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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Protein Kinase Mzeta (PKM-ζ) Regulates Kv1.2 Dependent Cerebellar Eyeblink Classical Conditioning

Chihabi, Kutibh 01 January 2017 (has links)
Learning and memory has been a topic that has captured the attention of the scientific and public communities since the dawn of scientific discovery. Without the faculty of memory, mammals cannot experience nor function in the world; among homosapiens specifically, language, relationships, and personal identity cannot be developed (Eysenck, 2012). After all, some philosophers such as John Locke argued we are nothing but a collection of past memories in which we have developed and improved upon (Nimbalkar, 2011). Understanding the cellular mechanisms behind learning, and the subsequent formation of memory, has been a topic that has garnered scientific interest for many decades. One particular kinase that has been at the center of attention in the last decade is the serine/threonine kinase PKM-ζ, an N-terminal truncated form of PKC-ζ that renders it constitutively active (Hernandez et al., 2003). PKM-ζ has long been implicated in a cellular correlate of learning, long-term potentiation (LTP). Inhibition of PKM-ζ with Zeta-inhibitory peptide (ZIP) has been shown in many brain structures to disrupt maintenance of AMPA receptors, irreversibly disrupting numerous forms of learning and memory that have been maintained for weeks. The voltage-gated potassium channel Kv1.2 is a critical modulator of neuronal physiology, including dendritic excitability, action potential propagation, and neurotransmitter release. While expressed in various mammalian tissues, Kv1.2 is most prevalent in the cerebellum where it modulates both dendritic excitability of Purkinje cells (PCs) and basket cell (BC) inhibitory input to PCs. Because PCs are the main computational unit of the cerebellar cortex and provide its sole output (Napper et al., 1988; Harvey et al., 1991), regulation of synaptic Kv1.2 is predicted to have a major role in cerebellar function. Pharmacological inhibition of Kv1.2 in cerebellar PC dendrites increases excitability (Khavandgar et al., 2005), while its inhibition in BC axon terminals increases inhibition to PCs (Southan & Robertson, 1998). Interestingly, two prior studies have demonstrated that PKC-ζ, an atypical Protein Kinase C, is able to phosphorylate and bind cerebellar Kvβ2, a Kv1.2 auxiliary subunit. (Gong et al., 1999; Croci et al., 2003). Delay eyeblink conditioning (EBC) is an established model for the assessment of cerebellar learning. Despite being highly expressed in the cerebellum, no studies have examined how regulation of cerebellar PKM-ζ may affect cerebellar-dependent learning and memory nor have they examined the possible effect PKM-ζ may have on Kv1.2. The goal of this dissertation was to determine whether PKM-ζ could modulate EBC in a Kv1.2 dependent manner. Through the use of microscopy techniques we have shown that PKM-ζ is highly expressed in the cerebellar cortex, primarily in the PC, and by the use of pharmacological manipulations, it was found that PKM-ζ has an important role in regulating the acquisition of EBC. Through the use of biotinylation, flow cytometry, and behavioral manipulations, it was determined that PKM-ζ regulates Kv1.2 during eyeblink conditioning. These studies provided the first evidence that PKM-ζ has a role for learning and memory in the cerebellum, and the first evidence of PKM-ζ regulating a voltage-gated ion channel rather than a ligand-gated ion channel such as AMPA receptors.
2

Ubiquitin Ligase Trim32 and Chloride-sensitive WNK1 as Regulators of Potassium Channels in the Brain

Cilento, Eugene Miler 01 January 2015 (has links)
The voltage-gated potassium channel Kv1.2 impacts membrane potential and therefore excitability of neurons. Expression of Kv1.2 at the plasma membrane (PM) is critical for channel function, and altering Kv1.2 at the PM is one way to affect membrane excitability. Such is the case in the cerebellum, a portion of the brain with dense Kv1.2 expression, where modulation of Kv1.2 at the PM can impact electrical activity of neurons and ultimately cerebellum-dependent learning. Modulation of Kv1.2 at the PM can occur through endocytic trafficking of the channel; however mechanisms behind this process in the brain remain to be defined. The goal of this dissertation was to identify and characterize modalities endogenous to the brain that influence the presence of Kv1.2 at the neuronal plasma membrane. Mass spectrometry (MS) was used to first identify interacting proteins and post-translational modifications (PTM) of Kv1.2 from cerebellar tissue, and the roles of these interactions and modifications on Kv1.2 function were evaluated in two studies: The first study investigated Trim32, a protein enzyme that catalyzes ubiquitylation, a PTM involved in protein degradation, but also in non-degradative events such as endocytic trafficking. Trim32 was demonstrated to associate and localize with Kv1.2 in cerebellar neurons by MS, immunoblotting (IB), and immunofluorescence (IF), and also demonstrated the ability to ubiquitylate Kv1.2 in vitro through purified recombinant proteins. Utilizing cultured cells through a combination of mutagenesis, biochemistry, and quantitative MS, a working model of Kv1.2 modulation was developed in which Trim32 influences Kv1.2 surface expression by two mechanisms that both involve cross-talk of ubiquitylation and phosphorylation sites of Kv1.2. The second study investigated WNK1, a chloride-sensitive kinase which regulates cellular homeostasis. Using MS, IB, and IF, WNK1 was demonstrated to associate and localize with Kv1.2 in the cerebellum, and a combination of mutagenesis and pharmacology in both wild-type and WNK1-knockout cultured cells produced a working model whereby WNK1 modulates surface Kv1.2. Activation of the downstream target SPAK kinase, also identified by MS to associate with Kv1.2 in the brain, by WNK1 was additionally found to influence the manner of WNK1 modulation of Kv1.2. In addition to providing new models of Kv1.2 modulation in the brain, these studies propose novel biological roles for Trim32 and WNK1 that may ultimately impact neuronal excitability.
3

The Sigma-1 Receptor as a Atypical Kv1.2 Auxiliary Subunit

Abraham, Madelyn Jean 24 September 2018 (has links)
Delayed-rectifier potassium channels comprised of the Kv1.2 subunit are critical in maintaining appropriate neuronal excitability and determining the threshold for action potential firing. This is attributed in part to the interaction of the Kv1.2 subunit with an unidentified molecule that confers bimodal channel activation gating, allowing neurons to adapt to repetitive trains of stimulation and protecting against hyperexcitability. It is well established that the Sigma-1 receptor (Sig-1R) regulates members of the Shaker K+ channel family at baseline and upon Sig-1R ligand-activation. While an interaction between Kv1.2 and Sig-1R has been previously demonstrated, the biophysical nature of this interaction has not been elucidated. We hypothesized that Sig-1R may regulate the Kv1.2 biophysical properties and may further act as the unidentified modulator of Kv1.2 activation gating. To explore the interaction between Kv1.2 and Sig-1R, whole-cell voltage-clamp electrophysiology and apFRET imaging experiments were performed in recombinant HEK293 cells transiently transfected with Kv1.2 and Sig-1R. It was found that ligand-activation of Sig-1R decreases Kv1.2 current amplitude, likely due to a ligand-dependent change in Sig-1R activity rather than increased association of Sig-1R with Kv1.2. Further, we show that Sig-1R interacts with Kv1.2 in baseline conditions to modulate bimodal activation gating. We show that Sig-1R modulation of Kv1.2 is abolished both in the presence of Kvβ2, a known auxiliary subunit of Kv1.2, and following expression of the Sig-1R mutation underlying ALS16 (Sig-1R-E102Q). These data respectively suggest that Kvβ2 physically occludes the interaction of the Sig-1R with Kv1.2, and that E102 may be a residue critical for efficient Sig-1R modulation of Kv1.2. Taken together, this data provides novel insights regarding the modulation of neuronal delayed-rectifier potassium channels by Sig-1R. This work provides a new role for Sig-1R in the regulation of neuronal excitability and introduces a mechanism of pathophysiology in Sig-1R dysfunction.
4

Isolamento, caracterização molecular e funcional de uma nova toxina presente na peçonha do escorpião Tityus serrulatus / Isolation, molecular and functional characterization of a new toxin present in the Tityus serrulatus scorpion venom

Cerni, Felipe Augusto 16 December 2016 (has links)
O escorpião Tityus serrulatus (Ts) é o responsável pela maioria casos de envenenamento escorpiônicos do Brasil. Embora sua peçonha seja constituída de inúmeros componentes, as neurotoxinas apresentam maior relevância por interagirem especificamente com canais para sódio (Nav) ou potássio (Kv) dependentes de voltagem. Até o momento, já foram descritas 20 neurotoxinas (Ts1 -> Ts20) na peçonha do Ts. No entanto, através de análises ômicas, estima-se que este número seja bem superior. Toxinas que interagem seletivamente com canais iônicos são utilizadas como ferramentas farmacológicas, pois permitem a identificação de canais específicos e a determinação de seus papéis fisiológicos. Adicionalmente, estas toxinas podem ser utilizadas para o desenvolvimento de novos medicamentos para tratar doenças relacionadas a canais iônicos. Considerando o elevado potencial biotecnológicos desta classe de moléculas, o presente trabalho isolou (através de 3 etapas cromatográficas) e caracterizou uma nova toxina da peçonha de Ts, denominada Ts19 Frag-II. A nova toxina demonstrou possuir 49 resíduos de aminoácidos e massa molecular de 5534,54012 Da. Classificada como ?-KTx, especula-se que a Ts19 Frag-II seja produzida a partir de uma modificação pós-transducional, denominada neste estudo de post-splitting, de um transcrito da Ts19. A caracterização funcional da Ts19 Frag-II foi realizada utilizando diferentes ensaios de atividade biológica. Uma extensa avaliação eletrofisiológica em canais iônicos (16 Kvs e 5 Navs) expressos em oócitos de X. leavis demonstrou que a toxina é capaz de bloquear seletivamente canais para potássio do tipo Kv1.2 (IC50 = 544 ± 32 nM). Ensaios in vivo (camundongos C57BL/6) de dor revelaram que a Ts19 Frag-II (2 e 4?g) não é capaz de induzir comportamento nociceptivo espontâneo ou mecânico em camundongos, tanto pela administração intraplantar quanto pela via intratecal. Ensaios in vivo (camundongos BALB/c) também demonstraram que a nova toxina (4 e 8?g) induz aumento dos níveis séricos de ureia, ALT, ?-globulina, IL-6, TNF-?, IL-17A e NO, além de diminuir a quantidade de ?-globulinas. Adicionalmente, utilizando ensaios in vitro de cultura celular de linfócitos T CD4+, demonstrou-se que a Ts19 Frag-II (2 ?g) foi capaz de diminuir a diferenciação de células Th17, assim como suprimir sua função (diminuiu a produção de IL-17 e IL-22). Assim, no presente estudo foi realizado o isolamento e a caracterização molecular e funcional de uma nova toxina de Ts, a qual apresentou atividade neurotóxica e pró-inflamatória, podendo contribuir significativamente para a gravidade do quadro de envenenamento ocasionado pelo escorpião Ts. Adicionalmente, sua seletividade para canais Kv1.2 faz com que Ts19 Frag-II possa ser utilizada como ferramenta de estudo deste canal iônico / The scorpion Tityus serrulatus (Ts) is responsible for most cases of scorpion envenomations in Brazil. Although its venom consist of many components, neurotoxins present major relevance because their specific interaction with voltage-gated sodium (Nav) or potassium (Kv) channels. So far, 20 neurotoxins have been described (Ts1 -> Ts20) in the Ts venom. However, omics analysis indicate that this number is much higher. Toxins that interact selectively with ion channels are used as pharmacological tools, as they allow the identification of specific channels and the determination of their physiological roles. Additionally, these toxins may be used for the development of new drugs for treating disorders related to ion channels. Considering the high biotechnology potential of this class of molecules, this study isolated (by 3 chromatographic steps) and characterized a new toxin from Ts venom, named Ts19 Frag-II. The novel toxin presented 49 amino acid residues and a molecular mass of 5534.54012 Da. Classified as ? - KTx, it is speculated that the Ts19 Frag-II is produced from a post- translational modification, referred in this study as post- splitting, a transcript of Ts19. The functional characterization of Ts19 Frag-II was performed using different biological assays. The extensive electrophysiological study on ion channels (16 Kvs and 5 Navs) expressed in oocytes of X. leavis showed that the toxin is able to selectively block the potassium channel Kv1.2 (IC50 = 544 ± 32 nM). In vivo assays (C57BL/6 mice) of nociception showed that Ts19 Frag-II (2 and 4?g) is not able to induce spontaneous or mechanical nociceptive behavior in mice, both by intraplantar as by intrathecal administration. In vivo assays (BALB/c mice) also demonstrated that the novel toxin (4 and 8?g) increased serum levels of urea, ALT, ?-globulin, IL-6, TNF-?, IL-17A and NO, besides decreasing ?-globulins. In addition, using in vitro assays of CD4+ T-lymphocyte cell culture, it was demonstrated that Ts19 Frag-II (2 ug) was able to decrease the differentiation of Th17 cells, as well as it suppresses Th17 function (decreased IL-17 and IL-22 production). Therefore, the present study isolated and performed the molecular and functional characterization of a new toxin from Ts, which presented neurotoxic and pro-inflammatory activity and could contribute significantly to the severity of the envenoming caused by the Ts scorpion. Moreover, based on its selectivity for Kv1.2 channels, this toxin could be used as a tool to study this type of ion channel
5

Modulation de canaux potassiques sensibles au voltage par le phosphatidylinositol-4,5-bisphosphate / Modulation of voltage-gated potassium channels by phosphatidylinositol-4,5-bisphosphate

Kasimova, Marina 02 December 2014 (has links)
Les canaux potassiques (Kv) dépendants du voltage sont des protéines transmembranaires qui permettent le flux passif d’ions potassium à travers une membrane plasmique lorsque celle-ci est dépolarisée. Ils sont constitués de quatre domaines périphériques sensibles au voltage et un domaine central, un pore, qui délimite un chemin hydrophile pour le passage d’ions. Les domaines sensibles à la tension (VSD) et le pore sont couplés, ce qui signifie que l’activation des VSD déclenche l’ouverture du pore, et qu’un pore ouvert favorise l’activation des VSD. Le phosphatidylinositol-4,5-bisphosphate (PIP2) est un lipide mineur du feuillet interne de la membrane plasmique. Ce lipide fortement chargé négativement module le fonctionnement de plusieurs canaux ioniques, y compris les membres de la famille Kv. En particulier, l’application de ce lipide à Kv1.2 et Kv7.1, deux canaux homologues, augmente leur courant ionique. Cependant, alors que Kv1.2 est capable de s’ouvrir en l’absence de PIP2, dans le cas de Kv7.1, ce lipide est absolument nécessaire pour l’ouverture du canal. En outre, dans Kv1.2, PIP2 induit une perte de fonction, qui est manifesté par un mouvement retardé des VSD. Jusqu’à présent, les mécanismes sous-jacents à de telles modulations des canaux Kv par PIP2 restent inconnus. Dans ce travail, nous tentons de faire la lumière sur ces mécanismes en utilisant des simulations de dynamique moléculaire (DM) combinées avec une approche expérimentale, entreprise par nos collaborateurs. En utilisant des simulations de DM sans contrainte, nous avons identifié les sites potentiels de liaison du PIP2 au Kv1.2. Dans l’un de ces sites, PIP2 interagit avec le canal de sorte à former des ponts salins dépendants de l’état du canal, soit avec le VSD soit avec le pore. Sur la base de ces résultats, nous proposons un modèle pour rationaliser les données expérimentales connues. En outre, nous avons cherché à évaluer quantitativement la perte de fonction induite par la présence de PIP2 au voisinage du VSD du Kv1.2. En particulier, nous avons calculé l’énergie libre des deux premières transitions le long de l’activation du VSD en présence et en l’absence de ce lipide. Nous avons constaté que PIP2 affecte à la fois la stabilité relative des états du VSD et les barrières d’énergie libre qui les séparent. Enfin, nous avons étudié les interactions entre PIP2 et un autre membre de la famille Kv, le canal Kv7.1 cardiaque. Dans le site de liaison de PIP2 que nous avons identifié pour ce canal, l’interaction entre les résidus positifs de Kv7.1 et le lipide sont dépendants de l’état du VSD, comme dans le cas de Kv1.2. On montre que cette interaction est importante pour le couplage entre les VSD et le pore, couplage qui est par ailleurs affaibli à cause de la répulsion électrostatique entre quelques résidus positifs. Ces résultats et prédictions ont été vérifiés par les données expérimentales obtenues par nos collaborateurs / Voltage-gated potassium (Kv) channels are transmembrane proteins that enable the passive flow of potassium ions across a plasma membrane when the latter is depolarized. They consist of four peripheral voltage sensor domains, responding to the applied voltage, and a central pore domain that encompasses a hydrophilic path for passing ions. The voltage sensors and the pore are coupled, meaning that the activation of the voltage sensors triggers the pore opening, and the open pore promotes the activation of the voltage sensors. Phosphatidylinositol-4,5-bisphosphate (PIP2) is a minor lipid of the inner plasma membrane leaflet. This highly negatively charged lipid was shown to modulate the functioning of several ion channels including members of the Kv family. In particular, application of this lipid to Kv1.2 and Kv7.1, two homologous channels, enhances their ionic current. However, while Kv1.2 is able to open without PIP2, in the case of Kv7.1, this lipid is absolutely required for opening. Additionally, in Kv1.2, PIP2 induces a loss of functioning, which is manifested by delayed motions of the voltage sensors. So far, the mechanism underlying the Kv channels modulation by PIP2 remains unknown. In the present manuscript, we attempt to shed light on this mechanism using molecular dynamics (MD) simulations combined with experiments, which was undertaken by our collaborators. Using unconstrained MD simulations, we have identified potential PIP2 binding sites in Kv1.2. In one of these sites, PIP2 interacts with the channel in a state-dependent manner forming salt bridges either with the voltage sensor or with the pore. Based on these findings, we propose a model rationalizing the known experimental data. Further, we aimed to estimate the loss of functioning effect induced by PIP2 on the Kv1.2 voltage sensors. In particular, we have calculated the free energy of the first two transitions along the activation path in the presence and absence of this lipid. We found that PIP2 affects both the relative stability of the voltage sensor states and the free energy barriers separating them. Finally, we studied the interactions between PIP2 and another member of the Kv family, the cardiac channel Kv7.1. In the PIP2 binding site that we have identified for this channel, the interaction between positive residues of Kv7.1 and the lipid was state-dependent, as in the case of Kv1.2. This state-dependent interaction, however, is prominent for coupling between the voltage sensors and the pore, which is otherwise weakened due to electrostatic repulsion of some positive residues. These findings are in a good agreement with the experimental data obtained by our collaborators
6

Learning Related Regulation of a Voltage-Gated Ion Channel in the Cerebellum

Fuchs, Jason R. 01 January 2016 (has links)
The neural mechanisms that support learning and memory are still poorly understood. Much work has focused on changes in neurotransmitter receptor expression, while changes in voltage-gated ion channel expression have been largely unexplored, despite the fact that voltage-gated ion channels govern neuronal excitability. Here we used eyeblink conditioning (EBC) in rats, a model of learning and memory with a well-understood neural circuit, to examine regulation of voltage-gated ion channels as a consequence of learning. EBC is a form of classical conditioning that involves pairings of a behaviorally neutral conditioned stimulus (CS) and an eyeblink eliciting unconditioned stimulus (US) over many trials to produce an eyeblink conditioned response (CR) to the CS in anticipation of the US. The acquisition and generation of the eyeblink CR is governed by plasticity at various sites in the cerebellum, both in the cerebellar cortex and the interpositus nucleus (IPN). Purkinje cells (PCs) are the primary neuron in the cerebellar cortex and these cells represent the sole output of the cerebellar cortex. PCs tonically inhibit the neurons of the IPN; the IPN is the start of the eyeblink pathway. In order for a CR to be generated, the inhibition of the IPN by PCs must be lifted. Basket cells (BCs) are small inhibitory interneurons that form synapses near the PC soma. These neurons are strategically located to strongly regulate PC output through inhibitory input near the axon hillock. BC axon terminals have the highest expression of Kv1.2, an alpha subunit of the Kv1 (Shaker) family of voltage-gated potassium channels, in the cerebellum. In addition, significant Kv1.2 expression is found on PC dendrites. Blocking Kv1.2 leads to increased GABAergic input to PCs and facilitates EBC. In the current work, we addressed the question of whether EBC itself regulates surface expression of Kv1.2 in cerebellar cortex. Rats received three days of either EBC, explicitly unpaired stimulus presentations, or no stimuli, and cerebellar tissue was harvested and analyzed via biotinylation/western blot (WB) and multiphoton microscopy (MP) techniques. In the first experiment, the Unpaired group showed significantly reduced surface Kv1.2 expression at BC axon terminals as measured by MP, but no changes observed with the WB measure, which measures expression at both BC axon terminals and PC dendrites. The second experiment used the same procedures but examined cerebellar tissue following a shorter training procedure. We hypothesized that the Paired and Unpaired groups would show similar Kv1.2 surface expression earlier in training. The Unpaired group showed increased surface Kv1.2 compared to the other two groups in the WB measures, but no differences were observed in the MP measure. Paired group rats that did not exhibit CRs showed the same pattern as the Unpaired group. Overall, we observed training and location specific changes in surface Kv1.2 expression, suggesting that learning does appear to regulate voltage-gated ion channel expression in the mammalian brain. Increased surface Kv1.2 early in training before CR expression emerges may set the stage for other mechanisms to govern the expression of the learned response. Prolonged stimulus input that is unmodulated by expression of a learned response, such as in the Unpaired group in the first experiment, leads to long-term changes in surface Kv1.2 expression exclusively at BC axon terminals.
7

Voltage sensor activation and modulation in ion channels

Schwaiger, Christine S January 2012 (has links)
Voltage-gated ion channels play fundamental roles in neural excitability, they are for instance responsible for every single heart beat in our bodies, and dysfunctional channels cause disease that can be even lethal. Understanding how the voltage sensor of these channels function is critical for drug design of compounds targeting neuronal excitability. The opening and closing of the pore in voltage-gated potassium (Kv) channels is caused by the arginine-rich S4 helix of the voltage sensor domain (VSD) moving in response to an external potential. In fact, VSDs are remarkably efficient at turning membrane potential into conformational changes, which likely makes them the smallest existing biological engines. Exactly how this is accomplished is not yet fully known and an area of hot debate, especially due to the lack of structures of the resting and intermediate states along the activation pathway. In this thesis I study how the VSD activation works and show how toxic compounds modulate channel gating through direct interaction with these quite unexplored drug targets. First, I show that a secondary structure transition from alpha- to 3(10)-helix in the S4 helix is an important part of the gating as this helix type is significantly more favorable compared to the -helix in terms of a lower free energy barrier. Second, I present new models for intermediate states along the whole voltage sensor cycle from closed to open and suggest a new gating model for S4, where it moves as a sliding 3(10)-helix. Interestingly, this 3(10)-helix is formed in the region of the single most conserved residue in Kv channels, the phenylalanine F233. Located in the hydrophobic core, it directly faces S4 and creates a structural barrier for the gating charges. Substituting this residue alters the deactivation free energy barrier and can either facilitate the relaxation of the voltage sensor or increase the free energy barrier, depending on the size of the mutant. These results are confirmed by new experimental data that supports that a rigid ring at the phenylalanine position is the rate-limiting factor for the deactivation gating process, while the activation is unaffected. Finally, we study how the activation can be modulated for pharmaceutical reasons. Neurotoxins such as hanatoxin and stromatoxin push S3b towards S4 helix limiting S4's flexibility. This makes it harder for the VSD to activate and might explain the stronger binding affinities in resting state. All these results are highly important both for the general topic of biological macromolecules undergoing functionally critical conformational transitions, as well as the particular case of voltage-gated ion channels where understanding of the gating process is probably the key step to explain the effects of mutations or drug interactions. / <p>QC 20121115</p>
8

Computer-Aided Drug Design for Membrane Channel Proteins / Computergestützte Medikamentenentwicklung für Membrankanalproteine

Wacker, Sören 07 August 2012 (has links)
No description available.
9

Refining Genotypes and Phenotypes in KCNA2-Related Neurological Disorders

Döring, Jan H., Schröter, Julian, Jüngling, Jerome, Biskup, Saskia, Klotz, Kerstin A., Bast, Thomas, Dietel, Tobias, Korenke, G. Christoph, Christoph, Sophie, Brennenstuhl, Heiko, Rubboli, Guido, Moller, Rikke S., Lesca, Gaetan, Chaix, Yves, Kölker, Stefan, Hoffmann, Georg F., Lemke, Johannes R., Syrbe, Steffen 06 February 2024 (has links)
Pathogenic variants in KCNA2, encoding for the voltage-gated potassium channel Kv1.2, have been identified as the cause for an evolving spectrum of neurological disorders. Affected individuals show early-onset developmental and epileptic encephalopathy, intellectual disability, and movement disorders resulting from cerebellar dysfunction. In addition, individuals with a milder course of epilepsy, complicated hereditary spastic paraplegia, and episodic ataxia have been reported. By analyzing phenotypic, functional, and genetic data from published reports and novel cases, we refine and further delineate phenotypic as well as functional subgroups of KCNA2-associated disorders. Carriers of variants, leading to complex and mixed channel dysfunction that are associated with a gain- and loss-of-potassium conductance, more often show early developmental abnormalities and an earlier onset of epilepsy compared to individuals with variants resulting in loss- or gain-of- function. We describe seven additional individuals harboring three known and the novel KCNA2 variants p.(Pro407Ala) and p.(Tyr417Cys). The location of variants reported here highlights the importance of the proline(405)–valine(406)–proline(407) (PVP) motif in transmembrane domain S6 as a mutational hotspot. A novel case of self-limited infantile seizures suggests a continuous clinical spectrum of KCNA2-related disorders. Our study provides further insights into the clinical spectrum, genotype–phenotype correlation, variability, and predicted functional impact of KCNA2 variants.
10

Dynamics of the voltage-sensor domain in voltage-gated ion channels : Studies on helical content and hydrophobic barriers within voltage-sensor domains

Schwaiger, Christine S. January 2011 (has links)
Voltage-gated ion channels play fundamental roles in neural excitability and thus dysfunctional channels can cause disease. Understanding how the voltage-sensor of these channels activate and inactivate could potentially be useful in future drug design of compounds targeting neuronal excitability. The opening and closing of the pore in voltage-gated ion channels is caused by the arginine-rich S4 helix of the voltage sensor domain (VSD) moving in response to an external potential. Exactly how this movement is accomplished is not yet fully known and an area of hot debate. In this thesis I study how the opening and closing in voltage-gated potassium (Kv) channels occurs. Recently, both experimental and computational results have pointed to the possibility of a secondary structure transition from α- to 3(10)-helix in S4 being an important part of the gating. First, I show that the 3(10)-helix structure in the S4 helix of a Kv1.2-2.1 chimera protein is significantly more favorable compared to the α-helix in terms of a lower free energy barrier during the gating motion. Additional I suggest a new gating model for S4, moving as sliding 310-helix. Interestingly, the single most conserved residue in voltage- gated ion channels is a phenylalanine located in the hydrophobic core and directly facing S4 causing a barrier for the gating charges. In a second study, I address the problem of the energy barrier and show that mutations of the phenylalanine directly alter the free energy barrier of the open to closed transition for S4. Mutations can either facilitate the relaxation of the voltage-sensor or increase the free energy barrier, depending on the size of the mutant. These results are confirmed by new experimental data that supports that a rigid, cyclic ring at the phenylalanine position is the determining rate-limiting factor for the voltage sensor gating process. / QC 20110616

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