• Refine Query
  • Source
  • Publication year
  • to
  • Language
  • 1277
  • 959
  • 228
  • 227
  • 171
  • 125
  • 37
  • 36
  • 29
  • 26
  • 23
  • 22
  • 18
  • 13
  • 12
  • Tagged with
  • 3734
  • 3061
  • 249
  • 216
  • 212
  • 205
  • 201
  • 193
  • 187
  • 178
  • 167
  • 165
  • 165
  • 164
  • 140
  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
451

Plasmídio pOE5 de Escherichia coli do sorogrupo O26: Análise comparativa com outros plasmídios que codificam a hemolisina em E. coli patogênicas. / pEO5 Plasmid of Escherichia coli of O26 serogroup: comparative analysis with other plasmids that encode alpha hemolysin in pathogenic E. coli.

Burgos, Ylanna Kelner 11 September 2009 (has links)
O pEO5, que codifica hemolisina, foi isolado de uma amostra de EPEC do sorotipo O26. Este plasmídio mostrou ser conjugativo e compatível com o pO157, e pelos testes de hibridização observou-se que estes plasmídios não são geneticamente relacionados. Para o estudo comparativo de similaridade foi seqüenciada uma região de 9227 pb de DNA do pEO5 que compreende todo o operon hlyCABD e suas regiões a montante e a jusante. A região do operon hemolitico (7225 pb) e a região promotora do operon foram similares às mesmas regiões do pHly152, que em uma amostra de E. coli isolada de roedor, codifica uma a hemolisina. No entanto, verificou-se a presença de elementos de inserção na região a montante do gene hlyC no pHly152. O pEO5 mostrou ser semelhante a outros plasmídios que também codificam a hemolisina em cepas de EPEC O26 de origem humana e de bovinos. A presença de estruturas semelhantes a transposons em ambas as extremidades do operon a hemolítico do pEO5 indica que esse fator de virulência provavelmente foi adquirido por transferência horizontal de genes. / The conjugative pEO5 encoding haemolysin in strains of EPEC O26 was investigated for its relationship with EHEC haemolysin-encoding of EHEC O26 and O157 strains. pEO5 was found to be compatible with EHEC virulence plasmids and did not hybridize in Southern blots with pO157, indicating that both plasmids were unrelated. A 9227 bp stretch pEO5 DNA encompassing the entire operon hlyCABD was sequenced and compared for similarity to plasmid and chromosomally inherited hly determinants. The a hly determinant of pEO5 (7252 bp) and its upstream region was most similar to corresponding sequences of pHly152, in particular, the structural a-hlyCABD and hlyR regions. pEO5 and hly of EPEC O26 strains from humans and cattle were very similar for the regions encompassing the structural a-hlyCABD. The major difference found between the hly regions of pHly152 and pEO5 is caused by the IS2 upstream of the hlyC in pHly152. The presence of transposonlike structures at both ends of hly sequence indicates that pEO5 was probably acquired by horizontal gene transfer.
452

Plasmídio pOE5 de Escherichia coli do sorogrupo O26: Análise comparativa com outros plasmídios que codificam a hemolisina em E. coli patogênicas. / pEO5 Plasmid of Escherichia coli of O26 serogroup: comparative analysis with other plasmids that encode alpha hemolysin in pathogenic E. coli.

Ylanna Kelner Burgos 11 September 2009 (has links)
O pEO5, que codifica hemolisina, foi isolado de uma amostra de EPEC do sorotipo O26. Este plasmídio mostrou ser conjugativo e compatível com o pO157, e pelos testes de hibridização observou-se que estes plasmídios não são geneticamente relacionados. Para o estudo comparativo de similaridade foi seqüenciada uma região de 9227 pb de DNA do pEO5 que compreende todo o operon hlyCABD e suas regiões a montante e a jusante. A região do operon hemolitico (7225 pb) e a região promotora do operon foram similares às mesmas regiões do pHly152, que em uma amostra de E. coli isolada de roedor, codifica uma a hemolisina. No entanto, verificou-se a presença de elementos de inserção na região a montante do gene hlyC no pHly152. O pEO5 mostrou ser semelhante a outros plasmídios que também codificam a hemolisina em cepas de EPEC O26 de origem humana e de bovinos. A presença de estruturas semelhantes a transposons em ambas as extremidades do operon a hemolítico do pEO5 indica que esse fator de virulência provavelmente foi adquirido por transferência horizontal de genes. / The conjugative pEO5 encoding haemolysin in strains of EPEC O26 was investigated for its relationship with EHEC haemolysin-encoding of EHEC O26 and O157 strains. pEO5 was found to be compatible with EHEC virulence plasmids and did not hybridize in Southern blots with pO157, indicating that both plasmids were unrelated. A 9227 bp stretch pEO5 DNA encompassing the entire operon hlyCABD was sequenced and compared for similarity to plasmid and chromosomally inherited hly determinants. The a hly determinant of pEO5 (7252 bp) and its upstream region was most similar to corresponding sequences of pHly152, in particular, the structural a-hlyCABD and hlyR regions. pEO5 and hly of EPEC O26 strains from humans and cattle were very similar for the regions encompassing the structural a-hlyCABD. The major difference found between the hly regions of pHly152 and pEO5 is caused by the IS2 upstream of the hlyC in pHly152. The presence of transposonlike structures at both ends of hly sequence indicates that pEO5 was probably acquired by horizontal gene transfer.
453

Analysis of O-island deletions in Escherichia coli O157:H7

Flockhart, Allen Forrest January 2012 (has links)
Escherichia coli (E. coli) are a diverse species of bacteria that reside, often harmoniously and beneficially, in the gastrointestinal tracts of humans and other mammals. However, some strains are associated with serious intestinal and extra-intestinal disease and are considered pathogens. The main differences between strains of these different E. coli pathotypes can be explained by the acquisition of genetic information introduced by mobile genetic elements, in particular bacteriophage. In enterohaemorrhagic E. coli (EHEC) O157:H7 strain EDL933, a pathotype of E. coli containing prophage-encoded Shiga toxins associated with severe gastrointestinal and systemic disease in humans, these horizontally acquired elements have been termed O-islands (OIs) and include both fully functional and cryptic prophages. The overall aim of this research was to try and determine what these OIs are actually doing for the bacteria. Systems pertinent in the life cycle and virulence of this pathogen were therefore investigated by phenotypically screening a large library of OI deletions in EHEC strain TUV93-0, a Shiga toxin-negative derivative strain of EDL933, and then comparing these with the parent strain. These analyses highlighted a subset of OIs with the potential to regulate motility and type III secretion (T3S), the latter being an essential colonisation factor for EHEC that is encoded by the locus of enterocyte effacement (LEE). Deletion of OI-51, a 14.93 Kb cryptic prophage designated as CP-933C, significantly reduced persistence of faecal shedding in sheep and levels of T3S expression in vitro. Cloning and complementation together with targeted allelic replacements in OI-51 identified a novel positive regulator of the LEE, encoded by ecs1581 in the sequenced E. coli O157:H7 strain Sakai that is present but not annotated in the EDL933 sequence. Functionally important residues of ECs1581 were identified by site-directed mutagenesis based on phenotypic variants present in strains from different E. coli pathotypes, including strains not harbouring a LEE-encoded T3S system. This regulator was subsequently termed RgdR based on a motif demonstrated to be important for stimulation of gene expression from LEE1. Purified RgdR protein was able to form multiple complexes on a PCR generated LEE1 promoter fragment, and activation of this operon appeared to require this DNA binding capacity as a non-T3S inducing variant was unable to bind this same LEE1 promoter fragment. RgdR did not directly activate LEE1 transcription in vitro, nor did it activate transcription by relieving H-NS repression as proposed for the global regulator Ler (LEE-encoded regulator). However, RgdR activation did require a wild type LEE1 promoter and the Ler auto-induction cycle to induce LEE2-5 expression and T3S. RgdR was able to increase binding to Congo red and was capable of repressing bacterial motility. Further analyses demonstrated that RgdR did not regulate T3S and cell motility via GrlA (global regulator of LEE activator) and QseC (quorum sensing E. coli regulator C), two established regulators in E. coli that control LEE gene expression and motility in conjunction with their partners, GrlR (global regulator of LEE repressor) and QseB (quorum sensing E. coli regulator B) respectively. RgdR is therefore identified as a novel regulator able to co-ordinate T3S and motility expression. This research has identified OI-51 as being important for EHEC O157:H7 colonisation in sheep and has identified a completely new family of small bacterial regulators that control surface factor expression in E. coli.
454

Identificación y genotipificación de Escherichia coli productor de toxina tipo shiga (STEC) presente en puestos de venta de carne de pollo en el distrito de San Juan de Miraflores

Lucas López, Juan Raúl, Lucas López, Juan Raúl January 2016 (has links)
Publicación a texto completo no autorizada por el autor / El documento digital no refiere un asesor / Identifica y genotipifica cepas de STEC aisladas en puestos de venta de carne de pollo en un distrito de Lima. Para ello, se tomó hisopados de la superficie de manos, tablas de picar y mesa de expendio de 50 puestos de venta de carne de pollo en el distrito de San Juan de Miraflores, se realizó el aislamiento microbiológico estándar, identificación molecular de los genes stx1, stx2 y eaeA mediante PCR y la subtipificación genética mediante electroforesis en campo pulsatil (PFGE). El 84% (42/50) y 66% (33/50) de los puestos de venta poseían al menos una de las superficies contaminadas con E. coli y STEC, respectivamente. El 42%(63/150) y 25.3%(38/150) de las muestras fueron positivas a E. coli y STEC, respectivamente. 43 de las 63 cepas de E. coli aisladas fueron patógenas por presentar al menos un gen evaluado. 38 cepas fueron STEC y presentaron los genes stx1 (19.1%;12/63), stx2 (14.3%;9/63) y las asociaciones: stx1 y stx2 (12.7%;8/63); stx1, stx2 y eaeA (6.3%;4/63); stx2 y eaeA (4.8%;3/63); y, stx1 y eaeA (3.2%;2/63). También se identificó E. colieaeA (7.9%;5/63). Veintitrés cepas de STEC fueron evaluadas mediante PFGE las cuales no mostraron ser cepas genéticamente idénticas, perose llegaron a establecer cinco clusters y nueve cepas poco relacionadas epidemiológicamente. Se observaron prácticas de higiene deficientes en el puesto de venta y durante el expendio. Se confirma que los puestos de venta de carne de pollo evaluados son una fuente de contaminación de STEC cuyas cepas difícilmente proceden de un origen común. Es presumible que la manipulación en el puesto de venta y el manejo en expendio favorezcan la contaminación de carne de pollo con STEC en nuestro medio, debiendo fortalecerse las medidas de control a este nivel para salvaguardar la salud pública del consumidor. / Tesis
455

Escherichia coli produtora de toxina de Shiga em carne moída comercializada na cidade de São Paulo, SP / Shiga toxin-producing Escherichia coli in ground beef at retail level at Sao Paulo city, Brazil

Lucatelli, Adriana 24 February 2012 (has links)
Apesar de Escherichia coli O157:H7 ainda ser considerado o principal sorotipo envolvido com surtos de enfermidades veiculadas por alimentos entre as E. coli produtoras de toxina de Shiga (STEC), outros sorogrupos estão ganhando importância, como O26, O45, O103, O111, O121 e O145, que estão sendo denominados de \"Top Six STEC non O157\". As STEC são responsáveis por sintomas que variam de uma simples diarreia até diarreia sanguinolenta, que pode evoluir ainda para síndrome hemolítica urêmica e púrpura trombótica trombocitopênica, podendo ocasionar danos crônicos como falência renal e levar a óbito. Para tanto, apresentam diversos fatores de virulência, entre eles, as toxinas de Shiga (Stx) ou verotoxinas (Vtx). Os veículos destes micro-organismos são diversos alimentos, sendo o principal deles, as carnes moídas. Apesar da importância da carne moída como veículo transmissor de STEC, pouco se conhece sobre a sua presença nesse alimento comercializado na cidade de São Paulo, SP. Sendo assim, o objetivo deste trabalho foi pesquisar a presença de STEC em carne moída comercializada no varejo da cidade de São Paulo e caracterizar tais isolados quanto à presença dos seguintes fatores de virulência: stx1, stx2, eae e ehx. Foram coletadas 248 amostras em diferentes bairros da cidade de São Paulo. Para a detecção de E. coli sorogrupo O157 foi utilizada a metodologia ISO 16654 e para a detecção dos sorogrupos O103, O111, O145 e O26 foi empregada a metodologia descrita pelo Surveillance Group for Diseases and Infections of Animals (NRM 006). Uma amostra de carne moída (0,4%) apresentou o micro-organismo pesquisado. A identificação genotípica e bioquímica caracterizou esse isolado como STEC O157:H7, portador de todos os fatores de virulência pesquisados: stx1, stx2, eae e ehx. Foi constatada, também, a expressão das proteínas stx em células Vero. Esse é o primeiro relato da presença de E. coli O157:H7 produtora de toxina de Shiga em carne moída no Brasil. / Although Escherichia coli O157:H7 is still considered the most important serotype involved in foodborne disease outbreaks among Shiga toxin-producing E. coli (STEC), other serogroups are receiving more attention such as O26, O45, O103, O111, O121 and O145, that are being called the \"Top Six STEC non O157\". STEC are responsible for symptoms ranging from simple diarrhea to bloody diarrhea, which can further evolve to hemolytic uremic syndrome and thrombotic thrombocytopenic purpura, which may cause damage such as chronic renal failure and lead to death. To do so, they have several virulence factors, including the Shiga toxins (Stx) or verotoxins (Vtx). The vehicles of these microorganisms are many foods, most notably, the ground beef. Despite the importance of ground beef as a vehicle for transmitting STEC, little is known about their presence in this kind of food sold in São Paulo, SP. Therefore, the objective of this study was to investigate the presence of STEC in ground beef sold at retail level in Sao Paulo city and characterize the isolates for the presence of the following virulence factors: stx1, stx2, eae and ehx. 248 samples were collected in different districts of Sao Paulo city. For the detection of E. coli O157 serogroup the methodology ISO 16654 was used and for the detection of serogroups O103, O111, O145 and O26 the methodology described by the Surveillance Group for Diseases and Infections of Animals (NRM 006) was used. One sample of ground beef (0.4%) showed the presence of the microorganism studied. The biochemical and genotypical identification characterized this isolate as STEC O157:H7, carrying all of the investigated virulence factors: stx1, stx2, eae and ehx. The expression of stx proteins in Vero cells was also observed. This is the first report on the isolation of E. coli O157:H7 Shiga toxin-producing from ground beef in Brazil.
456

Caracterização da proteína dispersina em amostras de Escherichia coli não pertencentes ao patótipo de E. coli enteroagregativa. / Characterization of the dispersin protein in Escherichia coli strains that do not belong to the enteroagreggative E.coli pathotype.

Monteiro, Bianca Tomé 15 August 2008 (has links)
A proteína dispersina, codificada pelo gene aap, é um dos fatores de virulência de Escherichia coli enteroagregativa (EAEC). A detecção de aap tem sido utilizada juntamente com aggR e aatA no diagnóstico molecular de EAEC. Para verificar sua especificidade, esses genes foram pesquisados em 243 amostras de E. coli diarreiogênica (DEC). Todas as amostras foram negativas para os genes aggR e aatA, enquanto 26 amostras foram positivas para aap. Estas amostras haviam sido descritas como E. coli enteropatogênica atípica, entretanto essa classificação não foi confirmada, uma vez que elas não apresentaram o gene eae. Três amostras aderiram em células HEp-2 no padrão agregativo e foram classificadas como EAEC. O restante constituiu um grupo de amostras sem marcadores que caracterizam os patótipos de DEC. O seqüenciamento do gene aap de 6 amostras demonstrou alta homologia entre as seqüências obtidas e a seqüência da amostra protótipo de EAEC 042. Este estudo revelou que o gene aap não é exclusivo de EAEC. / The protein dispersin, encoded by aap, is one of the virulence factors of enteroaggregative Escherichia coli (EAEC). Detection of aap has been employed along with aggR and aatA in the molecular diagnosis of EAEC. In order to verify their specificity, these genes were searched in a collection of 243 diarrheagenic E. coli (DEC) strains. All of them were negative for aggR and aatA, whereas 26 were positive for aap. These strains have been described as atypical enteropathogenic E. coli. However, this classification was not confirmed since they did not harbor the eae gene. Three strains showed the aggregative adherence pattern to HEp-2 cells and were classified as EAEC. The remaining strains were part of a group that did not harbor any specific markers of DEC pathotypes. The DNA sequence analysis of 6 aap-harboring strains showed high homology between the sequence of these strains and the aap sequence of the EAEC prototype strain 042. This study revealed that aap is not exclusive of EAEC.
457

Relações filogenéticas entre Escherichia coli enteroagregativa e uropatogênica. / Phylogenetic relationship among enteroaggregative and uropathogenic Escherichia coli strains.

Nunes, Kamila Oliveira 16 March 2016 (has links)
Escherichia coli isoladas de infecções do trato urinário (ITU) são conhecidas como E. coli uropatogênicas (UPEC). Dentre as E. coli diarreiogênicas, o patótipo denominado E. coli enteroagregativa (EAEC) é definido pela produção do padrão de adesão agregativa em células epiteliais cultivadas. Estudos recentes mostraram que algumas cepas de UPEC albergam propriedades de virulência de EAEC, indicando que cepas de EAEC podem causar ITU. Assim sendo, o objetivo deste estudo foi analisar as relações filogenéticas entre cepas de EAEC que apresentam marcadores genéticos de E. coli extraintestinais (ExPEC) e cepas de UPEC com e sem marcadores genéticos de EAEC. Para tal, foram selecionadas 92 EAEC, 8 UPEC com e 10 sem marcadores de EAEC. As 92 EAEC foram analisadas quanto à presença dos genes considerados como marcadores de cepas de ExPEC (papA/papC, sfa/foc, afa/dra, iutA, kpsMT II), detectando 30 (32,6%) cepas com esse perfil. Estas 30 cepas foram selecionadas para análises de filogrupos e multilocus sequence type (MLST) junto às cepas de UPEC. Foi observado que 17 (54,4%) cepas de EAEC e 3 (16,6%) de UPEC pertenceram ao filogrupo A, 2 (6,45%) EAEC e 1 (5,5%) UPEC ao filogrupo B1, 3 (9,68%) EAEC e 8 (44,4%) UPEC ao filogrupo B2, 6 (19,35%) EAEC e 2 (11,1%) UPEC ao filogrupo D, 1 (3,2%) EAEC e 4 (22,2%) UPEC ao filogrupo E, 1 (3,2%) EAEC ao filogrupo F e 1 EAEC (3,2%) não pôde ser classificada de acordo com esta metodologia. Comparando os dois grupos de UPEC notou-se que dentre as cepas com marcadores de EAEC 3 (37,5%) pertenceram ao filogrupo E, 2 (25%) aos filogrupos A e D e 1 (12,5%) ao filogrupo B1. Dentre as cepas sem marcadores de EAEC 1 (10%) pertenceu ao filogrupo A, 1 (10%) ao filogrupo E e 8 (80%) ao filogrupo B2. As análises de MLST através do sequenciamento dos genes recA, fumC, icd, mdh, purA, adk e gyrB permitiram determinar 42 sequence types (ST) distintos, dos quais 22 foram descritos neste estudo. Os mais comuns foram o ST 10 (5 cepas) e ST 95 e ST 746 (ambos com 2 cepas cada). A árvore filogenética gerada confirmou esses dados, mostrando o grupamento das cepas de EAEC com marcadores de ExPEC com as cepas de UPEC com marcadores de EAEC. Em resumo, o presente estudo mostrou que um subgrupo de cepas de EAEC está inserido nos mesmos grupos filogenéticos de cepas de UPEC com marcadores de EAEC apresentando, portanto, correlação filogenética. Houve diferenças de distribuição filogenética entre cepas de UPEC com e sem marcador de EAEC. Concui-se que cepas de EAEC podem apresentar potencial uropatogênico, tanto no curso de uma infecção diarreica, quanto em carreadores assintomáticos. / Escherichia coli isolated from urinary tract infections (UTI) are known as uropathogenic E. coli (UPEC). Among the diarrheagenic E. coli, the enteroaggregative E. coli (EAEC) pathotype is defined by the production of the aggregative adherence on cultured epithelial cells. Recent studies have shown that some UPEC strains harbor virulence properties of EAEC, indicating that EAEC strains can cause UTI. Therefore, the aim of this study was to analyze the phylogenetic relationships among EAEC strains that have genetic markers of extraintestinal E. coli (ExPEC) and UPEC strains, with and without genetic markers of EAEC. For that reason, we selected 92 EAEC, 8 UPEC with and 10 without EAEC markers. The 92 EAEC were analyzed for the presence of genes considered as markers for ExPEC strains (papA/papC, sfa/foc, afa/dra, iutA, kpsMT II), detecting 30 (32.6%) strains with that profile. These 30 strains were selected for phylogroup and multilocus sequence type (MLST) analysis with the UPEC strains. It was observed that 17 (54.4%) EAEC and 3 (16.6%) UPEC belonged to the phylogroup A, 2 (6.45%) EAEC and 1 (5.5%) UPEC to the phylogroup B1, 3 (9.68%) EAEC and 8 (44.4%) UPEC to the phylogroup B2, 6 (19.35%) EAEC and 2 (11.1%) UPEC to the phylogroup D, 1 (3.2%) EAEC and 4 (22.2%) UPEC to the phylogroup E, 1 (3.2%) EAEC to the phylogroup F and 1 (3.2%) EAEC could not be classified according to this methodology. Comparing the two groups of UPEC it was observed that among the UPEC strains with EAEC markers, 3 (37.5%) belonged to the phylogroup E, 2 (25%) to the phylogroups A and D and 1 (12.5%) to the phylogroup B1. Among the UPEC strains without EAEC markers, 1 (10%) belonged to the phylogroup A, 1 (10%) to the phylogroup E and 8 (80%) to the phylogroup B2. The MLST analysis by sequencing of recA, fumC, icd, mdh, purA, adk and gyrB genes allowed to determine 42 distinct sequence types (ST), of whom, 22 were described in this study. The most common were ST 10 (5 strains), and ST 95 and ST 746 (both with two strains each). The phylogenetic tree generated confirmed that data, showing the clustering of EAEC strains (harboring ExPEC markers) with the UPEC strains (harboring EAEC markers). In summary, the current study showed that a subgroup of EAEC strains are clustered in the same phylogenetic groups of UPEC strains with EAEC markers and, thus, present phylogenetic correlation. Also, there were differences in phylogenetic distribution among UPEC strains with and without EAEC markers. In conclusion, EAEC strains may have uropathogenic potential, either in the course of a diarrheal infection or in asymptomatic carriers.
458

Papel da proteina Hfq na regulação dos fatores de virulência de Escherichia coli enteropatogênica (EPEC). / Role of Hfq in the regulation of virulence factors in enteropathogenic Escherichia coli.

Ruiz, Renato de Mello 22 October 2014 (has links)
Escherichia coli Enteropatogênicas são um importante patógeno causador de diarréia. As EPEC podem ser classificadas em típica e atípica, baseado na presença do plasmídeo EAF. As amostras de EPEC apresentam em seu genoma uma ilha de patogenicidade denominada região LEE, na qual estão contidos os genes relacionados a formação da lesão (A/E). A regulação gênica da região LEE é multifatorial, sendo o principal regulador o gene ler. Até o momento não existem trabalhos sobre a participação de Hfq em EPEC, assim sendo, o presente estudo analisa o papel de Hfq na regulação dos fatores de virulência de EPEC típica (O127:H6) e atípica (O55:H7). A mutagênese do gene hfq foi obtida através do sistema l Red de recombinação alélica. As amostras mutantes apresentaram uma diminuição na capacidade aderir e formar a lesão A/E. Analise transcricional dos mutantes revelou uma significativa diminuição na transcrição do gene espA e do gene eae. Foi possível evidenciar uma diminuição da motilidade das amostras mutantes. A analise in silico revelou a possibilidade do dobramento natural do mRNA ler, ocultando o sitio de ligação do ribossomo. Aqui demonstramos a necessidade Hfq para a transcrição dos genes responsáveis pela lesão A/E. responsible for the A/E lesion. / Enteropathogenic Escherichia coli are an important pathogen responsible for causing diarrhea. EPEC can be classified as typical and atypical, based on the presence of the EAF plasmid. EPEC strains have in their genome a pathogenicity island known as LEE region, where it harbours genes related to the formation of a lesion A/E. LEE regulation is multifactorial, being the ler gene its main regulator. Until now there are no studies on the role of Hfq in EPEC, thus, the present study analyzes the function of Hfq on the regulation of virulence factors in typical EPEC (O127:H6) and atypical (O55:H7) strains. Hfq gene mutagenesis was obtained utilizing the allelic recombination l Red system. The mutant strains demonstrated a decrease in the capability of mutant strains to adhere and form A/E lesion. Transcriptional analysis showed a decrease on the espA gene and eae gene transcription. It was possible to notice a decrease in motility of the mutant strains. In silico analysis revealed the possibility of a natural folding of ler mRNA, concealing the ribosome binding site. With this study we could demonstrate the need of Hfq for the transcription of genes responsible for the A/E lesion.
459

Comparação entre os métodos físico e químico de permeação e de extração da proteína verde fluorescente (GFPuv) de culturas de Escherichia coli dh5-alpha / Comparison between physical and chemical methods for permeation and extraction of green fluorescent protein (GFPuv) from \'Escherichia coli\' DH5-alpha

Chiarini, Eb 20 August 2002 (has links)
A proteína verde fluorescente (GFPuv), pelo fato de ter como característica a emissão de luz verde fluorescente brilhante quando exposta à luz ultravioleta, tem sido utilizada como marcador em diversos campos de pesquisa. Células transformadas de Escherichia coli DH5-a expressando a GFPuv foram submetidas aos tratamentos: (i) permeação seletiva (congelamento/ descongelamento/ sonicação) associada à extração por partição em três fases (TPP) e posterior purificação em coluna cromatográfica de interação hidrofóbica (HIC), e (ii) extração direta das células por TPP e posterior purificação em coluna HIC. Este trabalho teve por objetivo a extração da GFPuv com a aplicação das metodologias citadas para a extração da proteína, avaliando a influência da permeação seletiva das células de Escherichia coli no processo de extração da GFPuv. Na análise dos resultados observou-se que apesar da permeação seletiva ser uma metodologia mais laboriosa, mostrou-se mais eficiente pela obtenção de aproximadamente 9 vezes mais GFPuv em relação à extração direta das células por TPP. / The green fluorescent protein (GFPuv), for the fact of having as characteristic the emission of brilliant green fluorescent light when exposed to the ultraviolet light, it has been used as marker in several research fields. Transformed cells of Escherichia coli DH5-a expressing GFPuv was subjected to: (i) selective permeation (freezing / thawing/ sonication) associated to the extraction for partition in three phases (TPP) and subsequent purification in hydrophobic interaction chromatography column (HIC), and (ii) direct extraction of the cells for TPP and subsequent purification in HIC column. This work had for objective the extraction of GFPuv with the application of the methodologies mentioned for the extraction of the protein, evaluating the influence of the selective permeation in the cells of Escherichia coli in the process of GFPuv extraction. In the analysis of the results was observed that in spite of the selective permeation to be a more laborious methodology, it was shown more efficient for the obtaining of approximately 9 more times GFPuv in relation to the direct extraction of the cells for TPP.
460

Caracterização da proteína dispersina em amostras de Escherichia coli não pertencentes ao patótipo de E. coli enteroagregativa. / Characterization of the dispersin protein in Escherichia coli strains that do not belong to the enteroagreggative E.coli pathotype.

Bianca Tomé Monteiro 15 August 2008 (has links)
A proteína dispersina, codificada pelo gene aap, é um dos fatores de virulência de Escherichia coli enteroagregativa (EAEC). A detecção de aap tem sido utilizada juntamente com aggR e aatA no diagnóstico molecular de EAEC. Para verificar sua especificidade, esses genes foram pesquisados em 243 amostras de E. coli diarreiogênica (DEC). Todas as amostras foram negativas para os genes aggR e aatA, enquanto 26 amostras foram positivas para aap. Estas amostras haviam sido descritas como E. coli enteropatogênica atípica, entretanto essa classificação não foi confirmada, uma vez que elas não apresentaram o gene eae. Três amostras aderiram em células HEp-2 no padrão agregativo e foram classificadas como EAEC. O restante constituiu um grupo de amostras sem marcadores que caracterizam os patótipos de DEC. O seqüenciamento do gene aap de 6 amostras demonstrou alta homologia entre as seqüências obtidas e a seqüência da amostra protótipo de EAEC 042. Este estudo revelou que o gene aap não é exclusivo de EAEC. / The protein dispersin, encoded by aap, is one of the virulence factors of enteroaggregative Escherichia coli (EAEC). Detection of aap has been employed along with aggR and aatA in the molecular diagnosis of EAEC. In order to verify their specificity, these genes were searched in a collection of 243 diarrheagenic E. coli (DEC) strains. All of them were negative for aggR and aatA, whereas 26 were positive for aap. These strains have been described as atypical enteropathogenic E. coli. However, this classification was not confirmed since they did not harbor the eae gene. Three strains showed the aggregative adherence pattern to HEp-2 cells and were classified as EAEC. The remaining strains were part of a group that did not harbor any specific markers of DEC pathotypes. The DNA sequence analysis of 6 aap-harboring strains showed high homology between the sequence of these strains and the aap sequence of the EAEC prototype strain 042. This study revealed that aap is not exclusive of EAEC.

Page generated in 0.0518 seconds