A LLE-GC-MS method was developed to detect PPCPs in surface water samples from Big Cypress National Park, Everglades National Park and Biscayne National Park in South Florida. The most frequently found PPCPs were caffeine, DEET and triclosan with detected maximum concentration of 169 ng/L, 27.9 ng/L and 10.9 ng/L, respectively. The detection frequencies of hormones were less than PPCPs. Detected maximal concentrations of estrone, 17β-estradiol, coprostan-3-ol, coprostane and coprostan-3-one were 5.98 ng/L, 3.34 ng/L, 16.5 ng/L, 13.5 ng/L and 6.79 ng/L, respectively. An ASE-SPE-GC-MS method was developed and applied to the analysis of the sediment and soil area where reclaimed water was used for irrigation. Most analytes were below detection limits, even though some of analytes were detected in the reclaimed water at relatively high concentrations corroborating the fact that PPCPs do not significantly partition to mineral phases. An online SPE-HPLC-APPI-MS/MS method and an online SPE-HPLC-HESI-MS/MS method were developed to analyze reclaimed water and drinking water samples. In the reclaimed water study, reclaimed water samples were collected from the sprinkler for a year-long period at Florida International University Biscayne Bay Campus, where reclaimed water was reused for irrigation. Analysis results showed that several analytes were continuously detected in all reclaimed water samples. Coprostanol, bisphenol A and DEET’s maximum concentration exceeded 10 µg/L (ppb). The four most frequently detected compounds were diphenhydramine (100%), DEET (98%), atenolol (98%) and carbamazepine (96%). In the study of drinking water, 54 tap water samples were collected from the Miami-Dade area. The maximum concentrations of salicylic acid, ibuprofen and DEET were 521 ng/L, 301 ng/L and 290 ng/L, respectively. The three most frequently detected compounds were DEET (93%), carbamazepine (43%) and salicylic acid (37%), respectively. Because the source of drinking water in Miami-Dade County is the relatively pristine Biscayne aquifer, these findings suggest the presence of wastewater intrusions into the delivery system or the onset of direct influence of surface waters into the shallow aquifer.

Le développement des outils analytiques pour l'analyse de la matière organique complexe en géochimie organique a connu de nombreuses avancées ces dernières années. Ce développement a permis de répondre à un grand nombre de questions quant à la composition de la matière organique. Cependant, beaucoup des points restent encore à élucider comme notamment la caractérisation des fractions de hauts poids moléculaires ainsi que le suivi de la réactivité de la matière organique. Ce travail de thèse a eu pour objectif (i) d'adapter les techniques de spectrométrie de masse déjà existantes pour l'analyse de la matière organique fossile (notamment par la sélection de la source d'ionisation atmosphérique la plus adaptée) mais également (ii) de développer un nouveau type de couplage entre la chromatographie d'exclusion stérique (SEC) et la spectrométrie de masse APPI-QTOF pour l'analyse des fractions peu polaires de hauts poids moléculaires. L'adaptation du l'APPI-QTOF a tout d'abord permis de mieux comprendre la réactivité de contaminants organiques polyaromatiques en présence de phases minérales. Le couplage SEC-APPI-QTOF a, quant à lui, permis d'améliorer les connaissances sur la structure des asphaltènes. Cependant, malgré la « simplification » rendue possible par la SEC, la très grande quantité d'informations reste difficile à interpréter et prend beaucoup de temps. Un modèle mathématique a donc été développé basé sur des analyses numériques et statistiques des spectres de masse, permettant de les comparer entre eux afin de distinguer l'origine des échantillons et de suivre l'impact de processus physico-chimiques (altérations naturelles - traitements de remédiation). / The development of analytical tools for organic geochemistry analysis has increased these past years. This development has allowed answering many questions about organic matter composition. However, many issues remain to be clarified including the characterization of high molecular weight fractions and monitoring the reactivity of organic matter. This thesis has focused on both (i) existing method improvements for fossil organic geochemistry analysis but also on (ii) developing a new type of coupling between the size exclusion chromatography (SEC) and the APPI-QTOF mass spectrometry for high molecular weight weakly polar fractions. Adjustments on APPI-QTOF mass spectrometry have allowed a better understanding of polyaromatic organic contaminant reactivity in presence of mineral matrices. The success of this coupling has allowed a better understanding of the structure of asphaltenes. However despite the "simplification" obtained by the SEC, the large amount of information remains difficult to interpret and time-consuming. A mathematical model has been developed based on numerical and statistical analysis of mass spectra, allowing direct comparison of mass spectra and being able to identify several types of information such as origins of samples, monitoring of physico-chemical processes and also the efficiency of soil recovery treatments as well as the identification of analytical protocols.

Made available in DSpace on 2016-12-23T14:41:52Z (GMT). No. of bitstreams: 1 Thieres Magaive Costa Pereira.pdf: 7173330 bytes, checksum: 5a2aee56b5048351ab0fc838877f8030 (MD5) Previous issue date: 2013-08-23 / O petróleo é uma mistura complexa, sendo uma das misturas mais desafiadoras para as análises químicas. Muitas técnicas são empregadas para a caracterização dos constituintes do óleo. Entretanto, quando combinamos o altíssimo poder de resolução e exatidão da espectrometria de massas, em especial a Ressonância Ciclotrônica de Íons com Transformada de Fourier, (FT-ICR MS) com fontes de ionização a pressão atmosférica, uma atribuição precisa de mais de 20 000 compostos orgânicos do petróleo pode ser obtida. Na indústria do petróleo existe um grande interesse na análise de ácidos naftênicos e asfaltenos devido a problemas como corrosão e formação de depósitos, que aumentam os custos de produção. Portanto este trabalho tem como objetivo a avaliação da termodegradação de ácidos naftênicos, além do emprego das fontes de ESI, APCI, APPI, LDI e MALDI para aquisição de novos dados relativos a caracterização de asfaltenos. Dois petróleos foram utilizados nos ensaios de termodegradação, o petróleo A com acidez de 2,38 mg KOH g-1 e o petróleo B com 4,79 mg KOH g-1 os quais foram tratados a 280, 300 e 350 ºC pelo período de 2, 4 e 6 horas. De uma maneira geral, as principais classes identificadas para ambas às amostras foram O2, N e NO2, respectivamente. Uma leve redução do NAT e da abundância relativa referente à classe O2 foram observado em função da temperatura e do tempo de envelhecimento (T = 280 → 300 oC e t = 2 → 6 h), sendo que a temperatura de tratamento térmico a 350 ºC demonstrou-se determinante na remoção de compostos da classe O2. O perfil químico de amostras de asfaltenos brasileiros foi avaliado utilizando-se cinco diferentes métodos de ionização em ambos os modos de ionização: positivo e negativo, depois, a distribuição de peso molecular, distribuição de classe, parcelas típicas de número de carbono contra DBE e diagramas van Krevelen foram obtidos e discutidos. Um comportamento atípico foi observado para a fonte de LDI e MALDI (±) FT-ICR MS. Um amplo perfil, de m/z 500-3000, apresentando espaçamento de 24 Da foi observado, e este corresponde a formas alotrópicas de fulereno, C60. Em geral, os asfaltenos apresentaram um elevada proporção de espécies heteroatómicas como: HC, HC [H], N, N [H], N2O, N2O [H], N2, N2 [H], O, O[H] para o modo (+) e N, N [H], NO, NO [H], NO, NO2[H], N2O, N2O[H] para o modo negativo. Nos diagramas de DBE contra o número de carbono, os asfaltenos mostraram para cada valor de DBE uma pequena amplitude de compostos com respeito à NC, proporcionando assim, imagens que formam uma linha de 45 ° entre os eixos CN e DBE. Isto indica que estes compostos não exibem grandes cadeias de alquílicas, sendo composta principalmente por anéis aromáticos. Em geral os diagramas de van Krevelen mostraram alta proporção de compostos com razão H/C ~0,7, corroborando com a existência de espécies altamente aromáticas / Petroleum is a complex mixture, being one of the most challenging mixtures for chemical analyzes. Many techniques are employed to characterize constituents of the oil. However , when we combine the highest resolving power and accuracy of mass spectrometry , especially Ion Cyclotron Resonance Fourier Transform ( FT - ICR MS ) with sources of atmospheric pressure ionization , an assignment need more than 20 000 organic compounds in the oil can be obtained. In the oil industry there is a great interest in the analysis of asphaltenes and naphthenic acids due to problems such as corrosion and deposit formation, which increases production costs. Therefore this study aims to evaluate the thermodegradation of naphthenic acids, besides the use of sources of ESI, APCI, APPI, MALDI and LDI for the acquisition of new data on the characterization of asphaltenes . Two test oils were used in thermodegradation of the oil with an acidity of 2.38 mg KOH g -1 and Oil B with 4.79 mg KOH g- 1 which were treated at 280 , 300 and 350 ° C for a period of 2 , 4 and 6 hours. Generally, the major classes identified for both samples O2, NO2, and C, respectively. A slight reduction of NAT and relative abundance refers to the class O2 were observed as a function of temperature and aging time (T = 280 → 300 ° C t = 2 → 6 h), and the heat treatment temperature at 350 ° C showed a determinant for the removal of class O2. The chemical asphaltenes Brazilian samples was evaluated using five different methods of ionization in both modes of ionization: positive and negative, then the molecular weight distribution, distribution class, typical plots versus carbon number and DBE van Krevelen diagrams were obtained and discussed. An unusual behavior was observed for the LDI and MALDI source ( ± ) FT - ICR MS . A comprehensive profile of m / z 500-3000, with spacing of 24 Da was observed, and this corresponds to allotropes of fullerene C60. In general, the asphaltenes had an heteroatómicas high proportion of species such as HC , HC [ H] , N, [ H] , N2O N2O [ H] N2, N2 [ M ] O O [ H] to mode (+) and N, [ H ] , NO [ H] , NO , NO2, [ H] , N2O N2O [ H ] for the negative mode . In the diagrams DBE against the carbon number , the asphaltenes shown for each value of DBE composed of a small amplitude with respect to NC, thus providing images that form a line of 45 ° between the axes CN and DBE. This indicates that these compounds do not exhibit large chain alkyl, composed mainly of aromatic rings. In general diagrams van Krevelen showed a high proportion of compounds ratio H / C ~ 0.7, confirming the existence of highly aromatic species

Although gas and liquid chromatography have emerged as dominant separation techniques in environmental analytical chemistry, these methods do not allow for the concurrent analysis of chemically diverse groups of persistent organic pollutants (POPs). There are also a small number of compounds which are not easily amenable to either of these traditional separation techniques. The main objective of this thesis was to address these issues by demonstrating the applicability of packed column supercritical fluid chromatography (pSFC) coupled to mass spectrometry (MS) in various aspects of environmental chemistry. First, pSFC/MS analytical methods were developed for legacy POPs (PCDDs, PCDFs, and PCBs) as well as the emerging environmental contaminant Dechlorane Plus (DP), and issues relating to the ionization of target analytes when pSFC was coupled to MS were explored. Novel APPI and APCI reagents (fluorobenzene and triethylamine) were optimized and real samples (water and soil) were analyzed to demonstrate environmental applicability. The possibility of chiral and preparative scale pSFC separations was then demonstrated through the isolation and characterization of thermally labile hexabromocyclododecane (HBCDD) stereoisomers. The analytical pSFC separation of the α-, β-, and γ-HBCDD enantiomers as well as the δ and ε meso forms was shown to be superior to results obtained using a published LC method. Finally, technical mixtures of phosphorus flame retardants (RBDPP, BPA-BDPP, and DOPO; a group of related compounds which are challenging to analyze concurrently) were examined using multiple analytical techniques and pSFC was found to be the only method which facilitated the accurate determination of the components of all 3 mixtures. This thesis confirms the potential of pSFC/MS as a fast, green, and cost effective means of separating and analyzing environmental contaminants.

L’objectif de ce projet doctoral a été de coupler la chromatographie en phase supercritique (SFC) avec un spectromètre de masse haute résolution pour l’analyse de substances naturelles apolaires. La SFC est une technique dite « verte » contrairement à la chromatographie liquide en phase normale (NPLC), très consommatrice de solvants organiques toxiques pour l’environnement, puisque la phase mobile est principalement constituée de CO2. Le CO2 ayant une faible viscosité, cela implique une diffusivité, des débits élevés et des temps d’analyse courts. Notre attention a été focalisée sur des molécules apolaires : les lipides. Le but était de mettre au point des dosages dans des matrices alimentaires et biologiques et de débuter une approche lipidomique d’étude de la maladie de Parkinson. La première partie a été dédiée au développement du système SFC avec une détection UV, prêté par le constructeur Agilent Technologies. La première étude s’est portée sur 6 composés de la famille des vitamines A. Une phase d’optimisation a été réalisée afin d’obtenir une séparation satisfaisante des composés, en testant différents paramètres chromatographiques comme le type de phase stationnaire ou encore la composition de la phase mobile, afin d’obtenir une résolution optimale. Ensuite, des études de linéarité et de répétabilité ont été réalisées et des limites de détection et de quantification ont été déterminées afin d’obtenir une méthode fiable et robuste. Une deuxième partie a concerné la mise en place du couplage entre la SFC et un spectromètre de masse de type quadripôle-temps de vol (Q-TOF), afin d’améliorer la spécificité et la sensibilité des analyses. Différentes sources d’ionisation ont été utilisées : ESI, APCI et APPI. Chacune des sources présente des modes d’ionisation différents, qui permettent de pouvoir balayer une large gamme de polarité des analytes. Nous avons choisi 8 dérivés de la vitamine E, composés apolaires pour lesquels la SFC paraît être la technique d’analyse idéale. La séparation de ces composés a été optimisée de façon à obtenir une bonne résolution chromatographique et un temps d’analyse minimal. L’ionisation des composés est réalisée avec les 3 sources disponibles en faisant varier les paramètres de sources ou encore le solvant « make-up », de façon à obtenir une sensibilité optimale. La source APPI a été finalement choisie après une étude sur les performances de la méthode. Cette source présente une bonne répétabilité, linéarité et des limites de détection de l’ordre de celles retrouvées dans la littérature par HPLC-MS. Nous avons ensuite réalisé la quantification des ces composés dans 2 types de matrices alimentaire et biologique : l’huile de soja et le plasma de rat. Une troisième partie a été débutée sur le profilage de lipides à polarités variées par SFC-MS. Cette technique se révèle idéale de par la faible polarité de ces composés et leur absence d’absorbance dans le domaine UV. En effet, l’intégrité des lipides peut être altérée suite aux dommages causés par les radicaux libres, qui sont potentiellement impliqués dans de nombreuses maladies neurodégénératives. Il parait primordial de développer des outils analytiques présentant une haute sensibilité et résolution et la possibilité d’accéder aux informations structurales. La source d’ionisation ESI nous a permis de détecter 12 lipides sur les 20 sous-classes analysées en mode positif et 8 lipides en mode négatif. Une application a été réalisée sur un échantillon de plasma humain. Il serait intéressant à l’avenir d’effectuer cette étude en utilisant la source APPI, source propice à l’analyse structurale de lipides et présentant une bonne sensibilité et répétabilité. Ce couplage SFC-MS, présentant une bonne sensibilité et répétabilité, sera par la suite étendu à l’analyse de lipides dans diverses matrices biologiques et pourra à l’avenir être appliqué à l’étude de nouveaux biomarqueurs et au screening rapide d’un grand nombre d’échantillons / The aim of this PhD project was to couple supercritical fluid chromatography (SFC) with a high resolution mass spectrometer for apolar natural compounds analysis. Because mobile phase is principally constituted of CO2, SFC is called “green technic” contrary to normal phase liquid chromatography (NPLC), which uses lot of organic solvents toxic for environment. The CO2 presents a low viscosity, in this way high diffusivity and flow rate, and lower analysis times are obtained. Our work was focused on apolar molecules: the lipids. The aim was to quantify molecules in alimentary and biological matrices and to a lipidomic approach to study Parkinson disease. The first part was to develop the system SFC with a UV detection on a system on loan by Agilent Technologies. This first study was carried out on 6 vitamin A compounds. An optimization of chromatographic parameters has been realized in order to obtain a good separation of the compounds. Then, linearity, repeatability, detection and quantification limits have been determined in order to have a reliable and robust method. A second part concerned the coupling of SFC and a quadrupole time-of-flight mass spectrometer (Q-TOF), in order to improve specificity and sensitivity of analysis. Different ionization sources have been tested: ESI, APCI and APPI. Each ion source presents different ionization mode, which permits to analyze a wide range of polarities of compounds. We have chosen 8 vitamin E derivatives, which are apolar compounds for which SFC seems to be well suited. Separation compounds have been optimized in order to have a good chromatographic resolution and a short analysis time. This compounds ionization is realized with the 3 sources, varying ionization parameters and make-up solvent, to have an optimal sensitivity. The APPI source has been chosen after a performance evaluation method. This source presents a good repeatability, linearity and detection limit in the same order of magnitude than those found in the literature by HPLC-MS. Then we have quantified these compounds in alimentary and biological matrices: a soya oil and plasma rat. A third study has been started on lipid profiling with various polarities by SFC-MS. This technic is well suited because of the low polarity of this molecules and their lack of absorbance in the UV range. The integrity of lipids can be altered with damages caused by free radicals, and are potentially involved in neurodegenerative diseases. It is essential to develop analytical systems with a high sensitivity and resolution and the possibility to access to structural information. The ESI source permits to detect 12 lipids on the 20 sub-classes analyzed in positive ion mode and 8 lipids in negative mode. An application has been realized on human plasma. In the future, it will be interesting to analyze these lipids with the APPI source, which is good choice for structural analysis of lipids, with good sensitivity and repeatability. Studies with this SFC-MS system, presenting good sensitivity and repeatability, will be extended to lipid analysis in biological matrices and could be applied to new biomarkers study and for fast screening of a large number of samples

This dissertation is a composite of some of the research that I have conducted during the course of my PhD study. The larger goal of this dissertation is to renew the interests among the scientific community for an otherwise under-appreciated technique called Isothermal Titration Calorimetry. The resurgence of calorimetry in the biophysical community and the shift to investigations of more complex biological systems signal a real need for more sophisticated analysis techniques. This dissertation expounds on new ITC analysis methods that we have developed as well as results from the study of thermodynamic properties of higher order DNA structures. In 1978, Peter Privalov described the first use of microcalorimetry to obtain the thermodynamic properties for removing calcium from parvalbumin III protein. Fast forward 36 years: modern day electronics, highly efficient thermally conductive and chemically inert materials, in conjunction with sensitive thermal detectors, has transformed the original calorimeter into a device capable of measuring heat changes as small as 0.05 nanowatts, which is equivalent to capturing heat from an incandescent light bulb a kilometer away. However, analytical methods have not kept pace with this technology. Commercial ITC instruments are typically supplied with software that only includes a number of simple interaction models. As a result, the lack of analysis tools for more complex models has become a limiting factor for many researchers. We have recently developed new ITC fitting algorithms that we have incorporated into a userriendly program (CHASM©) for the analysis of complex ITC equilibria. In a little over a year, CHASM© has been downloaded by over 370 unique users. Several chapters in this dissertation demonstrate this software’s power and versatility in the thermodynamic investigations of two model systems in both aqueous and non-aqueous media. In chapter VI, we assembled a model NHE-III1 : a novel structure of Gquadruplex in a double stranded form and studied its structural complexity and binding interactions with a classical G-quaduplex interactive ligand known as TMPyP4. In chapter VII, we reported the thermodynamic properties of a novel PAH system in which weak dispersion forces are solely responsible for formation of the supramolecular complexes.

This study presents an analysis of the organic matter in meteorites, particularly carbonaceous chondrites (CCs), using advanced experimental techniques such as Two-step laser desorption laser ionization mass spectrometry (L2MS-oTOF) and Atmospheric Pressure Photoionization-Orbitrap (APPI-Orbitrap). The analysis focuses on the molecular complexity of both soluble (SOM) and insoluble (IOM) organic matter as well as the bulk rock and identifying and classifying different molecular families to understand the chemical composition of the meteorites. A new software tool, SpectraC, was developed to aid in analysing and comparing mass spectra from multiple meteorite samples simultaneously. The findings of the study reveal the complex chemical composition of meteorites, with condensed aromatics dominating most samples, and highlight the importance of using multiple techniques for a more complete understanding of the sample’s contents. This research lays the foundation for future work in astrochemistry, including the development of a state-of-the-art analytical tool and further exploration of the organic matter in meteorites. / Cette étude présente une analyse de la matière organique dans les météorites, en particulier les chondrites carbonées (CC), en utilisant des techniques expérimentales avancées telles que la spectrométrie de masse à ionisation laser par désorption en deux étapes (L2MS-oTOF) et l’ionisation photochimique à pression atmosphérique-Orbitrap  (APPI-Orbitrap). L’analyse se concentre sur la complexité moléculaire de la matière organique soluble (SOM) et insoluble (IOM) ainsi que sur la roche globale, et identifie et classe différentes familles moléculaires pour comprendre la composition chimique des météorites. Un nouvel outil logiciel, SpectraC, a été développé pour aider à analyser et comparer les spectres de masse de plusieurs échantillons de météorites simultanément. Les résultats de l’étude révèlent la composition chimique complexe des météorites, avec une domination des aromatiques condensés dans la plupart des échantillons, et mettent en évidence l’importance d’utiliser plusieurs techniques pour une compréhension plus complète du contenu des échantillons. Cette recherche pose les bases des travaux futurs en astrochimie, y compris le développement d’outils analytiques de pointe et l’exploration plus poussée de la matière organique dans les météorites.