Includes bibliographical references (leaves 153-157). Petrographic image analysis proved particularly useful in determining the parameters for statistical analysis for the simple mineralogies displayed in the samples from the Hutton Sandstone. Concentrates on establishing techniques for statistical study of data collected by PIA to subdivide the framework grains from the porosity or cement.

This thesis is aimed to calculate the effective permeability tensor and to simulate the fluid flow in naturally fractured reservoirs. This requires an understanding of the mechanisms of fluid flow in naturally fractured reservoirs and the detailed properties of individual fractures and matrix porous media. This study has been carried out to address the issues and difficulties faced by previous methods; to establish possible answers to minimise the difficulties; and hence, to improve the efficiency of reservoir simulation through the use of properties of individual fractures. The methodology used in this study combines several mathematical and numerical techniques like the boundary element method, periodic boundary conditions, and the control volume mixed finite element method. This study has contributed to knowledge in the calculation of the effective permeability and simulation of fluid flow in naturally fractured reservoirs through the development of two algorithms. The first algorithm calculates the effective permeability tensor by use of properties of arbitrary oriented fractures (location, size and orientation). It includes all multi-scaled fractures and considers the appropriate method of analysis for each type of fracture (short, medium and long). In this study a characterisation module which provides the detail information for individual fractures is incorporated. The effective permeability algorithm accounts for fluid flows in the matrix, between the matrix and the fracture and disconnected fractures on effective permeability. It also accounts for the properties of individual fractures in calculation of the effective permeability tensor. The second algorithm simulates flow of single-phase fluid in naturally fractured reservoirs by use of the effective permeability tensor. This algorithm takes full advantage of the control volume discretisation technique and the mixed finite element method in calculation of pressure and fluid flow velocity in each grid block. It accounts for the continuity of flux between the neighbouring blocks and has the advantage of calculation of fluid velocity and pressure, directly from a system of first order equations (Darcy???s law and conservation of mass???s law). The application of the effective permeability tensor in the second algorithm allows us the simulation of fluid flow in naturally fractured reservoirs with large number of multi-scale fractures. The fluid pressure and velocity distributions obtained from this study are important and can considered for further studies in hydraulic fracturing and production optimization of NFRs.

The effect of temperature on soil behaviour has been the subject of many studies in recent years due to an increasing number of projects related to the application of high temperature to soil. One example is the construction of facilities for the disposal of hot high level nuclear waste canisters (150-200C) several hundred meters underground in the clay formations. Despite this, the effects and mechanism by which temperature affects the soil properties and behaviour are not fully known. A limited amount of reliable experimental data, technological difficulties and experimental methods employed by different researchers could have contributed to the uncertainties surrounding the soil behaviour at elevated temperature. Also several thermo-mechanical models have been developed for soil behaviour, but their validity needs to be examined by reliable experimental data. In this research, efforts have been made to improve the experimental techniques. Direct displacement measuring devices have been successfully used for the first time to measure axial and lateral displacements of clay samples during tests at various temperatures. The thermo mechanical behaviour of two reconstituted clays has been investigated by performing triaxial and permeability tests at elevated temperature. Undrained and drained triaxial tests were carried out on normally consolidated and over consolidated samples of M44 clay and Kaolin C1C under different effective stresses, and at temperatures between 22C and 100C. Permeability tests were carried out on samples of M44 clay at temperatures between 22C and 50C. The effects of temperature on permeability, volume change, pore pressure development, shear strength and stiffness, stress strain response and critical state parameters for different consolidation histories have been investigated by comparing the results at various temperatures. The results are also compared with the predictions of two models. It has been found that at elevated temperature the shear strength, friction angle and initial small strain stiffness reduce whereas permeability increases. The slope of the swelling line in the v-p� plane has been found to reduce with temperature. The slope of the isotropic normal consolidation line (INCL) and critical state line (CSL) in the v-p� plane have been observed to be independent of temperature, but both the INCL and the CSL shift downwards to lower locations as temperature increases. The deformations during drained cooling and re heating cycles have been found to be elastic and to simply reflect the expansivity of the soils solid particles. The thermal volume changes during undrained heating have been observed to be direct results of the thermal expansion of water and clay particles. The internal displacement measuring devices have been found to produce reliable data for the variation of strains at elevated temperature.

Doctor of Philosophy (Medicine) / Background: Diabetic vascular complications affect both the macro- and microvasculature. Microvascular pathology in diabetes may be mediated by biochemical factors that precipitate cellular changes at both the gene and protein levels. In the diabetic retina, vascular pathology is found mainly in microvessels, including the retinal precapillary arterioles, capillaries and venules. Macular oedema secondary to breakdown of the inner blood-retinal barrier is the most common cause of vision impairment in diabetic retinopathy. Müller cells play a critical role in the trophic support of retinal neurons and blood vessels. In chronic diabetes, Müller cells are increasingly unable to maintain their supportive functions and may themselves undergo changes that exacerbate the retinal pathology. The consequences of early diabetic changes in retinal cells are primarily considered in this thesis. Aims: This thesis aims to investigate the effect of perivascular cells (Müller cells, RPE, pericytes) on retinal endothelial cell permeability using an established in vitro model. Methods: Immunohistochemistry, cell morphology and cell growth patterns were used to characterise primary bovine retinal cells (Müller cells, RPE, pericytes and endothelial cells). An in vitro model of the blood-retinal barrier was refined by coculturing retinal endothelial cells with perivascular cells (Müller cells or pericytes) on opposite sides of a permeable Transwell filter. The integrity of the barrier formed by endothelial cells was assessed by transendothelial electrical resistance (TEER) measurements. Functional characteristics of endothelial cells were compared with ultrastructural morphology to determine if different cell types have barrier-enhancing effects on endothelial cell cultures. Once the co-culture model was established, retinal endothelial cells and Müller cells were exposed to different environmental conditions (20% oxygen, normoxia; 1% oxygen, hypoxia) to examine the effect of perivascular cells on endothelial cell permeability under reduced oxygen conditions. Barrier integrity was assessed by TEER measurements and permeability was measured by passive diffusion of radiolabelled tracers from the luminal to the abluminal side of the endothelial cell barrier. A further study investigated the mechanism of laser therapy on re-establishment of retinal endothelial cell barrier integrity. Müller cells and RPE, that comprise the scar formed after laser photocoagulation, and control cells (Müller cells and pericytes, RPE cells and ECV304, an epithelial cell line) were grown in long-term culture and treated with blue-green argon laser. Lasered cells were placed underneath confluent retinal endothelial cells growing on a permeable filter, providing conditioned medium to the basal surface of endothelial cells. The effect of conditioned medium on endothelial cell permeability was determined, as above. Results: Co-cultures of retinal endothelial cells and Müller cells on opposite sides of a permeable filter showed that Müller cells can enhance the integrity of the endothelial cell barrier, most likely through soluble factors. Low basal resistances generated by endothelial cells from different retinal isolations may be the result of erratic growth characteristics (determined by ultrastructural studies) or the selection of vessel fragments without true ‘barrier characteristics’ in the isolation step. When Müller cells were co-cultured in close apposition to endothelial cells under normoxic conditions, the barrier integrity was enhanced and permeability was reduced. Under hypoxic conditions, Müller cells had a detrimental effect on the integrity of the endothelial cell barrier and permeability was increased in closely apposed cells. Conditioned medium from long-term cultured Müller cells and RPE that typically comprise the scar formed after lasering, enhanced TEER and reduced permeability of cultured endothelial cells. Conclusions: These studies confirm that bovine tissues can be used as a suitable model to investigate the role of perivascular cells on the permeability of retinal endothelial cells. The dual effect of Müller cells on the retinal endothelial cell barrier under different environmental conditions, underscores the critical role of Müller cells in regulating the blood-retinal barrier in health and disease. These studies also raise the possibility that soluble factor(s) secreted by Müller cells and RPE subsequent to laser treatment reduce the permeability of retinal vascular endothelium. Future studies to identify these factor(s) may have implications for the clinical treatment of macular oedema secondary to diseases including diabetic retinopathy.

Includes bibliographical references. The beneficial effects of tillage are often negated in Australian soils by poor aggregate structural stability. If irrigation or rain falls on exposed freshly tilled soil, crusting or harsetting often develops on drying. Rainfall intensity, kinetic energy, rate of wetting, antecedent water content and soil management history have been implicated in aggregate breakdown.

<p>After drinking water, the fluid quickly leaves the stomach thereby creating a hypotonic luminal environment in the duodenum. This in turn constitutes a potential threat to the integrity of the duodenal epithelium. It therefore seems highly likely that luminal hypotonicity activates physiological mechanisms that aim to increase luminal osmolality. One such physiological mechanism may be to increase mucosal permeability thereby facilitating the transport of osmolytes into the lumen.</p><p>A draw-back of performing experiments in anesthetized animals is that surgery <i>per se</i> depresses gut functions, such as peristalsis, by mechanisms involving endogenous prostaglandins. In this thesis it is shown that inhibition of cyclooxygenase-2 (COX-2), in animals subjected to an abdominal operation, restore and/or improve duodenal functions such as motility, mucosal bicarbonate secretion, hypotonicity-induced increase in mucosal permeability and the osmolality-adjusting capability.</p><p>Experiments revealed that the stomach is resistant to hypotonic challenge while the jejunum is more sensitive to hypotonicity-induced increase in mucosal permeability than the duodenum. The hypotonicity-induced increase in duodenal mucosal permeability is not due to injury but possibly reflects physiological dilatation of paracellular shunts.</p><p>Luminal perfusion of the duodenum with an isotonic solution lacking Cl^- decreased bicarbonate secretion while the lack of luminal Na⁺ increased mucosal permeability. Stimulation of bicarbonate secretion by COX-2 inhibition is to a large extent dependent on luminal Cl^- while that induced by vasoactive intestinal peptide is not.</p><p>The hypotonicity-induced increase in mucosal permeability involves the release and action of serotonin (5-HT) on 5-HT₃ and 5-HT₄ receptors and stimulation of enteric nerves strongly implicating physiological regulation of this process.</p>

Coalbeds are an extremely complicated porous medium with characteristics of heterogeneity, dual porosity and stress sensitivity. In the past decades great achievements have been made to the simulation models of pressure depletion coalbed methane (CBM) recovery process and CO2 sequestration and enhanced coalbed methane (ECBM) recovery process. However, some important mechanisms are still not or not properly included. Among them, the influence of geomechanics is probably the most important one. Because of its influence coalbed permeability, the key parameter for the success of recovery processes, changes drastically with alterations of in situ stresses and strains during these processes. In present reservoir simulators, the change of coalbed permeability is estimated with analytical models. Due to the assumptions and over simplifications analytical models have limitations or problems in application. In this research to properly estimate the changes of permeability and porosity in the simulation of CO2 sequestration and ECBM recovery process, comprehensive permeability and porosity models have been developed with minimum assumptions and simulation methods established. Firstly, a set of continuum medium porosity and permeability coupling models is built up and a simulation procedure to apply these models in reservoir and geomechanical coupled simulations proposed. Using the models and simulation procedure a sensitivity study, mainly on the parameters related to coalbed permeability change and deformation, has been made for the CBM recovery process. Then based on the understanding, a set of discontinuum medium porosity and permeability coupling models is developed and a procedure to apply these models in reservoir and geomechanical coupled simulations presented. The new models are more comprehensive and adaptable, and can accommodate a wide range of coalbeds and in situ conditions. The proposed equivalent continuum deformation model for coal mass is validated by simulating a set of lab tests including a uniaxial compression test in vacuum and a CO2 swelling test under axial constraint in the longitudinal (vertical) direction. At last the discontinuum medium porosity and permeability coupling models and the simulation procedure are successfully applied to simulate part of a series of micro-pilot tests of ECBM and CO2 sequestration at Fenn Big Valley of Alberta, Canada. / Geotechnical Eengineering

After drinking water, the fluid quickly leaves the stomach thereby creating a hypotonic luminal environment in the duodenum. This in turn constitutes a potential threat to the integrity of the duodenal epithelium. It therefore seems highly likely that luminal hypotonicity activates physiological mechanisms that aim to increase luminal osmolality. One such physiological mechanism may be to increase mucosal permeability thereby facilitating the transport of osmolytes into the lumen. A draw-back of performing experiments in anesthetized animals is that surgery per se depresses gut functions, such as peristalsis, by mechanisms involving endogenous prostaglandins. In this thesis it is shown that inhibition of cyclooxygenase-2 (COX-2), in animals subjected to an abdominal operation, restore and/or improve duodenal functions such as motility, mucosal bicarbonate secretion, hypotonicity-induced increase in mucosal permeability and the osmolality-adjusting capability. Experiments revealed that the stomach is resistant to hypotonic challenge while the jejunum is more sensitive to hypotonicity-induced increase in mucosal permeability than the duodenum. The hypotonicity-induced increase in duodenal mucosal permeability is not due to injury but possibly reflects physiological dilatation of paracellular shunts. Luminal perfusion of the duodenum with an isotonic solution lacking Cl- decreased bicarbonate secretion while the lack of luminal Na+ increased mucosal permeability. Stimulation of bicarbonate secretion by COX-2 inhibition is to a large extent dependent on luminal Cl- while that induced by vasoactive intestinal peptide is not. The hypotonicity-induced increase in mucosal permeability involves the release and action of serotonin (5-HT) on 5-HT3 and 5-HT4 receptors and stimulation of enteric nerves strongly implicating physiological regulation of this process.

Characterization of semi-permeable films promotes the systematic selection of membranes and process design. When acquiring the diffusive and sorption properties of gas transport in non-porous membranes, the time lag method is considered the conventional method of characterization. The time lag method involves monitoring the transient accumulation of species due to permeation on a fixed volume present in a downstream reservoir. In the thesis at hand, an alternative approach to the time lag technique is proposed, termed as the short cut method. The short cut method appoints the use of a two reservoir system, where the species decay in the upstream face of the membrane is monitored, in combination with the accumulation on the downstream end. The early and short time determination of membrane properties is done by monitoring the inflow and outflow flux profiles, including their respective analytical formulas. The newly proposed method was revealed to have estimated the properties at 1/10 the required time it takes for the classical time lag method, which also includes a better abidance to the required boundary conditions. A novel design of the upstream reservoir, consisting of a reference and working volume, is revealed, which includes instructional use, and the mechanics involved with its operation. Transient pressure decay profiles are successfully obtained when the reference and working volumes consisted of only tubing. However when tanks were included in the volumes, large errors in the decay were observed, in particular due to a non-instantaneous equilibration of the pressure during the start up. This hypothesis was further re-enforced by examining different upstream tank-based configurations. iii In the end, a validated numerical model was constructed for the purpose of simulating the two reservoir gas permeation system. A modified form of the finite differences scheme is utilized, in order to account for a concentration-dependent diffusivity of penetrants within the membrane. Permeation behavior in a composite membrane system was disclosed, which provided a new perspective in analyzing the errors associated with the practical aspect of the system.

Many geoenvironmental applications make use of granular drainage layers. Design guidelines for these drains recommend a granular soil that provides for filtration of the adjacent base soil. Filtration criteria have been developed through laboratory studies in which fine soils under a concentrated gradient of water are protected from erosion by a filter soil. The primary objective in these studies has been the geotechnical stability of earth-fill structures, while drainage was a secondary consideration. Granular drainage layers have therefore been constructed using fine sand. The subsequent migration of fine soil into these drains has resulted in significant loss in permeability. The main research objective was to develop design criteria for granular drains to be used for long term operation in environmental applications. The secondary objective was to investigate the relationships between grain size distribution of drain materials and clogging by fines. This was done through a laboratory study where changes in permeability were measured in granular soils infiltrated with fines. Lastly, the effect of salinity on fines deposition was also investigated. The hypothesis of the current study is that coarser granular drains minimize the impact of clogging and provides a better alternative to traditional drain designs for long term environmental applications. The laboratory study was performed with three granular drainage soils: a French Drain sand designed using the traditional filter design method, a coarser uniform sand, and a coarser graded sand with approximately 40% gravel sized particles. Three fine soils were used to infiltrate the drainage soils; however, their particle size distributions were not significantly different from one another. The results indicate that the permeability of all three drainage soils could be reduced by approximately one order of magnitude with continuous flow of a high concentration of fines (5 g/L). The permeabilities of the sands were reduced to a lesser extent with a lower concentration of fines. Permeabilities of the graded soils decreased more slowly with a lower concentration of fines, when considering pore volumes of flow. However, the rate of permeability decrease was ultimately influenced by the amount of fines delivered to the sample. A lower concentration of fines did not significantly slow the rate of permeability reduction in the uniform sand. All three sands retained a similar mass of fines (samples were split and fines content measured following each test). Salinity in the pore water did not significantly affect deposition, likely due to the fact that the fines contained a small amount of clay sized particles. When considering that all three drainage soils became clogged with fines during the tests, the coarse soils maintained a relatively high permeability due to the fact that their pre-test permeabilities were high. This information, along with the results from the literature review, has led to the development of recommended new design criteria for granular drains to be used for long-term geoenvironmental applications. Test results from an earlier study found that dispersive soils subject to high gradients can be successfully protected by a filter coarser than the coarse graded soil used in the current study. It therefore follows that a granular soil intended for groundwater collection applications can be made to be coarser than the current accepted practice. A proposed granular drain design band is presented in the current study.