differential centrifugation, sucrose density gradient fractionation,aqueous two-phase partitioning and electron microscopy techniques were utilized to elucidate subcellular site(s) of NAPE synthase. Marker enzymes were used to locate organelles in subcellular fractions. Differential centrifugation indicated that NAPE synthase is present in more than one organelle and it is a membrane bound enzyme. Sucrose density gradient fractionations indicated that NAPE synthase is present in membranes derived from endoplasmic reticulum (ER),Golgi and possibly plasma membrane (PM) but not mitochondria, glyoxysomes or plastids. Aqueous two-phase partitioning experiments with cotton and spinach tissues supported these results but Goigi appeared to be the major site of NAPE synthesis. Electron microscopy of subcellular fractions was used to examine isolated fractions to provide visual confirmation of our biochemical results. Collectively, these results indicate that NAPE is synthesized in plant ER, Golgi and possibly PM.

A descoberta de inibidores seletivos é extremamente importante para o desenvolvimento de novos fármacos que possam ser usados no tratamento de pacientes diagnosticados com a doença de Alzheimer (DA). Neste contexto, o desenvolvimento de métodos de triagem para a identificação de novos compostos biologicamente ativos se torna interessante. Butirilcolinesterase (BChE, EC 3.1.1.8) é uma serina hidroxilase que está classicamente associada à hidrólise do neurotransmissor acetilcolina (ACh) formando colina e ácido acético. Este trabalho descreve a imobilização covalente da BChE de soro humano nas paredes internas de capilares de sílica fundida utilizando o agente espaçador glutaraldeído, e sua aplicação na triagem de inibidores seletivos. O ICER-BChE resultante foi conectado a um sistema de cromatografia líquida de alta eficiência com monitoramento on line da atividade catalítica, envolvendo detecção UV. Após os estudos das melhores condições cromatográficas, variações de pH e vazão e a influência de solventes orgânicos na atividade enzimática o método foi validado com o uso de inibidores padrões. O maior valor obtido com o ICER-BChE no parâmetro cinético, constante de Michaelis KM = 33,6 ± 6,9 mM, comparado com a enzima em solução, KM = 0,12 ± 0,02 mM, evidencia o efeito da imobilização sobre a afinidade pelo substrato. No entanto, houve retenção da atividade catalítica e seletividade frente a inibidores padrão. O método foi aplicado na triagem de novos ligantes utilizando cinco coleções de diferentes classes de compostos, entre derivados cumarínicos, complexos metálicos com cobre (Cu), complexos metálicos com cobalto (Co) e zinco (Zn), glicosídeos, e derivados de fenilpropanóides e ácido barbitúrico. Desta triagem foram selecionados sete compostos promissores com os quais foram realizados os estudos sobre a potência mínima inibitória (IC50) e destes quatro foram escolhidos para estudos de mecanismos de ação utilizando o ICER-BChE. Dos complexos metálicos os melhores compostos foram o HPTBCu (IC50 = 8,74 ± 1,5 µM, Ki = 9,6 ± 0,5 M), o NarBCu (IC50 = 8,0 ± 1,4 µM, Ki = 2,0 ± 0,1 M) ambos com mecanismo competitivo o HesFCu (IC50 = 13,6 ± 2,9 µM), o NNINABCu (IC50 = 94,8 ± 16) e o NarFCu (IC50 = 81,7 ± 13). Dos derivados cumarínicos os compostos 17 (IC50 =109 ± 21 µM, Ki = 108 ± 10 M) e 19 (IC50 =128 ± 28 µM, Ki =36.0 ± 5.0 M) apresentaram mecanismo incompetitivo. Os resultados demonstraram que a abordagem proposta é útil na triagem on line de inibidores seletivos, pois fornece resultados rápidos, precisos e reprodutíveis. / The discovery of selective inhibitors is extremely important for the development of drugs that can be used in the treatment of patients diagnosed with the Alzheimer disease (AD). In this context, the development of screening methods for the identification of new, biologically active compounds is a challenging task. Butyrylcholinesterase (BChE, EC 3.1.1.8) is a serine hydroxylase that is classically associated with the hydrolysis of the neurotransmitter acetylcholine (ACh), which yields choline and acetic acid. This paper describes the development of capillary enzyme reactors (ICERs) containing BChE from the human serum, covalently immobilized onto silica fused capillaries, using glutaraldehyde as spacer, and its application in the screening of selective inhibitors. The resulting BChE-ICER was connected to a liquid chromatography system high efficiency where monitoring of activity was online involving UV detection. After studying the best chromatographic conditions, pH variations, flow-rate and the influence of organic solvents on enzyme activity method was validated using standard inhibitors. The higher value obtained with the BChE-ICER in kinetic parameter, constant Michaelis KM = 33.6 ± 6.9 mM, compared with the enzyme in solution, KM = 0.12 ± 0.02 mM, shows the effect of immobilized on the affinity substrate. However, there was retention of catalytic activity and selectivity towards standard inhibitors. The method was applied in the screening of new ligands using collections of five different compounds, among coumarin derivatives, metal complexes with copper (Cu) metal complexes with cobalt (Co) and zinc (Zn), glycosides, phenylpropanoids and derivatives, and barbituric acid. These screenings were selected seven promising compounds with which the studies were made on the minimum inhibitory potency (IC50) and these four were chosen for studies of mechanisms of action using the ICER-BChE. Of the compounds metal complexes best were HPTBCu (IC50 = 8,74 ± 1,5 µM, Ki = 9,6 ± 0,5 M), NarBCu (IC50 = 8,0 ± 1,4 µM, Ki = 2,0 ± 0,1 M) both competitive mechanism, the HesFCu (IC50 = 13.6 ± 2.9 µM), NNINABCu (IC50 = 94.8 ± 16 µM) and NarFCu (IC50 = 81.7 ± 13 µM). Of coumarin derivatives, 17 (IC50 =109 ± 21 µM, Ki = 108 ± 10 M) and 19 (IC50 =128 ± 28 µM, Ki =36.0 ± 5.0 M) showed mechanism uncompetitive. The results demonstrated that the proposed approach is useful in screening for selective inhibitors online because it provides quick results, accurate and reproducible.

Glucose isomerase (GI) catalyzes the conversion of D-glucose to D-fructose in vitro. It is one of the bulkiest commercial enzymes, essential for the mass production of high-fructose corn syrup (HFCS) and crystalline fructose. / In this study, the effects of nitrogen sources, carbon sources, expression vectors, host strains, bacterial (Vitreoscilla) hemoglobin, selective pressure, plasmid stability and fermentation process on the GI production were investigated. The results showed that E. coli could express cloned thermostable GI at high expression level. E. coli transformed with the recombinant plasmid P-lac-GI gave the best result in term of total GI production and expression level. Corn steep liquor could be used as a cheap alternative nitrogen source for what was in LB medium. The concentration of glucose affected the expression level of GI significantly. Replacement of the ampicillin resistance gene by kanamycin resistance gene improved the plasmid stability leading to high productivity of GI in fed-batch fermentation. A suicide system could further improve the plasmid stability resulting in a high productivity of GI. A feeding strategy for fed-batch fermentation with the optimized parameters was developed to result in the production of up to 3g/L recombinant GI, which constituted 50% of the total soluble proteins. The total yield was 5-fold higher than that from flask experiments and 7-fold higher than the highest ever recorded. The expression level was also 100% higher than it was in other reports. / Liu Zhaoming. / "August 2005." / Advisers: J. Wang; W. P. Fong. / Source: Dissertation Abstracts International, Volume: 67-07, Section: B, page: 3780. / Thesis (Ph.D.)--Chinese University of Hong Kong, 2005. / Includes bibliographical references (p. 129-154). / Electronic reproduction. Hong Kong : Chinese University of Hong Kong, [2012] System requirements: Adobe Acrobat Reader. Available via World Wide Web. / Electronic reproduction. [Ann Arbor, MI] : ProQuest Information and Learning, [200-] System requirements: Adobe Acrobat Reader. Available via World Wide Web. / Abstract in English and Chinese. / School code: 1307.

Glucose isomerase (GI) catalyzes the isomerization of glucose to fructose and consequently is one of the bulkiest industrial enzyme for the manufacture of high fructose corn syrup and crystalline fructose. The GI is used in industry mainly in the form of immobilized enzyme. / In this work, the immobilization of GI had been studied by several methods: ion exchange adsorption, covalent binding, alginate cells entrapment and cells cross-linking. Three kinds of carrier support (ion exchange resin, epoxy resin and amino resin) have been used in the immobilization of cells-free enzyme; the whole cells immobilization of GI by cross-linking agents polyethyleneimid and glutaraldehyde were critically examined. The results show that the cells cross-linking is the best method to prepare the immobilized GI products, as it is high in specific activity and thermostability, and low the cost. The method is likely to make significant contribution to the field of immobilization, its application has expanding rapidly in many walks of the society, including environment protection, food and pharmaceutical industries. / Jin, Caike. / "August 2005." / Adviser: Jun Wang. / Source: Dissertation Abstracts International, Volume: 67-07, Section: B, page: 3521. / Thesis (Ph.D.)--Chinese University of Hong Kong, 2005. / Includes bibliographical references (p. 125-152). / Electronic reproduction. Hong Kong : Chinese University of Hong Kong, [2012] System requirements: Adobe Acrobat Reader. Available via World Wide Web. / Electronic reproduction. [Ann Arbor, MI] : ProQuest Information and Learning, [200-] System requirements: Adobe Acrobat Reader. Available via World Wide Web. / Abstract in English and Chinese. / School code: 1307.

Thesis (doctoral)--Lund University, 1997. / Added t.p. with thesis statement inserted.

Thesis (doctoral)--Lund University, 1997. / Added t.p. with thesis statement inserted.

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