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Effects of Low Dose Aspirin (81 mg) on Proliferating Cell Nuclear Antigen and Amaranthus Caudatus Labeling in Normal-Risk and High-Risk Human Subjects for Colorectal CancerKrishnan, Koyamangalath, Aoki, Toshihiro, Ruffin, Mack T., Normolle, Daniel P., Boland, C. Richard, Brenner, Dean E. 20 April 2004 (has links)
Epidemiological, experimental, and clinical observations provide support for a colorectal cancer chemopreventive role for aspirin. We have evaluated the effects of aspirin on proliferation biomarkers in normal-risk and high-risk human subjects for colorectal cancer. Colorectal biopsies were obtained at baseline and at 24h after 28 daily doses of 81mg of aspirin from 13 high-risk and 15 normal-risk subjects for colorectal cancer. We evaluated aspirin's effects on proliferating cell nuclear antigen (PCNA) immunohistochemistry and epithelial mucin histochemistry using the lectin, Amaranthus caudatus agglutinin (ACA) in crypt sections from rectal biopsies. The baseline whole crypt PCNA LIs differed significantly between normal-risk and high-risk subjects. PCNA LIs are not affected by 28 days of aspirin at 81mg daily. ACA LIs are decreased by 28 days of aspirin at 81mg daily in both normal-risk and high-risk subjects. Aspirin's effects on ACA LIs may have mechanistic and biological implications that deserve further attention. PCNA and ACA LIs are not useful as proliferation biomarkers for aspirin's chemopreventive activity in morphologically normal human colorectal mucosa.
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Senecio serratuloides var. in wound healing: efficacy and mechanistic investigations in a porcine wound modelGould, Alan Nicolas 16 September 2015 (has links)
A dissertation submitted to the Faculty of Health Sciences, University of the
Witwatersrand, in fulfilment of the requirements for the degree of Doctorate of
Philosophy. / Senecio serratuloides is widely used for wound healing in South Africa but minimal
information regarding its efficacy is available. Furthermore toxic pyrrolizidine
alkaloids may be present. The following investigation sought firstly to evaluate the
efficacy and safety of Senecio serratuloides in a porcine wound model; secondly to
assess for a potential mechanism and finally isolate and identify fractions in in-vitro
assays.
Assessment of Efficacy and Safety
Materials and Methods: Deep partial thickness and full thickness wounds were
created on 9 pigs. Treatment included an occlusive dressing (negative control),
activated carbon, or the Senecio preparation. Wounds were monitored using
photographic documentation, pH measurement and histological analysis (skin
thickness and collagen content). Toxicity was monitored on blood and liver samples.
Results and Discussion: Efficacy of Senecio serratuloides was established with a
significantly thicker epidermis, maximal at day 7 post-operative, 2 days before the
controls. Effects on collagen content was negligible with no toxicity detected.
Mechanistic investigation
Materials and Methods: Wound fluid was analysed for IL-10, IL-12, IL-1β, IL-6, IL-8,
TNF-α using flow cytometry based assays. Tyrosine phosphorylation and cellular
proliferation was assessed using dual immunofluorescence staining.
Results and Discussion: IL-1β levels were significantly greater in the Senecio
treatment. Tyrosine phosphorylation increased to day 9 post-operative where it
stabilised in all groups. In the same period, cellular proliferation was sustained in the
Senecio treated wounds but not in the controls. Keratinocyte proliferation was
identified as the target for in-vitro assays.
Extraction, Isolation and Partial Identification using In-vitro Proliferation
Assays.
Materials and Methods: The plant was fractionated using solid phase extraction
cartridges. Keratinocytes were grown under standard conditions in 96-well plates.
Cellular proliferation was assessed spectrophotometrically using a resazurin dye
technique. Active fractions were analysed using gas chromatography and mass
spectrometry.
Results and Discussion: Identified fractions increased the rate of proliferation by 300-
400%. Potential lead compounds were identified. Importantly, pyrrolizidine alkaloids
could not be detected.
Conclusion
Senecio serratuloides is efficacious in treating deep partial thickness wounds without
inducing liver toxicity. Sustained keratinocyte proliferation linked to tyrosine
phosphorylation may be an underlying mechanism. Although successful, in-vitro
detection of active fractions requires further characterisation.
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Proliferative Activity and Aneuploidy in Pleomorphic Adenomas of the Salivary GlandsMartin, A R., Mantravadi, J., Kotylo, P K., Mullins, R., Walker, S., Roth, L. M. 01 March 1994 (has links)
We used flow cytometry in a retrospective study of pleomorphic adenoma and carcinoma arising in pleomorphic adenoma, using paraffin-embedded tissue, to assess the relationship among proliferative activity, ploidy, and recurrence or malignant transformation. Twenty-four specimens obtained from 22 tumors were acceptable for analysis (co-efficient of variation, < or = 7.0), including multiple samples from two tumors. Fourteen tumors (13 benign and one malignant) were diploid. Six tumors were aneuploid: four benign pleomorphic adenomas and two carcinomas arising in pleomorphic adenoma. Two tetraploid tumors were malignant recurrences from the same patient. Of the recurrent tumors (nine benign and four malignant), 54% were aneuploid. The highest S-phase fractions were observed in recurrent and malignant pleomorphic adenomas. Immunostaining with p105, a nuclear proliferation antigen, revealed increased proliferative activity in a majority of pleomorphic adenomas. Increased proliferative activity and aneuploidy occurred in benign pleomorphic adenomas.
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A Multi-Disciplinary Investigation of Essential DNA Replication ProteinsGadkari, Varun V. 03 August 2017 (has links)
No description available.
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"Análise imunohistoquímica do osteossarcoma em pacientes com e sem metástases e sua correlação prognóstica" / Immunohistochemistry analysis of osteosarcoma in patients with and without metastasis and its prognosis correlationAbadi, Marcia Datz 06 December 2005 (has links)
As proteínas p53, MDM-2, c-Kit, ErbB-2, PCNA e p-glicoproteína foram estudadas em 42 amostras de osteossarcoma ao diagnóstico, através da técnica de imunohistoquímica, e foram correlacionados estes achados com o prognóstico destes pacientes. O p-53 foi positivo em 23,1% (9/39), PCNA em 71,4% (25/35), p-glicoproteína em 40,5% (15/37), MDM-2 em 34,8% (8/23), c-kit em 67,6% (25/37) e ErbB-2 em 17,9% (7/39). Na análise univariada, a presença de metástases ao diagnóstico, a positividade de p53 e ErbB-2 influenciaram o prognóstico individualmente, entretanto, na análise multivariada, a presença de metástase ao diagnóstico revelou-se o único fator de prognóstico estatisticamente significante / We study, by imunohistochemistry technique, the proteins p53, MDM-2, c-Kit, ErbB-2, PCNA and p-glycoprotein in samples of osteosarcoma tumors at diagnosis and its correlation with the prognosis of this patients. The p-53 was positive in 23,1% (9/39), PCNA in 71,4% (25/35), p-glycoprotein in 40,5% (15/37), MDM-2 in 34,8% (8/23), c-kit in 67,8%(25/37) and ErbB-2 in 17,9% (7/39) of the samples. In the univariate analysis, the presence of metastasis at diagnosis, the positivity of p-53 and ErbB-2 influenced the prognosis individually, otherwise, in the multivariate analysis, the presence of metastasis at diagnosis was the only prgnostic factor statistically significant
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"Análise imunohistoquímica do osteossarcoma em pacientes com e sem metástases e sua correlação prognóstica" / Immunohistochemistry analysis of osteosarcoma in patients with and without metastasis and its prognosis correlationMarcia Datz Abadi 06 December 2005 (has links)
As proteínas p53, MDM-2, c-Kit, ErbB-2, PCNA e p-glicoproteína foram estudadas em 42 amostras de osteossarcoma ao diagnóstico, através da técnica de imunohistoquímica, e foram correlacionados estes achados com o prognóstico destes pacientes. O p-53 foi positivo em 23,1% (9/39), PCNA em 71,4% (25/35), p-glicoproteína em 40,5% (15/37), MDM-2 em 34,8% (8/23), c-kit em 67,6% (25/37) e ErbB-2 em 17,9% (7/39). Na análise univariada, a presença de metástases ao diagnóstico, a positividade de p53 e ErbB-2 influenciaram o prognóstico individualmente, entretanto, na análise multivariada, a presença de metástase ao diagnóstico revelou-se o único fator de prognóstico estatisticamente significante / We study, by imunohistochemistry technique, the proteins p53, MDM-2, c-Kit, ErbB-2, PCNA and p-glycoprotein in samples of osteosarcoma tumors at diagnosis and its correlation with the prognosis of this patients. The p-53 was positive in 23,1% (9/39), PCNA in 71,4% (25/35), p-glycoprotein in 40,5% (15/37), MDM-2 in 34,8% (8/23), c-kit in 67,8%(25/37) and ErbB-2 in 17,9% (7/39) of the samples. In the univariate analysis, the presence of metastasis at diagnosis, the positivity of p-53 and ErbB-2 influenced the prognosis individually, otherwise, in the multivariate analysis, the presence of metastasis at diagnosis was the only prgnostic factor statistically significant
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Regulation of replication dependent nucleosome assemblyGopinathan Nair, Amogh 04 1900 (has links)
Chez les cellules humaines, environ 2 mètres d'ADN est compacté dans le noyau cellulaire par la formation d'une structure nucléoprotéique appelée chromatine. La chromatine est composée d'ADN enroulé à la surface d'un octamère de core histones pour former une structure appelée nucléosome. La structure de la chromatine doit être altérée afin d'accéder à l'information génétique pour sa réplication, sa réparation et sa transcription. La duplication de la chromatine lors de la phase S est cruciale pour la prolifération et la survie des cellules. Cette duplication de la chromatine requière une ségrégation des histones parentales, mais aussi une déposition d'histones néo-synthétisées sur l'ADN. Ces deux réactions résultent en formation de chromatine dès qu'une quantité suffisante d'ADNest générée par la machinerie de réplication. De plus, en raison de conditions intrinsèques et extrinsèques, la machinerie de réplication est souvent confrontée à de nombreux obstacles, sous la forme de lésions à l'ADN qui interfèrent avec la réplication de l'ADN. Sous ces conditions, l'assemblage de nucléosomes et la synthèse d'histones sont étroitement régulées afin d'éviter la production d'un excès d'histones et leurs nombreuses conséquences nuisibles à la cellule.
"Chromatin Assembly Factor 1" (CAF-1) est responsable de la déposition initiale des molécules d'H3 et H4 derrière les fourches de réplication. Pour permettre sa fonction d'assemblage de chromatine, CAF-1 est localisée aux fourches de réplication en vertue de sa liaison à une protéine appelée Proliferating Cell Nuclear Antigen (PCNA). Cependant, le mécanisme moléculaire par lequel CAF-1 exerce sa function demeure mal compris.
Dans le deuxième chapitre de ma thèse, j'ai exploré comment CAF-1 se lie à PCNA d'une manière distincte des nombreux autres partenaires de PCNA. Grâce à nos collaborateurs, des études de crystallographie ont démontré que CAF-1 se lie à PCNA grâce à une interaction non-canonique entre le "PCNA Interaction Peptide" (PIP) de CAF-1 et une interaction de type cation-pi (π). Nous avons aussi montré qu'une substitution d'un seul acide aminé, unique au PIP de CAF-1, abolit son interaction avec PCNA et sa capacité d'assemblage de nuclésomes. Nous avons aussi montré que le PIP de CAF-1 est situé à l'extrémité C-terminale d'une très longue hélice alpha qui est conservée à travers l'évolution parmi de nombreux homologues de CAF-1. Nos études biophysiques ontmontré que cette longue hélice alpha forme des structures oligomériques de type "coiled-coil", ce qui suggère certains mécanismes pour dédier un anneau de PCNA à l'assemblage de chromatine et ce, en dépit des nombreux intéracteurs de PCNA présents aux fourches de réplication.
Dans le troisième chapitre de ma thèse, nos collaborateurs et moi-même avons étudié les mécanismes moléculaires par lesquels les cellules parviennent à maintenir un équilibre délicat entre la synthèse d'ADN et la synthèse d'histones et ce, même en présence de lésions à l'ADN qui interfèrent avec la réplication. Chez Saccharomyces cerevisiae, nous avons montré que les kinases de réponse au dommage à l'ADN, Mec1/Tel1 et Rad53, inhibent la transcription des gènes d'histones en réponse aux liaisons à l'ADN qui interfèrent avec la réplication. Nous avons montré que la répression des gènes d'histones induite par le dommage à l'ADN est médiée par une phosphorylation extensive de Hpc2, l'une des sous-unités du complexe "Histone Gene Repressor" (HIR). Hpc2 contient un domaine qui se lie à l'histone H3. À partir de la structure d'Hpc2, nous avons généré des mutants qui, d'après la structure, sont incapables de se lier à l'histone H3. Nos résultats montrent que l'accumulation d'histones en excès provoquée par le dommage à l'ADN entraîne la phosphorylation d'Hpc2 and la liaison de l'excès d'histone H3 à Hpc2. Ces résultats suggèrent que la répression transcriptionnelle des gènes d'histones induite par le dommage à l'ADN est médiée, du moins en partie, par une simple rétroaction négative impliquant la liaison des histones en excès à la sous-unité Hpc2 du complexe HIR. / In human cells, roughly 2 meters of DNA is compacted into the cell nucleus by the formation of a nucleoprotein complex called chromatin. Chromatin is composed of DNA wrapped around an octamer of core histones to form so-called nucleosomes. Chromatin structure needs to be altered to access genetic information for processes like replication, repair and transcription. Duplication of chromatin during S phase is vital for cell proliferation and viability. Chromatin duplication requires segregation of parental histones, but also deposition of newly synthesized histones onto DNA. This process results in packaging all of the synthesized DNA with histones to form nucleosomes as soon as enough nascent DNA has emerged from the replication machinery. Moreover, as a result of intrinsic and extrinsic conditions, the replication machinery often encounters DNA lesions that impede the continuous synthesis of DNA. Under these conditions, nucleosome assembly and histone synthesis are tightly regulated to prevent the production of an excess of histone proteins and their deleterious consequences.
Chromatin Assembly Factor-1 (CAF-1) performs the initial step in chromatin assembly by depositing newly synthesized histone H3-H4 molecules behind replication forks. In order to perform its chromatin assembly function, CAF-1 localizes to DNA replication forks by binding directly to a protein known as the Proliferating Cell Nuclear Antigen (PCNA). However, the exact molecular mechanism by which this is achieved remains poorly understood.
Through the second chapter of my thesis, I have explored how CAF-1 binds PCNA in a manner that is distinct from the numerous other binding partners of PCNA. With the help of our collaborators, crystallographic studies demonstrated that CAF-1 binds to PCNA by virtue of a non-canonical PCNA interaction peptide (PIP) and a cation-pi (π) interaction. We have also shown that a single amino acid substitution, unique to the PIP of CAF-1, disrupts its binding to PCNA and chromatin assembly activity. We found that the CAF-1 p150 PIP resides at the extreme C-terminus of a long alpha helix that is evolutionarily conserved among numerous homologues of CAF-1. Our biophysical studies showed that this long alpha-helix is capable of forming higher-order coiled coils, which suggests mechanisms to dedicate one PCNA ring for chromatin assembly despite the presence of multiple PCNA interactors at replication forks.
In the third chapter of this thesis, our collaborators and I have addressed the crucial molecular mechanisms by which cells maintain a delicate balance between DNA and histone synthesis despite the presence of DNA lesions that interfere with replication. In Saccharomyces cerevisiae, we showed that the DNA damage response kinases Mec1/Tel1 and Rad53 inhibit histone gene transcription when DNA lesions block DNA replication. We also showed that this repression is mediated by phosphorylation of the Hpc2 subunit of the Histone Gene Repressor complex (HIR). Hpc2 contains a domain that directly binds to histone H3. Interestingly, structure-based mutants of Hpc2 predicted to be incapable of binding H3 are defective in DNA damage-induced transcriptional repression of histone genes in response to DNA damage during replication. Our results indicate that the accumulation of excess histones caused by DNA damage during S phase triggers extensive phosphorylation of Hpc2 and binding of excess H3 to Hpc2. This suggests that DNA damage-induced repression of histone genes is mediated, at least in part, by a simple negative feedback triggered by binding of excess histones to the Hpc2 subunit of the HIR complex.
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