14-3-3 proteins have been extensively studied from yeast to mammals, and are associated with multiple roles ranging from fundamental processes such as cell cycle, apoptosis and stress response to diseases such as neurodegeneration and cancer. Indeed, 14-3-3 proteins have been suggested as possible therapeutic targets in cancer treatment. There are seven 14-3-3 genes in mammals, whereas there are only two in Caenorhabditis elegans, ftt-2 and par-5. The ftt-2 gene is expressed only in somatic lineages, whereas par-5 expression is detected in both soma and germline. Although it is known that par-5 inactivation results in sterility, the role of this gene in germline development is poorly characterized. In the present study, we use a par-5 mutation and RNA interference to characterize par-5 functions in the germline. The lack of par-5 in germ cells causes cell cycle deregulation, the accumulation of endogenous DNA damage and genomic instability. Moreover, par-5 is required for checkpoint-induced cell cycle arrest in response to DNA-damaging agents. We propose a model whereby PAR-5 regulates CDK-1 phosphorylation to prevent premature mitotic entry. Even though mammalian 14-3-3 homologs have diverged into seven genes, we verified that the basic functions of 14-3-3 in cell cycle control have been conserved in C. elegans. Therefore, this study opens a new path to investigate molecular mechanisms of 14-3-3 proteins and establishes C. elegans as a suitable system to screen for genes (RNAi libraries or mutagenesis), and drugs which can modify 14-3-3 functions. / Las proteínas 14-3-3 han sido ampliamente estudiadas desde levadura hasta mamíferos y han sido asociadas con múltiples roles en procesos como ciclo celular, apoptosis y la respuesta al estrés. Así mismo estas proteínas se han visto involucradas en enfermedades neurodegenerativas y cáncer. De hecho, las proteínas 14-3-3 han sido propuestas como posibles agentes terapéuticos en el tratamiento contra el cáncer. En mamíferos existen 7 genes que codifican para proteínas 14-3-3, mientras en Caenorhabditis elegans solo hay dos, ftt-2 and par-5. El gen ftt-2 sólo es expresado en células somáticas, mientras par-5 se expresa tanto en células somáticas como en la línea germinal. Aunque se sabe que la inactivación de par-5 puede producir esterilidad, el rol de este gen en el desarrollo de la línea germinal no ha sido caracterizado. En este estudio, se usó una mutación de par-5 y RNA interferente para caracterizar la función de par-5 en la línea germinal. La falta de par-5 en la línea germinal causa una desregulación del ciclo celular, acumulación de daño genómico e inestabilidad genómica. Además, par-5 es requerido para el arresto celular inducido por el checkpoint en respuesta a los agentes que dañan el genoma. A partir de los resultados obtenidos, se propone un modelo según el cual PAR-5 regula la fosforilación de CDK-1 para prevenir la entrada prematura en mitosis. Aunque los homólogos de 14-3-3 en humanos han divergido en 7 genes, este estudio permitió verificar que las funciones básicas de las proteínas 14-3-3 en el control ciclo celular están conservadas en C. elegans. Por lo tanto, este estudio abre un nuevo camino para estudiar las funciones moleculares de las proteínas 14-3-3 y establece C. elegans como un modelo adecuado para la búsqueda de genes y/o drogas que modifiquen la función de las proteínas 14-3-3.

There is a need for improved reproductive toxicology assays that do not require large numbers of animals but are sensitive and informative. Therefore, Staput velocity-sedimentation separation followed by culture of specific mouse testicular cells was used as such a system. The specificity of separation was assessed using immunocytochemistry to identify spermatids, spermatocytes and spermatogonia. The efficacy of the system to detect toxicity was then evaluated by analysing the effects of hydrogen peroxide (H2O2) by the terminal uridine-deoxynucleotide end-labelling (TUNEL) assay to show the rate of apoptosis induced among the different types of germ cells. We found that 2 h of treatment at both 1¿M and 10¿M induced increases of over ~10-fold in the percentage of apoptotic cells (p¿0.001), confirming that testicular germ cells are prone to apoptosis at very low concentrations of H2O2. It was also demonstrated for the first time for this compound that spermatogonia are significantly more susceptible than spermatocytes, which are more affected than spermatids. This reflects the proportion of actively dividing cells in these cell types, suggesting a mechanism for the differential sensitivity. The approach should thus form the basis of a useful test system for reproductive and genetic toxicology in the future.

Thesis (Ph.D. in Cell and Developmental Biology) -- University of Colorado at Denver and Health Sciences Center, 2005. / Typescript. Includes bibliographical references (leaves 82-86). Free to UCDHSC affiliates. Online version available via ProQuest Digital Dissertations;

La metformine est utilisée chez les patients et patientes atteints du diabète de type II. Elle est également administrée lors d’une infertilité liée à une insulino-résistance ou à un désordre métabolique. Mon projet de recherche a été d’analyser les effets de cet antidiabétique sur la fonction gonadique administré au stade foetal ou à la puberté. Nous avons montré par une approche in vivo sur deux modèles animaux: 1) qu'une administration orale de metformine à des poulets pré-pubères entraine un retard de puberté. Il se caractérise par une réduction du poids testiculaire, du diamètre des tubes séminifères et par une baisse de la testostérone sérique. 2) qu’une exposition des foetus mâles à de la metformine, chez la souris, conduit une fois adulte a une diminution de la taille des portées de 30%. Ce dysfonctionnement est associé à des marques épigénétiques sur l’ADN et des anomalies morphologiques de la tête des spermatozoïdes. Des techniques à haut débit (protéomique et métabolomique) réalisées sur des cultures de cellules de Sertoli immatures traitées ou non à la metformine ont permis de démontrer : 1) que le traitement mène à un métabolisme cellulaire de type Warburglike. 2) que des protéines présentent des différences d’abondance entre les deux conditions et qu’elles sont impliquées dans l’organisation du cytosquelette, de l’adhésion cellulaire, de la compaction de l’ADN, de la régulation de la réponse cellulaire à l’hypoxie et de l’immunité. Les résultats obtenus suggèrent que les grandes fonctions de sécrétion, de support et de protection des cellules de Sertoli sont modifiées par cet antidiabétique et qu’une exposition in utero à la metformine pourrait agir sur la fertilité et sur le métabolisme. / Metformin is used to treat patients with type II diabetes, it could be also administered to improve infertility associated to insulin-resistance or metabolic disorder. My research project was to analyse the consequence of a metformin exposure on gonad function from fetal to adult period. We showed by an in vivo approach on two animal models: 1) that oral administration of metformin to young chickens delay the puberty. It is characterized by a reduction in the testis weight, diameter of seminiferous tubule and decrease in testosterone level. 2) that mice, exposed in utero with metformin leads at adulte age to a lower fertility. This dysfunction is associated with morphological abnormalities of the sperm head and epigenetic marks on DNA. The second approach used proteomic and metabolomic strategy on cultured Sertoli cells treated or not with metformin. We demonstrated : 1) that the treatment leads to Warburg-like cellular metabolism. 2) that proteins present differences of abundances are involved in cytoskeleton organization, cell adhesion, DNA compaction, reponsiveness to hypoxia and immunity. The results suggest that the main function of secretion, support and protection of germ cell by Sertoli cells are modified by this antidiabetic, and that in utero exposure to metformin could act on the fertility and metabolism.

DNA methylation entails the addition of a methyl group to the 5-carbon of the cytosine base of the DNA. This modification is important during many biological processes such as imprinting, X-chromosome inactivation, cell differentiation as well as silencing of transposable elements (TEs). DNA methylation is dynamic during early mammalian development, despite being a more static mark in somatic cells. Global hypomethylation is a hallmark of epigenetic reprogramming in mammalian primordial germ cells (PGCs), the early embryo and in naïve embryonic stem cells (ESCs). Genome integrity is crucial during early development, as the germline DNA needs to be protected for future generations. Therefore, epigenetic reprogramming presents a critical phase for TE defence since presumably alternative silencing pathways need to be employed to limit their activity. In this thesis, I investigate the role of small RNAs to control TEs during global waves of DNA demethylation in cellular reprogramming, naïve pluripotency as well as early mammalian development. Following an introduction to the research questions, in chapter 3 I investigate the mechanism of TE regulation in an in vitro model of Dnmt1 deletion in mouse ES cells to recapitulate in vivo epigenetic reprogramming. I find that certain classes of TEs become transcriptionally upregulated and subsequently resilenced by a mechanism independent of DNA methylation. I identify ARGONAUTE 2 (AGO2) bound siRNAs as the prominent mechanism to control certain classes of TEs, while others appear to be regulated by redistribution of repressive histone modifications. In chapter 4, I construct Dicer constitutive and conditional KO ESCs in the background of the Dnmt1f l/f l ESCs using CRISPR-Cas9. I dissect the role of DNA methylation and of DICER dependent small RNAs on transcriptional changes of ESCs. Additionally, I find that DICER dependent small interfering RNAs (siRNAs) re-silence transcriptionally active TE classes. Finally, in chapter 5, I examine the role of small RNAs in TE silencing in different models of global hypomethylation in vivo and in vitro PGCs, during iPSC reprogramming and in a transition from serum to 2i culturing of mouse ESCs.

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Two fundamental problems of developmental biology are the understanding of cell fate specification, and the integration of broader environmental contexts into developmental programs. While cell fate specification is largely achieved by differential gene expression programs, environmental integration relies on cellular receptors. A predominant mechanism to mediate both processes utilizes nuclear hormone receptors (NHRs). However, it remains unclear how diverse the NHR’s modes of action are in regulating gene expression. This thesis utilizes the development of the C. elegans germ line as a model system to study a novel link that integrates cell fate specification and the nutritional environment. In C. elegans, germ cell fate specification is chiefly controlled by posttranscriptional mechanisms. Furthermore, overall germline development is influenced by the animal’s nutritional status. However, it remains unknown whether germline posttranscriptional control mechanisms and germ cell fate decisions are linked to nutrition, and if so, how this link may operate in molecular terms. This thesis reports the characterization of the nuclear hormone receptor nhr-114 and its crucial functions for germline development and fertility. Depending on the tissue of expression, nhr-114 regulates overall germline organization, germ cell proliferation and oogenesis. Importantly, all aspects of nhr-114 function are linked to diet. Feeding nhr-114 mutants with a specific E. coli strain, or a tryptophan-supplemented diet significantly reduces germline development defects and sterility. Based on mutant analysis, nhr-114 was found to have overlapping functions with gld-4 cytoplasmic poly(A) polymerase (cytoPAP). This thesis provides evidence that nhr-114 may function in germ cells in a posttranscriptional manner linked to gld-4 cytoPAP. Further evidence shows that NHR-114 interacts with GLD-4 cytoPAP. Together these findings suggest that NHR-114 may control gene expression by transcriptional and posttranscriptional mechanisms in a tissue-specific manner. This thesis proposes that NHR-114 ensures the input of tryptophan to allow germline development; and that this function integrates nutritional information into the germline gene expression programs according to the environment of the worm. Therefore, NHR-114 potentially provides a direct molecular link to how a developmental program is coordinated with the nutritional status of an animal.

Germ cells are a pool of cells that serve as a link between generations. These cells are separated from the somatic cells by specialized type of cytoplasm, called the germ plasm. Germ plasm contains, membraneless, electron dense subcellular structures, termed germplasm granules that contain numerous components of mRNA metabolism pathway. One of the most prominent protein families, commonly found in germplasm granules are DEAD-box helicases. While this protein family is currently heavily investigated, surprisingly little is known about their functions in germ plasm granules and the mechanisms of their association with the granules. This work identified novel biological and molecular roles of C. elegans’ LAF-1 in both somatic and germ cells. It reveals strong dependency of animal’s somatic, embryonic and post-embryonic development on LAF-1 activity, resulting in high penetrance developmental arrest phenotype. Moreover, this work documents requirement of LAF-1 for the fertility of the animal. Analysis of germ cells in the absence of LAF-1 activity reveals multilayered defects occurring at all stages of germ cell development and maturation. LAF-1 appears to be involved in the maintenance of proliferating potential of the germline stem cell pool and loss of LAF-1 significantly expands the region occupied by mitotic cells. Furthermore, loss of LAF-1 significantly affects expression of GLD-1, REC-8 and H3-S10P, implying that mitosis-to-meiosis boundary cannot be established correctly in the absence of LAF-1. This work solidifies previous conclusions that LAF-1 is a component of P granules, both in the adult germ cells and embryonic germ cell precursors and reveals that LAF-1 is required for correct assembly and dynamic behavior of P granules. Intrinsically disordered regions present in LAF-1 are indispensable for LAF-1’s association with P granules and its role in recruiting granule components. Lastly, LAF-1 associates with RNPs containing cytoplasmic polyA polymerases, indicating that LAF-1 might be involved in translational regulation. Altogether, the collected data describes biological functions of LAF-1 and elucidates the molecular mechanisms underlying these functions.

Testicular germ cell tumors (TGCTs) are thought to arise during early embryogenesis due to the arrest of germ cell differentiation at primordial germ cells (PGCs) or gonocytes. Oxidative stress (OS) is implicated in cancer development as a factor leading to DNA damage. Reactive oxygen species (ROS) -induced instability occurs as a series of progressive steps. The cell has several defense mechanisms against the deleterious effect of ROS (e.g. antioxidants and DNA repair). When the defense mechanisms are exhausted by increasing OS, DNA damage leads to genomic instability with subsequent mutations that can be transmitted during cell division. On the other hand, male infertility is a representation of testicular dysgenesis syndrome, which carries a risk for TGCTs development. The mechanisms underlying both TGCTs and male infertility are thought to be overlapping to some extent. The central hypothesis of this work is that OS induces germ line genomic instability leading to testicular germ cell tumors. To test this hypothesis, mouse germ cell lines were established and subjected to different doses of OS in the form of H2O2. The mutation frequency was associated with the treatment dose 2 uM at days 3, 6, and 9 (p<0.001, p<0.001, and p<0.0003, respectively). The mBAT27 marker showed a mutation frequency fitting quadratic response surface regression. The mutation frequencies pointed to the possible role of OS leading to accumulation of DNA damage and initiating events that lead to TGCTs development that may occur early in life, possibly during the prenatal period. In addition, different panels of microsatellite markers from across the genome were analyzed to test for differential instability in both somatic cells and germline cells. Blood and semen samples from 18 infertile patients and 7 ethnically matched controls were used. Microsatellite markers were selected; 26 on the Y chromosome, 16 on the X chromosome, and 20 on different autosomes. Microsatellite instability was detected in markers located near genes responsible for testis development, spermatogenesis, cell differentiation, and proteins involved in mismatch repair mechanisms. This supports the hypothesis that testicular germ cell tumors may arise during early embryogenesis through acquiring multiple mutations that accumulate over time.