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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
41

Transforming Growth Factor-Beta (TGFΒ)-Mediated Post-Transcriptional Regulation of Epithelial-Mesenchymal Transdifferentiation (EMT)

Chaudhury, Arindam 06 April 2010 (has links)
No description available.
42

Elucidation of Thermodynamic Parameters for a Host Cell Protein Acting on a HIV-1 Splicing Regulatory Element

Dewan, Nitika 12 December 2011 (has links)
No description available.
43

Development and Application of High Throughput Methods for Interrogating RNA Binding Specificity

Lin, Hsuan-Chun 08 February 2017 (has links)
No description available.
44

CHARACTERIZATION OF THE HUMAN T-CELL LEUKEMIA VIRUS TYPE-2 P28 ACCESSORY PROTEIN

Doueiri, Rami 27 August 2012 (has links)
No description available.
45

La conséquence de l’expression de hnRNP A1B sur la réponse cellulaire au stress

Rolland, Sophie 08 1900 (has links)
No description available.
46

Influence de TDP-43 sur la régulation de hnRNP A1 : un impact potentiel sur la sclérose latérale amyotrophique

Stabile, Stéphanie 12 1900 (has links)
La SLA est une maladie neurodégénérative fatale se déclenchant tardivement. Elle est caractérisée par la perte des neurones moteurs supérieurs et inférieurs. Jusqu’à présent, aucun traitement ne permet de ralentir ou de guérir la maladie de façon robuste. De récentes découvertes portant sur TDP-43 et hnRNP A1 y ont identifié des mutations reliées à des cas de SLA. Comme les deux possèdent de multiples fonctions dans le métabolisme de l’ARN, l’impact de ces mutations devient difficile à définir. Notre hypothèse est que TDP-43 régule hnRNP A1 et que les mutations causant la SLA dérégulent ce mécanisme, aboutissant ainsi à un impact majeur sur la vulnérabilité des neurones moteurs. Nos résultats démontrent que TDP-43 lie l’ARNm de hnRNP A1, mais n’affecte pas sa stabilité. En revanche, TDP-43 réprime l’expression de hnRNP A1. Ce mécanisme pourrait être appliqué in vivo où le ratio protéique hnRNP A1B/A1 augmente chez les souris âgées et davantage chez les TDP-43A315T dans la région cervicale et lombaire de la moelle épinière. Cette différence n’est pas causée par un défaut de l’épissage alternatif. Aussi, la mutation TDP-43A315T serait davantage responsable de cette différence que la surexpression de TDP-43 (résultats obtenus en culture). L’impact d’une telle augmentation sur la cellule pourrait être la formation d’agrégats puisque la forme hnRNP A1B possède quatre domaines de fibrillation de plus que hnRNP A1. Nos résultats pourraient donc fournir un mécanisme potentiel de la formation d’inclusions cytoplasmiques reconnues comme étant une des caractéristiques pathologiques principales de la SLA. / ALS is a fatal and late onset disease characterized by the selective loss of lower and upper motor neurons. Yet, there is no way to robustly slow or cure the disease. Recent discoveries concern TDP-43 and hnRNP A1 where mutations have been identified in ALS cases. Both have multiple functions in RNA metabolism, making the impact of mutations difficult to define. Our hypothesis is that TDP-43 regulates hnRNP A1 and that the ALS causative mutations deregulate this mechanism, having a major impact on the vulnerability of motor neurons. Our results demonstrate that TDP-43 binds hnRNP A1 mRNA, but does not affect its stability. In contrast, TDP-43 represses the expression of hnRNP A1. This mechanism could be applied in vivo where hnRNP A1B/A1 protein ratio increases in aged mice and even more in TDP-43A315T mice in the cervical and lumbar region of the spinal cord. This difference is not caused by a defect in alternative splicing. Also, the TDP-43A315T mutation would be more responsible for this difference than the overexpression of TDP-43 (result from cell culture). The impact of that increased on the cell could be the formation of aggregates since the shape of hnRNP A1B has four more areas of fibrillation than hnRNP A1. Our findings could thus provide a potential mechanism for the formation of cytoplasmic inclusions recognized as one of the main pathological features of ALS.
47

HnRNP E1 Protects Chromosomal Stability Through Post-Transcriptional Regulation of Cdc27 Expression

Schwartz, Laura Link 30 November 2015 (has links)
No description available.
48

TAR DNA-Binding protein 43 (TDP-43) regulates stress granule dynamics via differential regulation of G3BP and TIA-1

McDonald, Karli K. 11 1900 (has links)
TDP-43 est une protéine multifonctionnelle possédant des rôles dans la transcription, l'épissage des pré-ARNm, la stabilité et le transport des ARNm. TDP-43 interagit avec d'autres hnRNP, incluant hnRNP A2, via son extrémité C-terminale. Plusieurs membres de la famille des hnRNP étant impliqués dans la réponse au stress cellulaire, alors nous avons émis l’hypothèse que TDP-43 pouvait y participer aussi. Nos résultats démontrent que TDP-43 et hnRNP A2 sont localisés au niveau des granules de stress, à la suite d’un stress oxydatif, d’un choc thermique, et lors de l’exposition à la thapsigargine. TDP-43 contribue à la fois à l'assemblage et au maintien des granules de stress en réponse au stress oxydatif. TDP-43 régule aussi de façon différentielle les composants clés des granules de stress, notamment TIA-1 et G3BP. L'agrégation contrôlée de TIA-1 est perturbée en l'absence de TDP-43. En outre, TDP-43 régule le niveau d`ARNm de G3BP, un facteur de granule de stress de nucléation. La mutation associée à la sclérose latérale amyotrophique, TDP-43R361S, compromet la formation de granules de stress. Ainsi, la fonction cellulaire de TDP-43 s'étend au-delà de l’épissage; TDP-43 est aussi un composant de la réponse cellulaire au stress central et un acteur actif dans le stockage des ARNs. / TDP-43 is a multifunctional protein with roles in transcription, pre-mRNA splicing, mRNA stability and transport. TDP-43 interacts with other hnRNPs, including hnRNP A2, via its C-terminus and several hnRNP family members are involved in the cellular stress response. This relationship led us to investigate the role of TDP-43 in cellular stress. Our results demonstrate that TDP-43 and hnRNP A2 are localized to stress granules, following oxidative stress, heat shock, and exposure to thapsigargin. TDP-43 contributes to both the assembly and maintenance of stress granules in response to oxidative stress and differentially regulates key stress granules components including TIA-1 and G3BP. The controlled aggregation of TIA-1 is disrupted in the absence of TDP-43. In addition, TDP-43 regulates G3BP mRNA levels, a stress granule nucleating factor. A mutation associated with amyotrophic lateral sclerosis, TDP-43R361S, compromises stress granule formation. Thus, the cellular function of TDP-43 extends beyond splicing and places TDP-43 as a participant of the central cellular response to stress and an active player in RNA storage.
49

The Multifunctional HnRNP A1 Protein in the Regulation of the <i>Cyp2a5</i> Gene : Connecting Transcriptional and Posttranscriptional Processes

Glisovic, Tina January 2003 (has links)
<p>The mouse xenobiotic-inducible <i>Cyp2a5</i> gene is both transcriptionally and posttranscriptionally regulated. One of the most potent <i>Cyp2a5</i> inducers, the hepatotoxin pyrazole, increases the CYP2A5 mRNA half-life. The induction is accomplished through the interaction of a pyrazole-inducible protein with a 71 nt long, putative hairpin-loop region in the 3' UTR of the CYP2A5 mRNA.</p><p>The aims of this thesis have been to identify the pyrazole-inducible protein, to investigate its role in the <i>Cyp2a5</i> expression and the significance of the 71 nt hairpin-loop region for the <i>Cyp2a5</i> expression, and to examine a possible coupling between transcriptional and posttranscriptional processes in <i>Cyp2a5</i> expression.</p><p>The pyrazole-inducible protein was identified as the heterogeneous nuclear ribonucleoprotein (hnRNP) A1. Studies performed in mouse primary hepatocytes overexpressing hnRNP A1, and in mouse erythroleukemia derived cells lacking hnRNP A1, revealed that the 71 nt region in the 3' UTR of the CYP2A5 mRNA is essential for <i>Cyp2a5</i> expression.</p><p>The hnRNP A1 is a multifunctional nucleocytoplasmic shuttling protein, with the ability to bind both RNA and DNA. These properties make it an interesting candidate mediating a coupling between nuclear and cytoplasmic gene regulatory events, which was investigated for the <i>Cyp2a5</i>. In conditions of cellular stress hnRNP A1 translocates from the nucleus to the cytoplasm. The accumulation of cytoplasmic hnRNP A1 after RNA polymerase II transcription inhibition, resulted in an increased binding of hnRNP A1 to the CYP2A5 mRNA, parallel with a stabilization of the CYP2A5 mRNA.</p><p>Treating primary mouse hepatocytes with phenobarbital (PB), a <i>Cyp2a5</i> transcriptional inducer, resulted in a mainly nuclear localization of the hnRNP A1. Electrophoretic mobility shift assays with nuclear extracts from control or PB-treated mice, revealed that hnRNP A1 interacts with two regions in the <i>Cyp2a5</i> proximal promoter, and that the interaction to one of the regions was stimulated by PB treatment.</p><p>In conclusion, the change in hnRNP A1 subcellular localization after transcriptional inhibition or activation, together with the effects on the interaction of hnRNP A1 with the CYP2A5 mRNA and <i>Cyp2a5</i> promoter, suggest that hnRNP A1 could couple the nuclear and cytoplasmic events of the <i>Cyp2a5</i> expression.</p><p>The presented studies are the first showing involvement of an hnRNP protein in the regulation of a <i>Cyp</i> gene. Moreover, it is the first time an interconnected transcriptional and posttranscriptional regulation has been suggested for a member of the <i>Cyp</i> gene family.</p>
50

The Role of Polyadenylation in Human Papillomavirus Type 16 Late Gene Expression

Öberg, Daniel January 2005 (has links)
<p>High-risk type human papillomaviruses (HPVs) are associated with cancer. HPVs are strictly epitheliotropic and infect basal cell layers, establishing a life cycle strongly linked to the differentiation stage of the infected cells. The viral capsid late genes, L2 and L1, are only expressed in terminally differentiated epithelium. Late gene expression involves regulation of most gene processing events including transcription, splicing, polyadenylation, mRNA stability and translation. </p><p>Both L2 and L1 have elements present in the open reading frames (ORFs) negatively affecting mRNA levels and translation. The negative elements in L1 were mapped to the first 514 nucleotides, with the strongest inhibitory effect located in the first 129 nucleotides. The negative elements in the L2 sequence were concentrated in two locations on the gene. Both genes were mutated by changing the nucleotide sequence while retaining the amino acid sequence. Mutating the first 514 nucleotides in L1 deactivated the negative elements while the entire L2 gene had to be mutated to achieve the same result. The L2 protein was found to localise the L1 protein into a punctuated pattern in the nucleus.</p><p>In the HPV-16 genome the negative elements reside in regions important for regulation of polyadenylation and splicing, critical for late gene expression. By exchanging parts of the L2 gene in subgenomic constructs with the corresponding mutant sequence we show that certain features of the L2 elements direct splicing to the L1 splice acceptor, and also regulate the efficiency of the early polyadenylation site. Cumulative binding of hnRNP H to the L2 mRNA gradually increased polyadenylation efficiency. Most interestingly, hnRNP H levels were downregulated in more differentiated epithelial cells. </p><p>Elucidation of how expression of the immunogenic late proteins is regulated would be greatly beneficial in prevention and treatment of HPV infection and thereby cancer.</p>

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