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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
151

An in vitro investigation into the protective and genotoxic effects of myricetin bulk and nano forms in lymphocytes of MGUS patients and healthy individuals

Akhtar, Shabana, Najafzadeh, Mojgan, Isreb, Mohammad, Newton, L., Gopalan, Rajendran C., Anderson, Diana 15 June 2020 (has links)
Yes / The present study investigated the genoprotective and genotoxic effects of myricetin bulk (10 μM) and nano forms (20 μM) in the lymphocytes from pre-cancerous, monoclonal gammopathy of unknown significance (MGUS) patients and healthy individuals using the Comet and micronucleus assays. The study also evaluated the effect of myricetin on P53 expression levels, using the Western blot technique. Results showed that throughout the in-vitro treatment, lymphocytes from the patients group had higher levels of baseline DNA damage compared to the healthy group. Myricetin in both forms induced significant DNA damage, only at higher concentrations (>40 μM). The micronucleus assay showed a significant reduction (P < 0.01) in the frequency of micronuclei in mono-nucleated cells in the patient group treated with the nano form of myricetin at the non-toxic dose of 20 μM. There was a significant increase in both gene and protein P53 levels in lymphocytes isolated from healthy individuals and pre-cancerous patients. These results suggested a protective effect of myricetin and indicated its nutritional supplement potential for protection against cancer development among patients suffering from MGUS. / This study was kindly funded by Mr Nasir Qayyum, Bradford, UK.
152

Développement d’un biomarqueur de qualité spermatique chez deux espèces de crevettes Palaemonidae : état des lieux le long du continuum estuaire / littoral de la Seine / Development of biomarker of sperm quality in two shrimp species of Palaemonidae : inventory along the estuary / littoral continuum of the Seine

Erraud, Alexandre 25 May 2018 (has links)
La fitness et a fortiori la survie d'une population dépendent de la stratégie et des performances de reproduction façonnées par son environnement. Par conséquent, les biomarqueurs traduisant une altération de la fonction de reproduction présentent un intérêt particulier. L'atteinte de la fertilité mâle au sein de la faune sauvage a notamment été adressée comme une problématique majeure susceptible de représenter une menace pour le maintien des populations. Toutefois, peu de méthodologies sont aujourd'hui disponibles chez des espèces pertinentes pour aborder cette problématique dans le cadre de programmes de biosurveillance environnementale, notamment chez les crustacés en dépit de leur représentativité au sein du règne animal et de leurs indispensables fonctions au sein des écosystèmes. Dans ce contexte, les présents travaux avaient pour objectif de proposer une ou plusieurs méthodologies basées sur la mesure de marqueurs de fonctionnalité et d'intégrité spermatique chez des crevettes Palaemonidae. Les investigations se sont portées sur deux espèces, une estuarienne, Palaemon longirostris, et une côtière, Palaemon serratus, pour leur complémentarité vis-à-vis du continuum estuaire - littoral. Compte tenu des nombreuses spécificités structurelles et fonctionnelles des spermatozoïdes de crustacés, I nombre de marqueurs transposables vers ces espèces s'est finalement avéré limité. Aussi, après une brève prospection, l'effort de recherche a rapidement été recentré sur la mesure de l'intégrité de l'ADN. Dès lors, la démarche scientifique a été construite de sorte à évaluer, point par point, la pertinence de la méthodologie développée dans une perspective d'application de l'outil dans le cadre de la surveillance environnementale. Une étape préliminaire d'optimisation et de validation méthodologique du test Cornet a démontré que, contrairement à une grande majorité de type spermatique, l'adaptation de ce test sur les spermatozoïdes de Palaemonidae ne nécessite aucune modification particulière du protocole. La dynamique de la réponse biologique en termes d'apparitions, de rémanence et d'effets possibles sur la fitness a été évaluée en conditions contrôlées au laboratoire. Ainsi, des expositions ex vivo et in vivo ont été conduites en utilisant une variété de génotoxiques modèles présentant différents modes d'actions. Les résultats ont attesté de la sensibilité, de la reproductibilité et du caractère intégrateur de la réponse. En revanche, aucun lien entre un ADN spermatique endommagé et une altération du succès de reproduction pré-éclosion n'a pu être établi. Parallèlement, une approche in situ a été conduite en vue de caractériser la valeur basale de la réponse mesurée. Différentes stratégies ont dû être adoptées en fonction des contraintes propres au milieu de vie de chacune des deux espèces. Un référentiel et une valeur seuil, communs aux deux espèces, ont pu être définis, soulignant le potentiel de transférabilité inter-espèces de l'outil. La méthodologie ainsi finalisée, a été éprouvée dans le cadre de plusieurs campagnes de suivi de différentes populations indigènes de l'estuaire et de la baie de Seine en 2015 et 2016. Les résultats se sont révélés très cohérents au regard de la pression de contamination et de la dynamique hydro-sédimentaire de la baie de Seine. En définitive, l'intégrité de l'ADN spermatique chez les Palaemonidae est opérationnelle en l'état pour un déploiement in situ en tant que biomarqueur d'exposition à un stress génotoxique. De futurs études devront néanmoins être conduites (1) pour mieux discerner les implications de ces dommages spermatiques en termes d'impact sur le recrutement des nouvelles cohortes et (2) éprouver la transférabilité de la méthodologie à d'autres espèces de crevettes et sur une plus large échelle géographique. / The environment shapes the reproduction's strategy and performance of a population, influencing its fitness and a fortiori its survival. Therefore, biomarkers that alter reproductive functions represent a great interest in ecotoxicology. The reduction of male fertility in wildlife can represent a threat to the population's survival. Moreover, fcw methodologies are available for species that are relevant to address this issue on envimnmental biomonitoring programs, especially for crustaceans, despite their representativeness in the wildlife and their essential functions within ecosysterns. The present work aimed to propose methodologies based on the measurement of functionality and integrity spermatic biomarkers on Palaemonidae shrimps. We studied two species, an estuarine, Palaemon longirostris, and a coastal species. Palaemon serratus. due to their complementaiity on the continuum estuary-littoral ecosystem. Howevcr, crustaceans' sperm has many structuraI and functional characteristics, the number of transposable markers is limited. Thereafter, the research effort was refocused on the measurement of the DNA integrity and this inethod was evaluated for its adequacy for a biomonitoring study. We optitrtized and validate the Cornet assay for the Palaemonidae species, and the dynamic of the biological response in ternis of appearances, persistence, and possible effects on fitness was evaluated under controlled conditions in the laboratoiy. Furthermore, ex-vivo and in-vivo exposures were conducted using genotoxic models with different modes of action. On the one hand, results attested to the sensibility, the reproducibility and the integrating character of the response, on the other hand, no correlation between damaged sperm DNA and an altération of the pre-hatch stage of development was established. In paralIel, an in-situ approach was conducted to characterize the baseline level of the measured response, taking into consideration the specific constraints of each species' habitat. We were able to define a common baseline level and a threshold value for both species, highlighting the potential of the tool for inter-species transferability. This method was tested with native populations from the estuary and from the Seine Bay in 2015 and 20] 6. And, the results proved to be consistent with the contamination pressure and the hydro-sedimentary dynamics of the Seine Bay. Ultimately, the DNA integrity of sperm in Palaemonidae seems to be functional for in-situ deploytnents as a biomarker of exposure to genotoxic stress. Nevertheless, future studies should be conducted (1) to botter discern the implications of this spermatic damage on the recruitment of new cohorts and, (2) to test the transferability of the methodology to other shrimp species and on a wider geographical scale.
153

Study of the genotoxicity mechanisms of all-trans retinoic acid and its analogue EA-4

Alakhras, Raghda Said H. 07 October 2011 (has links)
Vitamin A and its metabolites retinal and retinoic acid are important molecules for the regulation of normal cellular growth, differentiation and other important functions. Retinoids are known to exert mutagenic as well as antimutagenic activity, although conflicting reports are known. All-trans retinoic acid (ATRA) is used in the treatment of many diseases such as acne, psoriasis and ichthyosis. It is also used in differentiated therapy of acute promyelocytic leukemia; however, it is frequently observed that relapses occur when ATRA is prescribed as maintenance therapy. Therefore, understanding the mechanism of action of ATRA in cells would be helpful in the development of high potent and low toxic chemotherapeutic agents. EA-4 is a newly synthesized steroidal analogue of ATRA and is considered as a promising agent for the inhibition of human leukemic cell growth. The study of genotoxicity is an important parameter for the design and development of new chemotherapeutic agents. Genotoxic effects of anticancer drugs in non-tumour cells are of special significance due to their possibility of inducing secondary tumours in cancer patients. Therefore, it is important to determine the genotoxic potential of a drug that will be used in chemotherapy, particularly in native human cells. Taking into consideration the above referred, it would be of interest to evaluate the genotoxic potential of EA-4 in comparison to ATRA, as to their ability to provoke micronucleus (MN) generation, due to both chromosome breakage and chromosome delay. Micronuclei originate from chromosome fragments or whole chromosomes, which lag behind at anaphase during nuclear division. According to our knowledge, there is no information on the ability of all-trans retinoic acid (ATRA) to induce micronucleus formation. To investigate the ability of ATRA and its steroidal analogue EA-4 to enhance micronucleation on human lymphocytes cultured in vitro, the Cytokinesis Block MicroNucleus (CBMN) assay was conducted. By this assay, the cytotoxic effect of the two retinoids was also estimated. To clarify the mechanism by which micronuclei are generated due to ATRA and EA-4 treatment, CBMN was combined with Fluorescence In Situ Hybridization (FISH) using an α-satellite pancentromeric probe to detect centromere inclusion and thus intact chromosome(s) in micronuclei or acentric chromosome fragments. ATRA and EA-4 were shown to be cytotoxic by decreasing CBPI (Cytokinesis Block Proliferation Index) to statistically significant levels in relation to untreated cells. A statistically significant increase in micronucleus frequency was also observed for both investigated compounds. ATRA generated micronuclei mainly via chromosome breakage while a mild effect on chromosome delay was also apparent. On the other hand, EA-4 generated micronuclei exclusively via chromosome breakage. To verify ATRA and EA-4 genotoxicity, micronucleation was investigated in a second biological system coming from a different organism, C2C12 mouse cells. Micronucleus analysis was achieved by α-tubulin/CREST immunostaining for the visualization of microtubules and the detection of kinetochore inside micronuclei and hence the inclusion of whole chromosome(s) or acentric chromosome fragments. Additionally the effect of ATRA and EA-4 on cell proliferation was investigated by the estimation of Mitotic Index (M.I.). We found that ATRA and EA-4 exerted cytotoxic activity in C2C12 mouse cells by reducing the cell proliferation rate at significant levels, as evaluated by the decrease of M.I. A statistically significant elevation in the frequency of interphase cells with micronuclei was shown. CREST analysis confirmed the clastogenic activity of the studied retinoids that was indicated in human lymphocytes. Micronucleation due to ATRA was mediated mainly by chromosome breakage and in a lesser extent by chromosome delay. EA-4 was shown to induce chromosome breakage as well as chromosome delay, as opposed to human lymphocytes at which only clastogenic effect was shown. These observations suggest that, ATRA and EA-4 are able to provoke chromosome fragmentation, but additionally and in a lesser extent to disturb chromosome segregation at anaphase due to chromosome lagging. Cell cycle analysis showed that ATRA and EA-4 accumulated cells at ana-telophase. The analysis of ana-telophases revealed micronucleation, nucleoplasmic bridges and multinucleation, phenomena that may explain the dual genetic activity of ATRA and EA-4. Multinucleated and multimicronucleated interphase cells were also apparent, the second ones generated due to both chromosome delay and breakage. To further investigate the mechanism of genotoxic activity of ATRA and EA-4 we proceeded our research on two axes based on their aneugenicity and clastogenicity. Thus we studied the effect of ATRA and EA-4: i) on the integrity of mitotic spindle, as a target of aneugens by using double immunofluorescence staining of β- and γ-tubulin in C2C12 mouse cell line, which is a convenient system to apply this experimental procedure, and ii) to investigate the ability of the studied retinoids to induce double-strand breaks on DNA by using neutral Single Cell Gel Electrophoresis (SCGE assay-Comet assay) in two different cell lines, C2C12 mouse cells and HL-60 human leukemic cells. Analysis of mitotic spindle has shown that the studied retinoids affect chromosome orientation during metaphase by inducing bipolar metaphases with non-congressed genetic material due to abnormal microtubule network. In addition defects on centrosome duplication and/or separation were observed due to the presence of monopolar metaphases. Ana-telophases as well as interphases with supernumerary centrosomes were also apparent. Additionally, interphase cells with abnormal microtubule network were observed. The above findings may explain aneugenic as well as clastogenic activity of the studied retinoids. Comet assay revealed that ATRA and its steroidal analogue EA-4 provoke DNA migration due to double strand DNA fragmentation in both C2C12 mouse cells and HL-60 human leukemic cells. EA-4 was shown to be the stronger inducer of DNA fragmentation. These results confirm the findings from FISH and CREST analysis indicating that the studied retinoids show high clastogenic activity. . Taking into account the above, we may say that our findings clarify the cytotoxic and genotoxic activity of retinoic acid and the mechanism of its action by indicating its ability to induce chromosome breakage via double-strand DNA breaks and secondary its ability to provoke chromosome delay due to defects in microtubule network and mitotic spindle integrity. / Η βιταμίνη Α και οι μεταβολίτες της, ρετινόλη και ρετινοϊκό οξύ είναι ισχυροί παράγοντες για τη ρύθμιση σημαντικών λειτουργιών, όπως της κυτταρικής ανάπτυξης, διαφοροποίησης και άλλων. Τα ρετινοειδή είναι γνωστά για την μεταλλαξιγόνο αλλά και αντιμεταλλαξιγόνο δράση τους, αν και έχουν αναφερθεί αντικρουόμενα ευρήματα. Το all-trans ρετινοϊκό οξύ (ATRA) χρησιμοποιείται στη θεραπεία πολλών ασθενειών, όπως η ακμή, ψωρίαση, ιχθύωση, αλλά και στη θεραπεία κακοηθειών όπως η μυελογενής λευχαιμία. Συχνά σε περιπτώσεις όπου το ATRA αποτελεί τη βασική θεραπεία παρατηρούνται υποτροπιάσεις Έτσι, η κατανόηση του μηχανισμού δράσης του ATRA στα κύτταρα θα αποτελέσει χρήσιμο εργαλείο για την ανάπτυξη νέων, ισχυρών και μη-τοξικών θεραπευτικών παραγόντων προερχόμενων από αυτό. Το EA-4 είναι ένα πρόσφατα συντεθέν στεροειδικό ανάλογο του ATRA, που θεωρείται υποσχόμενος παράγοντας για την αναστολή της ανάπτυξης ανθρώπινων λευχαιμικών κυττάρων. Η μελέτη της γονιδιοτοξικότητας αποτελεί σημαντική παράμετρο για το σχεδιασμό και την ανάπτυξη νέων θεραπευτικών παραγόντων. Οι γονιδιοτοξικές επιπτώσεις αντικαρκινικών φαρμάκων σε μη-καρκινικά κύτταρα είναι ιδιαίτερης σημασίας, και αποτελούν πιθανή αιτία εμφάνισης δευτερογενών όγκων σε ασθενείς. Έτσι, είναι σημαντικό να μελετηθεί η γονιδιοτοξική δράση ενός φαρμάκου που θα χρησιμοποιηθεί στη χημειοθεραπεία. Λαμβάνοντας υπόψη όλα τα παραπάνω, θεωρήθηκε ενδιαφέρον να εκτιμηθεί η γονιδιοτοξικότητα του EA-4 σε σύγκριση με το ATRA ως προς την ικανότητά τους να προκαλούν την εμφάνιση μικροπυρήνων (MN) είτε μέσω της χρωμοσωματικής θραύσης είτε μέσω της χρωμοσωματικής καθυστέρησης. Οι μικροπυρήνες προέρχονται από χρωμοσωματικά θραύσματα ή ολόκληρα χρωμοσώματα, τα οποία καθυστερούν κατά την ανάφαση της μείωσης ή της μίτωσης. Σύμφωνα με όσα μέχρι σήμερα γνωρίζουμε, δεν φαίνεται να υπάρχουν στοιχεία που αφορούν την ικανότητα του all-trans ρετινοϊκού οξέος (ATRA) να επάγει το σχηματισμό μικροπυρήνων. Για τη διερεύνηση της ικανότητας του ATRA και του στεροειδικού αναλόγου του EA-4 να επάγει την εμφάνιση μικροπυρήνων, πραγματοποιήθηκε η μέθοδος αναστολής της κυτταροκίνησης (CBMN assay) σε ανθρώπινα λεμφοκύτταρα in vitro. Με την ίδια μέθοδο εκτιμήθηκε και η κυτταροτοξικότητα των δύο ρετινοειδών. Για την διευκρίνιση του μηχανισμού δημιουργίας των μικροπυρήνων από τη δράση των ATRA και EA-4, η μέθοδος CBMN συνδυάστηκε με την in situ υβριδιποίηση με φθοροχρώματα (FISH) και χρήση α-δορυφορικού (α-satellite) πανκεντρομερικού ανιχνευτή για την επισήμανση του κεντρομέρους και την ανίχνευσή του σε μικροπυρήνες. Η παρουσία σήματος υβριδοποίησης στους μικροπυρήνες υποδηλώνει την ύπαρξη άθικτου χρωμοσώματος στο εσωτερικό τους. Το αντίθετο υποδεικνύει την παρουσία άκεντρου χρωμοσωματικού θραύσματος. Τα αποτελέσματα έδειξαν ότι και οι δύο χημικές ενώσεις προκαλούν στατιστικά σημαντική αύξηση της συχνότητας των μικροπυρήνων Το ATRA οδηγεί στην δημιουργία μικροπυρήνων κυρίως μέσω χρωμοσωματικής θραύσης, και σε ηπιότερο βαθμό μέσω χρωμοσωματικής καθυστέρησης. Αντίθετα, το EA-4 επάγει το σχηματισμό μικροπυρήνων αποκλειστικά μέσω χρωμοσωματικής θραύσης. Επίσης το ATRA και το EA-4 παρουσάζουν ισχυρή κυτταροτοξικότητα, όπως φάνηκε από τη στατιστικά σημαντική μείωση του κυτταρικού δείκτη πολλαπλασιασμού (CBPI), σε σύγκριση με τις καλλιέργειες του μάρτυρα. Προκειμένου να επιβεβαιωθεί η γονιδιοτοξικότητα του ATRA και του EA-4, διερευνήθηκε η ικανότητά τους να προκαλούν αυξημένες συχνότητες μικροπυρήνων σε ένα δεύτερο βιολογικό σύστημα, την κυτταρική σειρά ποντικού C2C12. Η ανάλυση των MN πραγματοποιήθηκε με τη μέθοδο διπλού ανοσοφθορισμού α-τουμπουλίνης/CREST, για την ανίχνευση σήματος κινητοχώρου στο εσωτερικό του μικροπυρήνα κι έτσι την παρουσία ολόκληρου χρωμοσώματος. Επίσης,η κυτταροτοξικότητα τους διερευνήθηκε με την εκτίμηση του μιτωτικού δείκτη. Με τη ίδια μέθοδο αναλύθηκε η πρόοδος του κυτταρικού κύκλου. Παρατηρήθηκε ότι το ATRA και το EA-4 παρουσιάζουν κυτταροτοξική δράση στα κύτταρα C2C12 μειώνοντας το ρυθμό κυτταρικού πολλαπλασιασμού σε στατιστικά σημαντικά επίπεδα. Επιπλέον αποκαλύφθηκε στατιστικά σημαντική αύξηση της συχνότητας κυττάρων με μικροπυρήνες. Η επισήμανση του κινητοχώρου επιβεβαίωσε τη θραυσματογόνο δράση των υπό μελέτη ρετινοειδών που παρατηρήθηκε στα ανθρώπινα λεμφοκύτταρα. Η δημιουργία μικροπυρήνων μέσω του ATRA ήταν αποτέλεσμα κυρίως χρωμοσωματικής θραύσης και σε μικρότερη έκταση χρωμοσωματικής καθυστέρησης, σε συμφωνία με τα ευρήματα από τα πειράματα στις καλλιέργειες ανθρώπινων λεμφοκυττάρων. Αντίθετα, παρατηρήθηκε ότι το EA-4, πλην της ισχυρής θραυσματογόνου δράσης, προκαλεί και χρωμοσωματική καθυστέρηση. Οι παρατηρήσεις αυτές υποδεικνύουν ότι το ATRA και το EA-4 είναι ισχυροί θραυσματογόνοι παράγοντες, αλλά σε μικρότερο βαθμό είναι ικανοί να διαταράξουν και τον χρωμοσωματικό αποχωρισμό κατά την πυρηνική διαίρεση. Η μελέτη του κυτταρικού κύκλου έδειξε ότι τόσο το ATRA και όσο και το EA-4 προκαλούν καθυστέρηση συσσωρεύοντας τα κύτταρα στα στάδια ανάφασης και τελόφασης της πυρηνικής διαίρεσης. Κύτταρα που συσσωρεύονται στα παραπάνω στάδια χαρακτηρίζονται από την εμφάνιση πυρηνοπλασματικών γεφυρών, την παρουσία περισσότερων του ενός πυρήνων, αλλά και την παρουσία μικροπυρήνων, φαινόμενα τα οποία είναι σύμφωνα με τη διττή γενετική δράση των ATRA και EA-4. Επίσης, παρατηρήθηκαν πολυπύρηνα μεσοφασικά κύτταρα και μεσοφασικά κύτταρα με πολλαπλούς μικροπυρήνες, με τον δεύτερο τύπο κυττάρων να προέρχεται τόσο από χρωμοσωματική θραύση όσο και από χρωμοσωματική καθυστέρηση. Έτσι, φαίνεται ότι τα δύο υπό μελέτη ρετινοειδή μπορούν να χαρακτηρισθούν μόρια με θραυσματογόνες αλλά και ανευπλοειδογόνες ιδιότητες. Για τη λεπτομερέστερη ανάλυση του μηχανισμού δράσης του ATRA και του EA-4 σχεδιάσθηκαν πειράματα σε δύο βασικούς άξονες που αφορούσαν την περαιτέρω μελέτη τόσο της ανευπλοειδογόνου όσο και της θραυσματογόνου δράσης τους. Έτσι, μελετήθηκε η επίδραση του ATRA και του EA-4 αντίστοιχα ως προς: α) την ακεραιότητα της μιτωτικής συσκευής, η οποία αποτελεί κυτταρικό στόχο ανευπλοειδογόνων ενώσεων. Η μελέτη πραγματοποιήθηκε στην κυτταρική σειρά C2C12, μέσω της μεθόδου διπλού ανοσοφθορισμού για τη β- και γ-τουμπουλίνη, δομικά στοιχεία των μικροσωληνίσκων και του κεντροσώματος, και β) την δημιουργία δίκλωνων ρηγμάτων στο DNA μέσω της μεθόδου ηλεκτροφόρησης μοναδιαίων κυττάρων (SCGE assay-Comet assay) σε δύο διαφορετικές κυτταρικές σειρές, στα κύτταρα ποντικού C2C12 και στα λευχαιμικά κύτταρα ανθρώπου HL-60. Τα αποτελέσματα μας έδειξαν ότι τα υπό εξέταση ρετινοειδή επηρεάζουν τον χρωμοσωματικό προσανατολισμό κατά τη μετάφαση με την εμφάνιση διπολικών μεταφάσεων με τα χρωμοσώματα μη-διατεταγμένα στο ισημερινό πεδίο, λόγω ανωμαλιών του δικτύου των μικροσωληνίσκων. Επίσης, φάνηκε ότι προκαλούν ανωμαλία στον πολλαπλασιασμό και πιθανόι στον αποχωρισμό των κεντροσωμάτων, παρατήρηση που δικαιολογείται από την παρουσία μονοπολικών μεταφάσεων, καθώς και ανάτελοφάσεων αλλά και μεσοφασικών κύττάρων με υπεράριθμο κεντροσωματικό αριθμό. Επιβεβαιώθηκε επίσης η επίδρασή τους στην πορεία του κυτταρικού κύκλου με συσσώρευση των κυττάρων στα στάδια ανάφασης-τελόφασης. Επιπρόσθετα, φάνηκε ότι το ΕΑ-4, στη μεγαλύτερη συγκέντρωση, διακόπτει τον κυτταρικό κύκλο στο στάδιο της μετάφασης. Παράλληλα, παρατηρήθηκε διαταραχή στη δομή του δικτύου των μικροσωληνίσκων. Όλα τα παραπάνω ευρήματα ερμηνεύουν τόσο την ανευπλοειδογόνο όσο και τη θραυσματογόνο δράση των δύο ρετινοειδών. Με τη μέθοδο ηλεκτροφόρησης μοναδιαίων κυττάρων δείχθηκε ότι το ATRA και το στεροειδικό του ανάλογο EA-4 προκάλεσαν τη δημιουργία «κομητών», δηλαδή πυρήνων με ανώμαλη μορφολογία μέσω του σχηματισμού δίκλωνων θραυσμάτων DNA. Το φαινόμενο αυτό παρατηρήθηκε τόσο στα κύτταρα ποντικού C2C12 όσο και στα λευχαιμικά κύτταρα ανθρώπου HL-60, με το EA-4 να παρουσιάζει ισχυρότερη επαγωγή θραύσης του DNA. Τα αποτελέσματα αυτά επιβεβαιώνουν τα ευρήματα των μεθόδων FISH και CREST, υποδεικνύοντας ότι τα υπό εξέταση ρετινοειδή παρουσιάζουν ισχυρή θραυσματογόνο δράση. Λαμβάνοντας υπόψη όλα τα παραπάνω, μπορούμε να ισχυριστούμε ότι τα ευρήματά μας διευκρινίζουν την κυτταροτοξική και γονιδιοτοξική δράση του ρετινοϊκού οξέος. Υποδεικνύουν ιδιότητες ισχυρώς θραυσματογόνων παραγόντων μέσω δημιουργίας δίκλωνων ρηγμάτων στο DNA των κυττάρων. Δευτερογενώς μπορούν να χαρακτηρισθούν ως ήπιες ανευπλοειδογόνες ενώσεις που προκαλούν ανώμαλο χρωμοσωματικό αποχωρισμό μέσω ανωμαλιών τόσο του δικτύου των μικροσωληνίσκων όσο και της ακεραιότητα της μιτωτικής συσκευής.
154

Quantifizierung von DNA-Schäden an adhaerenten Zelllinien nach Bestrahlung mit 188 Re- bzw. Röntgenstrahlung unter Zugabe von Methimazol, Nicotinamid und Perchlorat durch den Comet Assay

Kahmann, Cindy 06 May 2008 (has links)
Dissertationsschrift zur Erlangung eines doctor medicinae (Dr.med.) der Medizinischen Fakultät Carl Gustav Carus der Technischen Universität Dresden
155

En undersökning av AI-verktyget Whisper som potentiell ersättare till det manuella arbetssättet inom undertextframtagning / A Study of the AI-tool Whisper as a Potential Substitute to the Manual Process of Subtitling

Kaka, Mailad Waled Kider, Oummadi, Yassin January 2023 (has links)
Det manuella arbetssättet för undertextframtagning är en tidskrävande och kostsam process. Arbetet undersöker AI-verktyget Whisper och dess potential att ersätta processen som används idag. Processen innefattar både transkribering och översättning.  För att verktyget ska kunna göra denna transkribering och översättning behöver den i första hand kunna omvandla tal till text. Detta kallas för taligenkänning och är baserat på upptränade språkmodeller. Precisionen för transkriberingen kan mätas med ordfelfrekvens (Word Error Rate – WER) och för översättningen med COMET-22.  Resultaten visade sig klara av Microsofts krav för maximalt tillåten WER och anses därför vara tillräckligt bra för användning. Resultaten indikerade även att de maskinproducerade översättningarna uppnår tillfredställande kvalitet. Undertextframtagning, som är det andra steget i processen, visade sig Whisper ha svårare för när det gäller skapandet av undertexter. Detta gällde både för transkriberingen i originalspråk samt den engelsköversatta versionen. Kvaliteten på undertexternas formatering, som mäts med SubER-metoden, kan tolkas som för låga för att anses vara användbara. Resultaten låg i intervallet 59 till 96% vilket innebär hur stor del av den automatiskt tillverkade undertexten behöver korrigeras för att matcha referensen.  Den övergripande slutsatsen man kan dra är att Whisper eventuellt kan ersätta den faktiska transkriberings -och översättningsprocessen, då den både är snabbare och kostar mindre resurser än det manuella tillvägagångssättet. Den är dock inte i skrivande stund tillräcklig för att ersätta undertextframtagningen. / The manual process of subtitling creation is a time consuming and costly process. This study examines the AI-tool Whisper and its potential of substituting the process used today. The process consists of both speech recognition and speech translation.  For the tool to accomplish the transcription and translation, it first needs to be able to convert speech-to-text. This is called speech recognition and is based on trained speech models. The precision for the transcription can be measured using the Word Error Rate (WER), while the translation uses COMET-22 for measuring precision.  The results met the requirements for maximal allowed WER-value and were therefore considered to be usable. The results also indicated that the machine produced translations reached satisfactory quality. Subtitle creation, which is the second part of the process, turned out to be more of a challenge for Whisper. This applied to both the transcription in the original language and the English translated version.  The quality of the subtitling format, measured using the SubER-method, can be interpreted as too low to be considered useful. The results were in the interval of 59 to 96% which informs how large part of the automatically created subtitle need to be corrected to match the reference.  The conclusion one can draw is that Whisper could eventually substitute the actual transcription and translation process, since it is both faster and costs less resources than the manual process. Though it is not good enough, in the moment of writing, to substitute the subtitling creation.
156

Röntgenstrahlen induzierte DNA- Doppelstrangbrüche in säugen Zellen in Abhängigkeit vom Zellzyklus. / Induction of DNA double-strand breaks at various stages of the cell cycle using the comet assay.

Attia, Atef 31 October 2002 (has links)
No description available.
157

Avaliação da fototoxicidade do antraceno sobre a mortalidade e o dano ao DNA de juvenis de pampos, Trachinotus carolinus (Linnaeus, 1766) / Assessment of the effect of the phototoxicity of anthracene on the mortality and damage to the DNA of juveniles of Florida pompanos, Trachinotus carolus

Hasue, Fabio Matsu 18 March 2011 (has links)
Os hidrocarbonetos policíclicos aromáticos são tóxicos e/ou genotóxicos para diversos organismos marinhos e a toxicidade de muitos deles aumenta consideravelmente quando expostos à radiação ultravioleta artificial ou natural. O presente estudo visou avaliar a fototoxicidade do antraceno sobre a mortalidade e o dano ao DNA, segundo o ensaio cometa, de juvenis de pampos da espécie Trachinotus carolinus. Os peixes foram previamente expostos ao antraceno por 24 horas no escuro nas concentrações de 8, 16 e 32µg/L. e então transferidos para a água limpa e expostos à luz de lâmpadas fluorescentes ou à radiação ultravioleta B artificial (RUVB-35µW/cm2). Grupos controle (água e solvente) foram submetidos às mesmas condições experimentais. As exposições na ausência da radiação ultravioleta foram realizadas por períodos cumulativos de 10, 20 e 30h (5h/dia). Para as exposições à RUVB foram utilizados períodos desde 2 até 10h. Na ausência de radiação ultravioleta o antraceno não revelou ser tóxico, mas sua genotoxicidade, medida como danos ao DNA, apresenta resposta dose-dependente. A RUVB é letal para pampos. A exposição ao antraceno seguida de 2h de incidência de RUVB acelera a morte dos peixes em relação à mortalidade dos animais não contaminados. Este resultado revelou a fototoxicidade do antraceno para a espécie. O ensaio cometa pode ser considerado uma ferramenta sensível e útil para avaliar o efeito genotóxico de HPAs em peixes marinhos costeiros. / Polycyclic aromatic hydrocarbons are toxic and/or genotoxic to a variety of marine organisms and under solar or artificial ultraviolet radiation acute toxicity of many of them can be substantially enhanced. The aim of the present study was to examine the effect of the phototoxicity of anthracene on the mortality and damage to the DNA, assessed by the comet assay, of juveniles of Florida pompanos, Trachinotus carolinus. The fish were pre-contaminated in the dark by three concentrations of 8, 16 and 32 µg/L of anthracene for 24 hours then transferred to clean seawater to be exposed to fluorescent light or to artificial ultraviolet B radiation (UVB - 35µW/cm2). Control groups (water and ethanol) were carried out in the same experimental conditions. The exposures to fluorescent light were carried out in cumulative periods of 10, 20 and 30 hours (5h/day). The exposures to UVB were conducted during periods of 2 to 10 hours. In the absence of ultraviolet radiation, the anthracene did not prove to be toxic, but its genotoxicity, evaluated as damage caused to the DNA, proved to be dose dependent. The UVB is lethal to Florida pompanos. The exposure of fish to the anthracene following UVB exposure for 2 hours resulted in earlier and higher mortality when compared to uncontaminated fish. These results indicated that anthracene is phototoxic to the pompanos. The comet assay can be considered a sensitive tool to evaluate the genotoxic effect of PAHs in coastal marine fish.
158

Aplicação do ensaio cometa a estudo de danos ao DNA de robalos, Centropomus parallelus (Poey, 1860), expostos à ß-naftoflavona / Comet Assay applied to DNA damage study in fat snook, Centropomus parallelus (Poey, 1860), exposed to &#946;-naphthoflavone

Di Paolo, Carolina 01 September 2006 (has links)
O Ensaio Cometa (Eletroforese em Gel de Célula Única) foi aplicado ao estudo do potencial genotóxico da &#946;-naftoflavona (BNF) em exposição in vivo a eritrócitos de robalos, Centropomus parallelus. Condições específicas para o ensaio cometa de células de sangue de robalos foram estabelecidas com base em informações obtidas em literatura; e através de experimentos com exposição in vitro a diferentes concentrações de peróxido de hidrogênio, e com desenrolamento e eletroforese em diferentes alcalinidades e voltagens. Para avaliar o potencial genotóxico da BNF, os peixes foram expostos a 1ppm e 5ppm de BNF por 24, 48 e 72 horas. Controles foram mantidos em água do mar e em água do mar com DMSO, utilizado com solvente. Células de sangue foram coletadas, submetidas a ensaio cometa em versão alcalina de pH>13 e coradas por prata. Os cometas foram analisados por métodos visuais, incluindo Índice de Danos, Porcentagem de Danos e Freqüência de Danos, e através do sistema de análise de imagem ScionImage. Exposições in vitro de eritrócitos a H2O2 resultaram em relação dose-resposta em pH 12,6 e pH>13, indicando aplicabilidade do ensaio a células de sangue de robalos. Exposições in vivo a BNF indicaram tendência a maior Índice de Danos em grupos expostos comparados a controles, porém não ocorreu diferença significativa estatisticamente. A grande amplitude de variação dos dados, em controles e nos demais grupos experimentais, dificultou sua análise e interpretação. / Single Cell Gel Electrophoresis or Comet Assay was applied to study the genotoxic potential of exposure in vivo to &#946;-naphthoflavone (BNF) on erythrocytes of fat snook, Centropomus parallelus. Specific conditions for the comet assay on fat snook blood cells were established based on information obtained from literature together with results of experiments in which slides were exposed in vitro to different concentrations of hydrogen peroxide, submitted to unwinding and electrophoresis at different alkalinity and different voltages. To assess the genotoxic potential of BNF, fish were exposed in vivo to 1ppm and 5ppm of BNF for 24, 48 and 72 hours. Controls were exposed to sea water only and sea water plus DMSO, used as carrier. Blood cells were collected, submitted to alkaline version of comet assay at pH>13 and silver stained. Comets were analyzed by visual methods including Damage Index, Percentage of Damage and Frequency of Damage, and by ScionImage image analysis system. In vitro expositions of erythrocytes to H2O2 resulted in dose-response relationship, at pH 12,6 and pH>13, indicating applicability of the assay to blood cells of fat snook. In vivo exposure to BNF showed a slight tendency towards a higher Damage Index, though not statistically significant, in exposed groups as compared to controls. Wide amplitude of variations of data, in the controls as well as in other experimental groups, made their analysis and interpretation difficult.
159

Avaliação do dano radioinduzido, capacidade de reparo e morte cecular em células humanas tumorais (T-47D e MCF-7) e não tumorais (MCF-10) de mama / Evaluation of the radioinduced damage, repair capacity and cell death on human tumorigenic (T-47D and MCF-7) and nontumorigenic (MCF-10) cell lines of breast

Valgôde, Flávia Gomes Silva 25 July 2008 (has links)
Câncer de mama é considerado uma das malignidades mais comuns que acometem as mulheres, representando cerca de uma em cada três de todas as neoplasias femininas. Aproximadamente, 90% dos casos de câncer de mama são esporádicos, atribuíveis aos eventos somáticos e cerca de 10% estão associados com a história familial e destes somente 4-5% são decorrentes de fatores hereditários. Em clínica, a radiação ionizante é a principal ferramenta utilizada no controle do crescimento tumoral, além da intervenção cirúrgica e quimioterapia. Há, no entanto, poucas infomnações no que diz respeito a resposta celular frente à ação da radiação ionizante em células-alvo, isto é, em linhagens celulares originárias de câncer de mama. O presente estudo foi proposto para analisar a radiossensibilidade de células humanas tumorals (T-47D e MCF-7) e não tumorals (MCF-10), originárias de mama, submetidas a várias doses (0,5 a 30 Gy) de radiação y de 60Co (0,72 - 1,50 Gy/min). Para tanto, foram utilizados como parâmetros de radiossensibilidade, dano radioinduzido ao DNA, capacidade de reparo e morte celular, por meio das técnicas do micronúcleo, eletroforese de microgel (teste do cometa) e viabilidade celular. Os dados obtidos mostraram que as linhagens tumorais (T-47D e MCF-7) foram mais radiossensíveis que a linhagem não tumoral (MCF-10) para todos os testes utilizados. A linhagem T-47D foi a que apresentou uma maior quantidade de dano radioinduzido, um ciclo celular mais acelerado e uma maior taxa de morte celular. As três linhagens celulares apresentaram uma capacidade de reparo relativamente eficiente, tendo em vista que uma hora após a irradiação, todas elas exibiram uma redução considerável de dano radioinduzido quando comparadas logo após as exposições. Os testes empregados mostraram ser seguros, sensíveis e reprodutíveis e permitiram quantificar e avaliar danos induzidos ao DNA, capacidade de reparo e morte celular, nas três linhagens originárias de mama humana. / Breast cancer is one of the most common malignancies that account women, representing about one in three of all female neoplasm. Approximately, 90% of cases are considered sporadic, attributed to somatic events and about 10% have a family history and this only 4 - 5 % is decurrent of hereditary factors. In the clinic, ionizing radiation is a major tool utilized in the control of tumour growth, besides surgery and chemotherapy. There is, however, little information concerning cellular response to the action of ionizing radiation in the target cells, i.e., cell lines originating from breast cancer. The present study proposed to analyze the radiosensitivity of the human tumorigenic (T-47D and MCF-7) and nontumorigenic (MCF-10) cell lines, originating from breast and submitted to various doses (0.5 to 30 Gy) of 60Co rays (0.72 - 1.50 Gy/min). For this purpose, DNA radioinduced damage, repair capacity and cell death were utilized as parameters of radiosensitivity by micronucleus, single cell gel electrophoresis (Comet assay) and cell viability techniques. The data obtained showed that tumorigenic cell lines were more radiosensitive than nontumorigenic breast cells in all assays here utilized. The T-47D cell line was presenting the highest amount of radioinduced damage, a more accelerated proliferation rate and a higher rate of cell death. The three cell lines presented a relatively efficient repair capacity, since one hour after the irradiation all of them showed a considerable reduction of radioinduced damage. The techniques employed showed to be secure, sensitive and reproducible, allowing to quantify and evaluate DNA damage, repair capacity and cell death in the three human breast cell lines.
160

Sistema de cocultura com as linhagens celulares humanas HepG2 e HUVEC na investigação da genotoxicidade de toxinas isoladas de Bothrops jararacussu / Co-culture system with the human cell lines HepG2 and HUVEC in the genotoxicity investigation of toxins isolated from Bothrops jararacussu

Machado, Ana Rita Thomazela 15 May 2017 (has links)
O carcinoma hepatocelular é um dos tipos de cânceres mais comuns em adultos com sua incidência aumentando mundialmente a cada ano. O tratamento curativo é o transplante de fígado, mas as muitas dificuldades encontradas para o procedimento faz com que a quimioterapia seja amplamente utilizada. Além disso, pode ocorrer quimiorresistência e muitos efeitos adversos, o que impulsiona a busca por novos compostos terapêuticos. L-aminoácido oxidases (LAAO) isoladas de peçonhas de serpentes têm demonstrado bons resultados de citotoxicidade em linhagens celulares tumorais, no entanto estes resultados representam sistemas in vitro em monocultura e estudos recentes demonstram que o microambiente tumoral tem um importante papel na transformação neoplásica, no crescimento e invasão do tumor e na resistência quimioterápica. Assim, avaliou-se uma LAAO purificada da peçonha de Bothrops jararacussu (BjussuLAAO-II) em células de carcinoma hepatocelular (HepG2) em monocultura e em cocultura com células endoteliais de veia umbilical humana (HUVEC) com o objetivo de simular o microambiente tumoral, onde, normalmente, é observado mais de um tipo celular. A atividade citotóxica foi avaliada por meio do ensaio do MTT e do ensaio de sobrevivência clonogênica, a atividade genotóxica por meio do ensaio do cometa, a produção de espécies reativas de oxigênio por meio de fluorescência e os danos ao cromossomo por meio do ensaio do micronúcleo. Em células HepG2, em monocultura, todas as concentrações testadas (0,25 - 5,00 ?g/mL) foram citotóxicas e aumentaram os níveis intracelulares de espécies reativas de oxigênio. Verificou-se dano genotóxico na concentração de 5,00 ?g/mL e não houve dano cromossômico. Quando cultivada em cocultura com células HUVEC, as concentrações de 1,00 e 5,00 ?g/mL de BjussuLAAO-II foram citotóxicas às células HepG2 e aumentaram os níveis de espécies reativas de oxigênio. A concentração de 5,00 ?g/mL induziu danos ao DNA e não houve danos aos cromossomos. Estes efeitos podem ser correlacionados ao aumento de espécies reativas de oxigênio intracelulares e as diferenças entre os resultados de mono e cocultura devido à simulação de parte do microambiente tumoral. Em monocultura de células HUVEC, todas as concentrações testadas foram citotóxicas, houve dano genotóxico nas concentrações de 1,00 e 5,00 ?g/mL e nenhuma concentração testada induziu danos cromossômicos. Como há elevada citotoxicidade, danos ao DNA e indução de efeitos pró-oxidantes em células HepG2, BjussuLAAO-II representa um composto promissor no desenvolvimento de novos fármacos antitumorais / Hepatocellular carcinoma is one of the most common types of cancers in adults whose incidence increases worldwide each year. Liver chirurgic and transplantation is the best choice of treatment, but the many difficulties encountered in the procedure cause chemotherapy to be widely used. In addition, chemo resistance and many adverse effects can occur, which improves the search for new therapeutic molecules. L-amino acid oxidases (LAAO) isolated from snake venoms have demonstrated good cytotoxicity results in tumor cell lines, however these results represent in vitro monoculture systems and recent studies have shown that the tumor microenvironment plays an important role in neoplastic transformation in tumor growth and invasion and chemotherapeutic resistance. A LAAO purified from Bothrops jararacussu venom (BjussuLAA-IIO) venom was evaluated in hepatocellular carcinoma (HepG2) cells in monoculture and co-culture with human umbilical vein endothelial cells (HUVEC) with the aim of simulating the tumor microenvironment, where more than one cell type is normally observed. Cytotoxic activity was assessed by the MTT assay and clonogenic survival assay, genotoxic activity by comet assay, reactive oxygen species production by fluorescence, and chromosome damage by the micronucleus assay. In HepG2 cells, in monoculture, all concentrations tested (0.25 - 5.00 ?g/mL) were cytotoxic and increased intracellular levels of reactive oxygen species. Genotoxic damage at the concentration of 5.00 ?g/mL was observed and there was no chromosomal damage. When cultured with HUVEC cells, concentrations of 1.00 and 5.00 ?g/mL of BjussuLAA-II were cytotoxic to HepG2 cells and increased levels of reactive oxygen species. The concentration of 5.00 ?g/mL induced DNA damage and there was no damage to the chromosomes. These effects can be correlated to the increase of intracellular reactive oxygen species and the differences between the mono and co-culture results due to the simulation of part of the tumor microenvironment. In HUVEC monoculture, all concentrations tested were cytotoxic, genotoxic damage at concentrations of 1.00 and 5.00 ?g/mL, and no concentration tested induced chromosome damage. As there is high cytotoxicity, DNA damage and induction of pro-oxidant effects in HepG2 cells, BjussuLAAO-II represents a promising compound in the development of novel antitumor drugs

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