Submitted by Fabio Sobreira Campos da Costa (fabio.sobreira@ufpe.br) on 2017-04-27T13:00:02Z No. of bitstreams: 2 license_rdf: 1232 bytes, checksum: 66e71c371cc565284e70f40736c94386 (MD5) Tese_Euclides_Almeida_Fisica.pdf: 5907240 bytes, checksum: 503a5b57e757a03f24206d4d3d26032c (MD5) / Made available in DSpace on 2017-04-27T13:00:02Z (GMT). No. of bitstreams: 2 license_rdf: 1232 bytes, checksum: 66e71c371cc565284e70f40736c94386 (MD5) Tese_Euclides_Almeida_Fisica.pdf: 5907240 bytes, checksum: 503a5b57e757a03f24206d4d3d26032c (MD5) Previous issue date: 2012-07-30 / CNPQ / O principal objetivo deste trabalho foi investigar fenômenos ópticos ultrarrápidos em sistemas nanoestruturados empregando diferentes técnicas espectroscópicas não lineares, tanto no domínio do tempo quanto no domínio da frequência. Para fornecer uma base adequada que permita entender os experimentos feitos nessa tese, os princípios físicos das espectroscopias ópticas não lineares são apresentados. Inicialmente é apresentada uma descrição da função resposta não linear no domínio do tempo. A evolução temporal da polarização óptica, que gera o sinal espectroscópico, é descrita em detalhes usando uma teoria de perturbação diagramática. Técnicas ópticas não lineares são apresentadas, tais como eco de fótons, bombeamento-e-sonda e hole burning, assim como o comportamento dinâmico de um material pode ser interpretado a partir do sinal gerado. A técnica de mistura degenerada de quatro ondas com luz incoerente foi usada para investigar, pela primeira vez, o defasamento ultrarrápido de éxcitons em uma vitrocerâmica contendo nanocristais de niobato de sódio. O tempo de defasamento medido (T2 = 20 fs) indica qu empregada para investigar processos de transferência de carga em colóides com nanopartículas de TiO2 e rodamina 6G. O comportamento do sinal de depleção transiente é comparado com o observado para a rodamina livre suspensa em etanol. A análise dos resultados permitiu atribuir o comportamento de depleção à transferência de carga de estados excitados termalizados das moléculas de corante para a banda de condução do semicondutor e a transferência no sentido inverso do semicondutor para as moléculas. / The main objective of this work was the investigation of ultrafast optical phenomena in selected nanostructured systems employing different nonlinear spectroscopic techniques, either in the time or the frequency domain. To provide an appropriate background to understand the performed experiments the principles of nonlinear optical spectroscopies are presented. Initially a description of the nonlinear optical response function in the time domain is given. The time evolution of the optical polarization, that gives rise to the spectroscopic signal, is described in detail using a diagrammatic perturbation theory. Nonlinear optical techniques are discussed such as photon echoes, pump-and-probe and hole-burning, as well as how the dynamical behavior of a material can be interpreted from the generated signals. The degenerate four-wave mixing technique with incoherent light was used to investigate for the first time the ultrafast dephasing of excitons in a glass-ceramic containing sodium niobate nanocrystals. The short dephasing time measured (T2 = 20 fs) indicates that different dephasing channels contribute for the excitonic dephasing, namely: electron-electron scattering, electron-phonon coupling and fast trapping of electrons in defects on the nanocrystals interface. Low-temperature luminescence experiments were also performed to measure excitonic and trap states lifetimes. The persistent spectral holeburning technique was applied to measure localized surface plasmons dephasing times in colloidal silver nanoparticles capped with different stabilizing molecules. The dependence of T2 with three different stabilizers was demonstrated and theoretically analyzed. The results show that the dephasing times are shorter than the theoretically calculated T2 using the bulk dielectric functions of the metal. This discrepancy is attributed to changes in the electronic density of states at the nanoparticles interface caused by the presence of the stabilizers. Ab-initio calculations based on the Density Functional Theory were performed to further understand the interaction between the nanoparticles and stabilizing agents. The femtosecond transient absorption technique was employed to study the ultrafast dynamics of in-gap states in a glassceramics containing sodium niobate nanocrystals. Two main temporal components were found for the excited state absorption signal: a fast component, with decay time of ≈ 1 ps, and a slower component which is attributed to deep trap states. This slower component is responsible for the excited state absorption contribution in optical limiting experiments previously reported in the literature. The dynamics of the optical limiting in this sample was also studied, in the millisecond range, exciting the sample with a train of femtosecond pulses. The optical limiting behavior reflects the dynamics of population in the excited and trap states and this dynamics was modeled using rate equations for the electronic states’ populations. Finally, the pump-andprobe transient absorption technique was employed to investigate charge-transfer processes in colloids with rhodamine 6G and TiO2 nanoparticles. The transient bleaching signal behavior is compared with the one observed for unlinked rhodamine 6G dissolved in ethanol. The analysis of the results allowed the attribution of the bleaching behavior to charge-transfer from thermalized excited states of the dye molecules to the semiconductor conduction band and to the back charge-transfer from the semiconductor to the molecules.

Les espèces réactives de l'oxygène sont générées dans l'environnement biologique dans le cadre du métabolisme, mais elles peuvent aussi être produites en excès dans le cas de stress oxydatif provoqué par exemple par une exposition aux rayons UV. Dans le travail présenté ici, nous sommes intéressés par l'oxydation des protéines par deux de ces espèces réactives de l'oxygène : le peroxyde d'hydrogène, oxydant plutôt faible avec un temps de vie long, et l'oxygène singulet, oxydant fort avec un temps de vie court. L'action de ce dernier sur les protéines est étudiée en utilisant la spectroscopie de phosphorescence résolue en temps et l'oxydation des protéines par le peroxyde d'hydrogène est suivie par spectroscopie Raman. Dans ce cas, un travail préliminaire a été nécessaire afin d'attribuer de manière précise les bandes Raman des chaînes latérales des résidus d'acides aminés. Pour les deux types d'oxydations, les constantes de vitesse des réactions ont été déterminées pour trois protéines modèles. La stratégie suivie est d'utiliser de petits fragments de protéines tels que des acides aminés libres et des tripeptides pour comprendre ce qui se passe à l'échelle de la protéine. Cela nous aide à souligner l'importance de l'environnement protéique. Dans le cas de l'étude par spectroscopie Raman, l'influence du nombre de liaisons peptidiques sur les spectres obtenus depuis l'acide aminé libre, au tripeptide, jusqu'à la protéine est aussi mis en évidence. / Reactive species of oxygen are generated in biological environment as part of metabolism but they can also be produced in excess in case of oxidative stress provoked by UV exposure for example. In the present work we are interested in the oxidation of proteins by two of those reactive species of oxygen : hydrogen peroxide, rather weak oxidant with a long life time, and singlet oxygen, a strong oxidant with a short life time. The action of the latter one on the proteins is studied by using time-resolved phosphorescence spectroscopy and oxidation of the proteins by hydrogen peroxide is monitored by using Raman spectroscopy. In this case a preliminary work was necessary to attribute accurately the Raman bands of amino-acid residues side chains. For both oxidations, reaction rate constants of the reactions were determined for three model proteins. The strategy followed is to use small fragments of proteins such as free amino-acids and tripeptides to understand what is happening at the protein scale. This helps us underlining the importance of the proteic environment. In the case of Raman spectroscopy study, it also shows the influence of the number of peptidic bonds on the spectra obtained from free amino-acid to tripeptide and then to protein.Keywords : Raman Spectroscopy, protein, oxidation, hydrogen peroxide, singlet oxygen, time-resolved phosphorescence spectroscopy, reaction rate constant.

In this work the transient non-instantaneous polarization, i.e., laser-pulse injected small polarons and self-trapped excitons, is studied in the perovskite-like ferroelectric lithium niobate. The investigations span a time scale from femtoseconds to several hours. It is shown that the established small polaron picture is not able to describe transient absorption and photoluminescence of lithium niobate consistently. Several strong indications are presented demonstrating that the photoluminescence cannot be caused by geminate small polaron annihilation. Instead, the idea of radiatively decaying self-trapped excitons at the origin of the blue-green photoluminescence is revived. Excitons pinned on defect sites are proposed to lead to the already observed long-lived transient absorption in the blue spectral range in Mg- and Fe-doped crystals. Excitons pinned on iron-defects are studied in more detail. Their spectral fingerprint and absorption cross section is determined. Furthermore, it is shown that the occurrence of these pinned STEs can be tailored by chemical treatment of the samples and the experimental parameters such as the pump pulse intensity and photon energy. Based on the new experimental results and reviewing data published in literature, an atomistic picture of hopping and pinning of self-trapped excitons in lithium niobate is proposed. The question is addressed whether small polarons and self-trapped excitons in lithium niobate are coupled species in the sense that oppositely-charged polarons may merge into self-trapped excitons or STEs break into small polaron pairs. Decay kinetics of transient absorption and luminescence assigned to free small polarons and STEs indicate that this is not the case. For a more complete picture the ultrafast time scale is investigated as well. The formation times of small polarons and STEs are determined, which both lie in the range of 200 fs. No indications are found on the (sub)picosecond time scale indicating a coupling of both quasi-particle species either. In order to gain access to the formation of self-trapped excitons a custom-built femtosecond broadband fluorescence upconversion spectrometer is installed. Based on an already existing scheme, it is adapted to the inspection of weakly luminescent solid samples by changing to an all reflective geometry for luminescence collection. To avoid the necessity for an experimentally determined photometric correction of the used setup, an already established calculation method is extended considering the finite spectral bandwidth of the gate pulses. The findings presented here are important not only as fundamental research, but also regarding the technical application of lithium niobate and other similar nonlinear optical crystals. The simultaneous occurrence of both small polarons and self-trapped excitons is a rather rarely described phenomenon. Usually, the optical response of wide band gap oxide dielectrics is associated with only one of these quasi-particle species. This work may therefore be a stimulus to review the existing microscopic models for transient phenomena in other oxide dielectrics, which may help to improve their application in nonlinear optical and electro-optical devices. In this context the ultrafast transient photoluminescence spectroscopy established here for weakly luminescing solid samples may again provide valuable insight. With respect to lithium niobate, the results do not only resolve inconsistencies between the microscopic pictures described in literature, but also provide information regarding the extends to which the propagation of ultrashort laser pulses may be affected by (pinned-)STE absorption. It is shown that tailoring of the long-lived absorption center in the blue spectral range is possible, which may be used to avoid optical damage when high repetition rates are applied. It is important to emphasize that the microscopic model proposed in this work is mainly based on experimental indications. It is the task of further detailed theoretical investigations, e.g., via time-dependent density functional theory, to test whether the proposed model is justified. From an experimental perspective the important question remains whether (pinned-)STEs contribute to a photorefractive effect. In the experimentally easily accessible spectral range no absorption feature of mobile STEs is observed. As a complementary experimental technique, ultrafast holographic spectroscopy may reveal an excitonic contribution to photorefraction and provide further insight to STE transport and pinning phenomena.

Ever since the discovery of exotic phenomena like high temperature (Tc) superconductivity in the cuprates and colossal magnetoresistance in the manganites, strongly correlated electron systems have become the center of attention in the field of condensed matter physics research. This renewed interest has been further kindled by the rapid development of sophisticated experimental techniques and tremendous computational power. Computation plays a pivotal role in the theoretical investigation of these systems, because one cannot explain their complicated phase diagrams by simple, exactly solvable models. Among the plethora of experimental techniques, various kinds of high energy electron spectroscopies are fast gaining importance due to the multitude of physical properties and phenomena which they can access. However the physical processes involved and the interpretation of the spectra obtained from these spectroscopies are extremely complex and require extensive theoretical modelling. This thesis is concerned with the theoretical modelling of a certain class of high energy electron spectroscopies, viz. the core-level electron spectroscopies, for strongly correlated systems of various kinds. The spectroscopies covered are Auger electron spectroscopy (AES), core-level photoemission spectroscopy (core-level PES) and X-ray absorption spec- troscopy (XAS), which provide non-magnetic information, and also X-ray magnetic circular and linear dichroism (XMCD and XMLD), which provide magnetic information. .

Το ερευνητικό ενδιαφέρον για τους οργανικούς ημιαγωγούς είναι συνεχώς αυξανόμενο τα τελευταία χρόνια, καθώς η αγορά των οργανικών ηλεκτρονικών είναι από τις πιο αναπτυσσόμενες. Για την καλή απόδοση των διατάξεων αυτών σημαντικός είναι ο ρόλος των διεπιφανειών. Οι οικογένειες των n-type οργανικών ημιαγωγών naphthalene bisimides και perylene bisimides έχουν δείξει καλές αποδόσεις σε οργανικά τρανζίστορ. Στην παρούσα εργασία μελετήθηκαν οι διεπιφάνειες νέων οργανικών ημιαγωγών από τις παραπάνω οι οικογένειες οργανικών πάνω σε ανόργανα υποστρώματα με φασματοσκοπίες φωτοηλεκτρονίων. Μελετήθηκε ο σχηματισμός λεπτών υμενίων, πάχους έως τα 10 nm, τριών naphthalene οργανικών ημιαγωγών με διαφορετικό ενεργειακό χάσμα πάνω στον χρυσό και ενός perylene πάνω σε χρυσό και SiO2. Σκοπός ήταν να προσδιοριστεί η επίδραση των διαφορετικών υποκαταστατών του κεντρικού πυρήνα των naphthalene bisimides, στα ενεργειακά χαρακτηριστικά του ημιαγωγού και τα φράγματα έγχυσης των φορέων στην διεπιφάνεια με τον χρυσό. Ο τρόπος ανάπτυξης των όλων των οργανικών ημιαγωγών προσδιορίστηκε ως πολλαπλά στρώματα. Σε μια περίπτωση εντοπίστηκε ότι αλλάζει από οριζόντιο σε κάθετο ο προσανατολισμός των μορίων. Προσδιορίστηκαν όλα τα μεγέθη που χαρακτηρίσουν ενεργειακά την διεπιφάνεια. Συγκεκριμένα, σε όλες τις διεπιφάνειες εμφανίζεται ένα διεπιφανειακό δίπολο λόγω της αναδιάταξης του ηλεκτρονιακού νέφους της επιφάνειας του χρυσού από τα μόρια του οργανικού. Επίσης, οι τιμές των φραγμάτων έγχυσης των ηλεκτρονίων που υπολογίστηκαν είναι αρκετά μικρές που δείχνουν το n-type χαρακτήρα των οργανικών. Οι τιμές του δυναμικού ιονισμού που υπολογίστηκαν ήταν όλες μεγαλύτερες του 5, που είναι προϋπόθεση για τα τρανζίστορ να είναι σταθερά στον αέρα, ενώ σε μια περίπτωση η τιμή ήταν αρκετά μικρή, που δείχνει ότι ο συγκεκριμένος οργανικός ημιαγωγός μπορεί να έχει ambipolar χαρακτηριστικά. Τα αποτελέσματα έδειξαν ότι ο χρυσός μπορεί να χρησιμοποιηθεί αποτελεσματικά ως ηλεκτρόδιο σε τρανζίστορ με n-type οργανικούς ημιαγωγούς. Τέλος, από τα αποτελέσματα τονίστηκε ότι με την υποκατάσταση χημικών ομάδων στον κεντρικό πυρήνα του naphthalene, μια εύκολη διαδικασία, είναι δυνατόν να οδηγηθεί ενεργειακά η διεπιφάνεια προς την επιθυμητή κατεύθυνση. / In the recent years the interest on organic semiconductors is increased as the market of organic electronics is one of most promising. The interfaces between the organic semiconductors with metals or other materials are crucial for the performance of the devices. The study of interfaces by surface sensitive techniques could give useful information for the physics of metal-organic contacts and therefore it is possible the tuning and the improvement of the device performance. The n-type organic semiconductors derivatives of naphthalene bisimides and perylene bisimides, have shown good performance in OFETs. In this work, the interfaces of new synthesized naphthalene bisimides and perylene bisimides molecules with inorganic substrates have been studied by photoelectron spectroscopies. Thin films up to 10 nm thickness of three naphthalene organic semiconductors of different energy gap on Au substrates have been studied. The aim was to investigate the effect of the different substituents of the naphthalene core on the energy characteristics of the organic semiconductors and on the charge injection barriers at the interface. Moreover, the interface of one perylene n-type semiconductor deposited on Au and SiO2 was studied in order to examine the influence of the substrate on the growth mode and the electronic properties. The growth mode of all the organic semiconductors was characterized as simultaneous multilayers. In one case, the orientation of the organic molecules was changed from horizontal to vertical to the surface. In all the interfaces an interface dipole is formed during the early stage of deposition which is attributed to the reorganization of the electron cloud of the Au surface by the organic molecules when they are deposited on Au. The hole and electron injection barriers were also determined. The electron injection barriers were found to be small which indicates the n-type character of these organic molecules. In addition, the results displayed that the Au can be used efficiently as electrode in devices with these organic semiconductors. The ionization potentials of the organic semiconductors were measured and found to be above 5 eV for all and therefore, they are suitable for air-stable transistors. In the case of one organic semiconductor the ionization potential was measured close to the value of five. Thus, this organic semiconductor is suitable for ambipolar transistors. The valance band characteristics near the HOMO, as detected by the UPS spectra, showed that they are affected by the different substituents on the side groups of the imide. These results have shown that changing the substituents of the organic core, which is an easy process; it is possible to tune the energy levels and the electronic characteristics of the interface.

Μελετήθηκαν με μία σειρά από επιφανειακά ευαίσθητες τεχνικές δύο πρότυπα συστήματα με ενδιαφέρον για την ετερογενή κατάλυση. (Α) Στο διμεταλλικό σύστημα Sn/Ni διερευνήθηκαν οι συνθήκες και ο μηχανισμός κραματοποίησης του Sn στην επιφάνεια Ni(111). Το πλήρες επιφανειακό κράμα με δομή (√3×√3)R30°(από περίθλαση ηλεκτρονίων) σχηματίζεται θερμαίνοντας στους 7000C πάνω από 1,2 μονοστρώματα Sn. Οι διατεταγμένες δομές c(4x2) και c(2x2) αποτελούν ένα ενδιάμεσο στάδιο της κραματοποίησης σε χαμηλότερες θερμοκρασίες. Με θερμοπρογραμματισμένη εκρόφηση CO διαπιστώθηκε η βαθμιαία παρεμπόδιση της ρόφησης κατά το σχηματισμό του κράματος. Η διεπιφανειακή αλληλεπίδραση Sn/Ni(111) διερευνήθηκε τόσο με φασματοσκοπίες φωτοηλεκτρονίων, όσο και με θεωρητικούς υπολογισμούς από πρώτες αρχές. (Β) Μελετήθηκαν με φασματοσκοπίες ηλεκτρονίων και σκέδαση ιόντων He ρεαλιστικά πρόδρομα καταλυτικά συστήματα Ziegler – Natta (ZN), παρασκευάζοντας διάφορες σχετικές διεπιφάνειες με εξάχνωση MgCl2 σε υποστρώματα Si(111)7×7, Ti(0001) και SiO2. Η ασθενής αλληλεπίδραση μεταξύ MgCl2 και Si(111)7×7 γίνεται κυρίως μέσω των ατόμων Mg, τα οποία σε χαμηλές καλύψεις συμμετέχουν στη δημιουργία της υπερδομής (√3×√3)R30°. Η αλληλεπίδραση ενισχύεται μετά από θέρμανση, οπότε παραμένει στην επιφάνεια υπομονοστρωματική ποσότητα Mg. Από την άλλη πλευρά, το MgCl2, ακόμα και σε θερμοκρασία δωματίου αλληλεπιδρά ισχυρά με το Ti(0001), κυρίως μέσω των ατόμων Cl. Μετά από θέρμανση, ποσότητα Cl παραμένει συνδεδεμένη με το Ti ενώ απομακρύνεται από την επιφάνεια το Mg. Ασθενής αλληλεπίδραση παρατηρήθηκε μεταξύ MgCl2 και SiO2, ενώ η θέρμανση άφησε στην επιφάνεια υπομονοστρωματική ποσότητα οξειδωμένου Mg. Τέλος, μεταλλικό Ti που αποτέθηκε σε μικτό υπόστρωμα MgCl2 /SiO2 παρουσιάζει οξειδωτικές καταστάσεις οφειλόμενες στην ύπαρξη ατόμων Cl και O στην επιφάνεια, ενώ η θέρμανση οδηγεί στη δημιουργία επιφανειακών συμπλόκων, τα οποία είναι πιθανόν να προσομοιάζουν αντίστοιχα είδη στους πρακτικούς καταλύτες. / Two model systems, important in heterogeneous catalysis, where investigated using surface sensitive spectroscopies. (A) In the bi-metallic system Sn/Ni, the formation conditions and the mechanism of Sn surface alloying on Ni(111) were initially studied. The epitaxial surface alloy formation with LEED structure(√3×√3)R30°, requires annealing at 7000C of more than 1.2 monolayers Sn. The c(4x2) and c(2x2) structures were found to be an intermediate step of surface alloying. Temperature-programmed desorption showed a gradual blocking of CO adsorption with progressing alloying. The interfacial interactions in Sn /Ni(111) were demonstrated both by electron spectrosopies and via first principle calculations. (B) Surface science compatible model catalysts of the Ziegler-Natta (ZN) system were investigated by electron spectroscopies and He ion scattering on relevant interfaces formed via evaporation of MgCl2 on Si(111)7×7, Ti(0001) and SiO2 and upon evaporation of Ti on a MgCl2 /SiO2 mixed substrate.. The weak interaction between MgCl2 and Si(111)7×7 takes place through the Mg atoms, which at low coverage form a new surface structure, namely (√3×√3)R30°. The interaction was stronger after annealing, whereby a submonolayer coverage of Mg atoms remain on the surface. On the other hand, MgCl2 interacts strongly with the Ti substrate even at room temperature via the Cl atoms. Annealing causes the desorption of MgCl2 followed by decomposition, that leaves on the surface only Cl atoms attached to Ti, while no Mg atoms remain on the surface. Only a weak interaction was observed between MgCl2 and SiO2, while annealing resulted in the desorption and decomposition of MgCl2 leaving on the surface a sub-monolayer coverage of oxidized Mg. Upon Ti metal evaporation on the mixed MgCl2 / SiO2 support at room temperature, Ti appears at higher oxidation states, due to reaction with Cl and O atoms at the surface. Annealing causes the formation of surface complexes, which are very likely similar to species formed on practical ZN catalysts.

Ce travail porte sur le développement de nouvelles méthodes de caractérisation in-situ basées sur les spectroscopies électroniques XPS et MM-EPES associées à des calculs théoriques obtenus grâce à des simulations Monte-Carlo afin de réaliser des études quantitatives fines et précises. La première partie de ce travail, a été consacrée à l’analyse quantitative de signaux XPS et MM-EPES. Pour cela, dans un premier temps, la fonction de correction de l’analyseur hémisphérique (HSA) qui est une combinaison de l’aire d’analyse (A) et de la transmission (T) a été déterminée en utilisant une nouvelle méthode basée sur des images élastiques. Pour la première fois, la dépendance de A en énergie cinétique des électrons a été mise en évidence. Avec l’utilisation de cette nouvelle fonction, une méthode de caractérisation in situ basée sur la modélisation théorique des signaux XPS et MM-EPES a été développée. Cette méthode a permis d’étudier le dépôt d’un film d’or sur un substrat de silicium oxydé et a montré une grande précision dans le cas de très faibles quantités de matière déposée (< 2 nm) alors que les techniques microscopiques classiques se sont révélées inefficaces. La deuxième partie a porté sur le développement d’une nouvelle technique d’imagerie in-situ appelé MM-EPEM qui consiste à scanner la surface par un faisceau d’électrons et de collecter les électrons rétrodiffusés élastiquement afin de construire une image en intensité de la surface. Les étapes d’obtention des images MM-EPEM et les procédures d’exploitation de ces dernières ont été décrites et optimisées. Ensuite, cette technique a été utilisée pour l’étude de l’état de surface de dépôts d’or sur différents substrats. Cette technique s’avère être non destructive et très sensible aux éléments présents à la surface. Et elle permet de déterminer la cartographie chimique et la nano-organisation de la surface. / This thesis focuses on the development of new in-situ methods of characterization based on the electron spectroscopies (XPS and EPES) coupled with theoretical calculations obtained through Monte-Carlo simulations in order to perform very precise quantitative studies. The first part of this thesis was devoted to quantitative studies of XPS and MM-EPES measurements. Firstly, the correction function of a hemispherical analyzer (HSA) which is a combination of the analysis area (A) and the transmission (T) was determined using a new method based on the elastic images. For the first time, the dependence of A on the kinetic energy of electrons was highlighted. Using this function, an in-situ method based on the combination of XPS and MM-EPES modeling was setting up. This method was used to determine the organization of gold film deposed on oxidized silicon substrate. Measurements show that this method is able to determine surface parameters when the microscopy techniques do not give any information in the case of a small quantity of gold deposit (less than 2 nm). The second part of this work was directed towards developing a new generation of microscopy called MM-EPEM which is based on the detection of elastic electrons. The stages required to obtain these images are well described and optimized here. The MM-EPEM images processing was used to study gold growth on different substrates. This technique is a non-destructive method and allows the operator to construct chemical tomography and to determine the nano-organization of the surface.

Raman spectroscopy involves change in the polarizability of the molecular system on excitation and is based on scattering process. Spontaneous Raman scattering is a two photon process, in which the input light initiates the excitation, which then leads to an emission of another photon due to scattering. It is extensively used to understand molecular properties. As spontaneous Raman scattering is a weak process, the detection of these weak Raman photons are rather difficult. Alternatively, resonance Raman (RR) scattering is another technique where the excitation wavelength is chosen according to the material under study. The excitation wavelength is chosen to be within the absorption spectrum of the material under study. RR spectroscopy not only provides considerable improvement in the intensity of the Raman signal, but also provides mode specific information i.e. the modes which are Franck-Condon active in that transition can be observed. There are reports on RR studies of many systems using pulsed light as an excitation source. It is necessary to use at least two pulsed laser sources for carrying out the time resolved RR spectroscopy. A single pulse source for excitation would lead to compromise either with temporal or spectral resolution which is due to the uncertainty principle. If an excitation pulse has pulse width of ~100 femtoseconds then the spectral resolution will be ~ 150 cm-1. It is clear now that for improving the temporal and spectral resolution simultaneously, usage of single pulse for Raman experiments (spontaneous scattering) is not adequate. The usage of multiple laser pulses may provide the way out to improve the resolutions. Nonlinear spectroscopy in a broad view helps in understanding the structural and dynamical properties of the molecular systems in a deeper manner. There are a number of techniques as a part of nonlinear spectroscopy that have emerged in due course to meet different requirements and to overcome some difficulties while understanding the molecular properties. Stimulated Raman (SRS) gain, coherent anti-Stokes Raman scattering (CARS) and the inverse Raman spectroscopy are a few to mention as third order nonlinear spectroscopic techniques which give the similar kind of information about the molecular systems. Stimulated Raman scattering is a more general process involved in nonlinear Raman processes. SRS involves at least two laser pulses and the difference in their frequencies should match with the vibrational frequency of the molecule. The polarization has to be matched between the Raman pump and the Raman probe pulses. We have developed a new nonlinear Raman technique in our laboratory named as ultrafast Raman loss spectroscopy (URLS) using the principles of nonlinear Raman scattering. It involves the Raman pump (~ 1 picosecond (ps) or ~ 15 cm-1spectral resolution) and Raman probe as a white light continuum (100 fs) whose frequency components ranges from 400-900 nm. The laser system consists of Tsunami which is pumped by a Millennia laser and Spitfire-Pro, a regenerative amplifier which is pumped by an Empower laser. Tsunami provides a 100 fs, 780 nm centered, 80 MHz and ~6 nJ energy laser pulses. The Tsunami output is fed into Spitfire to amplify its energy and change the repetition rate to 1 KHz. The pulse length of the input pulse is preserved in amplification. The output of amplifier is split into two equal parts; one part is used to pump the Optical Parametric Amplifier (OPA) in order to generate wavelengths in the range 480-800 nm. The output of the OPA is utilized to generate Raman pump which has to be in ps in order to get the best spectral resolution. A small portion of the other part of amplifier output is utilized to generate white light source for the Raman probe. The remaining part of the amplifier output is used to pump TOPAS to generate wavelengths in the ultraviolet region. URLS has been applied to many molecular systems which range from non-fluorescent to highly fluorescent. URLS has been demonstrated to be very sensitive and useful while dealing with highly fluorescent systems. URLS is a unique technique due to its high sensitivity and the Raman loss signal intensity is at least 1.5-2 times higher as compared to the Raman gain signal intensities. Cresyl violet perchlorate (CVP) is a highly fluorescent system. URLS has been applied to study CVP even at resonance excitation. Rhodamine B has also been studied using URLS. Spontaneous Raman scattering is very difficult to observe experimentally in such high quantum yield fluorescent systems. The variation in the lineshapes of the Raman bands for different RP excitation wavelengths in URLS spectra shows the mode dependent behavior of the absorption spectrum. The experimental observation of variation in the lineshape has been accounted using theoretical formalism. The thesis is focused on discussing the development of the new nonlinear Raman spectroscopic technique URLS in detail and its applicability to molecular systems for better understanding. A theoretical formalism for accounting the uniqueness of URLS among the other nonlinear Raman techniques is developed and discussed in various pictorial representations i.e. ladder, Feynman and closed loop diagrams. A brief overview of nonlinear spectroscopy and nonlinear Raman spectroscopy is presented for demonstrating the difference between the URLS and the other nonlinear Raman techniques.

Optics are a powerful probe of chemical structure that can often be linked to theoretical predictions, providing robustness as a measurement tool. Not only do optical interactions like second harmonic generation (SHG), single and two-photon excited fluorescence (TPEF), and infrared absorption provide chemical specificity at the molecular and macromolecular scale, but the ability to image enables mapping heterogeneous behavior across complex systems such as biological tissue. This thesis will discuss nonlinear and linear optics, leveraging theoretical predictions to provide frameworks for interpreting analytical measurement. In turn, the causal mechanistic understanding provided by these frameworks will enable structurally specific quantitative tools with a special emphasis on application in biological imaging. The thesis will begin with an introduction to 2nd order nonlinear optics and the polarization analysis thereof, covering both the Jones framework for polarization analysis and the design of experiment. Novel experimental architectures aimed at reducing 1/f noise in polarization analysis will be discussed, leveraging both rapid modulation in time through electro-optic modulators (Chapter 2), as well as fixed-optic spatial modulation approaches (Chapter 3). In addition, challenges in polarization-dependent imaging within turbid systems will be addressed with the discussion of a theoretical framework to model SHG occurring from unpolarized light (Chapter 4). The application of this framework to thick tissue imaging for analysis of collagen local structure can provide a method for characterizing changes in tissue morphology associated with some common cancers (Chapter 5). In addition to discussion of nonlinear optical phenomena, a novel mechanism for electric dipole allowed fluorescence-detected circular dichroism will be introduced (Chapter 6). Tackling challenges associated with label-free chemically specific imaging, the construction of a novel infrared hyperspectral microscope for chemical classification in complex mixtures will be presented (Chapter 7). The thesis will conclude with a discussion of the inherent disadvantages in taking the traditional paradigm of modeling and measuring chemistry separately and provide the multi-agent consensus equilibrium (MACE) framework as an alternative to the classic meet-in-the-middle approach (Chapter 8). Spanning topics from pure theoretical descriptions of light-matter interaction to full experimental work, this thesis aims to unify these two fronts. <br>