In der vorliegenden Arbeit wird ein neuer Ansatz vorgestellt, um Lipiddomänen, die Bindungsorte peripherer und integraler Membranproteine darstellen können, zu charakterisieren. Insbesondere wurde die Analyse der Fluoreszenzlebenszeiten von NBD-markierten Lipidanaloga benutzt, um Lipiddomänen in Giant unilamellar vesicles (GUV) und darauf aufbauend, in der Plasmamembran von Säugerzellen zu untersuchen. Das typische Zeitfenster von Fluoreszenzlebenszeiten im Bereich von Nanosekunden ermöglicht es, auch sehr kurzlebige Lipiddomänen nachzuweisen. Mit Hilfe des Fluorescence lifetime imaging (FLIM) wurden für die liquid disordered (ld) und liquid ordered (lo) Domänen in GUV jeweils spezifische Werte für das Abklingen der Fluoreszenz gemessen. Sogar die Existenz von submikroskopischen Domänen in GUV konnte nachgewiesen werden. Die Fluoreszenzlebenszeit des Lipidanalogs C6-NBD-PC zeigte in der Plasmamembran von Säugerzellen eine breite Verteilung. Dies legt in Übereinstimmung mit FLIM-Experimenten an aus der Plasmamembran von HeLa-Zellen gewonnenen Giant vesicles nahe, dass in der Plasmamembran von Zellen eine Vielzahl verschiedener submikroskopischer Lipiddomänen existiert. Darauf aufbauend wurde die Fluoreszenzmikroskopie an GUV angewendet, um die Bindung von fluoreszenzmarkiertem alpha-Synuclein an mittels FLIM charakterisierte Lipiddomänen zu untersuchen. Die Experimente zeigten, dass das Protein mit hoher Affinität an negativ geladene Phospholipide unter der Vorraussetzung bindet, dass diese sich in ld Domänen befinden. Im Gegensatz dazu erfolgt keine Bindung wenn diese Lipide in lo Domänen lokalisiert sind. Im Vergleich zum wildtypischen alpha-Synuclein zeigte die Variante A30P eine geringere Affinität zur Membran, während die E46K-Variante eine stärkere Bindung zeigte. Dies deutet darauf hin, dass bei den erblichen Formen des Morbus Parkinson eine veränderte Assoziation des alpha-Synucleins mit der Membran eine Rolle spielen kann. / In the present study a novel approach to characterize lipid domains, which may provide binding sites for peripheral or integral membrane proteins, is demonstrated. In particular, analysis of fluorescence lifetimes of NBD-labeled lipid analogues was used to study lipid domains in Giant unilamellar vesicles (GUV) and – based on the GUV results – in the plasma membrane of mammalian cells. As fluorescence decays in a few nanoseconds it is possible to to detect also very short-lived lipid domains. Fluorescence Lifetime Imaging (FLIM) revealed that the fluorescence decay of NBD-lipid analogues showed domain dependent decay times in the liquid disordered (ld) and the liquid ordered (lo) phase of GUV. Even the existence of submicroscopic domains in lipid membranes could be detected by FLIM. A broad distribution of the fluorescence lifetime was found for C6-NBD-PC inserted in the plasma membrane of mammalian cells. In agreement with FLIM studies on lipid domain forming Giant vesicles derived from the plasma membrane of HeLa-cells this may suggest that a variety of submicroscopic lipid domains exists in the plasma membrane of intact mammalian cells. Based on that, fluorescence microscopy was used on GUV to study the binding of fluorescently labeled alpha-synuclein at lipid domains previously characterized by FLIM. The experiments suggested that alpha-synuclein binds with high affinity to negatively charged phospholipids, when they are embedded in a ld as opposed to a lo environment. When compared with wildtype alpha-synuclein, the disease-causing alpha-synuclein variant A30P bound less efficiently to anionic phospholipids, while the variant E46K showed enhanced binding. This suggests that an altered association of alpha-synuclein with membranes may play a role in the inherited forms of Parkinson’s disease.

Neste trabalho investigamos efeitos de fotoirradiação e toxinas sob membranas celulares miméticas. Foram utilizadas, como modelo de membranas lipídicas, vesiculas unilamelares gigantes (GUVs) compostas pro lipídeos oxidados e não oxidados observadas por microscopia ótica de contraste de fase. Inicialmente estudamos a foto-resposta de membranas compostas por POPC e POPG dispersas em solução contendo azul de metileno (MB). Na sequência, estudamos o efeito de toxinas formadoras de poros, Esticolisina I (ST I) e Esticolisina II (ST II), em membranas contendo lipídeos oxidados e não oxidados. Os resultados de MB (10 µM) disperso em solução de membranas compostas por POPC e o lipídeo aniônico POPG indicaram que o aumento da densidade de carga negativa nas membranas das GUVs, que favorece a ligação da moléculas positivamente carregadas como MB nas membranas, tem como consequência um aumento de permeabilidade da membrana muito mais rápído em relação a membranas compostas apenas por POPC. Isto se deve ao fato que a localização preferencial do MB na membrana de POPC:POPG favorece a formação de oxigênio singlete próximo a dupla ligação da cadeia alquílica, dando início a reação de peroxidação lipídica de maneira mais efetiva que em membrana de POPC. Os resultados da ação das toxinas STI e STII (21 nM) em GUVs contendo lipídeos não oxidados PC e esfingomielina evidenciam que apenas STII é capaz de permear estas membranas a esta concentração. Mais ainda, nossos resultados sugerem que a existência de separação de fases fluida-gel na bicamada lipidica composta por PC:SM (razão molar 1:1) favorece a ação da toxina StII. Ao analisarmos membranas contendo lipídeos hidroperoxidados (POPC-OOH) dispersas em solução contendo STII (21 nM) observamos um aumento de permeabilidade na membrana num conjunto de GUVs, associado a formação de poros, apenas em bicamadas lipídicas formadas por misturas de lipídeos oxidados (POPC) e não oxidados (POPC-OOH). Quanto maior a concentração de lipídeos oxidados na membrana mais rapidamente ocorre o aumento de permeabilidade. / In this work we investigate the effects of photoirradiation and toxins on mimetic cell membranes. As a model of lipid membranes, giant unilamellar vesicles (GUVs) composed of oxidized and oxidized pro-lipids were observed by optical phase contrast microscopy. Initially we studied the photo-response of membranes composed of POPC and POPG dispersed in solution containing methylene blue (MB). Following, we studied the effect of pore-forming toxins, Sticolysin I (ST I) and Sticolysin II (ST II), on membranes containing oxidized and non-oxidized lipids. The results of MB (10 M) dispersed in solution of membranes composed of POPC and the anionic lipid POPG indicated that the increase in the negative charge density in the membranes of GUVs, which favors the binding of positively charged molecules as MB in the membranes, consequently increases membrane permeability in regard to membranes composed only of POPC. This is due to the fact that the preferred location of the MB in the POPC: POPG membrane favors the formation of singlet oxygen near the double bond of the alkyl chain, initiating the lipid peroxidation reaction more effectively than in the POPC membrane. The results of the action of the STI and STII toxins (21 nM) on GUVs containing non oxidised lipids PC and sphingomyelin show that only STII is able to permeate these membranes at this concentration. Moreover, our results suggest that the existence of fluid-gel phase separation in the lipid bilayer composed of PC:SM (molar ratio 1:1) favors the action of the StII toxin. When analyzing membranes containing hydroperoxidized lipids (POPC-OOH) dispersed in solution containing STII (21 nM) we observed an increase in membrane permeability in a set of GUVs, associated with pore formation, only in lipid bilayers formed by mixtures of oxidized lipids (POPC-OOH) and non-oxidized ones. The higher the concentration of oxidized lipids in the membrane, the faster the permeability increases.

No description available.

In mammalian cells, homeostasis and fate during development relies on the proper transport of membrane-bound cargoes to their designated cellular locations. The hetero-tetrameric adaptor protein complexes (APs) are required for sorting and concentration of cargo at donor membranes, a crucial step during targeted transport. AP2, which functions at the plasma membrane during clathrin-mediated endocytosis, is well characterized. In contrast, AP1 a clathrin adaptor mediating the delivery of lysosomal hydrolases via mannose 6-phosphate receptors (MPRs) and AP3 an adaptor ensuring the proper targeting of lysosomal membrane protein are difficult to study by classic cell biology tools. To gain new insights on these APs, our lab has previously designed an in vitro system. Reconstituted liposomes were modified with small peptides mimicking the cytosolic domains of bona fide cargoes for AP1 and AP3 respectively and thereby enabling the selective recruitment of these APs and the identification of the interacting protein network. In the study at hand we utilize above-described liposomes to generate supported lipid bilayers and Giant Unilamellar Vesicles (GUVs), large-scale membrane systems suited for analysis by fluorescence microscopy. By using cytosol containing fluorescently-tagged subunits, we visualized clathrin coats on artificial membranes under near physiological conditions for the first time. Moreover, we demonstrated clathrin-independent recruitment of AP3 coats on respective GUVs. Presence of active ARF1 was sufficient for the selective assembly of AP1-dependent clathrin coats and AP3 coats on GUVs. By using dye-conjugated ARF1, we show that ARF1 colocalized with AP3 coats on GUVs and that increased association of ARF1 with GUVs coincided with AP1-dependent clathrin coats. Our previous study identified members of the septin family together with AP3 coats on liposomes. Here we show on GUVs, that active ARF1 stimulated the assembly of septin7 filaments, which may constrain the size and mobility of AP3 coats on the surface. Subsequent cell biology studies in HeLa cells linked septins to actin fibers on which they may control mobility of AP3-coated endosomes and thus their maturation. An actin nucleation complex, based on CYFIP1 was identified together with AP1 on liposomes before. Here we show on GUVs, that CYFIP1 is recruited on the surface surrounding clathrin coats. Upon supply of ATP, sustained actin polymerization generated a thick shell of actin on the GUV surface. The force generated by actin assembly lead to formation of long tubular protrusions, which projected from the GUV surface and were decorated with clathrin coats. Thereby the GUV model illustrated a possible mechanism for tubular carriers formation. The importance of CYFIP1-reliant actin polymerization for the generation of MPR-positive tubules at the trans-Golgi network (TGN) of HeLa cells was subsequently demonstrated in our lab. The notion that tubulation of artificial membranes could be triggered by actin polymerization allowed us to perform a comparative mass spectrometry screen. By comparing the abundance of proteins on liposomes under conditions promoting or inhibiting actin polymerization, candidates possibly involved in stabilization, elongation or fission of membrane tubules could be identified. Among the proteins enriched under conditions promoting tubulation, we identified type I phosphatidylinositol-4-phosphate 5-kinases. Their presence suggested an involvement of phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) in tubule formation. By cell biology studies in HeLa we show, that down regulation of these enzymes altered the dynamics of fluorescently-tagged MPRs, illustrating the importance of locally confined PI(4,5)P2 synthesis during formation of coated carriers at the TGN. Bin–Amphiphysin–Rvs (BAR) domains are known to sense membrane curvature and induce membrane tubulation. Among various BAR domain proteins, Arfaptin2 was enriched under conditions allowing tubulation of liposomes. By microscopy studies on HeLa cells we show, that Arfaptin2 as well as its close paralog Arfaptin1 were present on AP1-coated MPR tubules emerging from the TGN. We further show, that tubule fission occurred at regions were Arfaptin1 is concentrated and that simultaneous down regulation of both Arfaptins lead to increased number and length of MPR tubules. Since fission of coated transport intermediates at the TGN is poorly understood, our findings contribute a valuable component towards a model describing the entire biogenesis of coated post-Golgi carriers. In conclusion, combining artificial membrane systems and cell biology studies allowed us to propose new models for formation as wall as for fission of AP1-coated transport intermediates at the TGN. Further we gained new insights on AP3 coats and the possible involvement of septin filaments in AP3-dependent endosomal maturation.

Η καλσείνη (calcein) γνωστή και με την αγγλική ορολογία Fluorexon/Fluorescein είναι μια μικρού μοριακού βάρους υδατοδιαλυτή ουσία και χρησιμοποιείται ως μόριο- πρότυπο μικρού υδατοδιαλυτού φαρμάκου, σε πλήθος εφαρμογών τόσο στο τομέα της φαρμακευτικής όσο και στο τομέα της χημείας. Η χρησιμότητα της έγκειται στο γεγονός ότι παρουσιάζει φθορισμό που αποσβένειται σε υψηλές συγκεντρώσεις(100mM) και της εύκολης παρακολούθησης της αποδέσμευσης της από σωματιδιακά συστήματα χορήγησης φαρμάκων. Τα λιποσώματα είναι καθορισμένα λιπιδικά κυστίδια με μέγεθος που κυμαίνεται μεταξύ 0,05-5μm και βρίσκονται εδώ και πολλά χρόνια στο επίκεντρο του ερευνητικού ενδιαφέροντος, ως φορείς φαρμάκων και βιοδραστικών ενώσεων καθώς και για την βελτίωση της απόδοσής τους στους οργανισμούς. Τα λιποσώματα μελετώνται για την απόδοση βιολογικά δραστικών ουσιών κυρίως για τους εξής λόγους: 1. την αδυναμία αυτών των ουσιών να επιτύχουν την επιθυμητή συγκέντρωση στην επιθυμητή περιοχή, 2. την κυτταροτοξικότητά τους και 3. προβλήματα που σχετίζονται με τη χορήγησή τους (για παράδειγμα χαμηλή διαλυτότητά τους σε κατάλληλο φορέα). Σκοπός της παρούσας εργασίας είναι, η μαθηματική μοντελοποίηση και η μελέτη της κινητικής αποδέσμευσης των μορίων της καλσείνης, που λειτουργούν ως μόρια- πρότυπου υδατοδιαλυτού φαρμάκου, σε συστήματα λιποσωμάτων τα οποία παρασκευάστηκαν σε διαφορετικές λιπιδικές συστάσεις με την επίδραση της χοληστερόλης και της πολυαιθυλενογλυκόλης να καθορίζουν τις φυσικοχημικές τους ιδιότητες και τις αλληλεπιδράσεις μεταξύ των μορίων της καλσείνης. Ειδικότερα, παρασκευάστηκαν λιποσώματα SUV με την μέθοδο του λεπτού υμενίου, στα οποία εγκλωβίστηκε καλσείνη σε υψηλή συγκέντρωση (100mM) με χρήση ακίδας υπερήχων για περίπου 15 λεπτά, σε συστάσεις (PC, PC/Chol 4:1, 2:1 και 1:1 mole/mole) καθώς και (PC/Chol/PEG 2:1:0.04, 2:1:0.08, 2:1:0.16 και 2:1:0.32 mole/mole/mole). Η μελέτη των φυσικοχημικών χαρακτηριστικών των συστημάτων αυτών όπως είναι η μέση υδροδυναμική διάμετρος, η πολυδιασπορά και το ζ-δυναμικό τους, πραγματοποιήθηκε με τη χρήση DLS (Dynamic Light Scattering Nano-ZS Malvern UK) στους 25°C. Ο προσδιορισμός της ποσοστιαίας απελευθέρωσης της καλσείνης (% Cumulative calcein release) έγινε μετά από επώαση των δειγμάτων στους 37°C μέσα σε διάστημα 32h, υπολογίζοντας το ποσοστό συγκράτησης της καλσείνης (Latency %) σε καθορισμένα χρονικά διαστήματα με μέτρηση του φθορισμού (FL) της ουσίας. Στη συνέχεια τα αποτελέσματα αποδόθηκαν αναλυτικά σε διαγράμματα LATENCY% και RETENTION% σε συνάρτηση με το χρόνο με σκοπό να δημιουργηθεί ένα ολοκληρωμένο προφίλ για κάθε λιποσωμική δομή. Τέλος κατασκευάστηκαν διαγράμματα RELEASE% σε συνάρτηση με το χρόνο. Όπως αναμενόταν η διπλοστοιβάδα των PEG-λιποσωμάτων είναι πιο σταθερή σε σχέση με την διπλοστοιβάδα των λιποσωμάτων χωρίς PEG με αποτέλεσμα την ελάττωση της διαπερατότητας της λιπιδικής μεμβράνης. Η ίδια υπόθεση έγινε και στην περίπτωση που στα λιποσώματα προστέθηκε χοληστερόλη, όπου η αύξηση της συγκέντρωσης της χοληστερόλης οδήγησε σε αύξηση της ακεραιότητας της διπλοστοιβάδας τους. Τέλος μια εξίσωση-πρότυπο τριών παραμέτρων κατασκευάστηκε και τροποποιήθηκε κατάλληλα έτσι ώστε να περιγράψει με ακρίβεια τα πειραματικά αποτελέσματα. Οι παράμετροι Kon, Koff περιγράφουν την σύνδεση και την αποσύνδεση των μορίων της καλσείνης από τη λιποσωμική δομή και σε συνδυασμό με την παράμετρο Ks καθορίζουν την απελευθέρωση των μορίων της. Στη συνέχεια χρησιμοποιήθηκε η συνάρτηση Weibull, μια σαφώς απλούστερη συνάρτηση σε σχέση με την συνάρτηση τριών παραμέτρων που χρησιμοποιήσαμε αρχικά, έτσι ώστε να καθοριστεί ενδελεχώς ο ρόλος της διάχυσης στα συστήματα λιποσωμάτων που παρασκευάσαμε. Επόμενο βήμα ήταν η επεξεργασία των δύο αυτών συναρτήσεων με την τεχνική Monte Carlo, ώστε να εξαχθεί μια εκτίμηση για την τυπική απόκλιση των παραμέτρων των συναρτήσεων. Τα αποτελέσματα υπέδειξαν την ιδανικότερη τεχνική/μέθοδο προσαρμογής που θα μπορούσε να χρησιμοποιηθεί για κάθε λιποσωμική δομή που παρασκευάσαμε. / Calcein also known as Fluorexon/Fluorescein is a water-soluble substance with low molecular weight. Calcein used as a model-molecule of highly water-soluble drugs in a wide range of applications in pharmaceutics and chemistry. It’s usefulness is due to the fact that fluorescence self-quenches in high concentrations and so it’s release from liposome systems could monitor with ease. Liposomes are vesicles with particle size from 0.05 to 5μm. Liposome structures are at the heart of scientific interest for many years, as they are used as widely in drug delivery systems and have enhanced their performance in biota. Studies in liposomes, focused on the performance of bio-active substances for the following reasons: 1. Weakness of them to achieve the appropriate concentration in the appropriate area. 2. High cytotoxicity and 3. Problems that appears during their administration (f.i. low solubility). The objective of the current study, is to mathematically model and study the release kinetics of calcein molecules (that work as a hydrophilic drug model) from liposome structures with different compositions when cholesterol and polyethylene-glycol determines physicochemical properties and retentions of calcein molecules. Specifically, SUV-liposomes prepared with the thin-film hydration method which encapsulate calcein molecules of high concentration (100mM), were used. Their size was decreased by applying probe sonication for 15min. Phosphatidylcholine (PC), Cholesterol (Chol) and polyethelene-glycol 2000 (PEG) were used in different concentrations (PC, PC/Chol 4:1, 2:1 and 1:1 mole/mole) and (PC/Chol/PEG 2:1:0.04, 2:1:0.08, 2:1:0.16 and 2:1:0.32 mole/mole/mole). Study of vesicle physicochemical characteristics such as z-size, pdi and z-potential, was carried out by DLS (Nano-ZS Malvern UK) at 25°C. Determination of the percentage of Cumulative calcein release taking place during incubation of vesicles at 37°C for up to 32h. Fluorescence Intensity (FL) measurements were performed to estimate the restraint percentage of calcein molecules. Subsequently, final results were attributed to analytical plots (LATENCY % AND RETENTION % with time), in order to create a completed profile for every liposome structure. Finally, results summarized into release curves dependent on time. As expected, the lipid bilayer of PEGylated liposomes was more stable than bilayer of liposomes without PEG coating and as a result the permeability of the later formulation decreased. This was also the case when Chol was included in the liposome membrane; vesicle integrity increased with increasing Chol concentration. A model three-parameter equation was used and modified in appropriately in order to describe the experimental results with accuracy. Parameters Kon, Koff (rate constants of association and disassociation, respectively) and Ks were used to describe the cumulative release of calcein over time, for each formulation study. Subsequently, we use Weibull function, clearly a simpler function in relation to the three-parameters function used initially, in order to determine thoroughly the role of diffusion systems liposome preparations. Next step was the processing of these two functions with Monte Carlo technique in order to extract an estimation of the Standard Deviation (SD) of the parameters of the functions. Results indicated the ideal technique/method of fitting, that could be used for each liposomal structure prepared.

In mammalian cells, homeostasis and fate during development relies on the proper transport of membrane-bound cargoes to their designated cellular locations. The hetero-tetrameric adaptor protein complexes (APs) are required for sorting and concentration of cargo at donor membranes, a crucial step during targeted transport. AP2, which functions at the plasma membrane during clathrin-mediated endocytosis, is well characterized. In contrast, AP1 a clathrin adaptor mediating the delivery of lysosomal hydrolases via mannose 6-phosphate receptors (MPRs) and AP3 an adaptor ensuring the proper targeting of lysosomal membrane protein are difficult to study by classic cell biology tools. To gain new insights on these APs, our lab has previously designed an in vitro system. Reconstituted liposomes were modified with small peptides mimicking the cytosolic domains of bona fide cargoes for AP1 and AP3 respectively and thereby enabling the selective recruitment of these APs and the identification of the interacting protein network. In the study at hand we utilize above-described liposomes to generate supported lipid bilayers and Giant Unilamellar Vesicles (GUVs), large-scale membrane systems suited for analysis by fluorescence microscopy. By using cytosol containing fluorescently-tagged subunits, we visualized clathrin coats on artificial membranes under near physiological conditions for the first time. Moreover, we demonstrated clathrin-independent recruitment of AP3 coats on respective GUVs. Presence of active ARF1 was sufficient for the selective assembly of AP1-dependent clathrin coats and AP3 coats on GUVs. By using dye-conjugated ARF1, we show that ARF1 colocalized with AP3 coats on GUVs and that increased association of ARF1 with GUVs coincided with AP1-dependent clathrin coats. Our previous study identified members of the septin family together with AP3 coats on liposomes. Here we show on GUVs, that active ARF1 stimulated the assembly of septin7 filaments, which may constrain the size and mobility of AP3 coats on the surface. Subsequent cell biology studies in HeLa cells linked septins to actin fibers on which they may control mobility of AP3-coated endosomes and thus their maturation. An actin nucleation complex, based on CYFIP1 was identified together with AP1 on liposomes before. Here we show on GUVs, that CYFIP1 is recruited on the surface surrounding clathrin coats. Upon supply of ATP, sustained actin polymerization generated a thick shell of actin on the GUV surface. The force generated by actin assembly lead to formation of long tubular protrusions, which projected from the GUV surface and were decorated with clathrin coats. Thereby the GUV model illustrated a possible mechanism for tubular carriers formation. The importance of CYFIP1-reliant actin polymerization for the generation of MPR-positive tubules at the trans-Golgi network (TGN) of HeLa cells was subsequently demonstrated in our lab. The notion that tubulation of artificial membranes could be triggered by actin polymerization allowed us to perform a comparative mass spectrometry screen. By comparing the abundance of proteins on liposomes under conditions promoting or inhibiting actin polymerization, candidates possibly involved in stabilization, elongation or fission of membrane tubules could be identified. Among the proteins enriched under conditions promoting tubulation, we identified type I phosphatidylinositol-4-phosphate 5-kinases. Their presence suggested an involvement of phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) in tubule formation. By cell biology studies in HeLa we show, that down regulation of these enzymes altered the dynamics of fluorescently-tagged MPRs, illustrating the importance of locally confined PI(4,5)P2 synthesis during formation of coated carriers at the TGN. Bin–Amphiphysin–Rvs (BAR) domains are known to sense membrane curvature and induce membrane tubulation. Among various BAR domain proteins, Arfaptin2 was enriched under conditions allowing tubulation of liposomes. By microscopy studies on HeLa cells we show, that Arfaptin2 as well as its close paralog Arfaptin1 were present on AP1-coated MPR tubules emerging from the TGN. We further show, that tubule fission occurred at regions were Arfaptin1 is concentrated and that simultaneous down regulation of both Arfaptins lead to increased number and length of MPR tubules. Since fission of coated transport intermediates at the TGN is poorly understood, our findings contribute a valuable component towards a model describing the entire biogenesis of coated post-Golgi carriers. In conclusion, combining artificial membrane systems and cell biology studies allowed us to propose new models for formation as wall as for fission of AP1-coated transport intermediates at the TGN. Further we gained new insights on AP3 coats and the possible involvement of septin filaments in AP3-dependent endosomal maturation.

Les lipides « switch » - bascules - appartiennent à la famille des matériaux sensibles à un stimulus. Quand ces lipides bascules sont incorporés aux nanoparticules lipidiques (LNP), ils permettent la délivrance contrôlée grâce à un changement de conformation activé par une baisse de pH. Des expériences précédentes avaient démontré que les LNP bascules ont transfecté le petits ARN interférents (siRNA) in vitro et in vivo, silençant la protéine fluorescente verte (GFP) et la protéine hépatique Facteur VII, respectivement. La double administration de micro ARN (miRNA) et d'agent anticancéreux melphalan a également été réalisée par les LNP bascule sur un modèle de rétinoblastome murin. Ces résultats prometteurs nous ont encouragé à élargir les applications de LNP bascules en tant que vecteur de siRNA. De plus, le mécanisme par lequel les LNP bascules induisent la déstabilisation de la membrane et la libération de matériaux encapsulé au milleu acide reste obscur. La compréhension de ce mécanisme est cruciale pour cerner les avantages et les limites des LNP bascules, pour proposer des futures applications et pour prévenir leur toxicité. Dans ce mémoire, nous avons comme objectif d’évaluer le potentiel des LNP bascules pour le traitement du cancer. Nous avons évalué les LNP bascules comme vecteur de livraison du siRNA ciblant l'une des protéines cancéreuses les plus spécifiques découvertes à ce jour, la survivine. En parallèle, nous avons étudié le comportement biophysique des membranes contenant des lipides bascules dans des vésicules de taille micromètrique. Dans la première étude, nous avons démontré que les LNP bascules ont permis le silençage de la survivine dans une gamme de lignées cellulaires cancéreuses (poumon, cervical, ovaire, sein, côlon, rétinoblastome). Dans les cellules du rétinoblastome humain (Y79), nous avons examiné plusieurs agents cytotoxiques utilisés en clinique quant à leur synergie avec le silençage de la survivine: melphalan, topotécan, téniposide et carboplatine. Le prétraitement avec les LNP chargées de siRNA-survivine a amélioré de manière synergique la cytotoxicité du carboplatine et du melphalan mais dans une moindre mesure celle du topotécan et du téniposide. Cet effet était spécifique aux cellules cancéreuses car les cellules saines (ARPE.19) n'exprimaient pas de survivine. L'inhibition de la survivine par silençage de siRNA s'est révélée plus spécifique et moins dommageable pour les cellules saines (ARPE.19) que le YM155, un inhibiteur moléculaire de la survivine. Dans la deuxième étude, nous avons observé par microscopie confocale que les lipides bascules induisaient rapidement le stress, la fission et une courbure positive dans les membranes des vésicules unilamellaires géantes lorsqu'elles étaient exposées à des conditions acides. La dynamique de la membrane a été confirmée par des expériences de diffusion dynamique de la lumière (DLS) et de fuite de calcéine. Ces phénomènes ont également été observés lorsque des lipides bascules ont été incorporés dans une membrane hybride polymère/lipide, fournissant des propriétés sensibles au pH aux vésicules hybrides. À notre connaissance, c'est la première fois qu'une vésicule hybride sensible au pH est reportée. Nos résultats corroborent l'applicabilité des LNP bascules en tant qu'agents de vectorisation des siRNA pour le traitement du cancer grâce au silençage de la survivine, en particulier comme adjuvant à la chimiothérapie. L'investigation biophysique a révélé que les lipides bascules agissent sur la fluidité de la membrane, en particulier à pH acide. Cette sélectivité en pH garantit leur biocompatibilité à pH neutre ainsi que la libération efficace et rapide de leur cargo à pH acide. La compatibilité avec les vésicules hybrides polymère/lipide ouvre de nouvelles applications au niveau de vésicules biomimétiques et l'administration de médicaments. / Cationic switchable lipids belong to the class of stimuli-responsive materials. When incorporated in lipid nanoparticles (LNP), switchable LNP promote pH-triggered delivery of payload based on a molecular switch mechanism. Previous studies have demonstrated that switchable LNP successfully delivered small interferring RNA (siRNA) in vitro and in vivo, promoting the silencing of a reporter Green Fluorescencen Protein (GFP) protein and liver-produced factor VII, respectively. Dual delivery of micro RNA (miRNA) and anticancer agent melphalan was also achieved through switchable LNP in a retinoblastoma rat model. These promising results encouraged us to enlarge the applications of switchable LNP as siRNA carrier. Moreover, the mechanism whereby switchable LNP mediate acid-triggered membrane destabilization and, thus, payload release remains elusive. Understanding this mechanism is crucial to draw the advantages and limitations of switchable LNP, and to tailor their future applications and prevent their potential toxicity. In this dissertation, we aimed to further understand the potential of switchable LNP for cancer treatment. We assessed switchable LNP as a siRNA delivery carrier by targeting one of the most specific cancer protein discovered to date, survivin. Meanwhile, we investigated the biophysical behavior of switchable-lipid containing membranes in micron-sized vesicles. In the first study, we demonstrated that switchable LNP efficiently silenced survivin in a range of cancer cell line models (lung, cervical, ovary, breast, colon, retinoblastoma). In retinoblastoma (RB) cells (Y79), several clinically used cytotoxic agents were screened for their synergy with survivin silencing: melphalan, topotecan, Teniposide, and carboplatin. Pretreatment with LNP loaded with siRNA targeted against survivin synergistically enhanced the cytotoxicity of carboplatin and melphalan but in lesser extent topotecan and teniposide. This effect was specific to cancer cells since healthy cells (ARPE.19) did not express survivin. Survivin inhibition through siRNA silencing revealed more specific and less damageable for healthy cells (ARPE.19) than a molecular approach, such as YM155. In the second study, we observed by confocal microscopy that switchable lipids rapidly induced stress, fission, and positive curvature in giant unilamellar vesicles’ membranes when submitted to acidic conditions. The membrane dynamics was confirmed by dynamic light scattering and calcein leakage experiments. Remarkably, these phenomena were also observed when switchable lipids were embedded into a hybrid polymer/lipid membrane, providing pH-sensitive properties to hybrid vesicles. To the best of our knowledge, this is the first time a pH-sensitive hybrid vesicle is reported. Our findings corroborate with the applicability of switchable LNP as siRNA delivery agents for cancer treatment through survivin silencing, especially as an adjuvant to chemotherapy. The biophysical investigation revealed that the switchable lipids act on the membrane fluidity, specifically at acidic pH. This pH selectivity guarantees their biocompatibility at neutral pH as well as its efficient and quick release of their cargo at acidic pH. Their compatibility with hybrid polymer/lipid vesicles opens new applications in biomimetic vesicles and drug delivery.

Die Aufklärung der Prozesse, die zur Zusammensetzung des Influenza A Virus führen, ist Bestandteil für die Bekämpfung dieser Infektionskrankheit. Der Viruspartikel setzt sich aus einer Hülle, der darunter liegenden Matrix und dem Genom zusammen. Das Genom ist als Bündel aus acht Ribunucleoproteinkomplexen organisiert. Die Hülle besteht aus einer Membran, die mit Sphingomyelin und Cholesterol angereichert ist und den darin eingebetteten Membranproteinen Hämagglutinin, Neuraminidase und dem Protonenkanal M2. Die unter der Hülle liegende Matrix wird von einem einzigen Influenzaprotein formiert: Dem Matrixprotein M1. Es spielt eine Schlüsselrolle im Replikationszyklus des Virus in der Zelle. Es interagiert mit dem genetischen Material, mit den Membranproteinen und der Lipidmembran der Hülle. Die vorliegende Arbeit gibt Auskunft, welche Lipide eine Rolle in der M1-MembranWechselwirkung spielen. Die Liste der identifizierten Lipide umfasst neben dem bereits bekannten Phosphatidylserin auch Phosphatidylglycerol und Phosphatidsäure. Verschiedene Phosphatidylinositole konnten ebenfalls identifiziert werden. Als stärkster M1 Bindungspartner trat dabei Phosphatidylinositol-4-Phosphat zutage. Weitere auf Mutanten basierende Untersuchungen zeigten, dass der membranbindende Bereich nicht auf eine einzelne Domäne in M1 festgelegt werden kann. Die N-terminale M1-Domäne mit ihrem Oberflächen-exponierten, positiv geladenen Areal und die C-terminale Domäne interagierten mit Modellmembranen. Das Resultat dieser Interaktionen konnte mittels mikroskopischer Untersuchungen an gigantischen unilamellaren Vesikeln dokumentiert werden. Für M1 und für eine Mutante, die nur aus der N-terminalen M1-Domäne besteht, konnte eine von anderen viralen Proteinen unabhängige homooligomere Organisation auf der Membran gezeigt werden. Diese M1-Cluster könnten während der Zusammensetzung des Viruspartikels als Fundament für die Eingliederung aller weiteren viralen Komponenten dienen. / about the assembly process of the influenza A virus particle is essential for the development of effective approaches for prevention and treatment of this virus infection. The virus particle consists of an envelope, an underlying matrix, and the encapsulated genome. The genetic material is organized as bundle of eight ribonucleoprotein complexes that encode for eleven proteins. The envelope consists of a lipid bilayer that is enriched in sphingomyelin and cholesterol. The viral spike proteins, hemagglutinin and neuraminidase, as well as the proton channel M2 are embedded into this membrane. The matrix can be found below the envelope. It is formed by one single protein, the matrix protein M1. M1 plays a crucial role during the replication of the virus in the cell. It interacts with the genetic material, with the envelope proteins and with the lipid bilayer of the envelope. The results of this study reveal in detail which lipids are targeted by M1. The set of identified lipids contains phosphatylglycerol and phosphatidic acids as new binding partners, beside the known phophatidylserine. Additionally, several phosphatidylinositols were identified. Phosphatidylinositol-4-phosphate was the strongest binding partner from this group. Mutant-based analysis revealed that M1 owns more than one membrane binding site. The positively charged area in the N-terminal and the C-terminal domain mediated membrane association of the respective mutant protein. The final constitution of M1 on the membrane was characterized by confocal fluorescence microscopy on giant unilamellar vesicles. Full length M1 and a mutant that consisted only of the N-terminal part of M1 showed lateral clustering of homooligomers on the vesicle surface. The clusters formed independently of any other viral component. A function as fundament for the incorporation of the other viral components can be assumed for these clusters.

Les vésicules géantes unilamellaires (GUV) permettent d’étudier efficacement les interactions entre les lipides et les peptides. Dans ce manuscrit, il a été montré que les interactions attractives lipides-peptides sont supprimées par l’attachement de polypeptides de type élastine (ELP) sur des peptides riches en arginine et peuvent être modulées par l’auto-assemblage en micelles ainsi que par le nombre de groupements arginine dans la séquence des peptides capables de pénétrer les cellules. De plus, une nouvelle méthode pour former des GUV à partir de systèmes complexes en seulement quelques minutes a été développée. Cette méthode est basée sur le gonflement d’un film de PVA sous une bicouche lipidique. Elle supprime la dégradation des molécules pendant la formation des GUV de lipides synthétiques, tels que des glycolipides et des phospholipides portant des groupements amides, où les méthodes traditionnelles ne réussissent pas à produire des vésicules non endommagées. / Giant Unilamellar Vesicles (GUVs) are a valuable tool to study lipid bilayer-biomolecule interactions in simplified cell-like model systems. In this work, a new method to efficiently form GUVs within minutes from more complex systems was developed. This method is based on swelling of a PVA-film under a lipid bilayer and minimizes damage of involved molecules during GUV formation. It also opens up many interesting perspectives for the formation of GUVs composed from new classes of synthetic lipids, such as glycolipids and amide-bearing phospholipids, where the traditional methods fail to efficiently produce “undamaged” vesicles. GUVs were also used for studying lipid-peptide interactions of a new class of elastin-like polypeptides functionalized with arginine-rich residues. It is shown that attractive interactions between lipids and peptides are suppressed by cargo-attachment and can be tuned by self-assembly into micelles and the arginine-amount of the cell penetrating residue.

Nous démontrons qu'il est possible de former des bicouches fluides non phospholipides en milieu aqueux avec un mélange d'acide palmitique (PA), cholestérol (Chol) et sulfate de cholestérol (Schol) avec une proportion molaire de 30/28/42. Ces liposomes non phospholipidiques peuvent maintenir un gradient de pH (pHinterne 8 / pHexterne 6) sur une période 100 fois plus longue que les liposomes faits de 1-palmitoyl-2-oléoyl-sn-glycéro-3-phosphocholine (POPC) et de cholestérol (60/40 mol/mol). De plus, ces LUV non phospholipidiques protègent l'acide ascorbique d'un milieu oxydant (1 mM de fer (III)). Une fois piégé dans les liposomes, l'acide ascorbique présente une vitesse de dégradation similaire à celle obtenue en l'absence de fer(III). Ces performances illustrent la perméabilité exceptionnellement limitée de ces liposomes, ce qui implique qu'ils peuvent présenter des avantages comme nanocontenants pour certaines applications. D'autre part, des vésicules unilamellaires géantes (GUV pour Giant Unilamellar Vesicles) ont été formées à partir d'un mélange d'acide palmitique et de cholestérol (30/70 mol/mol). Ces GUV sont stables sur l'échelle de temps de semaines, elles ne s'agrègent pas et elles sont sensibles au pH. Afin d'établir la formation des GUV, l'imagerie par microscopie confocale à balayage laser a été utilisée. Deux sondes fluorescentes ont été utilisées: le rouge du Nile, une sonde hydrophobe qui s'insère dans le cœur hydrophobe des bicouches lipidiques, et la calcéine, une sonde hydrophile qui a été emprisonné dans le réservoir interne des GUV. Cette approche a permis l'observation des parois des GUV ainsi que de leur contenu. Ces résultats montrent la possibilité de former de nouveaux microcontenants à partir d'un mélange d'un amphiphile monoalkylé et de stérol. / First, we demonstrate that it is possible to form non-phospholipid fluid bilayers in aqueous milieu with a mixture of palmitic acid (PA), cholesterol (Chol), and cholesterol sulfate (Schol) in a molar proportion of 30/28/42. These non-phospholipid liposomes can sustain a pH gradient (pHinternal 8 / pHexternal 6) 100 times longer than LUVs made of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and cholesterol (60/40 mol/mol). These non-phospholipid LUVs are shown to protect ascorbic acid from an oxidizing environment (1 mM Iron (III)). Once entrapped in these liposomes, ascorbic acid displays a degradation rate similar to that obtained in the absence of Iron (III). This ability illustrates the exceptionally limited permeability of these liposomes, indicating that they can present advantages as nanocontainers for some applications. Second, Giant Unilamellar Vesicles (GUVs) were formed from a mixture of palmitic acid and cholesterol (30/70 mol/mol). These GUVs were stable over weeks, did not aggregate, and were pH-sensitive. In order to establish their formation, confocal laser scanning microscopy imaging was carried out. Two fluorescent probes were used: Nile Red, a hydrophobic probe that inserted in the hydrophobic core of lipid bilayers, and calcein, a hydrophilic probe that was trapped in the GUV internal pool. This approach allowed observation of both the walls of the GUVs as well as their entrapped content. These results show the possibility to form novel microcontainers from a mixture of a monoalkylated amphiphile and sterols.