The thesis deals with several aspects of monitoring of persistent organic contaminants (POPs) in biological matrices, for example choice of sample, sampling design, and statistical treatment of data both for temporal and spatial trends and for compliance towards a set target value. The efficiency has been evaluated through statistical power analyses. Contaminant data from more than 4 decades from the Swedish National Monitoring Programs for monitoring of contaminants in biota (marine, freshwater and human health), has been quantitatively evaluated both temporally and spatially and for compliance. The aim was also to evaluate the suitability of different matrices, i.e. herring (Clupea harengus), guillemot (Uria aalge) egg, cod (Gadus morhua), perch (Perca fluviatilis), eelpout (Zoarces viviparous), blue mussel (Mytilus edulis), pike (Esox lucius), Arctic char (Salvelinus alpinus) and human milk, for monitoring of POPs with the overall aim to improve the assessment within monitoring programs. The results show that variation can be reduced by using pooled samples including more specimens but fewer chemical analyses, which in turn generate a higher statistical power to a lower cost, at least in cases where the cost of collection and sampling is considerably lower than the cost of chemical analysis. However, there are also a number of advantages using individual samples, such as information of sample variance and maximum value, which allows the choice of an appropriate central measure and direct adjustment of confounding factors. Generally, the levels of polychlorinated biphenyls (PCBs), dichlorodiphenyltrichloroethanes (DDTs), hexachlorocyclohexanes (HCHs) and hexachlorobenzene (HCB) have decreased both in marine and freshwater biota but concentrations are still higher in the Baltic compared to e.g. the North Sea. The levels of dioxinlike-PCBs and polychlorinated dibenzo-p-dioxins/polychlorinated dibenzofurans (PCDD/Fs) have decreased in human milk over time, but not to the same extent in fish and guillemot egg from the Baltic and the freshwater environment. This may be explained by the dietary advice developed by the Swedish Food Administration with the goal that girls, reproductive aged, and pregnant women should eat less food containing high levels of PCDD/Fs. Thus the levels in milk could continue to decrease at the same rate although the temporal trend in the environment has slowed down or leveled out. The most essential regarding the choice of species and matrices for contaminant monitoring, is that the species and organ fit the purpose of the monitoring.

L’objectif principal de ce travail était de réaliser une étude écotoxicologique du complexe lac Ichkeul-lagune de Bizerte. Un recensement des pesticides agricoles les plus utilisés dans le bassin versant agricole a été effectué afin de déterminer les pesticides les plus problématiques. Le recensement effectué auprès des agriculteurs, des revendeurs de produits phytosanitaires et le commissariat régional de développement agricole de Bizerte a permis d’identifier les molécules les plus utilisées au niveau des zones agricoles du bassin versant du complexe lac Ichkeul – lagune de Bizerte: l’iodosulfurone, le mésosulfurone, le 2,4D, le glyphosate et le fénoxaprop comme matières actives des herbicides ; le tébuconazole et l’époxiconazole comme fongicide et la deltaméthrine matières active des insecticides. Ensuite, les concentrations en pesticides, HAP et PCB ont été déterminées. Les résultats ont montré une contamination au niveau de certains sites du complexe. Les stations situées dans la lagune de Bizerte ont des teneurs en HAP dépassant les limites tolérées. Les concentrations en pesticides dépassent les normes au niveau de quelques sites du lac Ichkeul. Enfin, l’impact de ces polluants sur les communautés microbiennes et la densité de nématodes a été déterminé. La CCA combinant les résultats des analyses chimiques et les données T-RFLP des communautés bactériennes met en évidence que les communautés bactériennes du lac sont influencées parles pesticides alors que celles de la lagune sont influencées par les HAP. La répartition des T-RFs montre la présence de T-RFs spécifiques dans les sites contaminés : le T-RF 114 bp caractérise le site le plus contaminé en pesticide, les microorganismes associés à ce T-RF correspondent probablement à des microorganismes résistants aux pesticides et capables de les dégrader. La composition des communautés bactériennes a été déterminée par pyroséquençage 454 sur les sites les plus représentatifs : le moins contaminé du complexe, le plus contaminé en HAP, le plus contaminé en pesticides et un site présentant une contamination multiple HAP-Pesticides. L’impact de la présence des pesticides sur la densité des nématodes libres marins a été étudié. L'analyse taxinomique des données de pyroséquençage regroupe les séquences dans 44 embranchements différents. En général, Proteobacteria étaient l’embranchement le plus dominant avec une prédominance de Gammaproteobacteria, Alphaproteobacteria et deltaproteobacteria dans les sédiments. Les communautés bactériennes des quatre sites ont 211 OTU commun. Le lac Ichkeul a été caractérisé par 219 OTU spécifique et la lagune de Bizerte 235 OTU. Le Site 2, le plus contaminé en pesticides présente l’abondance la plus élevée en nématodes libres marins. / The main objective of this work was to conduct an ecotoxicological study of the complex Ichkeul Lake-Bizerta lagoon. A survey of the most used agricultural pesticides in the watershed of the complex was conducted to determine the most problematic compounds. The survey of pesticides use with farmers, dealers of pesticides and the Regional Commissioner for Agricultural Development Bizerte has helped to identify the most used pesticides in agricultural areas of the watershed of the complex Ichkeul Lake-Bizerta lagoon: iodosulfuron, the mesosulfurone, 2,4D, glyphosate and fenoxaprop as herbicides active materials, tebuconazol epoxiconazol as fungicide active materials and deltamethrin as insecticides. Then, the concentrations of pesticides, PAHs and PCBs were determined in the sediment of the complex. The results showed a contamination of some complex sites. Stations located in the lagoon of Bizerte have a level of PAH in excess of permissible limits. Pesticide concentrations exceed the standards at some sites from the Ichkeul Lake. Finally, the impact of these pollutants on microbial communities and nematode density was determined. CCA combines the results of chemical analyzes and T-RFLP data of bacterial communities shows that the bacterial communities of the lake are influenced by pesticides while those of the lagoon are influenced by PAHs. The distribution of T-RFs showed the presence of specific T-RFs in contaminated sites: the T-RF 114 bp characterizes the most contaminated site in pesticides, microorganisms associated with the T-RF are probably microorganisms resistant to pesticides and capable of degrading this pollutant. The composition of bacterial communities was determined by 454 pyrosequencing of the most representative sites: the least contaminated of the complex, the most contaminated by PAH, the most contaminated by pesticides and a site with multiple PAH-pesticides contamination. The impact of the presence of pesticides on the density of free living marine nematodes was studied. The taxonomic analysis of the pyrosequencing data grouped the sequences into 44 different phyla. In general, Proteobacteria were the most dominant phyla with predominance of Gammaproteobacteria, Alphaproteobacteria and Deltaproteobacteria within the sediments. Besides Proteobacteria, there are a number of sequences affiliated to the following major phyla detected in all four sites: Chloroflexi, Bacteroidetes, Nitrospirae, Planctomycetes, Actinobacteria, Gemmatimonadetes, Firmicutes, Cyanobacteria, Spirochaetes, Acidobacteria. The bacterial communities of the four sites shared 211 common OTUs. The Lake Ichkeul was characterized by 219 specific OTUs and the Bizerta lagoon by 235 OTUs. Site 2, the most contaminated by pesticides has the highest abundance of free living marine nematodes.

Les activités anthropiques ainsi que des phénomènes naturels sont à l’origine de risques avérés pour l’environnement. L'Indonésie est un pays archipélagique qui contient de nombreuses îles et régions côtières, où la croissance exponentielle des activités anthropiques a exposé l’environnement indonésien à de graves détériorations au cours des dernières décennies. Cette étude vise à explorer (qualitativement et quantitativement) les niveaux de contamination des sédiment de surface et du biote (P. Viridis, P. erosa,) au travers de deux sites atelier : la baie de Jakarta et la lagune de Segara Anakan (Java, Indonésie).Les méthodes de préparation des échantillon (extraction par solvant puis purification par chromatographie d’adsorption) suivies de l’analyse des extraits par GC/MS/MS ont été développées et qualifiées (linéarité, spécificité, reproductibilité).Les n-alcanes, HAP, PCBs et OCs sont détectés à des teneurs pouvant atteindre respectivement 1935 µg/kgPS, 916 µg/kg PS, 116,49 µg/kg PS, et 16,70 µg/kg PS, dans des sediments et 1739 µg/kg PS des HAPs et 24,79 µg/kg PS des OCs dans le biote. Les hydrocarbures, comme les HAPs sont majoritairement d’origine pétrolière (fuites, transport utilisation) même si la contribution pyrolytique est toujours présente.L’évaluation du risque environnemental a été réalisés pour les HAP, PCBS et et les OCs en utilisant les lignes directrices de la qualité des sédiments (RQS). Ces données peuvent servir de référence de base dans le cadre du programme de gestion intégrée des bassins versants impliquant la biodiversité, l'écologie de l'eau douce, et l'activité économique dans le domaine de cette étude. / Environmental problems can increase due to anthropogenic activities or natural phenomena. Indonesia is an archipelagic country that consists of many islands and coastal regions, where the growth of anthrophogenic and natural activities has exhibited severe environmental degradation in the past few decades. This study aims to explore (both qualitatively and quantitatively) the extent and sources of organic contaminants, i.e., n-alkanes in surface sediments; PAHs, PCBs and OCs in sediments and mussels, P. viridis from Jakarta Bay, North Jakarta, and P. erosa from the Segara Anakan Lagoon. Each protocol was continued with qualitative and quantitative analysis by GC-QQQ(triple-quadropole)/MS. Matrix interferences have been evaluated with proper samples with suitable yield of extraction and analysis. The n-alkanes, PAHs, PCBs and Organochlorin pesticides are detected in the highest levels in sediments, respectively 1935 µg/kg dw, 916 µg/kg dw, 116,49 µg/kg dw, and 16,70 µg/kg dw. In addition, the highest levels of PAHs (1739 µg/kg dw) and OCs levels (24,79 µg/kg dw) were found in biota. The source of hydrocarbons source, such the PAHs were generalelly petroleum source (transport utilization) although the pyrolytic are still present in sediments and biota. Environmental risk assessment from sediment quality guidelines (SQGs) were used to evaluate the probability risk in marine environments. Besides SQGs, sediments and mussels also in regard to the extent of the PAHs, PCBs and OCs (i.e. pp’-DDE) have been compared to other studies conducted at some polluted sites.

The conservation of marine mammals relies on the knowledge of species ecology in order to assess the impacts of anthropogenic activites and make appropriate species management decisions. Blubber biopsies are a relatively non-invasive sampling protocol to provide ecological information; two particular uses are for dietary analysis via fatty acid signature analysis (FASA) and investigating the uptake of organochlorine (OC) and polychlorinated biphenyl (PCB) environmental contaminants. Blubber composition and structure may vary according to body site and depth due to its dynamic functioning. This may result in the vertical stratification and heterogenous distribution of blubber FAs, OCs and PCBs between body sites, giving variable interpretations of diet and contaminant levels depending on biopsy sample site and depth. The aim of this thesis is to determine the FA distribution of blubber from two body sample sites (dorsal pelvic and ventral thoracic) currently used for FASA of the New Zealand sea lion, Phocarctos hookeri (NZSL) and to determine the level of OCs and PCBs in the blubber of healthy NZSLs for comparison to diseased NZSLs recorded in the 1997/98 epidemic. Blubber samples were collected from 29 by-caught NZSLs incidentally captured by the squid fishery around the Auckland Islands (50º42’S, 166º5’E) during the years 2005 to 2007 (not all NZSLs were able to be analysed for each chapter). Full blubber cores from both sample sites were collected from 18 NZSLs. Both sites showed a relative homogeneity of FA profiles, indicating the similar deposition and mobilisation of FAs at the two sample sites. To determine if FA stratification occurred, full blubber cores from both sample sites of 20 NZSLs were divided into inner and outer halves. Both sites displayed the same pattern of vertical stratification or biochemical layering of FAs between the two divisions, indicating that stratification of FAs occurs in the blubber of the NZSL. A range of OCs and PCBs were then determined in full thoracic blubber cores of seven NZSLs. The levels were higher than those previously recorded in NZSLs affected by disease during a 1997/98 epidemic. The SPCB in NZSLs was 0.034-0.192 mg/kg lipids, below the suggested threshold of 17 mg/kg for adverse health affects in marine mammals. From the results of this study I can support current blubber biopsy sampling techniques for FASA in NZSL. Obtaining full blubber cores from either the thoracic or pelvic sample site will give a comparable interpretation of diet. The low levels of blubber OCs and PCBs suggest a minor role of contaminants acting as a possible causative agent toward disease outbreaks in the NZSL. This research provides important information for developing correct and consistent blubber sampling techniques for NZSL and other pinniped species. This will ensure more accurate interpretations of ecological information obtained from blubber biopsies and therefore improved species management and conservation decisions that may be based on such research.

<p>The polychlorinated biphenyls (PCBs) comprise a group of 209 congeners varying in the number of chlorine atoms and substitution patterns. These compounds tend to be biomagnified in foodwebs and have been shown to induce an array of effects in exposed organisms. The structural characteristics of the PCBs influence their potency as well as mechanism of action. In order to assess the biological potency of these compounds a multi-step quantitative structure-activity relationship (QSAR) procedure was used in the project described in this thesis.</p><p>The ultraviolet absorption (UV) spectra were measured for all 209 PCBs, and digitised for use as physico-chemical descriptors. Interpretations of the spectra using principal component analysis (PCA) showed the number of ortho chlorine atoms and para-para substitution patterns to be significant. Additional physico-chemical descriptors were derived from semi-empirical calculations. These included various molecular energies, the ionisation potential, electron affinity, dipole moments, and the internal barrier of rotation. The internal barrier of rotation was especially useful for describing the conformation of the PCBs on a continuous scale.</p><p>In total 52 physico-chemical descriptors were compiled and analysed by PCA for the tetra- to hepta-chlorinated congeners. The structural variation within these compounds was condensed into four principal properties derived from a PCA for use as design variables in a statistical design to select congeners representative for these homologue-groups. The 20 selected PCBs have been applied to study structure-specific biochemical responses in a number of bioassays, and to study the biomagnification of the PCBs in various fish species.</p><p>QSARs were established using partial least squares projections to latent structures (PLS) for the PCBs potency to inhibit intercellular communication, activate respiratory burst, inhibit dopamine uptake in synaptic vesicles, compete with estradiol for binding to estrogen receptors, and induce cytochrome P4501A (CYP1A) related activities. By the systematic use of the designed set of PCBs the biological potency was screened over the chemical domain of the class of compounds. Further, sub-regions of highly potent PCBs were identified for each response measured. For risk assessment of the PCBs potency to induce dioxin-like activities the predicted induction potencies (PIPs) were calculated. In addition, two sets of PCBs were presented that specifically represent congeners of environmental relevance in combination with predicted potency to induce estrogenic and CYP1A related activities.</p>

Polychlorinated dibenzo-p-dioxins (PCDDs) and dibenzofurans (PCDFs), two groups of struc-turally related chlorinated aromatic hydrocarbons, generally referred to as “dioxins” are of great concern due to their extreme toxicity and presence in all compartments of the environment. Since they occur at very low levels, their analysis is complex and challenging, and there is a need for cost-efficient, reliable and rapid analytical alternatives to the expensive methods in-volving use of gas chromatography high-resolution mass spectrometry (GC-HRMS). It is im-portant to routinely monitor food and feed items to detect contaminations at an early stage. For the regulation of dioxins and dioxin-like PCBs in food and feed according to current legis-lation, large numbers of samples have to be analysed. Furthermore, soils at many industrial sites are also contaminated with dioxins and need remediation. In order to optimize the cost-efficiency of reclamation activities it is important to acquire information about the levels and distribution of dioxins in the contaminated areas. The aim of the studies underlying this thesis was to investigate the potential of comprehen-sive two-dimensional gas chromatography with a micro-electron capture detector (GC × GC-µECD) as a cost-effective method for analysing dioxins and dioxin-like PCBs in food, feed, fly ash and contaminated soils. Quantification studies of dioxins and dioxin-like PCBs were con-ducted and results were compared with GC-HRMS reference data. Generally, there was good agreement between both the congener-specific results and data expressed as total toxic equiva-lents (TEQs). The developed GC × GC-µECD method meets the European Community (EC) requirements for screening methods for control of dioxins and dioxin-like PCBs in food and feed. The presented results also indicate that GC × GC-µECD has potential to be used as a routine method for the congener-specific analysis of 2,3,7,8-PCDD/Fs and dioxin-like PCBs in matrices such as food and feed, fly ash and soil. However, to fully exploit the potential of the GC × GC-µECD technique, it should be combined with a fast and cost-efficient sample preparation procedure. Therefore, a number of certified reference materials (CRMs) were extracted using a new shape-selective pressurized liquid extraction technique with integrated carbon fractionation (PLE-C), and the purified extracts were analysed for PCDD/Fs using GC × GC-µECD. The results compared well with the certified values of a fly ash and a sandy soil CRM, but they were much too high for a com-plex clay soil CRM. It was concluded that this combination of techniques was very promising for screening ash and highly permeable soils. Further assessments and method revisions are still required before GC × GC-µECD can be used on a routine basis, and available software packages need to be refined in order to accelerate the data-handling procedures, which currently restrict the sample throughput.

The polychlorinated biphenyls (PCBs) comprise a group of 209 congeners varying in the number of chlorine atoms and substitution patterns. These compounds tend to be biomagnified in foodwebs and have been shown to induce an array of effects in exposed organisms. The structural characteristics of the PCBs influence their potency as well as mechanism of action. In order to assess the biological potency of these compounds a multi-step quantitative structure-activity relationship (QSAR) procedure was used in the project described in this thesis. The ultraviolet absorption (UV) spectra were measured for all 209 PCBs, and digitised for use as physico-chemical descriptors. Interpretations of the spectra using principal component analysis (PCA) showed the number of ortho chlorine atoms and para-para substitution patterns to be significant. Additional physico-chemical descriptors were derived from semi-empirical calculations. These included various molecular energies, the ionisation potential, electron affinity, dipole moments, and the internal barrier of rotation. The internal barrier of rotation was especially useful for describing the conformation of the PCBs on a continuous scale. In total 52 physico-chemical descriptors were compiled and analysed by PCA for the tetra- to hepta-chlorinated congeners. The structural variation within these compounds was condensed into four principal properties derived from a PCA for use as design variables in a statistical design to select congeners representative for these homologue-groups. The 20 selected PCBs have been applied to study structure-specific biochemical responses in a number of bioassays, and to study the biomagnification of the PCBs in various fish species. QSARs were established using partial least squares projections to latent structures (PLS) for the PCBs potency to inhibit intercellular communication, activate respiratory burst, inhibit dopamine uptake in synaptic vesicles, compete with estradiol for binding to estrogen receptors, and induce cytochrome P4501A (CYP1A) related activities. By the systematic use of the designed set of PCBs the biological potency was screened over the chemical domain of the class of compounds. Further, sub-regions of highly potent PCBs were identified for each response measured. For risk assessment of the PCBs potency to induce dioxin-like activities the predicted induction potencies (PIPs) were calculated. In addition, two sets of PCBs were presented that specifically represent congeners of environmental relevance in combination with predicted potency to induce estrogenic and CYP1A related activities.

The thermal formation of polychlorinated dibenzo-p-dioxins (PCDDs), dibenzofurans (PCDFs), biphenyls (PCBs), and naphthalenes (PCNs) is a major problem in waste incineration. Ideally, rather than relying on air cleaning systems and treatment techniques, their formation should be minimized or, if possible eliminated. The work presented in this thesis was conducted to obtain a deeper understanding of the thermal formation of PCDDs, PCDFs, PCBs, and PCNs during incineration using a 5 kW laboratory scale incinerator and two artificial wastes that were designed to reflect regional differences in waste composition. The first part of the thesis focuses on the validation of a recently-developed flue-gas sampling probe with enhanced cooling capabilities. Artifact formation of PCDDs and PCDFs can occur during the sampling of hot flue gases if the cooling is insufficient. The new probe was successfully used to collect samples at 700 °C without biasing the measured POP levels. The thermal formation of PCDDs, PCDFs, PCBs, and PCNs in the post-combustion zone of the incinerator was then studied by collecting flue gas samples at 400 °C, 300 °C, and 200 °C during the incineration of the two artificial wastes. Highly chlorinated POPs were formed in larger quantities when burning the waste with the higher content of metals and chlorine, which suggests that high metal levels in the waste favor the chlorination of less chlorinated POPs or otherwise facilitate the formation of highly chlorinated polyaromatics, possibly via the condensation of highly chlorinated phenols. The concentrations of these pollutants and the abundance of highly chlorinated homologues increased as the flue gas cooled. Fly ash particles play an important role in thermal POP formation by providing essential elements (carbon, chlorine, etc.) and catalytic sites. The chemical and mineralogical properties of fly ash samples were studied by X-ray diffraction (XRD), Fourier Transform Infrared (FTIR), Scanning Electron Microscopy/Energy Dispersive X-ray (SEM/EDX), and X-ray photoelectron spectroscopy (XPS) to determine their impact on thermal POP formation. Orthogonal Partial Least Squares (OPLS) modeling was used to identify correlations between the observed POP distributions and the physicochemical data. This investigation provided new insights into the impact of fly ash chemistry on thermal POP formation. In addition, the POP isomer distribution patterns generated during waste combustion were examined. These patterns are used to “fingerprint” mechanisms of POP formation. It was found that wastes containing large quantities of metals and chlorine favored the formation of highly chlorinated homologues including the very toxic 2,3,7,8-congeners. The data suggest that reducing fly ash emissions might increase the SO2 content of the flue gas and thereby suppress the Deacon process and the formation of harmful highly chlorinated aromatic species.

South Africa ratified the Stockholm Convention (SC), which became legally binding on 17 May 2004. This Convention targets 12 particularly toxic persistent organic pollutants (POPs) for virtual elimination. The Convention also requires parties to reduce the release of organochlorine pesticides and the intentionally- and unintentionally-produced POPs such as dioxins, furans and polychlorinated biphenyls (PCBs) (referred to as dioxin-like chemicals). Dioxins are a heterogeneous mixture of chlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) congeners. These substances were never intentionally produced but are produced as by-products of industrial processes (such as metallurgical processes and bleaching of paper pulp). They can also be formed during natural processes such as volcanic eruptions and forest fires. The largest contributor to releases of PCDD/Fs in the environment is incomplete combustion from waste incinerators leading to the unintentional production of these compounds. Polychlorinated biphenyls (PCBs) are used in transformers and capacitors, but can also be formed unintentionally during industrial and thermal processes. Dioxin-like chemicals (PCDD/Fs and/or PCBs) are classified as persistent because of the following characteristics: lipophilicity and hydrophobicity; resistance to photolytic, chemical and biological degradation and they are able to travel long distances. As South Africa is a semiarid region, POPs will be less prone to travel here because these substances favour colder regions with high soil organic matter. Fish, predatory birds, mammals (including humans) absorb high concentrations of POPs through the process of bio-concentration, leading to bio-accumulation of these substances in the fatty tissue. PCDD/Fs occur as unwanted trace contaminants in air, water, land, in residues and products (such as consumer goods e.g. paper and textiles). The distribution of these chemicals into various matrices is problematic since they cause damage to the environment and human health. These chemicals pose a threat to human health when found in high concentrations that may lead to acute hepatoxicity and dermal toxicity (chloracne). Long-term exposure to low concentrations of these substances might lead to chronic effects such as reproductive problems and carcinogenicity. Since ferrous and non-ferrous metal production is a source of dioxin-like chemicals, a platinum mine in the Limpopo Province, South Africa, was selected for this investigation. The aim of the study was to determine if there are dioxin-like chemicals associated with platinum mining and processing, and if the H4IIE reporter gene bio-assay could be used to semi-quantify and assess the potencies of the complex environmental and process samples by determining their Toxic Equivalency Quotients (TEQ). The implications of the sources to the formation of dioxin-like chemicals regarding the SC were investigated and recommendations were made to improve this study. Samples were collected from tailings dams, woodchips, a dumpsite and slag from the smelter at Union Section. Samples were extracted with the Soxhlet apparatus using hexane as solvent. The percentage total organic carbon (%TOC) was determined for each sample to normalise the data. The method used was the Walkley-Black method. In determining the TEQ of each sample, the H4IIE luc cell line was used. The cells of the H4IIE luc line are genetically modified rat hepatoma cells stably transfected with a luciferase firefly gene. The luciferase gene is activated by the presence of dioxin-like compounds and the concentration of the enzyme is measured as relative light units (RLUs). The amount of RLUs is directly proportional to the dioxin load in the extract. This method is rapid, cost and time-effective in determining the TEQ when compared to chemical analysis. The TEQ2o-valuesin the various samples, as determined with the H4IIE luc cell line, ranged from 0.007 ngTEQ/kg to 54.06 ngTEQ/kg. Thermal processes at the smelter, sorption of hydrophobic organic compounds (HOCs) to soil and tailings, and external sources such as anthropogenic activities contributed to high TEQ2o-values. Climatic conditions, wind, precipitation, and solubility of HOCs into surfactants lead to low TEQ20. The smelter at Union Section had a very high TEQ20of 44.62 ngTEQ/kg compared to Impala Platinum mine (5.15 ngTEQ/kg). This implies that workers at Union Section are possibly exposed to low and high concentrations of dioxin-like chemicals. Long-term exposure to these compounds could lead to bio-accumulation in the fatty tissue of the mine workers, leading to chronic effects such as reproductive problems and cancer. The air emission of the furnace at the smelter was 0.03 gTEQ/annum and the release of the PCDD/Fs into the slag was 0.60 gTEQ/annum. By effectively managing the smelter it is possible to reduce the TEQ. The TEQ of each sample increased due to normalising the data. The normalised TEQ20 ranged from 0.94 ng TEQ/kg to 42497.48 ngTEQ/kg. Dioxin-like chemicals are present on a platinum mine, but at varying quantities and the effects of these compounds might be detrimental to the environment and the workers at the platinum mine. Further analyses of the health impacts associated with the platinum mine are needed. The H4IIE reporter gene bio-assay could be used to effectively determine the TEQ of each sample. Although this investigation has identified the formation and presence of dioxin-like chemicals at certain stages of mining and processing, not all of the processes were investigated. Some of these processes have the potential to add, and even destroy, these chemicals, affecting potential human exposure and amounts released to the environment. This, however, requires further investigation. The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. / Thesis (M. Environmental Science)--North-West University, Potchefstroom Campus, 2006.

Farmed Southern Bluefin Tuna (SBT) (Thunnus maccoyii) is an important export product for South Australia (SA). It is exported to Japan, China, Korea and the United States for the sushi and sashimi markets. The primary purpose of SBT farming in SA is to fatten wild-caught juvenile fish (2-4 years of age with initial mean weights between 12-20 kg) over a period of approximately five months by feeding a selection of baitfish types. Farmers, farm managers and consumers of SBT all have an interest in managing chemical residues that have the potential to biomagnify in the fatty tissue of the farmed SBT fillets. Of particular interest are chemical residues of polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins / dibenzofurans (PCDD/Fs). This research presents the investigations and experimental validation of a predictive model that can be used to address the levels of residues in the fillets of farmed SBT at harvest from feeding (as the source) when applied to SBT aquaculture. An additional industry-focussed aim of this research was to determine if a Longer Term Holding (LTH) farming period, with a duration of an extra 12 months after a typical farming period of approximately five months, could produce SBT with higher condition index (CI) and lipid content, while keeping levels of PCBs and PCDD/Fs low, compared to the typical farming period. The justification for this research is that an adequate quantitative model is essential to help industry achieve targeted concentrations in the final fillet product by making scientific-based decisions on baitfish selection (baitfish strategies for the feeding of SBT), and longer term, to confidently demonstrate to local markets and importing countries that Australia is actively managing levels of PCBs and PCDD/Fs in farmed SBT, to ensure a high quality and safe product is delivered to the consumer. The novelty of this research is underpinned by four integrated stages, and the criteria for an adequate model established. The important criteria included: accurate predictions versus observed data demonstrated through the analysis of residual plots, potential physiological interpretation of model coefficients, parsimony – the model should be as simple as possible (but no simpler) and that the model should be easy to use. Firstly, a logical starting point was the development of a risk framework for residues in SBT. The developed framework was based on conventional principles of microbiological risk assessment highlighted in Codex Alimentarius. The risk framework consists of five governing principles: hazard identification, hazard characterisation, exposure assessment, risk characterisation and model validation. The advantages of the risk framework is that it provides a systematic research approach and permits information to be handled unambiguously, especially important for the niche SBT industry where chemical residue research is carried out for the first time. Secondly, because of a lack of available scientific data in context of this research, commercial-scale experimental field data for levels of PCBs and PCDD/Fs in typical farmed SBT as affected by feeding and growth were collected over 17 months at seven time intervals from Farm Delta Fishing Pty Ltd in 2005/06 (n = 50). Field data from another commercial company, Farm Alpha Fishing Pty Ltd, was collected over the typical farming period specific to this company, spanning 15 weeks at three time intervals in 2006, for validation work (n = 15). The data obtained from Farm Delta Fishing Pty Ltd revealed that whole weight of farmed SBT increased from 18.5 kg to 30.3 kg for a typical farming period, and subsequently to 41.0 kg by the end of the LTH farming period. A maximum mean CI of 24.0 ± 0.5 kg.m⁻³ and a maximum mean lipid content of 17.6 ± 0.5% was achieved at the third time interval of the typical farming period, for the baitfish types and ratios used as feed. There were no significant differences in the CI and lipid between the final harvests of the typical farming and LTH periods, i.e. even after an additional 12 months of farming. PCB and PCDD/F concentrations, however, increased between the final harvests of the typical farming and LTH periods. The data indicated that a typical farming period was sufficient to achieve a maximum CI and lipid content with lower concentrations of PCBs and PCDD/Fs in the fillets relative to the LTH farming period. For the third stage of this research, a quantitative model was synthesised and applied to the PCB and PCDD/F (2,3,7,8-TeCDF) data detected in farmed SBT fillets. Assimilation efficiencies for PCBs and 2,3,7,8-TeCDF in the fillets of SBT were obtained. An assimilation efficiency, or percentage retention (efficiency expressed as a percentage), in the fillet of SBT is a measure of the uptake of a chemical residue from food (baitfish) to the SBT fillet. For the WHO-PCBs, assimilation efficiencies based on SBT fillets ranged between 19.1 – 35.3 % with the exception of PCB 169. The highest assimilation efficiency of 35.3 %, with a range of 30.4 – 40.3 % (at the 95 % confidence level) was attributed to the most toxic PCB congener, PCB 126. An assimilation efficiency of 39.2 % was determined in SBT fillets for the congener 2,3,7,8-TeCDF, which was higher than the assimilation efficiencies determined for the WHO-PCB congeners. A residual plot as predicted value versus observed value indicated that the predictive model was neither under- or over-parameterised. However, when the predictive model was assessed against the data set from Farm Alpha Pty Ltd, the model over-predicted the actual PCB and PCDD/F concentrations. The over-prediction is attributed to possible overfeeding of SBT farmed by Farm Alpha Fishing Pty Ltd. From a food safety point of view, in the absence of ideal predictions because of a lack of ideal validation data sets, an over-prediction instead of under-prediction is preferred. In the fourth stage, the practical application of the predictive model was demonstrated. Because SBT fillets are retailed as tissue group-specific, i.e. akami (low fat), chu-toro (medium fat) and otoro (high fat) fillets, PCB and PCDD/F analyses were carried out on the three tissue groups for selected SBT (n = 7). Dietary modelling on SBT consumption in humans was carried out using findings from the predictive model and tissue-specific data. The baitfish strategy employed for the feeding of farmed SBT consequently affects dietary exposure to SBT consumers. Exposure to PCBs and PCDD/Fs is approximately seven times lower for the consumption of a skin-free, boneless akami fillet than for a comparable otoro fillet of the same size. This dietary exposure assessment accounted only for consumption of SBT tissue-specific fillets. The experimental field study and modelling work on PCB and PCDD/F concentrations in farmed SBT (fillets) outlined in this thesis importantly directs the need to re-evaluate a specific model to better cater for SBT farming practices where SBT fillets are produced for human consumption. Because conditions that normally pertain to commercial farming of wild-caught fish were studied, findings should be of interest to industries where other species of fish (for food) are farmed in sea-cages in the open ocean. / http://proxy.library.adelaide.edu.au/login?url= http://library.adelaide.edu.au/cgi-bin/Pwebrecon.cgi?BBID=1342453 / Thesis (Ph.D.) -- University of Adelaide, School of Chemical Engineering, 2008