Humans have two plasminogen activators (PAs), tissue-type plasminogen activator (tPA) and urokinase-type plasminogen activator (uPA), which generate plasmin to breakdown fibrin and other barriers to cell migration. Both PAs are used as pharmaceuticals but their efficacies are limited by their rapid clearance from the circulation, predominantly by parenchymal cells of the liver. At the commencement of the work presented here, the hepatic receptors responsible for mediating the catabolism of the PAs were little understood. tPA degradation by hepatic cell lines was known to depend on the formation of binary complexes with the major PA inhibitor, plasminogen activator inhibitor type-1 (PAI-1). Initial studies presented here established that uPA was catabolised in a fashion similar to tPA by the hepatoma cell line, HepG2. Other laboratories around this time found that the major receptor mediating the binding and endocytosis of the PAs is Low Density Lipoprotein Receptor-related Protein (LRP1). LRP1 is a giant 600 kDa protein that binds a range of structurally and functionally diverse ligands including, activated α2 macroglobulin, apolipoproteins, β amyloid precursor protein, and a number of serpin-enzymes complexes, including PA??PAI-1 complexes. Further studies for the work presented here centred on this receptor. By using radiolabelled binding assays, ligand blots, and Western blots on cultured cells, the major findings are that: (1) basal LRP1 expression on HepG2 is low compared to a clone termed, HepG2a16, but appears to increase in long term culture; (2) a soluble form of LRP1, which retains ligand-binding capacity, is present in human circulation; (3) soluble LRP1 is also present in cerebral spinal fluid where its role in neurological disorders such as Alzheimer??s disease is a developing area of interest; and (4) the release of LRP1 is a mechanism conserved in evolution, possibly as distantly as molluscs. The discovery, identification, and characterisation of soluble LRP1 introduces this protein in the human circulation, and presents a possible further level of regulation for its associated receptor system.

Diss. (sammanfattning) Umeå : Umeå universitet, 2010.

Face à la demande de plus en plus exigeante en terme de qualité et de coût de fabrication des produits manufacturés, la qualification et quantification optimal des défauts acceptables est primordial. Le tolérancement est le moyen de communication permettant de définir les variations géométriques autorisé entre les différents corps de métier intervenant au cours du cycle de fabrication du produit. Un tolérancement optimal est le juste compromis entre coût de fabrication et qualité du produit final. Le tolérancement repose sur 3 problématiques majeures: la spécification (normalisation d'un langage complet et univoque), la synthèse et l'analyse de tolérances. Nous proposons dans ce document de nouvelles méthodes d'analyse et de synthèse du tolérancement tridimensionnel. Ces méthodes se basent sur une modélisation de la géométrie à l'aide de l'outil domaine jeux et écarts développé au laboratoire. La première étape consiste à déterminer les différentes topologies composant un mécanisme tridimensionnel. Pour chacune de ces topologies est définie une méthode de résolution des problématiques de tolérancement. Au pire des cas, les conditions de respect des exigences fonctionnelles se traduisent par des conditions d'existence et d'inclusions sur les domaines. Ces équations de domaines peuvent ensuite être traduites sous forme de système d'inéquations scalaires. L'analyse statistique s'appuie sur des tirages de type Monte-Carlo. Les variables aléatoires sont les composantes de petits déplacements des torseur écarts défini à l'intérieur de leur zone de tolérance (modélisée par un domaine écarts) et les dimensions géométriques fixant l'étendue des jeux (taille du domaine jeux associé). A l'issue des simulations statistiques, il est possible d'estimer le risque de non-qualité et les jeux résiduels en fonction du tolérancement défini. Le développement d'une nouvelle représentation des domaines jeux et écarts plus adapté, permet de simplifier les calculs relatifs aux problématiques de tolérancement. Le traitement local de chaque topologie élémentaire de mécanisme permet d'effectuer le traitement global des mécanismes tridimensionnels complexes avec prise en compte des jeux. / As far as the demand in quality and cost of manufacturing increase, the optimal qualification and quantification of acceptable defects is essential. Tolerancing is the means of communication between all actors of manufacturing. An optimal tolerancing is the right compromise between manufacturing cost and quality of the final product. Tolerancing is based on three major issues: The specification (standardization of a complete and unequivocal language), synthesis and analysis of the tolerancing. We suggest in this thesis some new analysis and synthesis of the three-dimensional tolerancing. These methods are based on a geometric model define by the deviations and clearances domains developed on the laboratory. The first step consists in determining the elementary topology that composes a three-dimensional mechanism. For each kind of these topologies one resolution method is defined. In worst case, the condition of functional requirement respect is traduced by existence and inclusions conditions on the domains. Then these domains equations can be translated in inequalities system of scalar. The statistical analysis uses the Monte-Carlo simulation. The random variables are the small displacements components of the deviation torsor which is defined inside its tolerance area (model by a deviations domain) and the geometrics dimensions which set the extent of clearance (size of the clearance domain). Thanks to statistical simulation, it is possible to estimate the non-quality rate in regards to the defined tolerancing. The development of a new representation of clearances and deviations domains most suitable, allows us to simplify the calculation for tolerancing problems. The local treatment of elementary topology makes enables the global treatment of complex three-dimensional mechanisms with take into account of clearances.

Complicações renais e urológicas incluindo nefrolitíase, cristalúria, cólica renal e lombalgia, são eventos adversos bem conhecidos do indinavir (IDV), um inibidor de protease (IP) largamente utilizado no tratamento de pacientes infectados com o vírus da imunodeficiência humana (HIV). Prévios estudos em ratos demonstraram que o IDV, um potente IP capaz de provocar uma sustentada supressão da carga viral do HIV, induz vasoconstricção renal, diminui a filtração glomerular (RFG) e reduz a excreção urinária de nitrito (NO2-), sugerindo que a vasoconstricção causada pelo IDV deve ser mediada pelo óxido nítrico (NO). Os objetivos deste estudo foram investigar a ocorrência de insuficiência renal (clearance de creatinina < 80ml/min) em pacientes com infecção pelo HIV tratados com terapia anti-retroviral altamente potente incluindo o inibidor de protease IDV, e mensurar a excreção urinária de nitrato (NO3-) nestes pacientes, comparando-os com outro grupo de pacientes tratados com efavirenz (EFV), um inibidor de transcriptase reversa não-análogo de nucleosídeo (NNRTI). No período compreendido entre março de 2000 e outubro de 2003, estudamos 36 pacientes infectados pelo HIV que estavam em terapia com IDV na dose de 800 mg de 8/8 horas por pelo menos 12 meses. Os pacientes foram avaliados para uma variedade de parâmetros clínicos e laboratoriais: idade, peso, tempo de infecção, tempo de uso de IDV, uso de sulfametoxazol-trimetoprim (SMX-TMP) ou sulfadiazina, exames bioquímicos (colesterol total, triglicérides, magnésio, sódio, potássio e creatinina), exame do sedimento urinário, clearance de creatinina, osmolaridade urinária, volume urinário de 24 h, fração de excreção de sódio (FENa), fração de excreção de potássio (FEK) e fração de excreção de água (FEH2O). NO3 urinário foi mensurado em 18 pacientes recebendo terapia anti-retroviral com IDV e 8 pacientes recebendo terapia com EFV. Leucocitúria ocorreu em 78.8% dos pacientes tratados com IDV. Clearance de creatinina diminuído foi observado em 21 pacientes e foi associado com menor peso e uso de derivados de sulfa. Nestes pacientes com diminuição da função renal, também detectamos menor osmolaridade urinária e uma FEH2O mais alta. A excreção urinária de NO3- foi significativamente menor nos pacientes tratados com IDV (908 ± 181) quando comparados aos pacientes do grupo EFV (2247 ± 648, p<0.01). Nossos resultados mostram que insuficiência renal ocorreu em 58% dos pacientes tratados com IDV e foi associada com menor peso corpóreo e uso de derivados de sulfa. A menor excreção urinária de NO3- e as alterações na osmolaridade e FEH2O sugerem que o IDV diminui a produção de óxido nítrico e causa dano tubular, respectivamente. Sugerimos então que os pacientes em uso de IDV sejam monitorados routineiramente para função renal através do clearance de creatinina. / Renal and urological complications including nephrolithiasis, crystalluria, renal colic and flank pain are significant side effects of the HIV protease inhibitor indinavir (IDV), and IDV has been widely used in the treatment of human immunodeficiency virus (HIV) infection. Previous studies in rats demonstrated that IDV, a potent protease inhibitor that causes profound and sustained supression of HIV replication, also induces renal vasoconstriction, decreases glomerular filtration rate (GFR) and reduces urinary excretion of nitrite (NO2-), suggesting that IDV-vasoconstriction may be mediated by nitric oxide (NO). The objectives of this study were to investigate the occurrence of renal failure (creatinine clearance <80ml/min) in human HIV patients treated with highy active antiretroviral therapy (HAART), including IDV, and to measure urinary excretion of nitrate (NO3-) in those patients, comparing it with that of another group of patients treated with the non-nucleoside reverse-transcriptase inhibitor efavirenz (EFV). From March 2000 through October 2003, we evaluated 36 patients infected with HIV who was receiving IDV 800 mg q8h for at least 12 months. The patients were assessed for a variety of clinical and laboratory parameters including age, body weight, duration of infection, time of IDV treatment, trimethoprim/sulfamethoxazole (TMP/SMX) or sulfadiazine use, biochemistry (total cholesterol, triglycerides, magnesium, sodium, potassium and creatinine), urinalysis, creatinine clearance, urine osmolality, 24-hour urine volume, fractional excretion of sodium (FENa), potassium (FEK) and water (FEH2O). Urinary NO3 was measured in 18 IDV-treated patients and compared with that of 8 EFV-treated patients. Leukocyturia occurred in 78.8% of the IDV-treated patients. Reduced creatinine clearance was observed in 21 patients and was associated with lower body weight and sulfa-derivated use. In these renal failure patients, we also detected a lower osmolality and a higher FEH2O. Excretion of NO3- was significantly lower in IDV-treated patients (908 ± 181) than in EFV-treated patients (2247 ± 648, p<0.01). Our data show that renal failure occurred in 58% of IDV-treated patients and was associated with lower body weight and sulfa administration. The lower NO3- excretion suggests that this drug decreases nitric oxide production, and the alterations in osmolality and FEH2O indicate that it also causes tubular damage. Based on our findings, we suggest that the renal function of patients under IDV treatment should be closely monitored with creatinine clearance.

INTRODUÇÃO: A toxina botulínica tipo A (TXB-A) tem sido testada no tratamento da rinite, principalmente nos casos de rinite idiopática. Sugere-se que um estado de hiper-reatividade do nervo trigêmeo esteja envolvido na fisiopatologia da rinite idiopática. O nervo trigêmeo possui fibras sensitivas não mielinizadas tipo C (FSNMT-C) que contém os neuropeptídeos substância P (SP) e peptídeo relacionado ao gene da calcitonina (CGRP). O óxido nítrico (NO) produzido pelas enzimas óxido nítrico sintase (NOS) também está envolvido nesse processo de neurorregulação nasal. O transporte mucociliar, mecanismo primário de defesa do sistema respiratório, é formado pelo batimento ciliar e muco nasal, e esses componentes podem ser influenciados por diferentes neuropeptídeos e neurotransmissores presentes na mucosa nasal. OBJETIVO: O objetivo deste estudo foi avaliar o efeito da TXB-A sobre a expressão da SP, CGRP e óxido nítrico sintase neural (nNOS), além de sua influência sobre o transporte mucociliar nasal em coelhos. MÉTODOS: Coelhos machos saudáveis da linhagem Nova Zelândia foram divididos em dois grupos: o grupo tratamento recebeu TXB-A (25UI) na concha nasomaxilar (CNM) do lado direito e soro fisiológico a 0,9% (SF0,9%) na CNM esquerda. O grupo controle recebeu SF0,9% na CNM direita e nenhuma intervenção na CNM esquerda. Foram investigados os efeitos da TXB-A sobre a expressão da SP, CGRP e nNOS no tecido de CNM por meio da imuno-histoquímica. Para esta análise, dividiu-se o tecido em camada externa (CE, acima da membrana basal) e camada interna (CI, abaixo da membrana basal). Avaliou-se também a presença de apoptose celular, a frequência de batimento ciliar (FBC), o perfil histoquímico do muco nasal (glicoproteínas ácidas e neutras) e a espessura do epitélio (ESP-CE). RESULTADOS: Foi observado um aumento significativo na quantidade de células apoptóticas na CNM do grupo tratamento que recebeu TXB-A em comparação aos controles (p <= 0,001). A CNM do grupo tratamento que recebeu SF0,9% exibiu um aumento na quantidade de células apoptóticas na CI ao comparar com os controles (CNM SF0,9%, p=0,035) (CNM sem intervenção, p=0,022), e também um aumento da expressão de SP na CE em comparação aos controles (CNM SF0,9%, p=0,021) (CNM sem intervenção, p=0,040). A expressão de CGRP apresentou um aumento na CNM do grupo tratamento que recebeu TXB-A em comparação à CNM sem intervenção (p=0,008). A FBC, expressão de nNOS, perfil histoquímico do muco nasal e ESP-CE não apresentaram diferenças significativas. DISCUSSÃO: O aumento da expressão de CGRP e SP pode ter sido causado por inibição de sua exocitose vesicular pela TXB-A, levando ao seu acúmulo intracelular. Não foram observadas diferenças significativas na FBC ou perfil histoquímico do muco nasal, indicando que o aumento da expressão de CGRP e SP não foi associado à inflamação. O aumento da quantidade de células apoptóticas e da expressão de SP na CNM SF0,9% do grupo tratamento pode ter sido causado por um efeito central da TXB-A. CONCLUSÃO: A administração nasal de TXB-A aumentou a expressão de CGRP e SP, possivelmente por acúmulo intracelular por causa da inibição da sua exocitose, mas sem alterar a FBC e o perfil histoquímico do muco nasal / INTRODUCTION: Botulinum toxin type A (BoNT-A) has been assessed in the treatment of rhinitis, especially in cases of idiopathic rhinitis. Trigeminal hyper-responsiveness appears to be involved in the pathological process of idiopathic rhinitis. Trigeminal nociceptive type C unmyelinated sensory fibers contain the neuropeptides calcitonin gene-related peptide (CGRP) and substance P (SP). Nitric oxide (NO) produced by the enzyme nitric oxide synthase (NOS) are also involved in this nasal neurorregulation process. The mucociliary clearance, primary defense system of the respiratory system, is composed by the ciliary beat and nasal mucus. These components can be influenced by different nasal neuropeptides and neurotransmitters. OBJECTIVE: The aim of this study was to evaluate the effect of BoNT-A on the expression of SP, CGRP and neural nitric oxide synthase (nNOS), and its influence on nasal mucociliary clearance in rabbits. METHODS: Healthy New Zealand male rabbits were divided into two groups: the treatment group was challenged with BoNT-A (25UI) in the right nasomaxillary turbinate (NMT) and saline (SF0.9%) in the left NMT. The control group received SF0.9% in the right NMT and no-intervention in the left NMT. We investigated the effects of BoNT-A on SP, CGRP and nNOS expression in the NMT tissue by immunohistochemistry. Each area of interest was subdivided into an internal layer (IL: below the basement membrane) and outer layer (OL: above the basement membrane) for analysis. It was also assessed signs of cellular apoptosis, ciliary beat frequency (CBF), mucus histochemical profile (acidic and neutral glycoproteins) and epithelial thickness (EP-TH). RESULTS: It was observed a significant increase in the amount of apoptotic cells in the BoNT-A-challanged NMT compared with controls (p <= 0.001). The NMT of treatment group which received only SF0.9% showed an increase in the amount of apoptotic cells in the IL compared with controls (NMT SF0.9%, p = 0.035) (NMT no-intervention, p = 0.022), and also an increase in the SP expression in the OL compared with controls (NMT SF0.9%, p = 0.021) (NMT no-intervention, p = 0.040). CGRP expression showed higher expression in the BoNT-A-challanged NMT compared with no-intervention NMT (p=0.008). The CBF, nNOS expression, mucus histochemical profile and EP-TH did not show significant differences. DISCUSSION: The increased CGRP and SP expression could be due to inhibition of vesicular exocytosis by BoNT-A, leading to CGRP and SP intracellular accumulation. No significant differences in CBF or mucus histochemical profile were observed, indicating that the increased CGRP and SP expression was not associated with inflammation. The increase in the amount of apoptotic cells and SP expression in the SF0.9% NMT of treatment group may be due to a central effect of BoNT-A. CONCLUSION: Nasal administration of BoNT-A increased SP and CGRP expression, possibly via inhibition of their release, but did not change the CBF or mucus profile

Luffa operculata é uma planta medicinal popularmente usada para tratamento de rinites e rinossinusites. A infusão de seu fruto seco é usada no nariz, liberando secreção mucosa profusa, mas pode causar irritação, epistaxe ou anosmia. Avaliamos os efeitos de diferentes concentrações da infusão do fruto seco da Luffa operculata na velocidade de transporte mucociliar (VTM), freqüência de batimento ciliar (FBC), diferença de potencial transepitelial (DPT) e morfologia do epitélio (microscopia de luz e eletrônica de transmissão), no modelo do palato isolado de rã. Os resultados apontam para dano epitelial dose-dependente no epitélio mucociliar, sugerindo que ela seja potencialmente nociva à mucosa nasal humana / Luffa operculata is a medicinal plant popularly used for treatment of rhinitis and rhinosinusitis. Its dry fruit infusion is used into the nose, delivering profuse mucous secretion, but may cause nasal mucosa irritation, epistaxis or anosmia. We evaluated the effects of different concentrations of Luffa operculata dry fruit infusion on mucociliary transport velocity (MTV), ciliary beat frequency (CBF), transepithelial potential difference (TPD) and epithelial morphology (light and electron transmission microscopy) of the isolated frog palate preparation. Results pointed to dose-dependent epithelial damage on mucociliary epithelium, suggesting that it is potentially noxious to the human nasal mucosa

La prédiction des paramètres pharmacocinétiques/toxicocinétiques (PK/TK), tels que la clairance intrinsèque (CLint) et la clairance hépatique (CLh) des médicaments, demeure un défi majeur en modélisation quantitative. Selon « l’hypothèse du médicament libre », seul le médicament libre peut traverser la membrane plasmique et la CLh de ce médicament est calculée en fonction de sa fraction libre (fup). Néanmoins, la captation hépatique facilitée par l’albumine (ALB) représente clairement une violation de « l’hypothèse du médicament libre ». Cette captation hépatique se base sur la possibilité que le complexe ALB-médicament puisse assurer un apport supplémentaire en médicament aux hépatocytes. Ainsi, cela pourrait expliquer en grande partie les sous-prédictions observées de CLh. Par ailleurs, certains médicaments peuvent se lier fortement à plusieurs protéines plasmatiques telles que l’ALB et l’alpha-1-glycoprotéine acide (AGP). Ainsi, la forte liaison d’un même médicament à l’ALB, à l’AGP, ou aux deux, pourrait avoir des répercussions bien distinctes sur la prédiction de ces paramètres PK/TK. Cependant, aucune étude n’a été faite pour simuler la différence entre leurs effets. L’objectif principal de cette thèse est donc d’évaluer (avec plus d’exactitude et de précision), pour une série de médicaments, en condition in vivo (ou in situ), ces répercussions en présence des deux protéines plasmatiques, conjointement ou séparément. En outre, il est indispensable de vérifier si une approche générique en modélisation peut être appliquée. Cette thèse est répartie en trois objectifs spécifiques. Le premier est de proposer un arbre décisionnel pour faciliter la sélection des approches prédictives appropriées de CLhin vivo pour des médicaments ayant des caractéristiques différentes. Le second est d’évaluer les répercussions de fortes liaisons aux deux protéines plasmatiques ALB et AGP sur la CLh de deux xénobiotiques choisis (perampanel (PER) et fluoxétine (FLU)) ; ces médicaments ont de fortes affinités pour les deux protéines et un métabolisme exclusif (ou prédominant) dans le foie. Et, le dernier est de développer et valider un nouveau modèle prédictif de CLh pour les xénobiotiques ayant le potentiel de se lier fortement dans le plasma, à l’ALB ainsi qu’à l’AGP. Dans un premier temps, des données in vitro rapportées chez l’humain ont été colligées pour 19 médicaments (substrats des transporteurs OAT2 et OATP1B1), et ont été ensuite utilisées dans six modèles d’extrapolation in vitro-in vivo (IVIVE) pour prédire lesdits paramètres. Après une comparaison statistique, les résultats ont montré que l’approche 2 (c’est-à-dire « fup-adjusted model ») qui se base sur la captation hépatique facilitée par l’ALB, avait la meilleure performance prédictive. Cependant, l’approche 5 (c’est-à-dire « Extended Clearance Model ») qui se base sur le transport facilité, en était une très pertinente à appliquer pour les substrats de transporteurs membranaires. Lesdits substrats seraient potentiellement moins affectés par l’ALB. Ainsi, un arbre décisionnel a été proposé pour choisir rapidement et judicieusement la meilleure approche IVIVE servant à prédire la CLhin vivo pour chaque xénobiotique en présence de l’ALB. Dans un deuxième temps, les médicaments PER et FLU ont été sélectionnés à partir d’une collecte de données (N= 1907 médicaments) en fonction de certains critères (avoir un métabolisme exclusif ou prédominant dans le foie, pas de transport facilité par les transporteurs membranaires, une haute affinité pour les deux protéines ALB et AGP, et un ratio de liaison à l’AGP sur celle à l’ALB proche de l’unité). Cette sélection a été réalisée pour faire des expériences sur des foies isolés et perfusés de rats (IPRL), en présence et en absence des protéines ALB et AGP (c’est-à-dire quatre scénarios IPRL). Les résultats IPRL ont démontré que PER est faiblement à moyennement métabolisé (extraction hépatique= 0,2-0,7), tandis que FLU est fortement métabolisé (extraction hépatique= 0,8-0,99). Le modèle Michaelis-Menten a été ajusté aux cinétiques métaboliques, et différents paramètres Vmax, Km et Km, u ont été obtenus de ce modèle. À de faibles concentrations libres pour les deux médicaments (c’est-à-dire à des concentrations thérapeutiques) et en présence des protéines plasmatiques, les valeurs de CLint non liée ont augmenté pour PER (avec l’ALB et le mélange des deux protéines (MIX)) et FLU (avec l’ALB, l’AGP et le MIX) par rapport à celles obtenues du scénario sans protéine (sauf pour PER avec AGP, lesdites valeurs ont diminué). Par ailleurs, les calculs des ratios CLint (SANS versus AVEC protéine) ont permis d’indiquer l’occurrence d’une facilitation de la captation hépatique de médicaments par l’ALB ou l’AGP. Ces ratios ont aussi permis de vérifier si la cinétique métabolique pour PER et FLU suivait soit « l’hypothèse du médicament libre » soit celle de « la captation hépatique facilitée par les protéines plasmatiques ». Dans un dernier temps, une nouvelle approche prédictive de CLh (approche WO-to-MIX) est développée en se basant sur une nouvelle notion de liaison fractionnelle et en intégrant dans le « fup-adjusted model » de nouveaux paramètres tels que la fraction liée à l’ALB (fB-ALB) et celle liée à l’AGP (fB-AGP) à partir du scénario MIX. Ce modèle est basé sur la captation facilitée par l’ALB. Contrairement à l’approche WO-to-MIX, le « well-stirred model » (ou modèle conventionnel) est basé sur l’hypothèse du médicament libre. Ensuite, les paramètres Vmax et Km obtenus in situ pour PER et FLU lors des expériences IPRL sans protéines, ont été utilisés en combinaison avec le paramètre intrant de la fraction libre ajustée (fup-adjusted) pour le « fup-adjusted model » ou avec la fraction libre (fup) pour le « well-stirred model ». Une comparaison des performances prédictives globales des deux modèles a été faite. Les performances prédictives du nouveau modèle étaient prometteuses, en particulier pour FLU qui montrait le plus haut degré de captation hépatique médiée par l’ALB, par rapport au modèle conventionnel. L’approche WO-to-MIX est une première validation d’un nouveau modèle d’extrapolation proposé pour les médicaments comme FLU qui se lient à l’ALB et à l’AGP. Néanmoins, le modèle conventionnel reste utile à utiliser pour les médicaments comme PER. L’exactitude de prédiction était inférieure pour ce dernier médicament probablement parce que la captation hépatique par l’ALB ne semble pas être maximale, et, par conséquent, l’utilisation de fup-adjusted a surestimé la CLhin vivo. Par conséquent, plus de travail est nécessaire en particulier pour PER. Cette thèse démontre qu’une seule approche générique pour prédire la CLh n’existe pas. Néanmoins, le choix d’une approche IVIVE ayant une performance prédictive satisfaisante est maintenant possible. Les résultats de cette thèse contribuent à : 1) mieux comprendre les répercussions sur les paramètres PK/TK de la forte liaison des médicaments à l’ALB et à l’AGP ; 2) choisir la meilleure approche prédictive de CLh sur la base de l’affinité du xénobiotique (médicament ou contaminant) pour chacune des protéines plasmatiques et des mécanismes impliqués dans le foie ; et 3) prédire la CLh avec précision et exactitude des xénobiotiques qui se lient aux deux protéines plasmatiques. Ces approches IVIVE pour la CLh pourront assurément être intégrées dans des modèles PK/TK à base physiologique pour les xénobiotiques afin d’améliorer la prédiction de leur pharmacocinétique et d’accélérer le processus de développement de médicaments. / The prediction of pharmacokinetic/toxicokinetic (PK/TK) parameters such as intrinsic clearance (CLint) and hepatic clearance (CLh) for highly bound drugs is a major challenge in quantitative modeling. According to the ‘free drug hypothesis’, only the free drug can pass through the plasma membrane and the CLh of this drug is calculated according to its free fraction (fup). Nevertheless, the hepatic uptake facilitated by albumin (ALB) is a violation of the ‘free drug hypothesis’. This facilitated hepatic uptake is based on the possibility that the ALB-drug complex may provide additional drug intake to the hepatocytes. Thus, this could largely explain the underpredictions of CLh. In addition, some drugs can bind extensively in plasma, and to several plasma proteins such as ALB and alpha-1-glycoprotein acid (AGP). Thus, the high binding of the same drug to either ALB or AGP, or to both, could have distinct impacts on the prediction of these PK/TK parameters. However, no study has yet explored how to simulate the difference between these impacts. The main objective of this thesis is therefore to evaluate (with accuracy and precision) for a series of drugs, in the in vivo (or in situ) condition, these impacts in the presence of the two plasma proteins, jointly or separately. Also, it is important to verify if a generic model can be applied. This thesis is divided into three specific objectives. The first is to propose a decision tree to facilitate the selection of appropriate predictive approaches of CLhin vivo for drugs with different characteristics. The second is to assess the impacts of extensive binding to the two plasma proteins ALB and AGP on the CLh of two selected xenobiotics (perampanel (PER) and fluoxetine (FLU)); these drugs have strong affinities to both proteins and an exclusive (or predominant) metabolism in the liver. And the last objective is to develop and validate a new predictive model of CLh for xenobiotics with the potential to bind extensively to ALB as well as to AGP. Firstly, in vitro data obtained in humans were collected for 19 drugs (i.e. substrates of OAT2 and OATP1B1 transporters) and were then used in six in vitro-to-in vivo (IVIVE) extrapolation models to predict these PK/TK parameters. After a statistical comparison, the results showed that the approach 2 (i.e. ‘fup-adjusted model’) that is based on the ALB-facilitated hepatic uptake, had the best predictive performance. However, the approach 5 (i.e. ‘Extended Clearance Model’) that is based on the membrane transporter-mediated uptake, was very relevant to apply for the substrates of membrane transporters. These substrates would potentially be less affected by ALB. Thus, a decision tree has been proposed to quickly and judiciously select the best IVIVE approach to predict CLhin vivo for each xenobiotic in the presence of ALB. Secondly, the PER and FLU drugs were selected from a data collection of 1907 drugs depending on certain criteria (exclusive or predominant metabolism in the liver, no transport facilitated by membrane transporters, high affinity for the two proteins ALB and AGP, and having a binding ratio between AGP and ALB close to the unity). This selection was made to conduct experiments using the isolated and perfused rat liver (IPRL) apparatus, in the presence, and in the absence of the ALB and AGP proteins (i.e. four IPRL scenarios). The IPRL results showed that PER is low to moderately metabolized (hepatic extraction= 0.2-0.7), while FLU is highly metabolized (hepatic extraction= 0.8-0.99). The Michaelis-Menten model was fitted to the obtained metabolic kinetics, and different parameters Vmax, Km and Km, u were obtained from the model. At low free concentrations for both drugs (i.e. therapeutic concentrations) and in the presence of plasma proteins, the values of unbound CLint increased for PER (with ALB and the mixture of the two proteins (MIX)) and FLU (with ALB, AGP and MIX); when compared to those obtained from the protein-free scenario (except for PER with AGP, the unbound CLint values decreased). In addition, the calculations of CLint ratios (WITHOUT versus WITH protein) indicated the occurrence of a hepatic uptake facilitated by ALB or AGP. These ratios also helped in verifying whether the metabolic kinetics for PER and FLU followed either ‘the free drug hypothesis’ or that of ‘plasma protein-facilitated hepatic uptake’. Finally, a new predictive approach of CLh (WO-to-MIX approach) was developed based on a new notion of fractional binding and incorporating new parameters such as the ALB bound fraction (fB-ALB) and the AGP bound fraction (fB-AGP) from the MIX scenario into the ‘fup-adjusted model’. This model is based on the ‘ALB-facilitated hepatic uptake’. Unlike the WO-to-MIX approach, the ‘well-stirred model’ is based on ‘the free drug hypothesis’. Then, the Vmax and Km parameters that were obtained in situ for PER and FLU from the protein-free IPRL experiments, were used in combination with the fup-adjusted input parameter for the ‘fup-adjusted model’ or with the free fraction (fup) for the ‘well-stirred model’. A comparison of the two models’ overall predictive performances was made. The predictive performances of the new model were promising for FLU, which showed the highest degree of ‘ALB-mediated hepatic uptake’, compared to the conventional model. This WO-to-MIX approach is a first validation of a novel extrapolation model suggested for drugs such as FLU that bind to both ALB and AGP. The well-stirred model remains however a useful tool to predict the clearance for drugs such as PER. The prediction accuracy was lower for the latter drug probably because the ALB-mediated hepatic uptake does not seem to be maximal, and, hence, the use of fup-adjusted has overestimated its CLhin vivo. Therefore, more work is needed particularly for PER. This thesis shows that a generic approach to predict the CLh in vivo does not exist. Nevertheless, the choice of an IVIVE approach with satisfactory predictive performances is now possible. The results of this thesis contribute to: 1) better understand the impacts on the PK/TK parameters of extensive drug binding to ALB and AGP; 2) choose the best predictive approach to CLh based on the affinity of xenobiotic (drug or contaminant) to each of the plasma proteins and the mechanisms involved in the liver; and 3) predict accurately and with precision the output CLh of xenobiotics that bind to the two plasma proteins. These IVIVE approaches for CLh can certainly be integrated into physiologically based PK/TK models for xenobiotics to improve the prediction of their pharmacokinetics and to accelerate the drug development process.

Le diabète de type 2 (DT2) est une maladie chronique affectant 3 millions de canadiens. Une augmentation progressive de la résistance à l'insuline (RI) et de la sécrétion d'insuline est observée chez des sujets normoglycémiques bien avant la survenue du DT2. La moindre fonction du tissu adipeux blanc (TAB) est centrale dans le développement du DT2 car elle accroît le flux d'acides gras vers les tissus périphériques, y induisant la RI, l'hyperinsulinémie et l’inflammation chronique. Durant ma maîtrise, nous avions démontré que les lipoprotéines de basses densité (LDL) natifs réduisent la différentiation et la fonction des adipocytes et induisent la dysfonction du TAB humain. De plus, nous avions montré qu'un taux plasmatique élevé d'apolipoprotéine B (apoB), indiquant un nombre élevé d'apoB-lipoprotéines dont principalement les LDL, est associé à la RI, la sécrétion d'insuline gluco-stimulée (SIGS) élevée, la clairance plasmatique retardée des gras alimentaires et la moindre fonction du TAB chez 81 sujets obèses non diabétiques. Afin de déterminer si l'apoB plasmatique permet aussi d'identifier les sujets obèses répondant le mieux à une diète hypocalorique en termes de réduction des facteurs de risque du DT2, nous avons testé l'effet d'une intervention hypocalorique de six mois. Parmis 59 sujets qui ont terminés l’intervention, nous avons mesuré une diminution de la SIGS et une amélioration de la fonction du TAB seulement chez les sujets avec apoB plasmatique élevée. Toutefois, les mécanismes de ces effets délétères possibles des apoB-lipoprotéines n'avaient pas été explorés. Des évidences suggèrent que l'activation chronique de l'inflammasome Nucleotide- binding domain and Leucine-rich repeat Receptor containing a Pyrin domain 3 (NLRP3) et la sécrétion d'interleukine-1b (IL-1b) promeuvent la dysfonction du TAB et la RI systémique. Cependant, les signaux métaboliques induisant l'inflammasome NLRP3 dans le TAB humain sont inconnus. Afin de tester si l'activation de l'inflammasome NLRP3/système IL-1b participe au mécanisme précédemment identifié liant les apoB-lipoprotéines et les facteurs de risque du DT2, nous avons investigué l'association et l'effet direct des apoB-lipoprotéines sur le système IL-1b. Nous avons démontré chez 81 sujets obèses non-diabétiques que les individus avec apoB plasmatique élevée montrent un taux élevé d'antagoniste du récepteur à l'IL-1 (IL-1Ra) plasmatique, un marqueur de l'activation systémique de la voie IL-1b. Aussi, les associations entre l'apoB plasmatique élevée et la RI et SIGS étaient statistiquement dépendantes des niveaux d'IL-1Ra plasmatique. Dans une autre population de 32 sujets, nous avons démontrés que ceux avec apoB plasmatique élevée ont une sécrétion augmentée d'IL-1b par le TAB ex vivo. Les relations entre l'apoB plasmatique, la clairance plasmatique retardée des gras alimentaires et la sécrétion de C-peptide glucostimulée étaient statistiquement dépendantes de la sécrétion d'IL- 1b du TAB. Puis, les LDL natifs ajoutés au TAB ex vivo induisaient la sécrétion d'IL-1b, y agissant en tant que signaux d'amorçage (1er signal de l'inflammasome NLRP3/système IL-1b). En conclusion, ces résultats suggèrent que les LDL natifs, forme principale d'apoB- lipoprotéines, régulent positivement l'inflammasome NLRP3 du TAB humain. Ceci pourrait expliquer la dysfonction du TAB, l'hyperinsulinémie et l'incidence élevée du DT2 présents chez les sujets avec apoB plasmatique élevée. En outre, ils suggèrent que l'apoB plasmatique élevée pourrait être un biomarqueur permettant d'identifier les sujets obèses qui répondraient le mieux à la diète hypocalorique afin de réduire le risque de DT2. / Type 2 diabetes (T2D) is chronic disease affecting 3 million Canadians and a new case is diagnosed every 3 minutes in Canada. Long before the onset of T2D, a progressive increase in insulin resistance (IR) and insulin secretion is observed in normoglycemic subjects. A decreased white adipose tissue (WAT) function is central to the development of T2D as it promotes an increased fatty acid flux to peripheral tissues, inducing IR, hyperinsulinemia and chronic inflammation. During my MSc, we reported that low density lipoproteins (LDL) reduce the differentiation and function of adipocytes and induce the dysfunction of human WAT. Moreover, we showed that elevated plasma apolipoprotein B (apoB), indicating high numbers of circulating apoB-lipoproteins mainly in the form of LDL, is associated to IR, elevated glucose-induced insulin secretion (GIIS), delayed postprandial plasma clarance of fat and reduced WAT function in 81 non-diabetic obese subjects. To explore whether apoB also identifies obese subjects who best respond to weight loss to reduce risk factors for T2D, we tested the effect of a 6 months hypocaloric diet. We showed in the 59 completers of the hypocaloric intervention that the decrease in GIIS and increase in WAT function were significant in subjects with high plasma apoB but not in subjects with low plasma apoB. However, the mechanism underlying the negative effects apoB-lipoproteins was yet unexplored. Chronic activation of the Nucleotide-binding domain and Leucine-rich repeat Receptor containing a Pyrin domain 3 (NLRP3) inflammasome and secretion of interleukin-1b (IL-1b) promote WAT dysfunction and systemic IR. However, endogenous metabolic signals that induce the activation of WAT NLRP3 inflammasome are unknown. To test if the activation of the NLRP3 inflammasome/ IL-1b system is an underlying mechanism linking apoB- lipoproteins to risk factors for T2D, we examined the association and direct effect of apoB- lipoproteins on the IL-1b system. We observed in our cohort of 81 non-diabetic obese subects that subjects with high plasma apoB have higher plasma IL-1 receptor antagonist (IL-1Ra), which is an marker of systemic activation of the Il-1b pathway. Furthermore, the associations between high plasma apoB and IR and GIIS were statistically dependent on plasma IL-1Ra. Additionnaly, in a separate population of 32 subjects, we demonstrated that subjects with high plasma apoB have higher ex vivo WAT IL-1b secretion. The relation between plasma apoB and delayed postprandial plasma fat clearance and elevated glucose-induced C-peptide secretion were statistically dependent on WAT IL-1b secretion. Finally, native LDLs directly induce IL- 1b secretion from ex vivo WAT, acting primarily as priming signals (i.e. the first signal leading to activation of the NLRP3 inflammasome/ IL-1b system). In conclusion, the findings from this thesis suggest that native LDL, the main form of apoB-lipoproteins, upregulate human WAT NLRP3 inflammasome. This may explain WAT dysfunction, hyperinsulinemia and higher incidence of T2D in subjects with high plasma apoB. Moreover, they suggest that high apoB may serve as biomarker to identify obese subjects who best respond to a hypocaloric-intervention to reduce the risk of T2D.

MESHWR / Department of Hydrology and Water Resources / See the attached abstract below

Die vorliegende Arbeit beschäftigt sich mit der Konzeptionierung und Entwicklung eines neuartigen Fahrerassistenzsystems für Nutzfahrzeuge, welches die lichte Höhe von vor dem Fahrzeug befindlichen Hindernissen berechnet und über einen Abgleich mit der einstellbaren Fahrzeughöhe die Passierbarkeit bestimmt. Dabei werden die von einer Monokamera aufgenommenen Bildsequenzen genutzt, um durch indirekte und direkte Rekonstruktionsverfahren ein 3D-Abbild der Fahrumgebung zu erschaffen. Unter Hinzunahme einer Radodometrie-basierten Eigenbewegungsschätzung wird die erstellte 3D-Repräsentation skaliert und eine Prädiktion der longitudinalen und lateralen Fahrzeugbewegung ermittelt. Basierend auf dem vertikalen Höhenplan der Straßenoberfläche, welcher über die Aneinanderreihung mehrerer Ebenen modelliert wird, erfolgt die Klassifizierung des 3D-Raums in Fahruntergrund, Struktur und potentielle Hindernisse. Die innerhalb des Fahrschlauchs liegenden Hindernisse werden hinsichtlich ihrer Entfernung und Höhe bewertet. Ein daraus abgeleitetes Warnkonzept dient der optisch-akustischen Signalisierung des Hindernisses im Kombiinstrument des Fahrzeugs. Erfolgt keine entsprechende Reaktion durch den Fahrer, so wird bei kritischen Hindernishöhen eine Notbremsung durchgeführt. Die geschätzte Eigenbewegung und berechneten Hindernisparameter werden mithilfe von Referenzsensorik bewertet. Dabei kommt eine dGPS-gestützte Inertialplattform sowie ein terrestrischer und mobiler Laserscanner zum Einsatz. Im Rahmen der Arbeit werden verschiedene Umgebungssituationen und Hindernistypen im urbanen und ländlichen Raum untersucht und Aussagen zur Genauigkeit und Zuverlässigkeit des Verfahrens getroffen. Ein wesentlicher Einflussfaktor auf die Dichte und Genauigkeit der 3D-Rekonstruktion ist eine gleichmäßige Umgebungsbeleuchtung innerhalb der Bildsequenzaufnahme. Es wird in diesem Zusammenhang zwingend auf den Einsatz einer Automotive-tauglichen Kamera verwiesen. Die durch die Radodometrie bestimmte Eigenbewegung eignet sich im langsamen Geschwindigkeitsbereich zur Skalierung des 3D-Punktraums. Dieser wiederum sollte durch eine Kombination aus indirektem und direktem Punktrekonstruktionsverfahren erstellt werden. Der indirekte Anteil stützt dabei die Initialisierung des Verfahrens zum Start der Funktion und ermöglicht eine robuste Kameraschätzung. Das direkte Verfahren ermöglicht die Rekonstruktion einer hohen Anzahl an 3D-Punkten auf den Hindernisumrissen, welche zumeist die Unterkante beinhalten. Die Unterkante kann in einer Entfernung bis zu 20 m detektiert und verfolgt werden. Der größte Einflussfaktor auf die Genauigkeit der Berechnung der lichten Höhe von Hindernissen ist die Modellierung des Fahruntergrunds. Zur Reduktion von Ausreißern in der Höhenberechnung eignet sich die Stabilisierung des Verfahrens durch die Nutzung von zeitlich vorher zur Verfügung stehenden Berechnungen. Als weitere Maßnahme zur Stabilisierung wird zudem empfohlen die Hindernisausgabe an den Fahrer und den automatischen Notbremsassistenten mittels einer Hysterese zu stützen. Das hier vorgestellte System eignet sich für Park- und Rangiervorgänge und ist als kostengünstiges Fahrerassistenzsystem interessant für Pkw mit Aufbauten und leichte Nutzfahrzeuge. / The present work deals with the conception and development of a novel advanced driver assistance system for commercial vehicles, which estimates the clearance height of obstacles in front of the vehicle and determines the passability by comparison with the adjustable vehicle height. The image sequences captured by a mono camera are used to create a 3D representation of the driving environment using indirect and direct reconstruction methods. The 3D representation is scaled and a prediction of the longitudinal and lateral movement of the vehicle is determined with the aid of a wheel odometry-based estimation of the vehicle's own movement. Based on the vertical elevation plan of the road surface, which is modelled by attaching several surfaces together, the 3D space is classified into driving surface, structure and potential obstacles. The obstacles within the predicted driving tube are evaluated with regard to their distance and height. A warning concept derived from this serves to visually and acoustically signal the obstacle in the vehicle's instrument cluster. If the driver does not respond accordingly, emergency braking will be applied at critical obstacle heights. The estimated vehicle movement and calculated obstacle parameters are evaluated with the aid of reference sensors. A dGPS-supported inertial measurement unit and a terrestrial as well as a mobile laser scanner are used. Within the scope of the work, different environmental situations and obstacle types in urban and rural areas are investigated and statements on the accuracy and reliability of the implemented function are made. A major factor influencing the density and accuracy of 3D reconstruction is uniform ambient lighting within the image sequence. In this context, the use of an automotive camera is mandatory. The inherent motion determined by wheel odometry is suitable for scaling the 3D point space in the slow speed range. The 3D representation however, should be created by a combination of indirect and direct point reconstruction methods. The indirect part supports the initialization phase of the function and enables a robust camera estimation. The direct method enables the reconstruction of a large number of 3D points on the obstacle outlines, which usually contain the lower edge. The lower edge can be detected and tracked up to 20 m away. The biggest factor influencing the accuracy of the calculation of the clearance height of obstacles is the modelling of the driving surface. To reduce outliers in the height calculation, the method can be stabilized by using calculations from older time steps. As a further stabilization measure, it is also recommended to support the obstacle output to the driver and the automatic emergency brake assistant by means of hysteresis. The system presented here is suitable for parking and maneuvering operations and is interesting as a cost-effective driver assistance system for cars with superstructures and light commercial vehicles.