This study investigated a resident community of Atlantic spotted dolphins (Stenella frontalis) on Little Bahama Bank (LBB) in the Bahamas utilizing a noninvasive molecular approach. Genetic template material was collected and extracted from fecal material of S. frontalis. Fine-scale population structure was found within LBB according to mitochondrial DNA (mtDNA) and microsatellites (Fst = 0.25317, P < 0.0001 and Fst = 0.04491, P < 0.0001, respectively). Three main social clusters (North, Central, South/Roam) exist on LBB and all clusters were found to be genetically distinct according to microsatellite analyses. Mitochondrial haplotypes revealed North and South/Roam were not differentiated, but Central was different from both. When separated by sex, males were less genetically structured than females. Males showed no evidence of structure according to Ost or Rst. / Females of all clusters were differentiated according to microsatellites whereas mtDNA revealed the same pattern in females as was seen for the total population. The structuring patterns of the sexes clearly indicate a pattern of male dispersal and female philopatry for the LBB population. Genetic investigation of mating revealed patterns in the mating system of S. frontalis on LBB. Genotypes of females and offspring were analyzed and revealed that more than two males were required to explain the progeny arrays, indicating promiscuous mating among females. In addition, paternity assessment assigned seven males as fathers to ten of 29 mother-calf pairs. A pattern of reproductive skew according to age was revealed because reproductively successful males were in the oldest age class at the estimated time of conception of the calves. / Patterns in social cluster mating revealed that males from the Central cluster sired offspring with females from both the Central and North clusters, while Roaming males sired offspring with South and Central females indicating that males mate within their social cluster or with females from the next closest cluster. The study has important implications for cetacean research, specifically delphinids. Fine-scale population structure and mating patterns of male and female S. frontalis were revealed through noninvasive methodology presenting a valuable genetic framework with which to support ongoing investigations of life history, behavior, communication and social structure. / by Michelle Lynn Green. / Vita. / Thesis (Ph.D.)--Florida Atlantic University, 2008. / Includes bibliography. / Electronic reproduction. Boca Raton, FL : 2008 Mode of access: World Wide Web.

Wong Kai Yan Cyrus. / "Architecture Department, Chinese University of Hong Kong, Master of Architecture Programme 2008-2009, design report." / Includes bibliographical references.

Dolphins use stereotyped, individually distinctive, frequency modulated whistles, referred to as signature whistles, in order to broadcast their identity. In this study, we trained six dolphins at Kolmården Zoo, Sweden, to be called over, either upon hearing their own signature whistle (SW) or upon hearing a biologically irrelevant ”trivial” sound (TS), with the aim to prove the Whistle caller concept. The Whistle caller concept is based on the fact that dolphins occasionally use other dolphins’ signature whistles in order to address specific group members and convene.  Our hypotheses were that (1) dolphins call-over trained using their SW would learn the behaviour faster than dolphins trained using TSs, and (2) dolphins trained with their SW would be able to discriminate between different SWs better than dolphins trained with a TS would be at discriminating between different TSs.  Three out of three dolphins were successfully call-over trained using their SW, and two out of three dolphins using their assigned TS. When discriminating between different sounds, two of the dolphins trained using their SW performed significantly better than one of the dolphins trained using a TS. However, there were large intra-group differences in the results, indicating that we cannot eliminate the possibility that these results stem from individual differences in these dolphins’ ability to learn new behaviours overall, rather than an understanding of the sounds they heard. We suggest that future studies focus on (1) male-female differences in discrimination success when applying the Whistle caller concept, (2) how the characteristics of the trivial sounds affect discrimination success, and (3) the option of calling more than one animal at a time by sending out several SWs in succession.

published_or_final_version / Environmental Management / Master / Master of Science in Environmental Management

<p>Sound is a key sensory modality for Hawaiian spinner dolphins. Like many other marine animals, these dolphins rely on sound and their acoustic environment for many aspects of their daily lives, making it is essential to understand soundscape in areas that are critical to their survival. Hawaiian spinner dolphins rest during the day in shallow coastal areas and forage offshore at night. In my dissertation I focus on the soundscape of the bays where Hawaiian spinner dolphins rest taking a soundscape ecology approach. I primarily relied on passive acoustic monitoring using four DSG-Ocean acoustic loggers in four Hawaiian spinner dolphin resting bays on the Kona Coast of Hawai‛i Island. 30-second recordings were made every four minutes in each of the bays for 20 to 27 months between January 8, 2011 and March 30, 2013. I also utilized concomitant vessel-based visual surveys in the four bays to provide context for these recordings. In my first chapter I used the contributions of the dolphins to the soundscape to monitor presence in the bays and found the degree of presence varied greatly from less than 40% to nearly 90% of days monitored with dolphins present. Having established these bays as important to the animals, in my second chapter I explored the many components of their resting bay soundscape and evaluated the influence of natural and human events on the soundscape. I characterized the overall soundscape in each of the four bays, used the tsunami event of March 2011 to approximate a natural soundscape and identified all loud daytime outliers. Overall, sound levels were consistently louder at night and quieter during the daytime due to the sounds from snapping shrimp. In fact, peak Hawaiian spinner dolphin resting time co-occurs with the quietest part of the day. However, I also found that humans drastically alter this daytime soundscape with sound from offshore aquaculture, vessel sound and military mid-frequency active sonar. During one recorded mid-frequency active sonar event in August 2011, sound pressure levels in the 3.15 kHz 1/3rd-octave band were as high as 45.8 dB above median ambient noise levels. Human activity both inside (vessels) and outside (sonar and aquaculture) the bays significantly altered the resting bay soundscape. Inside the bays there are high levels of human activity including vessel-based tourism directly targeting the dolphins. The interactions between humans and dolphins in their resting bays are of concern; therefore, my third chapter aimed to assess the acoustic response of the dolphins to human activity. Using days where acoustic recordings overlapped with visual surveys I found the greatest response in a bay with dolphin-centric activities, not in the bay with the most vessel activity, indicating that it is not the magnitude that elicits a response but the focus of the activity. In my fourth chapter I summarize the key results from my first three chapters to illustrate the power of multiple site design to prioritize action to protect Hawaiian spinner dolphins in their resting bays, a chapter I hope will be useful for managers should they take further action to protect the dolphins.</p> / Dissertation

Personality is defined as inter-individual variation of behavioral traits while maintaining intra-individual stability. The focus of this study was to observe distinct personality trait categories, establish baseline personality trait phenotypes for the juvenile population, and compare the personality phenotypes between different categories, such as sex or generation. Three personality traits were studied—sociability, curiousity, and boldness—based on the percentage of time individuals spent with conspecifics, human researchers, and their mothers, respectively. The surveyed individuals significantly varied positively and negatively from the means of each trait, and no significant difference for any trait was found between males and females, or across time periods. A moderately strong correlation was discovered between two personality traits, boldness and curiousity, suggesting a personality syndrome. The second primary goal was to use the aforementioned baseline to determine if personality traits can be used to predict neophilic behavior specific to human-dolphin communication research. Six of the study subjects were more prone than their peers to engage with the two-way work, and these individuals were more bold—spent less time with their mothers—than the other subjects. This suggests that boldness has some predictive capabilities towards this type of neophilia. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2016. / FAU Electronic Theses and Dissertations Collection

Duas espécies de cetáceos apresentam padrões de distribuição peculiares ao longo da costa brasileira, muito provavelmente em resposta às condições hidrográficas e topográficas que ocorrem entre 20 e 33°S. A primeira espécie, a franciscana ou toninha (Pontoporia blainvillei), é um golfinho de distribuição restrita do Brasil até a Argentina, que ocorre primariamente na plataforma continental interna, raramente ultrapassando os 50 m de profundidade. Já a segunda espécie, o golfinho-pintado-do-Atlântico (Stenella frontalis), é um golfinho de distribuição restrita ao Oceano Atlântico, que ocupa principalmente a plataforma continental. Estas duas espécies apresentam hiatos ao longo da sua distribuição no Brasil que tem consequências na morfologia e estrutura genética das espécies. Através da aplicação de diferentes métodos, o principal objetivo deste estudo foi investigar a influência do ambiente marinho no padrão de distribuição e na estrutura genética destas duas espécies com ênfase na costa brasileira. No primeiro capítulo, investigou-se a relação do ambiente marinho com o padrão de distribuição da franciscana. Para tanto, uma revisão e atualização da distribuição das áreas de manejo da franciscana (FMA), e dos limites dos hiatos, ao longo do Brasil foram realizadas. Análises de nicho ecológico sugerem que os hiatos fazem parte do nicho fundamental da franciscana que seriam, portanto, relativamente adequados para a espécie.No entanto, o estreitamento da plataforma continental parece ser o principal fator que explica a ausência da espécie nos hiatos e, inclusive poderia explicar a diferenciação genética entre algumas FMAs No segundo e terceiro capítulos, a relação entre similaridade genética e distâncias geográficas e ambientais foram investigadas para o golfinho-pintado-do- Atlântico em duas escalas: ao longo de praticamente toda distribuição e em uma escala mais restrita com ênfase no Brasil. Populações geneticamente distintas ao longo de toda distribuição da espécie foram identificadas com base em um marcador mitocondrial, que podem ser resultado Isolamento por Distância e Isolamento por Resistência, relacionados tanto com condições ambientais contemporâneas quanto do passado (Último Glacial Máximo). As análises de estrutura populacional do golfinho-pintado-do-Atlântico no Brasil, investigada mais profundamente com marcadores genômicos, indicam ao menos a existência de três populações (Brasil, Colômbia e Oceânica) suportanto, portanto, a hipótese de uma população isolada no sudeste do Brasil. De forma geral, conclui-se que o ambiente marinho e, principalmente, fatores como extensão da plataforma continental, batimetria e temperatura tem um papel fundamental para explicar o padrão de distribuição destas espécies no Brasil. Além disso, outros processos podem estar envolvidos na estruturação genética do golfinho-pintado-do-Atlântico e também da franciscana como, por exemplo, estrutura social, filopatria e a história evolutiva destas espécies. O maior desafio para conservação da franciscana é seu status de Criticamente Ameaçada no Brasil e, em relação ao golfinho-pintado-do-Atlântico é a deficiência de dados. Uma vez que ambas espécies ocorrem na porção mais desenvolvida do país, os resultados aqui obtidos têm impacto direto na conservação destas espécies, porque trazem informações que podem ser utilizadas em planos futuros de conservação e manejo. / Along Brazilian coastal waters, either franciscana and Atlantic spotted dolphins exhibited distributional gaps, which is most likely resulting from changes in the environmental features between 20 and 33°S. The former species, franciscana (Pontoporia blainvillei), is a river dolphin with restricted distribution from Brazil to Argentina, recorded mainly up to 50 m deep over the inner shelf. The second species, Atlantic spotted dolphin (Stenella frontalis), is a delphinine dolphin distributed across the Atlantic Ocean, being mainly recorded over the continental shelf. The distribution patterns that these species showed in Brazil have a direct influence on the morphology/ecology and genetic struture of both species. Different approaches were applied to address the main goal of this study, which was investigating the influence of marine environment in shaping the distribution pattern, as well as genetic strcuture of franciscana and Atlantic spotted dolphin with emphasis in the Brazilian coastal waters. In the first chapter, I investigated the franciscana distribution in Brazil using an ecological niche modeling approach. In order to do that, I performed a review of records of the species along Brazial and, updated the limits of franciscana management areas (FMAs) and distributional gaps. The results suggested that gaps are within franciscana fundamental niche and, therefore, both gaps would be suitable for franciscana. However, the narrow of continental shelf seems to be the main factor inhibiting the presence of franciscana in these areas. Furthermore, the narrowing of continental shelf play a role to explain the genetic differentiation among FMAs. In the second and third chapters, the relationship between genetic distances and geographic and environmental distances were investigated both in a restrict and a broad scale. I found genetically distinct populations 12 across Atlantic spotted dolphin distribution based on mtDNA, that are probably resulting of Isolation-by-Distance and Isolation-by-Resistance related both with contemporary and past conditions (e.g. Last Glacial Maximum). Furthermore, I investigated population struture using genomic markers (Single Nucleotide Polymorphisms, SNPs) across Western South Atlantic, Caribbean and Eastern Atlantic. The results suggested at least three different populations, and therefore, confirmed previous hypothesis of an isolated population in the southeastern Brazil. Overall, I concluded that marine envinronment, especially the extension of continental shelf, bathymetry and sea surface temperature, are the main factors that explaning the distribution pattern of franciscana and Atlantic spotted dolphin in Brazil. Besides that, other process such as, social structure and phylopatry, as well as biogeographical process might be investigated in further studies. Franciscana is considered “Critically endangered” in Brazil, and Atlantic spotted dolphin has not enough data to determine its conservation status. Since both species are recorded in the most developed region of the country with high anthropic pressure, my results could help in future management and conservation plans for both species in a regional scale.

Mass mortalities of Florida manatees (Trichechus manatus latirostris) and bottlenose dolphins (Tursiops truncatus) have been attributed to brevetoxins produced by the Florida red tide dinoflagellate Karenia brevis. The multiple routes through which marine mammals can be exposed to brevetoxins have complicated efforts to understand the mechanisms that lead to mass mortality events. In spring of 2002, 34 endangered Florida manatees died in southwest Florida, and in spring of 2004, 107 bottlenose dolphins died in the Florida Panhandle. These events provided unique opportunities to make clear connections between ingested brevetoxins and marine mammal mortalities without the confounding issues of concurrent exposure through direct contact or inhalation. Prior to 2002, the accumulation of brevetoxins on or in seagrass had never been previously reported, and the delayed or chronic exposure of manatees to brevetoxins through seagrass was not recognized as a threat. Brevetoxins were shown to persist in association with seagrass at high levels for weeks and at lower levels for months in the absence of K. brevis. Analyses of the epiphytes and detritus on the surface of the seagrass leaves as well as of the cleaned seagrass leaves and rhizomes revealed that during a K. brevis bloom as much as half of the toxin present in the seagrass may be associated with the leaves themselves, while after a bloom, the majority of the toxin present is associated with the epiphytes. The 2004 mass mortality of bottlenose dolphins in the Florida Panhandle clearly indicated that fish have the potential to vector brevetoxins to higher tropic levels. Analyses of fish collected live from St. Joseph Bay and southwest Florida revealed that brevetoxin accumulation in fish is a common occurrence. Planktivorous clupeid fish are capable of accumulating high concentrations of brevetoxins within their viscera, and their movement can result in spatial separation of a bloom and animal exposure. Sciaenid species and pinfish also accumulated brevetoxins but to a lower extent. These fish, as well as other omnivorous and piscivorous species, may retain brevetoxins in their tissues at significant concentrations after a bloom has dissipated, which may lead to temporal separation of blooms and animal exposure.

The objective of this research was to examine bottlenose dolphin (Tursiops truncatus) habitat use in the Indian River Lagoon (IRL) based on monthly relocation of photo-identified individuals, prey availability and environmental factors from 2003-2015. We focused on the variation of spatial and temporal abiotic and biotic factors and their influence on bottlenose dolphin habitat use patterns. Harbor Branch Oceanographic Institute (HBOI) conducted monthly photo-identification surveys along the length of the IRL and GPS locations of photographed dolphins were collected at the time of surveying. Stratified random samples of prey and environmental variables were collected monthly by the Florida Fish and Wildlife Conservation Commission (FWC) as part of the Fisheries-Independent Monitoring (FIM) program. Kernel density estimation was used to determine the magnitude-per-unit area of dolphins across a continuous raster surface of the IRL by wet and dry seasons each year, the values of which were used as a response variable in Classification and regression tree (CART) analyses with FIM fish community and environmental factors as predictors. Understanding how dolphins respond to environmental factors over time in the IRL could be used to predict future responses in estuaries and prioritize conservation and restoration actions. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2019. / FAU Electronic Theses and Dissertations Collection

Hector�s dolphin (Cephalorhynchus hectori) is an endangered coastal species endemic to New Zealand. Their distribution, like other marine organisms, is intertwined with the dynamics of their local habitats, and at a larger scale, the coastal waters around New Zealand. The main purpose of this thesis was to identify specific habitat requirements of this rare dolphin. Hector�s dolphin distribution around the South Island was quantified along several temporal and spatial scales. Large-scale density analyses of abundance surveys found over half of the South Island�s current population occurred within only three main regions. Two of these strongholds are along the west coast and the third is located around Banks Peninsula on the east coast. Smaller-scale analyses at Banks Peninsula found the majority of the dolphin community was preferentially using core regions within the marine mammal sanctuary. Monthly surveys showed that in summer and autumn statistically more dolphins occurred within inshore regions ([less than or equal to]one kilometre), spread throughout the surveyed coastline. From May through winter, dolphin densities rapidly declined. Remaining dolphins were significantly clumped in more offshore waters of eastern regions. The lowest encounter rates occurred between August and September. Certain 'hotspots' consistently had higher dolphin densities throughout the study period while others were preferred seasonally. To address habitat preferences, surveys simultaneously collected oceanographic samples using a CTD profiler. In general, physical variables of the Peninsula�s eastern and southeastern waters varied less, despite being regularly exposed to upwellings and the varied presence of sub-tropical waters. Semi-sheltered bays and shallow inshore waters were highly variable and more susceptible to spatially discrete influences, such as localised river outflows and exchange events. Several hydrographic features were seasonally predictable due to their dependence on climate. The stratification and location of the two dominant water masses (neritic and sub-tropical) accounted for over half of the temporal and spatial variability observed in oceanographic data. Possible relationships between oceanographic features and aggregations of dolphins within Banks Peninsula were examined using global regression and a spatial technique known as geographical weighted regression (GWR). GWR models out-performed corresponding global models, despite differences in degrees of freedom and increased model complexity. GWR results found relationships varied over localised scales that were concealed by global methods. Monthly GWR models suggested the seasonal presence and strength of local oceanographic fronts influenced dolphin distribution. Dolphin aggregations coincided with the steepest gradients between water masses along eastern regions of the Peninsula, and strong exchange events along the edges of the study area. The continued survival of this endangered species is contingent on its protection. Long-term monitoring programmes are needed for the three main strongholds identified in this study. The occurrence of Hector�s dolphin 'hotspots' along frontal zones within Banks Peninsula also suggests alternative and increased protection strategies are needed for this sanctuary to be effective. In light of this thesis� findings and based on marine protection research, future sanctuaries need to consider why Hector�s dolphins are preferentially using particular regions and how their association with certain oceanographic features can help make informed decisions on more appropriate protected areas.