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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
221

Étude et caractérisation de composés nitroso dérivés de l’adamantane

Chartier, Patrick 04 1900 (has links)
La cristallisation est un phénomène dans lequel les atomes ou molécules s’arrangent de manière hautement ordonnée. Il s’agit d’une des plus anciennes méthodes de purification. De plus, la structure cristalline d’un matériau influence ses propriétés. En métallurgie, par exemple, plusieurs opérations sont effectuées sur le métal, chacune affectant la structure cristalline et par le fait même les propriétés du matériau. Une compréhension des facteurs affectant la structure cristalline serait désirable en chimie des matériaux. Par exemple, dans le développement de matériaux poreux, la structure permettrait de moduler la quantité de vide dans un cristal et d’ajuster ainsi sa porosité. Prévoir l’organisation moléculaire est aussi désirable dans les panneaux solaires afin de bien positionner les composantes actives. Pour les polymères, le taux de cristallinité affecte directement les propriétés mécaniques telles que la densité et la dureté. La cristallisation se fait par étape. Au début, quelques particules commencent par se lier intermoléculairement de manière réversible. À ce moment de la cristallisation, la perte d’entropie contrebalance les bénéfices enthalpiques et le processus n’est pas favorisé thermodynamiquement. Une fois qu’un certain nombre de particules se sont lié, un noyau ou germe de nucléation est formé et à ce moment la cristallisation devient favorisée thermodynamiquement. Cette étape critique s’appelle la nucléation. La structure et la forme du noyau de nucléation servent de gabarit pour la construction subséquente du cristal. Après la germination vient la croissance épitaxiale. Comprendre l’étape de germination permet donc de moduler l’organisation moléculaire au tout début de la formation du cristal. Le projet présenté dans ce mémoire vise à examiner le phénomène de la nucléation à l’aide de molécules organiques conçues pour porter plusieurs groupements pouvant se lier réversiblement de manière covalente. Le nombre critique de molécules pour construire un noyau de cristallisation et la nature de leur association peuvent être étudiés. Le cœur organique choisi pour ces molécules est celui de l’adamantane car ses dérivés cristallisent bien en général et peuvent être fonctionnalisés facilement. Le groupement choisi pour pouvoir se lier réversiblement est le nitroso, qui s’associe pour générer des liaisons azodioxy. L’objectif du projet fut donc la synthèse et l’étude du comportement du mono-, di-, tri- et tétranitrosoadamantane. / Crystallization is a phenomenon in which atoms or molecules arrange themselves in a highly ordered fashion. It is one of the oldest methods of purification. In addition, the structure of a crystalline substance influences its properties. In metallurgy, for example, many operations are applied to metals in an effort to change the crystal structure and thus the properties of the material. Acquiring a full comprehension of the factors affecting crystallization is therefore a desirable goal in materials chemistry. In the area of porous solids, for example, modifying the structure can be used to modulate the amount of free space inside the solid. Similarly, controlling the molecular organization of the components of solar panels is needed to optimize performance. For polymers, the degree of crystallinity directly affects mechanical properties such as density and hardness. Molecular crystallization is a stepwise process. At the start, a few molecules associate reversibly. At this point, the loss of entropy counterbalances stabilizing enthalpic effects, and the process is not favored thermodynamically. Once a certain number of molecules have assembled, a seed or germ of nucleation is formed. It is at this moment that crystallization becomes spontaneous. This critical step is called nucleation. The structure and shape of the seed serves as a template for subsequent construction of the crystal. After the seed is formed, the crystal then undergoes epitaxial growth. Understanding the seeding step allows modulation of the crystal at the very beginning of its formation. The project described in the present Master’s thesis aims to study the phenomenon of nucleation using specially designed organic molecules. The idea is to use molecules comprising multiple groups that can associate reversibly by forming weak covalent bonds. The critical number of molecules needed to obtain a crystal nucleus and their manner of association can be studied. The organic core chosen is that of adamantane because its derivatives tend to crystallize well and functionalization is straightforward. The functional group chosen to favor strong but reversible association is nitroso, because nitroso compounds typically exist in equilibrium with azodioxy dimers. The objective of work summarized in the memoir is to synthesis, characterize, and examine the associative properties of mono-, di-, tri-, and tetranitrosoadamantane.
222

Deposition And Covalent Immobilization of Porphyrin And Maleimide On A Si(111) Surface

Lovrek, Kristina 17 July 2020 (has links)
Eine Studie zur kovalenten Immobilisierung einiger Porphyrinderivate und einer p-Maleimidophenyl-Spezies (p-MP) auf der Si(111)-Oberfläche wird vorgestellt. Hierbei lag der Schwerpunkt auf der Untersuchung des Einflusses von Reaktionsparametern auf die Abscheidung und die Qualität organischer Schichten. Die dünnen Schichten werden mittels nasschemischer Methoden abgeschieden. Die hergestellten Strukturen werden mit einer Vielzahl oberflächensensitiver Messtechniken wie der IR-Ellipsometrie, der XPS-, der SEIRA- und der IR-Reflexionsspektroskopie analysiert. Alle Abscheidungen in dieser Arbeit werden in situ durchgeführt, zusätzlich zu den ex situ Reaktionen, um das Verständnis der Filmwachstums- und Depositionsgeschwindigkeiten zu erhalten. Bei der Untersuchung der Porphyrin-Dünnschichten lag der Fokus auf den synthetische Bedingungen der Materialabscheidung. Die Lösungsreaktionen zeigen, dass die Reaktion mit dem voraktivierten Porphyrinderivat zu einer besseren Ausbeute führt als mit dem in situ aktivierten Porphyrin. Wenn diese Reaktion jedoch unter Verwendung des Schicht-für-Schicht-Abscheidungsprinzips auf die Oberfläche übertragen wird, findet die Reaktion mit den oberflächengebundenen Aminosilanmolekülen mit einer viel langsameren Geschwindigkeit statt als die gleiche Reaktion in Lösung. Es wird ein alternativer Syntheseansatz vorgeschlagen, bei dem das Produkt in Lösung hergestellt und dann auf dem oxidierten Si-Substrat abgeschieden wird. Eine weitere in situ-Studie zum p-MP-Elektropfropfen auf der H-terminierten Si(111)-Oberfläche liefert Details zur Dünnschichtbildung im monolagigen und im sub-monolagigen Bereich. Die spontane Pfropfung von p-MP wird ebenfalls in situ überwacht. Es wurde festgestellt, dass die Bildung einer Monoschicht während der stromlosen Abscheidung länger dauert als bei einer elektrochemischen Abscheidung. Als Alternative zum Radikalmechanismus wird ein kationischer Mechanismus vorgeschlagen. / A study on the covalent immobilization of a couple of porphyrin derivatives and a p-maleimidophenyl species (p-MP) on Si(111) surface is presented to investigate how do reaction parameters influence the deposition and the quality of organic layers. The thin films are deposited with “wet chemistry” methods. The prepared structures are analyzed with a variety of surface sensitive techniques, namely, IR ellipsometry, XPS, SEIRA, and IR reflection spectroscopy. All depositions in this work are conducted in situ, in addition to the ex situ reactions, to gain an understanding of the film growth and deposition rates. The study on porphyrin thin films focused on the synthetic conditions of material deposition. Solution reactions indicate that the reaction with the pre-activated porphyrin derivative leads to a better yield than with the in situ-activated porphyrin. However, when this reaction is transferred to the surface by using the layer-by-layer deposition approach, the reaction with the surface-bound aminosilanes molecules takes place at a much slower rate than the same reaction in solution. An alternative synthetic approach, where the product is prepared in solution and then deposited on the oxidized Si substrate, is proposed. A parallel in situ study on p-MP electrografting on the H-terminated Si(111) surface provides details on the thin film formation in a monolayer and a sub-monolayer regime. The spontaneous grafting of p-MP is also monitored in situ. It was found that the formation of a monolayer during the electroless deposition takes longer than an electrochemical deposition. A cationic mechanism is proposed as an alternative to a radical mechanism.
223

Decomposing compounds enables reconstruction of interaction fingerprints for structure‑based drug screening

Adasme, Melissa F., Bolz, Sarah Naomi, Al‑Fatlawi, Ali, Schroeder, Michael 22 January 2024 (has links)
Background: Structure-based drug repositioning has emerged as a promising alternative to conventional drug development. Regardless of the many success stories reported over the past years and the novel breakthroughs on the AI-based system AlphaFold for structure prediction, the availability of structural data for protein–drug complexes remains very limited. Whereas the chemical libraries contain millions of drug compounds, the vast majority of them do not have structures to crystallized targets,and it is, therefore, impossible to characterize their binding to targets from a structural view. However, the concept of building blocks offers a novel perspective on the structural problem. A drug compound is considered a complex of small chemical blocks or fragments, which confer the relevant properties to the drug and have a high proportion of functional groups involved in protein binding. Based on this, we propose a novel approach to expand the scope of structure-based repositioning approaches by transferring the structural knowledge from a fragment to a compound level. - Results: We fragmented over 100,000 compounds in the Protein Data Bank (PDB) and characterized the structural binding mode of 153,000 fragments to their crystallized targets. Using the fragment’s data, we were able to artificially reconstruct the binding mode of over 7,800 complexes between ChEMBL compounds and their known targets, for which no structural data is available. We proved that the conserved binding tendency of fragments, when binding to the same targets, highly influences the drug’s binding specificity and carries the key information to reconstruct full drugs binding mode. Furthermore, our approach was able to reconstruct multiple compound-target pairs at optimal thresholds and high similarity to the actual binding mode. - Conclusions: Such reconstructions are of great value and benefit structure-based drug repositioning since they automatically enlarge the technique’s scope and allow exploring the so far ‘unexplored compounds’ from a structural perspective. In general, the transfer of structural information is a promising technique that could be applied to any chemical library, to any compound that has no crystal structure available in PDB, and even to transfer any other feature that may be relevant for the drug discovery process and that due to data limitations is not yet fully available. In that sense, the results of this work document the full potential of structure-based screening even beyond PDB.
224

DNA Nanoparticles for Non-viral Gene Therapy: Mechanistic Studies and Targeting

Sun, Wenchao 26 June 2012 (has links)
No description available.
225

DEVELOPMENT OF CHEMICAL PROBES TO CBX CHROMODOMAIN USING DNA-ENCODED LIBRARIES AND COVALENT CONJUGATION WITH MANNICH ELECTROPHILES

Sijie Wang (13141959) 26 July 2022 (has links)
<p>Polycomb repressive complex 1 (PRC1) is critical for mediating gene expression during development. Five chromobox (CBX) homolog proteins, CBX2,4,6,7,8, are incorporated into PRC1 complexes, where they mediate targeting to trimethylated lysine 27 of histone H3 (H3K27me3) via the N-terminal chromodomain (ChD). Individual CBX paralogs have been implicated as drug targets in cancer; however, high similarity in sequence and structure among the CBX ChDs provide a major obstacle in developing selective CBX ChD inhibitors. Here a selection of small, focused, DNA-encoded libraries (DELs) against multiple homologous ChDs was reported to identify modifications to a parental ligand that confer both selectivity and potency for the ChD of CBX8. This on-DNA, medicinal chemistry approach enabled the development of SW2_110A, a selective, cell-permeable inhibitor of the CBX8 ChD. SW2_110A binds CBX8 ChD with a Kd of 800 nM, with minimal 5-fold selectivity for CBX8 ChD over all other CBX paralogs in vitro. SW2_110A specifically inhibits the association of CBX8 with chromatin in cells and inhibits the proliferation of THP1 leukemia cells driven by the MLL-AF9 translocation. In THP1 cells, SW2_110A treatment significantly decreases expression of MLL-AF9 target genes, including HOXA9, validating the previously established role for CBX8 in MLL-AF9 transcriptional activation, and defining the ChD as necessary for this function. The success of SW2_110A provides great promise for the development of highly selective and cell permeable probes for the full CBX family. In addition, the approach taken provides a proof-of-principle demonstration of how DELs can be used iteratively for optimization of both ligand potency and selectivity.</p> <p>CBX2 is upregulated in a variety of cancers, particularly in advanced prostate cancers. Using CBX2 inhibitors to understand and target CBX2 in prostate cancer is highly desirable. Here, selections of focused DNA encoded libraries (DELs) were performed for the discovery of a selective CBX2 chromodomain probe, SW2_152F. SW2_152F binds to CBX2 ChD with a Kd of 80 nM and displays 24-1000-fold selectivity for CBX2 ChD over other CBX paralogs <em>in vitro</em>. SW2_152F is cell permeable, selectively inhibits CBX2 chromatin binding in cells, and blocks neuroendocrine differentiation of prostate cancer cell lines in response to androgen deprivation.</p> <p>Targeted covalent inhibitors (TCIs) are rationally designed inhibitors that bind to a target protein and specifically label a non-conserved amino acid on proteins by means of reactive moieties (warheads). TCIs typically function by two steps, in which inhibitors first non-covalently bind to the target protein and then covalent bond formation occurs between the inhibitor- warhead and a proximal nucleophile on protein. Covalent inhibitors or drugs have prolonged target engagement and enhanced pharmacokinetic potency in vivo, compared to non-covalent molecules. Strategies to develop effective warheads of TCIs have been reported for labeling different nucleophilic amino acid residues, of which cysteine and lysine are the most established for covalent labeling. Tyrosine is recently becoming an attractive nucleophile for TCIs as an alternative choice, yet currently developed warheads that label tyrosine do so with modest specificity over other side chains. Here, I report the development of novel Mannich electrophiles and use those electrophiles as covalent warheads on an inhibitor to specifically target tyrosine in protein labeling. To my knowledge, this is first demonstration of the use of Mannich electrophiles in covalent inhibitors. Specifically, I leveraged a previously developed CBX8 chromodomain inhibitor to specifically label a non-conserved tyrosine within CBX8 using cyclic imine derivatives as warheads. This ligand-directed, specific tyrosine conjugation on CBX8 but not on CBX2, significantly improves both the potency and selectivity of inhibition. Biochemical, proteomic, and cellular validation further showed the cyclic imine covalent inhibitors can increase both potency and selectivity to the target protein CBX8 in cells, serving as a robust chemical probe for target function evaluation and modulation. This new type of tyrosine labeling warhead is a useful addition to the toolbox of medicinal chemists for covalent inhibitor development.</p> <p>The following chapters are modified from following publications, with permissions from Sijie Wang, Emily C.Dykhuizen, and Casey J. Krusemark. </p> <p>Wang, S., Denton, K. E., Hobbs, K. F., Weaver, T., McFarlane, J. M., Connelly, K. E., Gignac, M.C., Milosevich, N., Hof, F., Paci, I., Musselman, C. A., Dykhuizen, E.C., Krusemark, C. J. Optimization of Ligands Using Focused DNA-Encoded Libraries To Develop a Selective, Cell-Permeable CBX8 Chromodomain Inhibitor. <em>ACS Chem Biol. </em>2020, 15, 112-131</p> <p>Wang, S., Alpsoy, A., Sood, S., Ordonez-Rubiano, S. C., Dhiman, A., Sun, Y., Krusemark, C. J., Dykhuizen, E. C. A Potent, Selective CBX2 Chromodomain Ligand and its Cellular Activity During Prostate Cancer Neuroendocrine Differentiation. <em>ChemBioChem.</em> 2021, 22, 2335-2344</p> <p>Wang, S., Ordonez-Rubiano, S. C., Dhiman, A., Jiao G., Strohmier B. P., Krusemark, C. J., Dykhuizen, E. C. Polycomb Group proteins in cancer: multifaceted functions and strategies for modulation Modulators. <em>NAR Cancer</em>. 2021, 3, zcab039</p>
226

Physical and Biological Properties of Synthetic Polycations in Alginate Capsules

Kleinberger, Rachelle 04 1900 (has links)
The use of cell transplantation to treat enzyme deficiency disorders is limited by the immune response targeted against foreign tissue or the use of life-long immunosuppressants. Hiding cells from the immune system in an encapsulation device is promising. Cells encapsulated within an anionic calcium alginate hydrogel bead are protected through a semi-permeable membrane formed by polycation, poly-L-lysine (PLL). A final layer of alginate is added to hide the cationic PLL surface but this has proved to be difficult creating capsules which are prone to fibrotic overgrowth, blocking exchange of nutrients, waste and therapeutic enzymes through the capsule. For long term applications these capsules need to be both biocompatible and mechanically robust. This thesis aims to address the biocompatibility issue of high cationic surface charge by synthesizing polycations of reduced charge using N-(3- aminopropyl)methacrylamide hydrochloride (APM) and N-(2- hydroxypropyl)methacrylamide (HPM) and study the associated mechanical properties of the capsules using micropipette aspiration. Micropipette aspiration was applied and validated for alginate based capsules (gel and liquid core) to quantify stiffness. Varying ratios of APM were used to control the overall charge of the polycations formed while HPM was incorporated as a neutral, hydrophilic, nonfouling comonomer. The molecular weight (MW) was controlled by using reversible addition-fragmentation chain transfer (RAFT) polymerization. The biocompatibility of these polymers was tested by cell adhesion and proliferation of 3T3 fibroblasts onto APM/HPM copolymer functionalized surfaces and by solution toxicity against C2C12 myoblasts. The ability for the APM/HPM copolymers to bind to alginate and form capsules was also assessed, along with the integrity and stiffness of the capsule membrane with or without additional covalent cross-linking by reactive polyanion, poly(methacrylic acid-co-2-vinyl-4,4- dimethylazlactone) (PMV60). Thermo-responsive block copolymers of N-isopropylacrylamide (NIPAM) and 2- hydroxyethylacrylamide (HEA) were also synthesized as potential drug delivery nanoparticles, showing control over micelle morphology with varying NIPAM to HEA ratios. / Thesis / Doctor of Science (PhD) / The treatment of enzyme deficiency disorders by cell transplantation is limited by the immune attack of foreign tissue in absence of immunosuppressants. Cells protected in an encapsulation device has shown promise. Poly-L-lysine, a widely used membrane material in these protective capsules, binds to the anionic gel entrapping living cells because it is highly cationic. The high cationic charge is difficult to hide causing the immune system to build tissue around the capsule, preventing the encapsulated cells from exchanging nutrients and therapeutic enzymes. This thesis aims to replace poly-L-lysine by synthesizing a series of more biocompatible materials of decreasing cationic charge. These materials were studied for the ability to support tissue growth and form stable capsules. The membrane strength was measured using an aspiration method validated for these types of capsules. Reducing the cationic charge of the materials increased the biocompatibility of the capsule membrane but also made for weaker membranes.
227

Synthesis and Characterization of Cation-Containing and Hydrogen Bonding Supramolecular Polymers

Cheng, Shijing 13 October 2011 (has links)
Non-covalent interactions including nucleobase hydrogen bonding and phosphonium/ammonium ionic aggregation were studied in block and random polymers synthesized using controlled radical polymerization techniques such as nitroxide mediated polymerization (NMP) and reversible addition-fragmentation chain transfer polymerization (RAFT). Non-covalent interactions were expected to increase the effective molecular weight of the polymeric precursors through intermolecular associations and to induce microphase separation. The influence of non-covalent association on the structure/property relationships of these materials were studied in terms of physical properties (tensile, DMA, rheology) as well as morphological studies (AFM, SAXS). Ionic interactions, which possess stronger interaction energies than hydrogen bonds (~150 kJ/mol) were studied in the context of phosphonium-containing acrylate triblock (ABA) copolymers and random copolymers. Phosphonium-containing ionic liquid monomers with different alkyl substituent lengths and counterions enabled an investigation of the effects of ionic aggregation of phosphonium cations on the polymer physical properties. The polymerization of styrenic phosphonium-containing ionic liquid monomers using a difunctional alkoxyamine initiator, DEPN2, afforded an ABA triblock copolymer with an n-butyl acrylate soft center block and symmetric phosphonium-containing external reinforcing blocks. Small-angle X-ray scattering (SAXS) and transmission electron microscopy (TEM) of triblock copolymers revealed pronounced microphase separation at the nanoscale. Phosphonium aggregation governed block copolymer flow activation energies. In random copolymers, the phosphonium cations only weakly aggregated, which strongly depended on the length of alkyl substituents and the type of counterions. Acrylate random copolymers consisting of quaternary ammonium functionalities were synthesized using reversible addition-fragmentation chain transfer polymerization (RAFT). The obtained copolymers possessed controlled compositions and narrow molecular weight distributions with molecular weights ranging from Mn =50,000 to 170,000 g/mol. DMA evidenced the weak aggregation of ammonium cations in the solid state. Additionally, this ionomer was salt-responsive in NaCl aqueous solutions. Hydrogen bonding, a dynamic interaction with intermediate enthalpies (10-40 kJ/mol) was introduced through complementary heterocyclic DNA nucleobases such as adenine, thymine and uracil. Our investigations in this field have focused on the use of DNA nucleobase pair interactions to control polymer self-assembly and rheological behavior. Novel acrylic adenine- and thymine-containing monomers were synthesized from aza-Michael addition reaction. The long alkyl spacers between nucleobase and polymer backbone afforded structural flexibility in self-assembly process. Adenine-containing polyacrylates exhibited unique morphologies due to adenine-adenine π-π interactions. The complementary hydrogen bonding of adenine and thymine resulted in disruption of adenine-adenine π-π interactions, leading to lower plateau modulus and lower softening temperatures. Moreover, hydrogen bonding interactions enabled the compatibilization of complementary hydrogen bonding guest molecules such as uracil phosphonium chloride. / Ph. D.
228

Synthesis of Vinylene-Linked Two-Dimensional Conjugated Polymers via the Horner–Wadsworth–Emmons Reaction

Pastoetter, Dominik L., Xu, Shunqi, Borrelli, Mino, Addicoat, Matthew, Biswal, Bishnu P., Paasch, Silvia, Dianat, Arezoo, Thomas, Heidi, Berger, Reinhard, Reineke, Sebastian, Brunner, Eike, Cuniberti, Gianaurelio, Richter, Marcus, Feng, Xinliang 21 May 2024 (has links)
In this work, we demonstrate the first synthesis of vinylene-linked 2D CPs, namely, 2D poly(phenylenequinoxalinevinylene)s 2D-PPQV1 and 2D-PPQV2, via the Horner–Wadsworth–Emmons (HWE) reaction of C2-symmetric 1,4-bis(diethylphosphonomethyl)benzene or 4,4′-bis(diethylphosphonomethyl)biphenyl with C3-symmetric 2,3,8,9,14,15-hexa(4-formylphenyl)diquinoxalino[2,3-a:2′,3′-c]phenazine as monomers. Density functional theory (DFT) simulations unveil the crucial role of the initial reversible C−C single bond formation for the synthesis of crystalline 2D CPs. Powder X-ray diffraction (PXRD) studies and nitrogen adsorption-desorption measurements demonstrate the formation of proclaimed crystalline, dual-pore structures with surface areas of up to 440 m2 g−1. More importantly, the optoelectronic properties of the obtained 2D-PPQV1 (Eg=2.2 eV) and 2D-PPQV2 (Eg=2.2 eV) are compared with those of cyano-vinylene-linked 2D-CN-PPQV1 (Eg=2.4 eV) produced by the Knoevenagel reaction and imine-linked 2D COF analog (2D-C=N-PPQV1, Eg=2.3 eV), unambiguously proving the superior conjugation of the vinylene-linked 2D CPs using the HWE reaction.
229

<b>Targeting Protein Tyrosine Phosphatases with Small Molecules as a Novel Cancer Immunotherapy</b>

Zihan Qu (18990101) 09 July 2024 (has links)
<p dir="ltr">In this study, we presented the discovery of the first-in-class covalent inhibitor specific to Src homology 2 domain containing phosphatase 1 (SHP1), an overlooked cancer immunotherapy target. Through high-throughput screening, we identified a chloroacetamide fragment highly selective for SHP1. This fragment was subsequently refined to yield M029, a covalent inhibitor characterized by low-micromolar potency, heightened selectivity, enhanced stability, and improved bioavailability. Notably, M029 targets a cryptic, non-conserved cysteine residue on SHP1, thereby illuminating novel avenues for future drug development focused on SHP1. This presented study also marked the first characterization of SHP1 pharmacology inhibition <i>in vivo</i> using M029 as a tool compound. Consistent to previous genetic studies, SHP1 inhibition was observed to markedly bolster anti-tumor efficacy, primarily through the activation of CD8+ T cells and NK cells, coupled with a reduction in T cell exhaustion. While no synergistic effects were noted in conjunction with anti-PD-1 treatment, M029 as a standalone therapy showcased more favorable responses compared to anti-PD-1 therapy alone, underscoring its potential for clinical application.</p><p dir="ltr">Meanwhile, we also demonstrated the effects of targeting both protein tyrosine phosphatase 1B (PTP1B), and T cell protein tyrosine phosphatase (TC-PTP) using proteolysis targeting chimeras (PROTACs). PROTACs are heterobifunctional small molecules comprising a targeted protein ligand, an E3 ligase ligand, and a linker. By recruiting an E3 ligase to the targeted proteins, PROTACs leverages the cell's ubiquitin-proteasome machinery to achieve selective target protein degradation. In contrast to traditional occupancy-based inhibitors, event-driven PROTACs show improved efficacy by promoting target protein degradation in a catalytic mode of action and greater selectivity through the obligatory formation of the target-PROTAC-E3 ternary complex, which is essential for efficient target degradation. Through optimizing the previously reported PROTAC DU-14, we acquired a cereblon (CRBN)-based PTP1B/TC-PTP dual targeting PROTAC X1 of higher bioavailability than DU-14. X1 showed enhanced efficacy than DU-14 in multiple cell lines and manifested anti-cancer efficacy <i>in vivo</i>. Additionally, employing X1 as a tool compound, we validated the anti-cancer potential of PTP1B/TC-PTP degradation in STAT3 dependent malignancies, such as non-Hodgkin’s lymphomas. Treatments with X1 or DU-14 effectively induced tumor cell apoptosis, whereas the dual inhibitor ABBV-CLS-484 failed to produce comparable outcomes.</p>
230

Modélisation au sein de la DFT des propriétés des structures électronique et magnétique et de liaison chimique des Hydrures d’Intermétalliques / DFT modeling of the electronic and magnetic structures and chemical bonding properties of intermetallic hydrides

Al Alam, Adel F. 26 June 2009 (has links)
Cette thèse présente une étude modélisatrice de différentes familles d'intermétalliques et de leurs hydrures qui présentent un intérêt à la fois fondamental et appliqué. Deux méthodes complémentaires construites au sein de la théorie de la fonctionnelle densité (DFT) ont été choisies : d'une part celle à base de pseudo potentiels (VASP) pour l'optimisation géométrique, la recherche structurale et la cartographie de localisation électronique (ELF), d'autre part celle de type "tous-électrons" (ASW), pour une description détaillée de la structure électronique, des propriétés de liaison chimique suivant différents schémas et des quantités impliquant les électrons de c\oe ur comme le champ hyperfin. Un accent particulier est mis sur les rôles compétitifs des effets magnétovolumiques par rapport à ceux chimiques (liaison métal-H) dans les phases hydrurées, binaires de Laves (ex. ScFe2) et de Haucke (ex. LaNi5) et ternaires à base de cérium (ex. CeRhSn) et d'uranium (ex. U2Ni2Sn). / This thesis presents an ab initio study of several classes of intermetallics and their hydrides. These compounds are interesting from both a fundamental and an applied points of view. To achieve this aim two complementary methods, constructed within the DFT, were chosen : (i) pseudo potential based VASP for geometry optimization, structural investigations and electron localization mapping (ELF), and (ii) all-electrons ASW method for a detailed description of the electronic structure, chemical bonding properties following different schemes as well as quantities depending on core electrons such as the hyperfine field. A special interest is given with respect to the interplay between magnetovolume and chemical interactions (metal-H) effects within the following hydrided systems : binary Laves (e.g. ScFe2) and Haucke (e.g. LaNi5) phases on one hand, and ternary cerium based (e.g. CeRhSn) and uranium based (e.g. U2Ni2Sn) alloys on the other hand.

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