L'utilisation de champs électriques pulsés (PEF) dans les secteurs de la médecine et de la biotechnologie est devenue de plus en plus courante au cours des dernières décennies. La recherche a montré qu'en ajustant la durée du PEF, nous pouvons prédire quels effets seront observés. Alors que les PEF dans la gamme micro - milliseconde ont été utilisés pour perméabiliser la membrane cellulaire et améliorer l'absorption de médicament ou de protéine, le PEF nanoseconde (nsPEF) a démontré des effets uniques sur les organites intracellulaires. Les deux PEF et nsPEF ont démontré un potentiel thérapeutique pour une variété de pathologies humaines, y compris le traitement du cancer. Utilisant l'imagerie des cellules vivantes, cette thèse a étudié in vitro les effets de champs pulsés d'une durée de 10 ns à 10 ms sur des lignées cancéreuses (U87 glioblastome multiforme) et non cancéreuses (neurones hippocampes de souris (HT22) et cellules ovariennes du hamster chinois (CHO)). Des résultats publiés antérieurement ont démontré que les cellules cancéreuses sont plus sensibles aux champs électriques que les cellules saines. Nos résultats sont en accord avec ces résultats, dans la mesure où les cellules U87 ont subi une dépolarisation significativement plus importante de leur potentiel transmembranaire après une seule impulsion électrique à toutes les durées. Dans un ensemble d'expériences parallèles, malgré des seuils de champ électrique similaires pour la perméabilisation membranaire, les cellules U87 ont démontré une absorption significativement améliorée de YO-PRO par rapport aux autres lignées cellulaires. Bien que les cellules U87 aient subi le plus grand changement dans la dépolarisation membranaire et la perméabilisation membranaire, elles ont également montré la constante de rescellement de la membrane la plus rapide, qui était environ 30 secondes plus rapide que les autres lignées cellulaires. Pour élucider certains des mécanismes sous-jacents par lesquels les cellules U87 répondent aux champs électriques, une série d'expériences a examiné le rôle des canaux ioniques transmembranaires. Plusieurs études récentes ont rapporté que les PEF peuvent agir directement sur les canaux ioniques voltage-dépendants. En utilisant divers modulateurs de canaux ioniques pharmacologiques spécifiques et à action large, nous avons démontré que nous pouvions presque entièrement inhiber la dépolarisation membranaire induite par le champ électrique dans les cellules U87 en bloquant certains canaux cationiques. Ces résultats étaient assez spécifiques, tels que le canal de potassium de grande conductance (BK), les canaux calciques de type L et T, et le canal cationique non spécifique, TRPM8, étaient capables d'inhiber la dépolarisation tandis que le blocage d'autres canaux ioniques ne produisait aucun changement significatif. . Les travaux de cette thèse ont montré que la lignée cellulaire maligne U87 présentait une plus grande sensibilité aux champs électriques allant de 10 ns à 10 ms par rapport aux lignées cellulaires non cancéreuses étudiées. Des améliorations potentielles aux protocoles de traitement actuels ont été proposées sur la base des résultats présentés ici. / The use of pulsed electric fields (PEF) in medical and biotechnology sectors has become increasingly prevalent over the last few decades. Research has shown that by adjusting the duration of the PEF we can predict what effects will be observed. Whereas PEF in the micro-to-millisecond range have been used to permeabilize the cell membrane and enhance drug or protein uptake, nanosecond PEF (nsPEF) have demonstrated unique effects on intracellular organelles. Both PEF and nsPEF have demonstrated therapeutic potential for a variety of human pathologies, including the treatment of cancer. Using live-cell imaging, this thesis investigated, in vitro, the effects of pulsed fields ranging in duration from 10 ns to 10 ms on cancerous (U87 glioblastoma multiforme) and non-cancerous cell lines (mouse hippocampal neurons (HT22) and Chinese hamster ovary (CHO) cells). Previously published results have demonstrated that cancerous cells have a greater sensitivity to applied electric fields than healthy cells do. Our results are in agreement with these findings, insofar as the U87 cells underwent a significantly greater depolarization of their transmembrane potential following a single electric pulse at all durations. In a parallel set of experiments, despite having similar electric field thresholds for membrane permeabilization, the U87 cells demonstrated significantly enhanced YO-PRO uptake compared to the other cells lines. Although U87 cells underwent the greatest change in both membrane depolarization and membrane permeabilization, they also showed the fastest membrane resealing constant, which was approximately 30 seconds faster than other cell lines. To elucidate some of the underlying mechanisms by which U87 cells respond to electric fields, a series of experiments looked at the role of transmembrane ion channels. Several recent studies have reported that PEFs can act directly on voltage-gated ion channels. Using a variety of specific and broad acting pharmacological ion channel modulators, we demonstrated that we could almost entirely inhibit the electric field-induced membrane depolarization in U87 cells by blocking certain cationic channels. These results were quite specific, such that the big conductance potassium (BK) channel, L- and T-type calcium channels, and the non-specific cationic channel, TRPM8, were able to inhibit depolarization while blocking other ion channels produced no significant change. The work in this thesis showed that the malignant U87 cell line showed a greater sensitivity to electric fields from ranging from 10 ns – 10 ms when compared to the non-cancerous cell lines that were investigated. Potential improvements to current treatment protocols have been proposed based on the findings presented herein.

La symbiose ectomycorhizienne, répandue dans les forêts tempérées et boréales, se base sur des échanges nutritionnels entre la plante hôte et des champignons du sol. Ce mutualisme améliore la nutrition minérale et en eau de plantes ligneuses à travers des mécanismes encore méconnus. Ce manuscrit de thèse présente l’ensemble des systèmes de transport membranaire du champignon ectomycorhizien Hebeloma cylindrosporum identifié à partir du génome séquencé, avec un accent sur les gènes dont l’expression est induite en symbiose avec son hôte naturel, le pin maritime (Pinus pinaster). Ces données aideront à focaliser les futures recherches sur les gènes qui sont induits par la symbiose. Le champignon H. cylindrosporum améliore la nutrition potassique de son hôte en situation de carence. Cette étude est axée sur trois canaux ioniques qui peuvent être impliqués dans le transfert de K+ vers la plante. Ces canaux appartiennent à la famille TOK (Tandem-pore Outward-rectifying K+), spécifique de champignons et ont été caractérisés par plusieurs approches expérimentales. Des analyses in silico ont déterminé que ces trois canaux appartiennent à deux sous-familles et ont été nommés HcTOK1, HcTOK2.1 et HcTOK2.2. Leurs propriétés fonctionnelles ont été caractérisées par expression hétérologue pour une analyse en voltage-clamp à deux électrodes et complémentation de levures. La localisation a été étudiée par hybridation in situ en mycorhizes et par fusions gène-eGFP exprimés chez la levure et chez H. cylindrosporum. Le rôle physiologique des canaux HcTOK a été testé en culture pure et en symbiose avec P. pinaster grâces à des lignées transgéniques surexprimant ces gènes. En plus, les effets de la mycorhization par H. cylindrosporum et la nutrition potassique ont été testés chez P. pinaster cultivé en conditions de stress salin. Dans un premier temps, la tolérance du champignon au stress salin a été vérifiée en culture pure, ainsi que l’élément toxique de ce stress. Ensuite, le champignon a été cultivé en deux conditions de nutrition potassique et quatre de salinité pour connaître son homéostasie du K+ et analyser l’expression de ses systèmes de transport. Finalement, des plantules de P. pinaster ont été cultivées inoculées ou non en deux conditions de K+ et quatre de stress salin. En résumé, l’analyse de trois canaux HcTOK ont permis de démontrer les spécificités pour les sous-familles TOK1 et TOK2 et ont suggéré que HcTOK2.2 est probablement un élément clé pour le transfert du K+ via la plante en mycorhize. H. cylindrosporum semble jouer un rôle dans la tolérance à la salinité du pin maritime en diminuant le transfert du Na+ vers la plante et améliorant la nutrition potassique. / The ectomycorrhizal symbiosis, widespread in temperate and boreal ecosystems, is based in nutritional exchanges between the host plant and soil-borne fungi. This mutualism improves plant mineral and water nutrition of woody plants through mechanisms that are still largely unknown. This manuscript presents the whole set of membrane transport systems of the ectomycorrhizal fungus Hebeloma cylindrosporum identified from the sequenced genome, with an emphasis on the genes that are up-regulated in symbiosis with its natural host, the maritime pine (Pinus pinaster). These data will help to focalize future research on symbiosis-induced genes. The fungus H. cylindrosporum enhances the potassium (K+) nutrition of P. pinaster under starvation. This study has focused on three ion channels that could transfer the K+ to the plant. These channels belong to the fungal-specific TOK (Tandem-pore Outward-rectifying K+) family and have been characterized using several approaches. In silico analyses have positioned them in two subfamilies, giving them the names HcTOK1, HcTOK2.1 and HcTOK2.2. Their functional activity has been characterized by heterologous expression for two-electrode voltage-clamp measurements and yeast complementation. Localization has been studied by in situ hybridization in mycorrhiza and by expression of gene-eGFP constructs in yeast and H. cylindrosporum. The physiological role of these channels has been tested in pure culture and symbiosis with transgenic fungal lines overexpressing the HcTOK channels. Furthermore, the effects of H. cylindrosporum and K+ nutrition have been tested in P. pinaster seedlings subjected to salt stress. First, the tolerance to salinity of the fungus was analysed in pure culture with different compounds to identify the most toxic component. Second, the fungus was cultured in different NaCl and K+ conditions to know whether it kept the homeostasis and to check the expression of K+ transport systems. Finally, P. pinaster seedlings were cultured inoculated or not in two different K+ nutrition and four salinity conditions. Altogether, analysis of the three HcTOK channels revealed specificities of the TOK1- and TOK2-type and suggested that HcTOK2.2 might be a main player for the K+ transfer from the fungus towards the plant. H. cylindrosporum seems to play a role in the tolerance to salt stress of the maritime pine by reducing the Na+ transfer to the plant and improving K+ nutrition.

The process of respiration is a pattern of spontaneity and automatic motor control that originate in the brainstem. The mechanism by which the brainstem detects CO2 is termed central CO2 chemoreception (CCR). Since the early 1960’s there have been tremendous efforts placed on identification of central CO2 chemoreceptors (molecules that detect CO2). Even with these efforts, what a central CO2 chemoreceptor looks like remain unknown. To test the hypothesis that inward rectifier K+ (Kir) channels are CO2 sensing molecules in CCR, a series of experiments were carried out. 1) The first question asked was whether the Kir4.1-Kir5.1 channel is expressed in brainstem chemosensitive nuclei. Immunocytochemistry was performed on transverse medullary and pontine sections using antibodies raised against Kir4.1 and Kir5.1. Positive immunoassays for both Kir4.1 and Kir5.1 subunits were found in CO2 chemosensitive neurons. In the LC the Kir4.1 and Kir5.1 were co-expressed with the neurokinin-1 receptor that is the natural receptor for substance P. 2) The second question asked was whether the Kir4.1-Kir5.1 channel is subject to modulation by neurotransmitters critical for respiratory control. My studies demonstrated that indeed the Kir4.1-Kir5.1 channel is subject to modulation by substance P, serotonin and thyrotropin releasing hormone. 3) I performed studies to demonstrate the intracellular signaling system underlying the Kir4.1-Kir5.1 channel modulation by these neurotransmitters. The modulation by all three neurotransmitters was dependent upon the activation of protein kinase C (PKC). The Kir4.1-Kir5.1 but not the Kir4.1 channel was modulated by PKC. Both the Kir4.1 and Kir5.1 subunits can be phosphorylated by PKC in vitro. However, systematic mutational analysis failed to reveal the phosphorylation site. 4) The fourth question asked was whether Kir channels share a common pH gating mechanism that can be identified. Experiments were performed to understand the gating of the Kir6.2+SUR1 channel as specific sites for ligand binding and gating have been demonstrated. I identified a functional gate that was shared by multiple ligands that is Phe168 in the Kir6.2. Other Kir channels appear to share a similar gating mechanism. Taken together, these studies demonstrate the modulation of Kir channels in central CO2 chemoreception.

No description available.

Οι νικοτινικοί υποδοχείς της ακετυλοχολίνης (nAChRs) ανήκουν στην υπερ-οικογένεια των ιοντικών καναλιών που ενεργοποιούνται από τη δέσμευση ενός προσδέτη (LGICs) και αποτελούνται από πέντε ομόλογες υπομονάδες. Κάθε μονομερής υπομονάδα αποτελείται από μία Ν-τελική εξωκυττάρια περιοχή (ΕΚΠ), από τέσσερεις διαμεμβρανικές α-έλικες και από μία κυτταροπλασματική περιοχή. Στην ΕΚΠ βρίσκεται η χαρακτηριστική Cys-θηλιά της υπερ-οικογένειας, καθώς και οι θέσεις πρόσδεσης αγωνιστών και ανταγωνιστών του υποδοχέα. Οι γνώσεις μας γύρω από τη δομή των nAChRs προέρχονται κυρίως από κρυσταλλογραφικές δομές ομολόγων πρωτεϊνών δέσμευσης της ACh (AChBP) μαλακίων, από μια δομή του nAChR από ιχθείς του γένους Torpedo που προέρχεται από ηλεκτρονική μικροσκοπία, από την κρυσταλλογραφική δομή της α1-ΕΚΠ ποντικού σε σύμπλοκο με α-μπουγκαροτοξίνη (α-Btx) και από κρυσταλλογραφικές δομές δύο προκαρυωτικών LGICs. Παρά τη μεγάλη πρόοδο που πραγματοποιήθηκε με τα παραπάνω επιτεύγματα, ακόμη δεν έχει επιλυθεί πειραματικά η δομή ανθρώπινου υποδοχέα. Επίσης λίγα είναι γνωστά για την επίδραση της γλυκοζυλίωσης των ΕΚΠ στη λειτουργία του nAChR. Χρησιμοποιώντας ως εκμαγείο την κρυσταλλογραφική δομή του συμπλόκου α1-ΕΚΠ ποντικού/α-Btx δημιουργήθηκαν υπολογιστικά μοντέλα της ανθρώπινης α1-ΕΚΠ προσδεμένης στις τοξίνες α-μπουγκαροτοξίνη (α-Btx), α-κομπρατοξίνη (α-Cbtx), α-κωνοτοξίνη (α-Ctx) ImI και α-κωνοτοξίνη GI. Στα σύμπλοκα με α-Btx και α-Cbtx προστέθηκε η υδατανθρακική αλυσίδα, συνδεδεμένη με το κατάλοιπο Asn141, που συγκρυσταλλώθηκε μαζί με την α1-ΕΚΠ ποντικού. Για να μελετηθεί η δυναμική συμπεριφορά της αλληλεπίδρασης υποδοχέα-τοξίνης καθώς και η συνεισφορά των σακχάρων σε αυτήν πραγματοποιήθηκαν προσομοιώσεις Μοριακής Δυναμικής σε υδατικό περιβάλλον. Με τη χρήση υπολογιστικών εργαλείων για τη μελέτη των συμπλόκων προσδιορίστηκαν σε ατομικό επίπεδο οι αλληλεπιδράσεις που καθοδηγούν την πρόσδεση τοξινών στην α1-ΕΚΠ. Βρέθηκε ότι η υδατανθρακική αλυσίδα συμμετέχει δυναμικά στη δέσμευση της τοξίνης στον υποδοχέα. Τα σάκχαρα συγκλίνουν προς την προσδεμένη τοξίνη στηριζόμενα στα κατάλοιπα Ser187 και Trp184 της α1 υπομονάδας. Η τοξίνη επίσης μετακινείται φέρνοντας τη θηλιά Ι σε επαφή με τα σάκχαρα. Αναγνωρίστηκαν σημαντικές αλληλεπιδράσεις των σακχάρων με τα τοξινικά κατάλοιπα Thr6, Ser9, και Th15 της α-Btx και Thr6 και Pro7 της α-Cbtx. Επίσης επιβεβαιώθηκε η ύπαρξη μιας υδρόφιλης κοιλότητας στο εσωτερικό του υδρόφοβου πυρήνα της α1-ΕΚΠ, η οποία πιθανόν εμπλέκεται στο άνοιγμα του ιοντικού καναλιού του nAChR. Τα αποτελέσματα αυτά παρέχουν σημαντικά δεδομένα για την κατανόηση της επίδρασης της υδατανθρακικής αλυσίδας στη λειτουργία του υποδοχέα, η οποία μπορεί να αξιοποιηθεί στην αντιμετώπιση των πολλών παθολογικών καταστάσεων στις οποίες εμπλέκονται οι nAChRs. / Nicotinic acetylcholine receptors (nAChRs) belong to the superfamily of ligand-gated ion channels (LGICs). LGICs form homo- or hetero-pentamers of related subunits, and each of them consists of a N-terminal extracellular ligand-binding domain (ECD), four transmembrane α-helixes and an intracellular region. The characteristic Cys-loop of the superfamily is found in the ECD of each subunit. The ECD also contains binding sites for agonists and competitive antagonists. Our knowledge regarding the nAChR structure mainly derives from the X-ray crystal structures of the molluscan ACh-binding proteins (AChBPs), the electron microscopy structure of the Torpedo nAChR, the X-ray crystal structure of the mouse nAChR α1-ECD bound to α-bungarotoxin (α-Btx), and the X-ray crystal structures of two prokaryotic LGICs. Despite the progress made by these achievements, the determination of any human nAChR structure has not yet been accomplished. Furthermore, the effect of glycosylation on nAChR function has not yet been explored. Based on the crystal structure of the extracellular domain of the mouse nAChR α1 subunit bound to α-Btx we have generated in silico models of the human nAChR α1-ECD bound to the toxins α-bungarotoxin (α-Btx), α-cobratoxin (α-Cbtx), α-conotoxin (α-Ctx) ImI and α-conotoxin GI. In the case of the α1-ECD/α-Btx and α-Cbtx complexes, a Asn141-linked carbohydrate chain was modeled, its coordinates taken from the crystal structure of the mouse α1-ECD. To gain further insight into the structural role of glycosylation molecular dynamics (MD) simulations were carried out in explicit solvent so as to compare the conformational dynamics of the binding interface between nAChR α1 and the two toxins. The use of computational methods allowed the monitoring of the interactions that govern toxin binding. The MD simulations revealed the strengthening of the receptor-toxin interaction in the presence of the carbohydrate chain. A shift in the position of the sugars towards the bound toxin was observed. Residues Ser187 and Trp184 of nAChR act as critical anchor points for the stabilization of the sugar chain in a close position to the toxin. Toxin Finger I shifts closer to the mannoses, forming important toxin-sugar interactions that implicate residues Thr6, Ser9, and Thr15 of α-Btx, as well as Thr6 and Pro7 of α-Cbtx. Additionally the MD simulations of the human α1 ECD–toxin complexes confirmed the possible accommodation of two water molecules into a hydration cavity inside the hydrophobic core of the subunit, which may contribute to the gating mechanism of the receptor. These findings provide additional structural data that are intended to inspire biophysical studies on the functional role of glycosylation in the gating mechanism of nAChR and also guide the development of novel therapeutic agents for the treatment of nAChR-associated diseases.

L'objectif de cette thèse était de développer et de caractériser un modèle de cellules souches cardiaques humaines dans un contexte de thérapie cellulaire. Après avoir sélectionné et caractérisé une population de cellules souches d'origine mésenchymateuse, isolée à partir d'auricules humaines, exprimant le marqueur W8B2 (CSCs W8B2+), nous nous sommes focalisés (par les techniques de RT-qPCR à haut rendement, d'immuno-marquage, de western-blot et de fluorescence calcique) sur ; 1. la caractérisation génique des canaux ioniques et des acteurs de la signalisation calcique et 2. l'étude de leur différenciation in vitro en parallèle à l'activité calcique intracellulaire. Les résultats montrent que CSCs W8B2+ tendent à se différencier en cellules pacemaker. Certains gènes spécifiques nodaux, comme Tbx3, HCN, ICaT,L, Kv, NCX, s'expriment durant la différenciation. L'enregistrement de l'activité calcique (via une sonde optogénétique) montre la présence d'oscillations calciques qui évoluent en fréquence et en intensité pendant la différenciation. Les stocks-IP3 sensibles et l'échangeur NCX joueraient un rôle fondamental.Nous avons ensuite étudié l'importance du canal BKCa et des récepteurs sphingosine 1-phosphate (S1P) dans la régulation des propriétés fondamentales des CSCs W8B2+. L'inhibition du BKCa diminue la prolifération cellulaire en accumulant les cellules à la phase G0/G1, réprime l'auto-renouvellement mais n'affecte pas la migration. Quant à la S1P elle freine la prolifération et l'auto-renouvellement via une voie différente de celles des récepteurs S1P1,2,3.Ce travail fait ressortir des cibles moléculaires fondamentales dans un contexte de thérapie cellulaire cardiaque. / The aim of this thesis was to develop and characterize a model of human heart stem cells in a context of cell therapy.A population of mesenchymal stem cells, expressing the W8B2 marker (CSCs W8B2+), was first isolated from human auricles and characterized using high-throughput RT-qPCR techniques, immuno-labeling, western-blot and calcium fluorescence imaging. These experiments were focused on 1. the gene expression of ion channels and calcium signaling proteins; and 2. the study of CSCs W8B2+ in vitro differentiation and associated intracellular calcium activity changes.The results show that CSCs W8B2+ tend to differentiate into pacemaker cells. Some nodal specific genes such as Tbx3, HCN, ICaT, L, Kv, NCX, are expressed during differentiation. The recording of calcium activity (via an optogenetic probe) shows the presence of calcium oscillations that change in frequency and intensity during differentiation. IP3 sensitive calcium stocks and the NCX exchanger would play a fundamental role in these variations.Then we studied the importance of the BKCa channel and the sphingosine 1-phosphate (S1P) receptors in the regulation of the fundamental properties of the W8B2+ CSCs. Inhibition of BKCa reduces cell proliferation by accumulating cells in the G0 / G1 phase, suppresses cell self-renewal but does not affect migration properties. Concerning S1P, it decreases proliferation and self-renewal without stimulate S1P1,2,3 receptors.This work highlights fundamental potential molecular targets in a context of cardiac cell therapy.

Submitted by Maike Costa (maiksebas@gmail.com) on 2016-08-29T12:39:56Z No. of bitstreams: 1 arquivo total.pdf: 2695338 bytes, checksum: a378ea64a8ee3f1da67dc243ed293db5 (MD5) / Made available in DSpace on 2016-08-29T12:39:56Z (GMT). No. of bitstreams: 1 arquivo total.pdf: 2695338 bytes, checksum: a378ea64a8ee3f1da67dc243ed293db5 (MD5) Previous issue date: 2015-05-29 / Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPq / Despite advances in research oncology field, has been an increased incidence and mortality caused by cancer, consisting in a major public health problem. Literature reports, that Morita-Baylis Hillman adducts (MBHA) show promising biological activities, such as: antiparasitic, against Leishmania, Plasmodium sp. and Trypanosomes, as well as effect on sea urchin embryo development. To assess anticancer and anti-inflammatory potential of three AMBH: A2CN, and A3CN, A4CN, we used various biological models. In MTT assay, the adducts were potentially toxic to eight cancer cell lines tested (HL-60, MOLT-4, K562, K562-Lucena, MCF-7, HT- 29, L929 and B16F10), however A2CN was the most cytotoxic, with IC50 lower for most cells. Acute myeloid leukemia cells, HL-60 and MOLT-4, were more sensitive and A2CN had IC50 22 and 21 μM in these cells. In chronic myelogenic leukemia cells, K562 and Lucena, A2CN presented IC50 of 58 and 60 μM, respectively. A2CN has been less cytotoxic to normal cells in peripheral blood and normal human fibroblasts (FN1), and IC50 was 78 and 126 μM, respectively. The action mechanism induced by A2CN in K562 cells was studied at 15, 30 and 60 μM. The cell viability has not altered when analyzed with propidium iodide, using flow cytometry, showing that A2CN not induced necrosis in these cells. A2CN increased mitochondrial membrane depolarization by 20 % at highest concentration tested. Cytotoxicity of A2CN in K562 cells were related to cell cycle arrest in G1-phase at 15 μM, and Sphase at highest concentration (60 uM) and ROS production increased at the highest concentration tested. Cell cycle arrest in S-phase was related to high expression mRNA of p21, p27 and p53, together with decreased expression of cyclin D1. A2CN also augmented expression of Kv1.3 and Kv3.1 genes in K562 cells treated with 60 μM. In electrophysiological assays, using the whole-cell "patch clamp", A2CN (120 μM) promoted increase total K+ current in K562, and conductance K+ ion was elevated. The potassium channel blocker, 4-aminopyridine (4-AP) (1 mM) decreased the A2CN cytotoxicity in K562 cells analyzed by MTT reduction, indicating that K+ channels have been involved in its cytotoxicity. The in vitro anti-inflammatory activity of A2CN, A3CN and A4CN was evaluated in LPS-stimulated RAW 264.7 macrophages. AMBHs did not reduced cell viability to concentration 20 μM, however, inhibited NO and ROS production induced by LPS. IL-1 β and IL-6 production was completely inhibited by 10 μM of AMBH, but no change in TNF-α levels. Expression of IL-1β and IL-6 genes were also altered by A2CN, A3CN and A4CN, but only A2CN was able to inhibit gene expression of cyclooxygenase-2 (COX-2). Therefore, it can be concluded that A2CN showed be potent anticancer activity, acting on molecular targets that are objects preclinical and clinical studies in oncology, such as p53, p21, p27 and cyclin D1, and proved to be a potent activator of potassium channels. Furthermore, adducts showed remarkable anti-inflammatory potential, a reduction of proinflammatory cytokines such as IL-1 β and IL-6 and COX-2 expression by A2CN. / Apesar dos avanços das pesquisas no campo da oncologia, existe um aumento na incidência do câncer e na mortalidade por esta doença, consistindo em um dos principais problemas de saúde pública. A literatura relata que os Adutos de Morita Baylis-Hillman (AMBH) apresentam atividades biológicas promissoras, tais como: antiparasitária, contra Leishmania sp., Plasmodium sp., e Trypanosoma cruzi, bem como, efeito no desenvolvimento de células embrionárias de ouriço-do-mar. Para avaliar o potencial anticâncer e anti-inflamatório de três AMBH: A2CN, A3CN e A4CN, utilizou-se vários modelos biológicos. Os resultados mostraram que no teste de redução do MTT, os adutos foram potencialmente citotóxicos para as oito linhagens cancerígenas testadas (HL-60, MOLT-4, K562, K562-Lucena, MCF-7, HT- 29, L929, B16F10), contudo A2CN foi o AMBH mais citotóxico, apresentando menor CI50 para a maioria das linhagens. As linhagens de leucemia mielóide aguda HL-60 e MOLT-4 foram as mais sensíveis, e A2CN apresentou CI50 de 22 e 21 μM nestas células. Nas células de leucemia mielóide crônica K562 e Lucena, A2CN apresentou CI50 de 58 e 60 μM, respectivamente. A2CN foi menos citotóxico para as células normais do sangue periférico e para a linhagem de fibroblastos humano normal (FN1), cuja CI50 foi de 78 e 126 μM, respectivamente. O mecanismo de ação de A2CN foi estudado nas células K562, nas concentrações de 15, 30 e 60 μM. A viabilidade da membrana celular não foi alterada, quando analisada com iodeto de propídeo em citômetro de fluxo, mostrando que, a molécula não induziu necrose nestas células. A2CN promoveu um aumento da despolarização da membrana mitocondrial em 20 %, na maior concentração testada, caracterizando um envolvimento da via intrínseca da apoptose. A atividade citotóxica de A2CN em K562 está relacionada à parada no ciclo celular na fase G1, a partir de 15 μM, e na fase S na maior concentração testada de 60 μM. A produção de ROS foi aumentada na maior concentração testada. A parada no ciclo celular na fase S está relacionada com o aumento na expressão do RNAm de p21, p27 e p53 e diminuição na expressão de ciclina D1. A expressão dos genes para Kv1.3 e Kv3.1 também foi aumentada nas células K562, tratadas com 60 μM. Nos ensaios eletrofisiológicos usando a técnica de whole-cell, “patch clamp”, A2CN (120 μM) promoveu um aumento na corrente total de K+ em K562, bem como, aumentou a condutância ao íon K+. O bloqueador de canal de potássio, 4-aminopiridina (4-AP) (1 mM) reduziu a citotoxicidade de A2CN nas células K562, analisadas pela redução do MTT, indicando que os canais de K+ estão envolvidos na citotoxicidade desta molécula. A atividade anti-inflamatória de A2CN, A3CN e A4CN, foi avaliada in vitro na linhagem de macrófagos Raw 264.7, estimulada com (1 μg/ml) de LPS. Os AMBH não reduziram a viabilidade das células até a concentração de 20 μM, contudo inibiram a produção de NO e a produção de ROS induzida pelo LPS a partir da menor concentração dos AMBH, de 2,5 μM. A produção das citocinas IL-1 e IL-6 foi completamente inibida por 10 μM dos AMBH, mas não houve alteração nos níveis de TNF-α. A expressão nos genes das citocinas IL-1 e IL-6, também foram alteradas por A2CN, A3CN e A4CN, porém, apenas A2CN foi capaz de inibir a expressão do gene da Ciclo-oxigenase-2 (COX-2). Isto posto, pode-se concluir que A2CN apresentou potente atividade anticâncer, atuando em alvos moleculares que são objetos de estudos pré-clínicos e clínicos na área oncológica, como p53, p21, p27 e ciclina D1, bem como demonstrou ser um potente ativador de canais de potássio. Além disso, os adutos apresentaram notável potencial anti-inflamatório, com diminuição de citocinas pró-inflamatórias como IL-1 e IL-6, e inibição da expressão de COX-2 por A2CN.

Chemical reactions involving small number of reacting molecules are noisy processes. They are simulated using stochastic simulation algorithms like the Gillespie SSA, which are valid when the reaction environment is well-mixed. This is not the case in reactions occuring on biological media like cell membranes, where alternative simulation methods have to be used to account for the crowded nature of the reacting environment. Ion channels, which are membrane proteins controlling the flow of ions into and out of the cell, offer excellent single molecule conditions to test stochastic simulation schemes in crowded biological media. Single molecule reactions are of great importance in determining the functions of biological molecules. Access to their experimental data have increased the scope of com-putational modeling of biological processes. Recently, single molecule experiments have revealed the non-Markovian nature of chemical reactions, due to a phenomenon called `dynamic disorder', which makes the rate constants a deterministic function of time or a random process. This happens when there are additional slow scale conformational transitions, giving the molecule a memory of its previous states. In a previous work, the hTREK1 two pore domain potassium channel was revealed to have long term memory in its kinetics, prompting alternate non-Markovian schemes to analyze its gating. Traditionally, ion channel gating is modeled as Markovian transitions between fixed states. In this work, we have used single channel data from hTREK1 ion channel and have provided a simple diffusion model for its gating. The main assumption of this model is that the ion channel diffuses through a continuum of states on its potential energy landscape, which is derived from the steady state probability distribution of ionic current recorded from patch clamp experiments. A stochastic differential equation (SDE) driven by Gaussian white noise is proposed to model this motion in an asymmetric double well potential. The method is computationally very simple and efficient and reproduces the amplitude histogram very well. For the case when ligands are added, leading to incorporation of long term memory in the kinetics, the SDE is modified to run on coloured noise. This has been done by introducing an auxiliary variable into the equation. It has been shown that increasing the noise correlation with ligand concentration improves the fits to the experimental data. This has been validated for several datasets. These methods are more advantageous for simulation than the Markovian models as they are true to the physical picture of gating and also computationally very efficient. Reproducing the whole raw data trace takes no more than a few seconds with our scheme, with the only input being the amplitude histogram and four parameters. Finally a quantitative model based on a modified version of the Chemical Langevin equation is given, which works on random rate parameters. This model is computationally simple to implement and reproduces the catalytic activity of the channel as a function of time. From the computational analysis undertaken in this work, we can infer that ion channel activity can be modeled using the framework of non-Markovian processes, lending credence to the recent understanding that single molecule reactions are basically processes with long-term memory. Since the ion channel is basically a protein, we can also hypothesize that the some of the properties that make proteins so vital to living organ-isms could be attributed to long-term memory in their folding kinetics, giving them the ability to sample specific regions of their conformation space, which are of interest to biological functions.

L'infarctus du myocarde constitue la première cause de mortalité cardiovasculaire. Dans ce contexte, depuis plus de 40 ans et les premières études sur les populations du Groenland, il est connu qu'une consommation de poisson riche en acide gras polyinsaturés de type omégas 3 (AGPI n-3) a des effets cardioprotecteurs. De très nombreuses études cliniques, animales et cellulaires ont ensuite confirmé ces résultats cardioprotecteurs des AGPI n-3 qui semblent passer par une prévention des arythmies cardiaques post infarctus.Cependant, du fait de leurs nombreuses doubles liaisons carbone-carbone, les principaux AGPI n-3 que sont l'acide eicosapentaénoïque et l'acide docosahexaénoïque sont très sensibles à l'oxygénation à l'air et peuvent subir une peroxydation non enzymatique spontanée sous condition de stress oxydant qui accompagne notamment l'ischémie/reperfusion lors d'un infarctus du myocarde.Dans ce travail de thèse, nous posons la question de savoir quelle forme d'AGPI a des effets cardioprotecteur : la forme réduite ou oxydée. En effet, les effets des AGPI n-3 sur la fonction cardiaque sont très controversés, notamment due au manque d'information sur les mécanismes impliqués. Particulièrement, on ne sait pas quel lipide est actif : les AGPI n-3 ou un des leurs métabolites oxygénés.Durant l'ischémie reperfusion puis dans les mois qui suivent l'infarctus du myocarde, le stress oxydant est élevé et de nombreux métabolites non enzymatiques dérivés des AGPI n-3 comme les NeuroProstanes sont alors produits à tel point qu'ils sont reconnus comme biomarqueurs du stress oxydant. Ainsi, dans ce travail de recherche, nous spéculons que les NeuroProstanes ne sont pas seulement des biomarqueurs du stress oxydant mais auraient un rôle biologiquement actif qui expliqueraient les effets cardioprotecteurs connus de leurs précurseurs ; les AGPI n-3.Le but de cette thèse est dans un premier temps d'investiguer l'influence de la peroxydation lipidique du DHA sur ses propriétés antiarythmiques in cellulo sur des cellules ventriculaires cardiaques isolées puis in vivo sur des souris ayant subit un infarctus du myocarde par ligature de l'artère coronaire gauche. De la même manière, nous avons évalué les propriétés antiarythmiques des métabolites non enzymatique des AGPI n-3 et notamment le 4(RS)-4F4t-NeuroProstane. Dans un second temps et de manière plus précoce, nous avons observé si une infusion préventive de 4(RS)-4F4t-NeuroP chez le rat, 20 minutes avant un épisode d'ischémie reperfusion peut protéger le myocarde des dommages ischémiques (morts cellulaires), des arythmies et des altérations morpho-fonctionnelles.L'ensemble de ce travail de thèse a ainsi permis de mettre en évidence que un des médiateurs lipidiques des AGPI n-3 ; le 4(RS)-4-F4t-NeuroP peut exercer des effets biologiquement actifs qui passent par une prévention des arythmies dans les mois qui suivent l'infarctus du myocarde ; effets passant par une prévention des modifications post-translationnelles du RyR2 et in fine d'une régulation de l'homéostasie calcique. De manière plus précoce durant l'ischémie reperfusion, nos résultats montrent que le 4(RS)-4-F4t-NeuroP réduit les arythmies ventriculaires, la taille de la zone infarcie et la dysfonction cardiaque, effets cardioprotecteurs qui passent par des mécanismes mitochondriaux.Le travail de cette thèse démontre pour la première fois que le DHA n'exerce pas d'effets cardioprotecteurs mais que ce serait les produits issus de son oxydation non enzymatique tel le 4(RS)-4-F4t-NeuroP pouvant ainsi expliquer l'ensemble des effets connus des AGPI n-3. Cette découverte ouvre de nouvelles perspectives sur les produits oxydés non enzymatiques des AGPI n-3 comme des potentiels médiateurs dans les maladies comme durant l'infarctus du myocarde ou le stress oxydant qui est généré joue un rôle prépondérant dans les altérations physiopathologiques qui en découlent. / Since 40 years, ω3 poly-unsaturated fatty acids (n-3 PUFA) are known to have cardioprotective properties in ischemic disease such as cardiac infarction following ischemia/reperfusion period. Many studies in isolated cells or in animals confirmed these effects and it has been suggested that n-3 PUFA have direct effects on targeted proteins such as ionic channels. However, due to the abundance of double carbone bounds, the main n-3 PUFA; eicosapentaenoic acid (C20: 5 n-3, EPA) and docosahexaenoic acid (C22: 6 n-3, DHA) are very sensitive to free radical oxidation and can undergo non-enzymatic spontaneous peroxidation under oxidative stress conditions as it occurs in ischemia/reperfusion. In the present work, we addressed the question of the form of DHA having cardioprotective properties: reduced or oxidized. Indeed, the effects of n-3 PUFA on cardiac function are controversial, notably due to the lack of information on the mechanisms involved. Particularly, it is not well understood which is the active lipid: the PUFA or one of its oxygenated metabolites. In the context of oxidative stress, during ischemia/reperfusion and in month following cardiac infarction, a lot of oxygenated metabolites of PUFA like Neuroprostane; 4(RS)-4F4t-NeuroP are produced and used as biomarkers of oxidative stress. This metabolite is associated to a lower atherosclerosis risk suggesting a beneficial role in cardiovascular diseases. In this context we speculate that Neuroprostane are not just a markers of stress conditions but have biological activities.The aim of this thesis was in first time to investigate the influence of DHA peroxidation on its potentially anti-arrhythmic properties in isolated ventricular cardiomyocytes and in vivo in post-myocardial infarcted (PMI) mice. In same way, we investigated in cellulo and in vivo anti-arrhythmic properties of oxygenated metabolites of n-3 PUFA such as 4(RS)-4F4t-NeuroP. In second time we investigated if the pericardial delivery 20 minutes before occlusion of 4F4t-NeuroP protects in prevention the myocardium from ischemic damages and arrhythmias during and following an I/R episode in rats.In this study, we challenged the paradigm that spontaneously formed oxygenated metabolites of lipids are undesirable as they are unconditionally toxic. This study reveals that the lipid mediator 4(RS)-4-F4t-NeuroP derived from non-enzymatic peroxidation of DHA, can counteract such deleterious effects through cardiac anti-arrhythmic properties in month following cardiac infarction by preventing deleterious post-translational modification of RyR2 and thus regulating calcium homeostasis. More early, during ischemia/reperfusion, our results show that pericardial delivery of 4(RS)-4-F4t-NeuroP reduced ischemia-induced ventricular arrhythmias, infarct sizes, and cardiac dysfonction ; cardioprotective effects involving mitchondria mecanisms.This thesis demonstrate for the first time that DHA per se has no anti-arrhythmic effects and 4(RS)-4-F4t-NeuroP as a mediator of the cardioprotection characteristics of DHA. This discovery opens new perspectives for products of non-enzymatic oxidized n-3 PUFA as potent mediators in oxidative stress diseases like during a cardiac infarction, where oxidative stress generated play fundamental role in pathophysiological alterations.

Background potassium currents play an important role in the regulation of the resting membrane potential and excitability of mammalian neurons. Recently cloned two- pore domain potassium channels (K2p) are believed to underlie these currents. The roles of K2P channels in general anesthesia and neuroprotection have been proposed recently. In view of this, we investigated the ability of trichloroethanol (an active metabolite of the non-volatile general anesthetic cldoral hydrate, widely used as a pediatric sedative) to modulate the activity of human TREK-1 and TRAAK channels. We found that trichloroethanol potently activates both hTREK-1 and hTRAAK channels at pharmacologically relevant concentrations. The parent compound chloral hydrate was also found to augtnent the activity of both the channels reversibly. Studies with carboxy- terminal deletion mutants (hTREK-1A89, hTREK-1 A100 and hTREK-1 A1 19), suggested that C-terminal tail is not essential for the activation of TREK-1 by trichloroethanol. Our findings identify TREK-1 and TRCL4K channels as molecular targets for trichloroethanol and we propose that activation of both these channels might contribute to the CNS depressant effects of chloral hydrate. Another channel TASK-2, which is essentially absent in the human brain was also found to be potently activated by both trichloroethanol and chloral hydrate. In another series of experiments, we studied the effects of methyl xanthines caffeine and theophylline on hTREK-1 channels. Caffeine and theophylline are used for therapeutic purposes and frequently cause life-threatening convulsive seizures due to systemic toxicity. The mechanisms for the epileptogenicity of caffeine and theophylline are not clear. Recent experiments using knockout mice provided direct evidence for a role for TREK-1 in the control of epileptogenesis. We hypothesized that the epileptogenicity of caffeine and theophylline may be related to the inhibition of TREK-1 channels. We investigated this possibility and observed massive inhibition of TREK-1 channels at toxicologically relevant concentrations. Experiments with the mutant TREK-1 channel (S348A mutant) suggested the involvement of cANP/PKA pathway in the inhibition of TREK-1 channels by caffeine and theophylline. We suggest that inhibition of TREK-1 channels may contribute to the convulsive seizures induced by toxic levels of caffeine and theophylline. Local anesthetics exhibit their clinical effects not only by binding to voltage-gated sodium channels, but also by interacting with other ion channels such as potassium channels. Because of the physiological significance of TREK-1 channels and their abundant expression in peripheral sensory neurons, we investigated the effects of lidocaine to see whether its interaction with 'REK-1 channels contribute to the conduction blockade. Lidocaine caused dose-dependent inhibition of TREK-1channels and the inhibition was voltage-independent. Cytoplasmic C-terminal tail is critically required for lidocaine action. Inhibition of TREK-1 channels is achieved at concentrations for iiz vivo action and this effect may have implications for the clinically observed drug action of lidocaine.