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Etude des bases moléculaires du déterminisme sexuel et de la différenciation chez une espèce hétérogamétique femelle ZZ-ZW : Schistosoma mansoni / Molecular basis of sex determination and differentiation of a female heterogametic species ZZ/ZW : Schistosoma mansoniPicard, Marion 01 December 2015 (has links)
Parmi plus de 20000 espèces de trématodes hermaphrodites, les Schistosomatidae ont un statut particulier car ils sont gonochoriques (i.e. deux sexes séparés). Le gonochorisme chez ces espèces, et leur dimorphisme sexuel, seraient en fait une stratégie d’adaptation à leur habitat : le système veineux des vertébrés à sang chaud, dont l’Homme. Malgré un mode chromosomique de déterminisme du sexe (i.e. hétérogamétie femelle ZW), les individus mâles et femelles demeurent phénotypiquement identiques durant tous les stades larvaires de leur cycle de vie hétéroxène. La différenciation sexuelle n’a lieu qu’après l’infestation de leur hôte définitif. Dans ce travail, nous nous sommes intéressés aux facteurs moléculaires déclenchant cette différenciation chez Schistosoma mansoni. Nous avons établi le profil d’expression sexe-dépendant de gènes conservés de la cascade de détermination/différenciation chez les animaux : les DMRT (Double-sex and Male-abnormal-3 Related Transcription Factors). Nous avons par ailleurs généré un transcriptome comparatif mâle/femelle (RNA-seq) sur 5 stades de développement in vivo, dont 3 stades « schistosomules » inédits. Cela nous a permis d’identifier de potentiels gènes « clés » de la différenciation sexuelle et de souligner l’importance de l’interaction hôte-parasite. Enfin, par la combinaison de cette approche transcriptomique et d’une analyse épigénomique (ChIP-seq), nous avons montré une dynamique de la compensation de dose génique au cours du cycle de vie chez les femelles ainsi que la mise en place d’une stratégie transcriptionnelle particulière chez les mâles, optimisant leur développement dans l’hôte et ainsi, leur succès reproducteur. / Parasitic flatworms include more than 20.000 species that are mainly hermaphrodites. Among them, the hundred species of Schistosomatidae are intriguing because they are gonochoric. The acquisition of gonochorism in these species is supposed to provide genetic and functional advantages to adapt to their hosts: warm-blooded animals. Sex of schistosomes is genetically determined at the time of fertilization (i.e. ZW female heterogametic system). However, there is no phenotypic dimorphism through all the larval stages of its complex lifecycle: sexual dimorphism appears only in the definitive host. The molecular mechanisms triggering this late sexual differentiation remain unclear, and this is precisely the topic of our present work. We performed transcriptomic (RNA-Sequencing and quantitative-PCRs) and structural (ChIP-Sequencing) analyses at different stages of Schistosoma mansoni development. Here, we present data suggesting that the sexual differentiation relies on a combination of genetic and epigenetic factors. In a genetic point of view, we show a sex-associated expression of the DMRT genes (Double-sex and Mab-3 Related Transcription Factors) that are known to be involved in sex determination/differentiation through all the animal kingdom. In addition, we propose new potential sex-determining key genes and a pivotal role of host-pathogen interaction at the time of development. In a structural point of view, we highlight a dynamic status of dosage compensation in females and chromatin modifications in males. This intense remodeling reveals a specific transcriptomic strategy which optimizes male development and beyond that, schistosomes reproductive success.
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DYRK1A-RELATED TRABECULAR DEFECTS IN MALE TS65DN MICE EMERGE DURING A CRITICAL DEVELOPMENTAL WINDOWJonathan Mark LaCombe (11022450) 06 August 2021 (has links)
<p> Down syndrome (DS) is a complex genetic disorder caused by
the triplication of human chromosome 21 (Hsa21). The presence of an extra copy
of an entire chromosome greatly disrupts the copy number and expression of over
350 protein coding genes. This gene dosage imbalance has far-reaching effects on
normal development and aging, leading to cognitive and skeletal defects that
emerge earlier in life than the general population.</p>
<p> The present
study begins by characterizing skeletal development in young male Ts65Dn mice to
test the hypothesis that skeletal defects in male Ts65Dn mice are developmental
in nature.Femurs from young mice ranging from postnatal day 12- to 42-days of
age (P12-42) were measured and analyzed by microcomputed tomography (μCT). Cortical
defects were present generally throughout development, but trabecular defects emerged
at P30 and persisted until P42. </p>
<p> The gene <i>Dual-specificity
tyrosine-regulated kinase 1a </i>(<i>Dyrk1a</i>) is triplicated in both
DS and in Ts65Dn mice and has been implicated as a putative cause of both
cognitive and skeletal defects. To test the hypothesis that trisomic <i>Dyrk1a</i>
is related to the emergence of trabecular defects at P30, expression of <i>Dyrk1a</i>
in the femurs of male Ts65Dn mice was quantified by qPCR. Expression was shown
to fluctuate throughout development and overexpression generally aligned with
the emergence of trabecular defects at P30.</p>
<p> The growth
rate in trabecular measures between male Ts65Dn and euploid littermates was
similar between P30 and P42, suggesting a closer look into cellular mechanisms
at P42. Assessment of proliferation of BMSCs, differentiation and activity of
osteoblasts showed no significant differences between Ts65Dn and euploid
cellular activity, suggesting that the cellular microenvironment has a greater
influence on cellular activity than genetic background.</p>
These
data led to the hypothesis that reduction of <i>Dyrk1a</i> gene expression and
pharmacological inhibition of DYRK1A could be executed during a critical period
to prevent the emergence of trabecular defects at P30. To tests this hypothesis,
doxycycline-induced cre-lox recombination to reduce <i>Dyrk1a</i> gene copy
number or the DYRK1A inhibitor CX-4945 began at P21. The results of both
genetic and pharmacological interventions suggest that trisomic <i>Dyrk1a</i>
does not influence the emergence of trabecular defects up to P30. Instead, data
suggest that the critical window for the rescue of trabecular defects lies
between P30 and P42.
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3D CBCT analysis of the frontal sinus and its relationship to forensic identificationKrus, Bianaca S. January 2014 (has links)
Indiana University-Purdue University Indianapolis (IUPUI) / The positive identification of human remains that are decomposed, burnt, or otherwise disfigured can prove especially challenging in forensic anthropology, resulting in the need for specialized methods of analysis. Due to the unique morphological characteristics of the frontal sinus, a positive identification can be made in cases of unknown human remains, even when remains are highly cremated or decomposed. This study retrospectively reviews 3D CBCT images of a total of 43 Caucasian patients between the ages of 20-38 from the Indiana University School of Dentistry to quantify frontal sinus differences between adult males and females and investigate the usefulness of frontal sinus morphology for forensic identification. Digit codes with six sections and eleven-digit numbers were created to classify each individual sinus. It was shown that 3D CBCT images of the frontal sinus could be used to make a positive forensic identification. Metric measurements displayed a high degree of variability between sinuses and no two digit codes were identical. However, it was also shown that there were almost no quantifiable and significant sexually dimorphic differences between male and female frontal sinuses. This study confirms that sex determination should not be a primary goal of frontal sinus analysis and highlights the importance of creating a standard method of frontal sinus evaluation based on metric measurements.
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Caractérisation évolutive et fonctionnelle d’une insertion dans le gène mitochondrial cox2 chez le bivalve Scrobicularia planaTassé, Mélanie 08 1900 (has links)
Des modifications dans le gène codant pour la sous-unité II du cytochrome c oxydase du génome mâle (Mcox2) ont été recensées chez des espèces de bivalves présentant un mode unique de transmission mitochondriale nommé double transmission uniparentale (DUI). Dans la DUI, les mitochondries paternelles (et leur ADNmt mâle) ainsi que les mitochondries maternelles (et leur ADNmt femelle) sont transmises aux descendants mâles. Scrobicularia plana, une espèce de bivalves présentant ce modèle d'hérédité, possède une insertion importante d'environ 4,8 kb dans son gène Mcox2 qui ne change pas le cadre de lecture et qui est traduite en un polypeptide de 1 892 acides aminés, ce qui en fait la plus grande protéine COX2 connue à ce jour chez les métazoaires. L’objectif de cette étude était de caractériser l'évolution et la fonction potentielle de l'insertion dans Mcox2 chez S. plana par RT-PCR, tests immunologiques et analyses bio-informatiques. L'insertion est présente parmi les individus de différentes populations, contient des variations dans la longueur de sa séquence, est riche en zones de désordre intrinsèque et évolue sous sélection purificatrice. La longue insertion pourrait modifier la structure 3D du complexe IV de la chaîne de transport d'électrons (CTE), affectant sa fonction dans la phosphorylation oxydative (OXPHOS) ce qui pourrait expliquer les faibles taux d'OXPHOS observés dans les mitochondries mâles des bivalves à DUI. L'insertion pourrait également modifier le métabolisme mitochondrial mâle en interagissant avec d'autres complexes de la CTE et avec l'ATP synthase. Comme pour les autres modifications de Mcox2 chez les bivalves à DUI, un rôle potentiel dans la détermination du sexe peut être prédit pour MCOX2 chez S. plana. / Modifications in the cytochrome c oxidase subunit II gene of male-transmitted genome (Mcox2) have been found in some bivalve species that exhibit a unique mode of mitochondrial transmission named doubly uniparental inheritance (DUI). In DUI, paternal mitochondria (and their male mtDNA) as well as maternal mitochondria (and their female mtDNA) are transmitted to male offspring. Scrobicularia plana, a bivalve specie exhibiting this inheritance model possesses an important in-frame insertion of approximately 4,8 kb in its Mcox2 gene that is translated into a polypeptide of 1 892 amino acids making it the largest metazoan COX2 protein known to date. The aim of this study was to characterize the evolution and possible function of the Mcox2 insertion in S. plana through RT-PCRs, immunoassays, and bioinformatic analysis. The insertion is present amongst individuals from different populations, contains some variations in its sequence length, is rich in intrinsically disordered regions and evolves under purifying selection. The long insertion could modify the 3D structure of complex IV in the electron transport chain (ETC), impacting its function in oxidative phosphorylation (OXPHOS) which could explain low OXPHOS rates that were found in male mitochondria of DUI bivalves. The insertion could also alter male mitochondrial metabolism by interacting with other complexes of the ETC and with ATP synthase. As for other modifications of Mcox2 in DUI bivalves, a role in sex determination can also be predicted for MCOX2 in S.plana.
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