Es wird angenommen, dass das Influenzavirus-Glykoprotein Hämagglutinin (HA) für seine Funktion sowohl bei der Virusfreisetzung als auch bei der Fusion von viraler und zellulärer Membran mit Cholesterin- und Sphingolipidreichen Domänen, sogenannten Membran-Rafts, assoziiert sein muss. Aus diesem Grund sollte in dieser Arbeit die Membran-Raft-Affinität von HA in lebenden Zellen mittels FLIM-FRET gemessen werden. Dabei wurde mit Hilfe der Fluroreszenz-Lebenszeit-Messung (FLIM) der Förster-Resonanz-Energie-Transfer (FRET) von fluoreszenzmarkiertem HA auf einen etablierten Raft-Marker bestimmt. Diese Messungen zeigten, dass beide Proteine in gemeinsamen Klustern in der Plasmamembran vorkommen. Durch Cholesterinentzug und durch den Einsatz von Cytochalasin D, welches die Mikrofilamente zerstört, konnte diese Klusterbildung reduziert werden. Demnach tragen sowohl die Membran-Rafts als auch das Aktinnetzwerk zu dieser Klusterbildung bei. Mittels FLIM-FRET konnte zusätzlich bestätigt werden, dass die Signale für die Detergenslöslichkeit von HA in Triton-Extraktionsexperimenten, die Palmitylierung und die stark hydrophoben Aminosäuren zu Beginn der Transmembrandomäne (TMD), auch im lebenden System eine wichtige Rolle spielen. Zusätzlich konnten biochemische Experimente zeigen, dass die hydrophoben Aminosäuren zu Beginn der HA-TMD den intrazellulären Transport, nach der Trimerbildung, entscheidend verzögern. Diese Verzögerung ist vermutlich auf einer erschwerten Integration dieser Proteine in die Membran-Rafts begründet. Die virale Fusion mit der Wirtszellmembran wird durch eine pH5-Behandlung vermittelte Konformationsänderung von HA ausgelöst. FLIM-FRET-Messungen zeigten für die pH5-Konformation von HA eine verglichen mit der pH7-Konformation verringerte Klusterbildung mit dem Raft-Marker. Somit ist offensichtlich, dass die Membranfusion-vermittelnde HA-Konformation eine verringerte Raft-Affinität besitzt. Diese verringerte Raft-Affinität könnte eine wichtige Rolle bei der Störung der Lipide an der Fusionsstelle spielen und somit die Bildung und/oder Vergrößerung der Fusionspore erleichtern. / It has been supposed that the hemagglutinin (HA) of influenza virus is recruited to cholesterol- and sphingolipid-enriched domains, also named membrane-rafts, to accomplish its function in virus budding and membrane fusion. This study aimed at verifying the affinity of HA for membrane-rafts in living cells using fluorescence-lifetime imaging microscopy to measure Förster’s resonance energy transfer (FLIM-FRET). FLIM-FRET revealed strong clustering between a fluorescence-tagged HA-protein and a well-established raft-marker in CHO cells. Clustering was significantly reduced when rafts were disintegrated by cholesterol depletion and when microfilaments were disrupted with cytochalasin D. Thus, membrane-rafts as well as the actin meshwork contribute synergistically to clustering. Clustering was also reduced by the removal of the known signals for the association of HA with detergent-resistant-membranes, the palmitoylation and the first amino acids in the transmembrane region (TMR). Since these mutations are obviously important for the raft-association of HA their function during the transport through the ER and the Golgi-complex was studied. These investigations showed that the exchange of the first three amino acids of the HA-TMR led to a decelerated transport after trimer-formation of the protein, probably due to retarded integration of these proteins into membrane-raft domains. Mediating viral fusion with the host cell membrane requires an irreversible conformational change of HA. FLIM-FRET studies of this low pH conformation unveiled that the clustering with the raft-marker is decisively reduced compared to the pre-fusion conformation of the protein. It might be assumed that the fusion-mediating conformation of HA reduces the proteins affinity for membrane-rafts. Therefore it is likely that this reduced affinity for rafts after the conformational change is relevant to cause perturbation of lipids at the fusion site and thereby facilitating the formation and/or enlargement of the fusion pore.

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior / O camu-camuzeiro (Myrciaria dubia (Kunth) Mc Vaugh) é uma espécie frutífera pertencente à família Myrtaceae. Possui potencial econômico, por se tratar do fruto com maior quantidade de vitamina C, chegando a atingir 6.112 mg de ácido ascórbico por 100 g-1 de polpa. Objetivou-se com o presente trabalho caracterizar os frutos de camu-camu detectando-se o melhor ponto de colheita para o fruto, assim como testar tecnologias pós-colheita e de armazenamento em sua conservação. Foram realizados dois experimentos. O primeiro, objetivou a determinação do ponto de colheita onde os frutos foram colhidos em três diferentes estádios de maturação (imaturo, semi-maturo e maturo) e armazenados por oito dias. No segundo, foram testadas embalagens e temperaturas de armazenamento constituindo os seguintes tratamentos: T1 (sem embalagem a temperatura ambiente, 22 C); T2 (sem embalagem a 15 C); T3 (sem embalagem a 20 C); T4 (PET a temperatura ambiente, 22 C); T5 (PET a 15 C); T6 (PET a 20 C); T7 (PVC a temperatura ambiente, 22 C); T8 (PVC a 15 C); e T9 (PVC a 20 C). Os delineamentos utilizados foram inteiramente casualizados em arranjo fatorial. Os frutos foram analisados diariamente quanto a: perda de massa fresca, pH, teores de sólidos solúveis (SS), acidez titulável (AT), ácido ascórbico (AA), vitamina C total, carotenoides, antocianinas, clorofilas A e B, flavonoides e compostos fenólicos totais, assim como a atividade antioxidante (FRAP e DPPH) e o índice de maturação (SS/AT). No estádio semi-maturo houve uma maior conservação dos atributos de qualidade (SS, AT e menor perda de massa), assim como do teor de ácido ascórbico e da atividade antioxidante (FRAP). Os pigmentos carotenoides, flavonoides e antocianinas, assim como o teor de vitamina C apresentaram maiores conteúdos nos frutos colhidos maturos, sendo esse estádio considerado o indicado para a extração desses biocompostos funcionais. Esse ponto de colheita também correspondeu ao maior conteúdo médio de fenólicos totais e da atividade antioxidante (DPPH). Assim o melhor ponto de colheita para a extração de pigmentos e biocompostos antioxidantes do camu-camu é o estádio maturo. Quando a intenção for obter maior vida de prateleira, o melhor ponto de colheita é o semimaturo, por conservar os atributos qualitativos por mais tempo. No armazenamento pós-colheita do camu-camu concluiu-se que a melhor conservação dos atributos qualitativos e a melhor conservação dos pigmentos e biocompostos antioxidantes ocorreu quando os frutos foram armazenados a 15 C em conjunto com a bandeja de poliestireno expandido recoberta com filme de PVC. / The camu-camu tree (Myrciaria dubia (Kunth) Mc Vaugh) is fruit-bearing tree belonging to the family Myrtaceae. It possesses economic potential for being concerned with the fruit of greatest amount of vitamin C, coming to reach 6.112 mg of ascorbic acid per 100 g-1 of pulp. It was aimed through the present wok to characterize the camu-camu fruit by detecting the best harvest date for the fruit as well as to test post-harvest and storage technologies in their conservation. Two experiments were conducted. The first one aimed at the determination of the harvest date where the fruits were collected at three different ripening stages (unripe, semiripe and ripe) and stored for eight days. In the second one, packages and storage temperatures constituting the following treatments were tested: T1 (with no package at room temperature, 22 C); T2 (with no package at 15 C); T3 (with no package at 20 C); T4 (PET at room temperature, 22 C); T5 (PET at 15 C); T6 (PET at 20 C); T7 (PVC at room temperature, 22 C); T8 (PVC at 15 C); and T9 (PVC at 20 C). The designs utilized were completely randomized in factorial arrangement. The fruit were analyzed daily as to: the loss of fresh mass, pH, contents of soluble solids (SS), titrable acidity (TA), ascorbic acid (AA), total vitamin C, carotenoids, anthocyanins, chlorophylls A e B, flavonoids and total phenolic compounds as well as the antioxidant activity (FRAP and DPPH) and the maturation index (SS/TA). At the semiripe stage, there was a greater conservation of the quality attributes (SS, TA and less mass loss) as well as of the ascorbic acid content and of the antioxidant activity (FRAP). The pigments carotenoides, flavonoids and anthocyanins as well as the content of vitamin C presented higher amounts in the fruit collected matures; that stage being regarded as the appropriate for the extraction of those functional biocompounds. That harvest date also corresponded to the highest average content of total phenolics and of the antioxidant activity (DPPH). So, the best harvest date for the extraction of both pigments and antioxidant biocompounds of camu-camu is the ripe stage. When the intention is obtaining longest shelf-life, the best harvest date is the semi-ripe, for conserving the qualitative attributes for longer. In the post-harvest storage of the camu-camu, it follows that the best conservation of the qualitative attributes and the best conservation of the pigments and antioxidant biocompounds occurred when the fruit were stored at 15 C jointly with the expanded polystyrene tray covered with PVC film.

Les bactéries forment des communautés spatiales adhérentes à des surfaces, appelées biofilms. Ces organisations bactériennes sont omniprésentes dans les milieux naturel, industriel et médical et peuvent porter atteinte à notre santé lorsqu’elles hébergent des agents pathogènes, parmi lesquels le médiatique Staphylococcus aureus sur lequel a porté l’ensemble de ce travail de thèse. Cette bactérie est l’une des principales causes d’infections chroniques, mais également d’infections nosocomiales, impliquant le plus souvent des biofilms. Il est aujourd’hui reconnu qu’une telle biostructure est un véritable bouclier à l’action des antimicrobiens et à celle du système immunitaire. Outre les résistances génétiques des bactéries pathogènes aux antibiotiques, l’hétérogénéité chimique et biologique de la structure tridimensionnelle des biofilms pourrait être à l’origine de ces phénomènes de tolérance et de chronicité d’infections. C’est à cette problématique que se rattache ce travail de thèse concernant l’action de la vancomycine sur des biofilms de S. aureus. Alors que les connaissances sur la réactivité de cet antibiotique clef avec S. aureus proviennent essentiellement d’études réalisées sur des cellules planctoniques, l’originalité de notre approche a été d’étudier la diffusion-réaction de la vancomycine in situ dans l’épaisseur des biofilms en utilisant en particulier des outils avancés de microscopie de fluorescence (Time-Lapse, FLIM, FRAP, et FCS). Nous avons ainsi évalué sa biodisponibilité dans la matrice d’exopolymères, ainsi que l’impact de la physiologie spécifique des bactéries incluses en biofilms sur l’activité de cet antibiotique, utilisé seul ou en association avec la rifampicine. Cette approche multidisciplinaire a permis une meilleure compréhension des mécanismes impliqués dans la singulière tolérance de ces biostructures à l’action des antibiotiques, et de souligner l’urgence de développer des approches préventives telles que le diagnostic précoce des infections impliquant des biofilms. / Bacteria form architecturally complex communities adherent to surfaces, known as biofilms. These structured living cells are ubiquitous and found in natural, industrial and medical environments. They can affect our health when they host pathogens as the well known Staphylococcus aureus species which constitute the main purpose of this thesis. This bacteria is one of the major causes of chronic and nosocomial infections, most often involving biofilms. It is now recognized that such biostructure is a true shield against the action of antimicrobial agents and the host immune system. In addition to the genetic resistance of pathogenic bacteria to antibiotics, the chemical and biological heterogeneity of biofilms could be the cause of these phenomena of tolerance and apparition of chronic infections. This work aimed at studying of the action of vancomycin on S. aureus biofilms. While the knowledge on the reactivity of this key antibiotic with S. aureus bacteria comes mainly from studies of planktonic cells, the originality of our approach was to study the diffusion-reaction processes of vancomycin in situ in the thickness of biofilms using particularly advanced fluorescence imaging tools (Time-Lapse, FLIM, FRAP and FCS). We thus assess its bioavailability in the exopolymeric matrix, and the impact of the cell physiology of bacteria included in biofilms on the activity of this antibiotic when used alone or in combination with rifampicin. This multidisciplinary approach has allowed a better understanding of the mechanisms involved in the particular tolerance of these biostructures to the action of antibiotics, and underlines the emergency to develop preventive approaches such as early diagnosis of infections involving biofilms.

Compartmentalization of cell membranes, in particular of the apical membrane of columnar epithelia, is the topic of this thesis. The first part characterizes the apical membrane and its specialized organization and morphology, whereas the second part focuses on the formation of this unique plasma membrane domain during epithelial polarization. The apical membrane of columnar epithelia is enriched in glycosphingolipids, a class of lipids that are known to interact with cholesterol to form liquid ordered domains, also termed "rafts", in cell membranes. Imaging the apical surface of untreated and raft lipid depleted MDCK cells with atomic force microscopy revealed that raft lipids are involved in the formation and/or maintenance of microvilli, actin based protrusions of the apical plasma membrane, indicating a regulatory link between membrane domains and the cytoskeleton. Furthermore, antibody patching and photobleaching experiments performed during the work of this thesis suggest that the organization into raft and non-raft domains is very different in the apical membrane of MDCK cells compared to the plasma membrane of a fibroblast. In fact, the data support the hypothesis that the apical membrane could be a percolating raft membrane in which rafts constitute the major phase and non-raft domains exist as isolated entities. The second part of this thesis analyses the segregation of apical and basolateral membrane domains during epithelial polarization. This segregation can either be achieved by generating scaffolded domains prior to junction formation or by polarized secretory and endocytic membrane traffic after the establishment of cell junctions. While most apical and basolateral marker proteins in MDCK cells follow the latter mechanism, this thesis reports that the apical marker gp135 is confined to the dorsal face already in single attached cells. The unknown antigen was purified and identified as podocalyxin. Analysis of a series of domain mutants revealed that the C-terminal PDZ-binding motif of podocalyxin is mainly responsible for its special localization, which it shares with the PDZ protein NHERF-2. Knocking down podocalyxin by RNA interference resulted in retardation of cell growth and epithelial polarization. Taken together, the data suggest that podocalyxin and NHERF-2 could be part of an early apical polarity scaffolding system based on PDZ-binding and PDZ-containing proteins.

Les membranes biologiques, qui compartimentent les différents éléments du vivant, jouent un rôle essentiel dans les processus biologiques comme la signalisation, le transport, la transmission du message nerveux, etc. Envisagées comme des fluides à deux dimensions, l’étude de leurs propriétés physiques peut nous aider à comprendre certains mécanismes biologiques. Ce travail de thèse s’est intéressé à la mobilité des molécules au sein des membranes, et notamment à deux paramètres essentiels, la viscosité membranaire, et la diffusion latérale. Après avoir optimisé la technique de recouvrement de fluorescence après photoblanchiment (FRAP) au microscope confocal, nous avons étudié la mobilité des molécules au sein de deux types de membranes modèles in vitro : la phase éponge d’un surfactant non-ionique (C12E5) et les vésicules géantes unilamellaires (GUVs) lipidiques. 1) La phase éponge (ou L3) : après avoir déterminé son diagramme de phase et montré que les protéines membranaires restent actives dans cette phase, nous avons mesuré la mobilité de protéines par recouvrement de fluorescence après photoblanchiment sur un motif à franges (FRAPP). Cela nous a permis d’obtenir les constantes d’association de protéines de la pompe d’efflux OprM-MexAB, impliquée dans la résistance aux antibiotiques de la bactérie Pseudomonas aeruginosa. Ces interactions dépendent très fortement du degré de confinement de chacune des protéines. 2) Les GUVs : après avoir développé une méthode simple de formation des GUVs, au sein desquelles les protéines membranaires restent actives, nous avons mesuré la diffusion des lipides par FRAP, et montré que dans certaines conditions, ils se déplacent en groupe, ce qui permet d’expliquer la diversité des résultats de la littérature. En mesurant la viscosité membranaire par imagerie microscopique du temps de vie de fluorescence (FLIM), nous avons également montré qu’elle ne se déduit pas nécessairement des modèles hydrodynamiques de diffusion. / Biological membranes, which divide the elements of life, are a key factor in biological processes such as signaling, transport, transmission of an nerve impulse, etc. Seen as two-dimensional fluids, the study of their physical properties could help us understand some unsolved biological mechanisms. This work focused on molecule mobility within membranes, and specifically on two essential parameters: membrane viscosity and lateral diffusion. After optimizing the Fluorescence Recovery After Photobleaching (FRAP) technique on confocal microscopes, we studied the mobility of molecules within two types of in vitro model membranes: the sponge phase made of a non-ionic surfactant (C12E5) and the giant unilamellar lipidic vesicles (GUVs). 1) Sponge phase (or L3) : after having established its phase diagram and shown that membrane proteins stay active in this phase, we measured protein mobility by Fluorescence Recovery After fringe Pattern Photobleaching (FRAPP). This allowed us to obtain the association constants of the proteins of the efflux pump OprM-MexAB involved in the resistance to antibiotics of the bacteria Pseudomonas aeruginosa. These interactions heavily depend on the degree of confinement of each protein. 2) GUVs : after having developed a simple method for the formation of GUVs, in which membrane proteins stay active, we measured the lipid diffusion by FRAP. We showed that, under certain conditions, they can move together, which explains the diversity of results in the literature. By measuring membrane viscosity by Fluorescence Lifetime Imaging Microscopy (FLIM), we also showed that viscosity should not be necessarily deduced from hydrodynamic diffusion models.

Compartmentalization of cell membranes, in particular of the apical membrane of columnar epithelia, is the topic of this thesis. The first part characterizes the apical membrane and its specialized organization and morphology, whereas the second part focuses on the formation of this unique plasma membrane domain during epithelial polarization. The apical membrane of columnar epithelia is enriched in glycosphingolipids, a class of lipids that are known to interact with cholesterol to form liquid ordered domains, also termed "rafts", in cell membranes. Imaging the apical surface of untreated and raft lipid depleted MDCK cells with atomic force microscopy revealed that raft lipids are involved in the formation and/or maintenance of microvilli, actin based protrusions of the apical plasma membrane, indicating a regulatory link between membrane domains and the cytoskeleton. Furthermore, antibody patching and photobleaching experiments performed during the work of this thesis suggest that the organization into raft and non-raft domains is very different in the apical membrane of MDCK cells compared to the plasma membrane of a fibroblast. In fact, the data support the hypothesis that the apical membrane could be a percolating raft membrane in which rafts constitute the major phase and non-raft domains exist as isolated entities. The second part of this thesis analyses the segregation of apical and basolateral membrane domains during epithelial polarization. This segregation can either be achieved by generating scaffolded domains prior to junction formation or by polarized secretory and endocytic membrane traffic after the establishment of cell junctions. While most apical and basolateral marker proteins in MDCK cells follow the latter mechanism, this thesis reports that the apical marker gp135 is confined to the dorsal face already in single attached cells. The unknown antigen was purified and identified as podocalyxin. Analysis of a series of domain mutants revealed that the C-terminal PDZ-binding motif of podocalyxin is mainly responsible for its special localization, which it shares with the PDZ protein NHERF-2. Knocking down podocalyxin by RNA interference resulted in retardation of cell growth and epithelial polarization. Taken together, the data suggest that podocalyxin and NHERF-2 could be part of an early apical polarity scaffolding system based on PDZ-binding and PDZ-containing proteins.

Condensine sind essentiell für die Faltung von Chromatin und wurden auch mit der Transkriptionsregulation in Verbindung gebracht. Der zugrunde liegende Mechanismus für die Transkriptionsregulation ist jedoch unklar. Condensin DC in C. elegans ist ein gutes Modell zur Erforschung der Transkriptionsregulation durch Condensine, da es spezifisch für die Dosiskompensation der Gene auf dem X Chromosom benutzt wird. Condensin DC bindet an beide X Chromosome in C. elegans Hermaphroditen und reduziert deren Transkription um die Hälfte. In meiner Dissertation habe ich untersucht, welche Rolle ein dynamisches Binden von Condensin DC an Chromatin spielt und wie dies die Transkription während der Embryogenese reguliert. Condensine binden dynamisch an Chromatin, um es zu komprimieren und durch Bildung von Schlaufen die Transkription zu regulieren. Mit Hilfe von „fluorescence recovery after photobleaching“ (FRAP) habe ich in adulten Darmzellen von C. elegans untersucht, welche Faktoren das dynamische Binden von Condensin DC an die X Chromosomen beeinflussen. Meine Daten zeigen, dass sowohl die ATPase-Domäne von Condensin DC, als auch eine nicht-katalytische Aktivität einer Histon-Demethylase die Bindedynamik von Condensin DC beeinflussen und damit Transkription regulieren. Zusätzlich habe ich mit einem Mikroskopieansatz, der auf dem Nachweis von einzelnen RNA Molekülen beruht (smFISH), die Transkription von mehreren Genen untersucht, die durch Condensin DC während der Embryonalentwicklung reguliert werden. Die aus diesen Daten ermittelten Transkriptionskinetiken deuten darauf hin, dass Condensin DC vorrangig die Häufigkeit der Transkriptionsinitiation reguliert. Zusammenfassend liefert meine Forschung neue Einblicke in die Transkriptionsregulation durch Condensine und kann als Basis für detailliertere, mechanistische Studien der Rolle von Condensinen in der Transkriptionsregulation in C. elegans und auch in anderen Organismen dienen. / Condensins are essential for chromosome compaction and have been implicated in transcription regulation. The mechanistic foundation of this regulatory function is poorly understood. A clear paradigm to address this question is the X-specific condensin DC in C. elegans, which specifically binds to and transcriptionally represses X chromosomes in XX hermaphrodites by 2-fold. In my thesis, I studied condensin DC binding dynamics to the X chromosome and how condensin DC affects transcription kinetics in single embryos. The binding of condensins to chromatin has been described in recent microscopy-based studies as dynamic in processes including loop formation, chromatin compaction and transcription regulation. To study the dynamics of condensin DC binding, I established fluorescence recovery after photobleaching (FRAP) in C. elegans adult intestinal cells. With this method, I studied how the ATPase domain and different histone modifiers regulate the dynamic binding of condensin DC. I found that the ATPase domain is critical for binding of the complex and that the noncatalytic activity of a histone demethylase increases the dynamics of condensin DC binding, which is crucial for its role in transcription regulation. To further study the mechanism of condensin DC in transcription regulation, I used an imaging approach based on widefield single-molecule RNA fluorescence in situ hybridization (smFISH). I obtained thousands of smFISH images for a set of condensin DC-regulated genes and extracted mature and nascent RNA counts in 3D, which I used to determine transcription burst characteristics throughout embryonic development. My data show that condensin DC regulates the frequency of transcription initiation to down-regulate X-chromosomal genes. Taken together, my results provide new insight into condensin-mediated transcription regulation, which can be used to inform future studies on the mechanism of condensins in transcription regulation in C. elegans and other organisms.

It would be beneficial to incorporate transmembrane proteins (TMPs) into biosensors, because TMPs are important for cell function in healthy and diseased states. These devices would employ an artificial cell membrane to maintain TMP function since cell membranes, which are mostly lipids, are necessary for the TMPs to function. These artificial lipid membranes must be robust for sensor applications. The ruggedness of these artificial membranes can be increased by using polymerizable lipids. Some polymerized lipid membranes exhibit increased stability, while successfully incorporating TMPs.Some polymerized membranes do not support the activity of certain TMPs, while maintaining the function of others. It is believed the physical properties of the membranes are important for TMP function. Some important physical properties of polymerizable lipid membranes have not yet been measured. Here, fluidity and mechanical properties of polymerizable dienoylPC lipid membranes were investigated.Fluorescence Recovery After Photobleaching was used to measure the fluidity of polymerizable dienoylPC membranes. Unpolymerized, UV-polymerized, and redox-polymerized membranes were investigated. Three types of membranes were found: fluid, partially fluid, and immobile. Unpolymerized and some polymerized membranes were fluid, while only polymerized membranes were partially fluid or immobile. Polymer size is believed to cause the differences in fluidity. This study highlights how polymerization parameters can influence membrane fluidity.Micropipette Aspiration was used to measure the mechanical properties of Giant Unilamellar Vesicles (GUVs) composed of dienolyPC lipids. Unpolymerized and UV-polymerized GUVs were investigated. Strength measurements showed that denoylPC GUVs were stronger than sorbylPC GUVs. Area expansion moduli of denoylPCs and mono-SorbPC GUVs were slightly lower than SOPC GUVs, while bis-SorbPC GUVs were substantially easier to stretch. The bending moduli of all GUVs was similar. UV-polymerization had no significant effect on the parameters. The difference in strength between denoylPCs and sorbylPCs is hypothesized to be due to the porous nature of sorbylPCs. It is thought UV-polymerization of these GUVs created polymers too small to significantly alter mechanical properties.It was demonstrated that some stable membranes are also fluid, which is important for the function of certain TMPs. A correlation cannot be made between the bending and stretching moduli of polymerizable membranes and function of TMPs.

Mémoire numérisé par la Direction des bibliothèques de l'Université de Montréal.

Ce travail de recherche s’inscrit dans un axe de diagnostic du cancer via le développement d’une méthode optique pour la caractérisation fonctionnelle de tissus. La technique de gap-FRAP (Fluorescence Recovery After Photobleaching) permet l’étude quantitative de la fonctionnalité des jonctions gap. La majorité des cellules néoplasiques se caractérisent par une modification du niveau d’expression et/ou de la fonctionnalité des jonctions gap par comparaison à leurs homologues saines. Particulièrement utilisée in vitro, la technique de gap-FRAP restait cependant anecdotique ex vivo. Nous avons validé la faisabilité du transfert de cette méthode sur tissus et organes ex vivo. A partir de cellules de statuts différents en expression et en distribution des connexines, nous avons caractérisé la calcéine-AM comme étant une sonde fluorescente adaptée pour des mesures sur tissus. Puis nous avons développé un modèle d’ingénierie systéme pour l’analyse comparative des données de recouvrement de fluorescence sur des modèles bi et tridimensionnels. Nous avons transposé ces conditions préalablement définies sur organe entier ex vivo : la vessie de rat. Un marquage multiple a été optimisé avec une sonde fluorescente pour le tracking des cellules cancéreuses dans la vessie ex vivo, un marqueur pour l’identification histologique de l’urothélium et la calcéine-AM pour mesurer la CIGJ. Le gap-FRAP a été utilisé pour la première fois pour différencier le degré de communication intercellulaire gap jonctionnelle entre le tissu sain et néoplasique sur un organe entier ex vivo, ouvrant des perspectives pour le diagnostic du cancer de la vessie corrélé à la modification de la CIGJ. / Optical methods to characterize tissues for tumor detection are an area of diagnosis research. Gap-FRAP (Fluorescence recovery after photobleaching) technique is used to estimate gap junctions functionality. The majority of malignant cells are characterized by a modification of the number and functionality of gap junctions, compared to their healthy counterparts. Particularly used in vitro, we optimized the use of gap-FRAP technique for a potential transfer on tissues and organs ex vivo. We resolved using cell lines with a different connexin expression and distribution pattern, the choice of a fluorescent dye for further in vivo measurements: calcein-AM. The following stage consisted in developing a system engineering model for the comparative analysis of the fluorescence recovery data for bi-dimensional and three-dimensional (spheroid) models. The conditions previously defined have been transposed in entire organ, bladder rat. Multi-color staining was applied using a fluorescent dye to track to tumors cells in bladder ex vivo, a fluorescent marker to distinguish cellular details of the entire urothelium, and calcein-AM to assess GJIC. Gap-FRAP was used for the first time to differentiate intercellular communication degree between healthy and tumor tissue in entire organ ex vivo opening perspectives for the diagnosis of the bladder cancer correlated to feature modifications of GJIC.