Les chiffres des statistiques du cancer colorectal en France et dans le mondemontrent la nécessité de développement de plateformes technologiques plus rapides,sensibles et spécifiques pour assurer le diagnostic du cancer. Un diagnostic rapide va ainsiaider à améliorer l’état de santé et réduire le temps d’attente des résultats qui peut être ungrand facteur de stress pour les patients. L’analyse des biomarqueurs dans le sang, lesurines et autres fluides corporels est l’une des méthodes appliquées pour la détectionprécoce de la maladie. Dans le cadre de ce projet des nucléosides urinaires ont été identifiéscomme biomarqueurs pour le cancer colorectal. Financée par l’Agence Nationale de laRecherche (ANR), à travers le projet CancerSensor (programme TECSAN), cette thèse s’estdéroulée au sein de l’équipe MDA (Microsystèmes de Détection Acoustique) du laboratoireIMS. Dans le cadre de ce projet, nous avons proposé une solution technologique dedétection et de suivi de biomarqueurs du cancer colorectal. Notre choix de la stratégie dedétection s’est porté sur les polymères à empreintes moléculaires comme élément dereconnaissance des biomarqueurs. Celui-ci sera associé à un transducteur acoustique àondes de Love mis au point lors de travaux précédents au sein de l’équipe MDA. Lebiocapteur ainsi développé va cibler les nucléosides mis en évidence pour le cancercolorectal. / Colorectal cancer statistics in France and all over the world demonstrate theneed for fast, sensitive and specific technological platforms development for cancerdiagnosis. A rapid diagnosis will improve the patients’ health status and reduce the resultswaiting time which could be a great stress factor. Biomarkers analysis in blood, urine andother body fluids is recognized as one of the applied methods for early cancer detection. Inframe of this project, urinary nucleosides have been identified as colorectal cancerbiomarkers. Funded by the National Research Agency (ANR), through the cancer sensorproject (TECSAN program), this thesis was carried out in IMS laboratory. Hence, a colorectalcancer biomarkers detection and monitoring technological solution has been proposed. Inour detection strategy, Molecularly Imprinted Polymers (MIP) has been identified asbiomarker recognition element. The MIP layer has been associated to Love Wave acoustictransducer. This biosensor will sense the identified colorectal cancer nucleosides.

Ce rapport de thèse présente l’étude de la technologie des empreintes moléculaires pour le développement de polymères spécifiques et sélectifs envers des biomarqueurs urinaires nucléosidiques du cancer colorectal chez l’Homme. L’objectif principal était de développer des polymères à empreintes moléculaires compatibles aux milieux aqueux en utilisant la technique du « dummy template », l’approche non-covalente and la polymérisation radicalaire en masse. Nous nous sommes concentrés principalement sur la qualité des polymères à partir de leur formulation, c’est-à-dire la spécificité et la sélectivité. Cela a été mené de façon empirique d’abord par la production de poudres issues de polymères monolithiques. Ainsi, pour atteindre les objectifs fixés, nous avons exploré le choix de la molécule « template ». Une étude de modèle est présentée au chapitre 3, en utilisant trois nucléosides 2’,3’,5’-peracétylés comme molécule empreinte dans une approche « dummy template ». Ensuite, en s’appuyant sur la connaissance apportée par le chapitre 3, nous avons développé des polymères à empreintes moléculaires (MIPs) sélectifs de la pseudouridine et de la N7-méthylguanosine dans les chapitres 4 et 5, respectivement, en utilisant la 2’,3’,5’-tri-O-acétylpseudouridine et la 2’,3’,5’-tri-O-acétylguanosine comme templates. L’étude de la rétention des nucléosides recherchés et de leurs analogues structuraux menée par chromatographie en phase liquide et par analyse frontale a permis de déterminer la capacité des différents polymères et de connaître leur comportement dans de l’urine synthétique. Finalement, pour évaluer la possible application de ces polymères dans un échantillon réel, l’urine humaine, la technique de l’extraction sur phase solide à empreintes moléculaires ou MISPE a été développée. Ainsi, une purification sélective des biomarqueurs cibles, tels que la pseudouridine et la N7-méthylguanosine, dans des échantillons d’urines a pu être démontrée. / This thesis report presents the exploration of molecularly imprinted polymer (MIP) technology for developing of a sensitive and selective polymers used in urinary nucleoside biomarker recognition. The main goal was to develop water compatible MIPs prepared by a “dummy template” imprinting technology, using a non-covalent approach and radical-polymerization in bulk. We were focusing mostly on the polymer quality in the formulation (rigidity, stability and repeatability). This was chosen empirically first by production of powders from monolithic MIP. Thus, to accomplish the stated goals, we have explored the choice of the template molecule. A model study presented by Chapter 3, using three 2’3’5’-tri-Operacylateduridine nucleosides as templates in a “dummy” template approach was first developed. Then, applying the knowledge of the type of template choice, we developed a selective MIP for recognition of pseudouridine and N7-methylguanosine in the studies presented in Chapter 4 and Chapter 5 respectively. By using 2’3’5’-tri-O-acetylpseudouridine and 2’3’5’-tri-O-acetylguanosine as templates. Chromatographic methods like HPLC retention and frontal analysis were used in the interest of determining the binding capacity of synthesized polymers, and the behavior in synthetic urine. Finally, to evaluate the possible application of these polymers in urine, molecularly imprinted solid phase extraction (MISPE) was developed. Selective purification of urine samples containing pseudouridine and N7-methylguanosine obtained in the end.

The present work describes the development of a highly sensitive and selective molecularly imprinted electrochemical sensor for 4-nitrophenol detection. A glassy carbon electrode was modified with vyniltrimethoxisylane (VTMS) and multiwall carbon nanotubes (MWCNT). The introduced nanocomposite increased surface area and active sites for electron transfer. When the sillane is used on the synthesis, it is named MIS (molecularly imprinted silane) and NIS (non-imprinted silane) when the analyte is not on the synthesis. For those silane films characterization, it was used the scanning electron microscopy (SEM), thermogravimetric analysis (TGA) and fourier transform infrared spectroscopy (FTIR). This sensor showed its best performance in 0.1 mol L-1 phosphate buffer solution, at pH 7.0. After optimizing the operational conditions, this sensor provided a linear response range for 4-NP from 0.1 up to 100 μmol L-1 and good parameters as LOD, LOQ and sensibility, 0.03 μmol L-1, 0.1 μmol L-1 and 1.4×10-2 A mol L-1 respectively. Furthermore, the MIS/PNP sensor exhibited good stability with adequate reproducibility and accuracy. / No presente trabalho é descrito o desenvolvimento de um sensor eletroquímico altamente sensível e seletivo baseado na tecnolgia dos Polímeros Impresso Molecularmente para detecção de 4-nitrofenol. Um eletrodo de carbono vítreo foi modificado com viniltrimetoxisilano (VTMS) e nanotubos de carbono de pardes múltiplas (MWCNT). O nanocompósito de carbono introduzido aumentou a área superficial e os locais ativos para transferência de elétrons. No método sol-gel quando um sillano é usado na síntese, é denominado MIS (Molecular Imprinted Silane) e NIS (non-imprinted Silane) quando o analito não está na síntese. Para a caracterização dos filmes de silanos utilizou - se a microscopia eletrônica de varredura (MEV), a análise termogravimétrica (TGA) e a espectroscopia de infravermelho por transformação de Fourier (FTIR). Este sensor apresentou o seu melhor desempenho em solução tampão fosfato 0,1 mol L-1, a pH 7,0. Depois de otimizado as condições operacionais, este sensor proporcionou uma faixa de resposta linear para o 4-nitrofenol de 0,1 a 100 μmol L-1 e bons parâmetros como limite de detecção, quantificação e sensibilidade de 0,03 μmol L-1, 0,1 μmol L-1 e 1,4×10-2 A mol L-1 respectivamente. Além disso, o sensor MIS/4-nitrofenol apresentou boa estabilidade com reprodutibilidade e precisão adequadas.

O Bisfenol A (BPA, acrônimo da língua inglesa - bisphenol A) é uma substância utilizada na fabricação de embalagens alimentícias e resinas odontológicas. Sua toxicidade deve-se ao fato de que, como disruptor endócrino, afeta o sistema reprodutor, cardiovascular, neuro-endócrino e pode apresentar potencial carcinogênico. Em métodos bioanalíticos, o preparo da amostra tem sido requerido para aumentar a seletividade e sensibilidade analítica, através da remoção dos interferentes da amostra biológica e concentração dos analitos, quase sempre presentes em níveis de traços. A microextração em ponteiras (DPX, acrônimo das iniciais em língua inglesa - Disposable Pipette Extraction), baseada no equilíbrio de sorção do soluto com a fase extratora, consiste em uma ponteira padrão de micropipeta modificada, na qual o sorvente está contido livremente entre dois filtros, permitindo rápida extração do analito em diferentes matrizes complexas. Os polímeros de impressão molecular (MIP acrônimo das iniciais em língua inglesa - Molecularly Imprinted Polymer) consistem em uma rede polimérica tridimensional que possui cavidades seletivas para o reconhecimento molecular do analito ou de substâncias de estrutura análoga. Essa rede polimérica é sintetizada ao redor da substância molde (analito), e a cavidade seletiva é formada após a remoção do molde. As vantagens do processo sol-gel para a síntese do MIP são o controle do tamanho e forma das partículas, ajuste da hidrofobicidade e alta estabilidade térmica. No presente trabalho, o MIP foi sintetizado e utilizado como sorvente para a técnica DPX para a determinação de bisfenol A em amostras de urina por cromatografia em fase gasosa acoplada à espectrometria de massas (GC-MS, acrônimo das iniciais em língua inglesa - Gas Chromatography coupled to Mass Spectrometry). O MIP foi sintetizado pela via sol-gel utilizando aminopropiltrietoxisilano (APTES) como mônomero funcional e tetraetil-orto-silicato (TEOS) como reagente de ligação cruzada. Como molde foram avaliados o BPA para o MIP, e o tetrabromobisfenol A (TBBPA) para o polímero molecularmente impresso com molécula análoga ao analito (DMIP, acrônimo das iniciais em língua inglesa - Dummy Molecularly Imprinted Polymer). Para avaliar a seletividade do MIP, o polímero não impresso (NIP, acrônimo das iniciais em língua inglesa - Non-imprinted Polymer) foi sintetizado seguindo o mesmo procedimento de síntese do MIP com exceção da adição da molécula molde. Apesar de a capacidade de sorção do MIP ser ligeiramente maior, o DMIP foi selecionado como sorvente para minimizar o efeito de memória. O DMIP foi caracterizado por microscopia eletrônica de varredura (MEV) e por espectroscopia vibracional na região do infravermelho por transformada de Fourier (FTIR, acrônico das inicias em língua inglesa - Fourier Transform Infrared). Os parâmetros da técnica DPX, tais como, o tempo de equilíbrio de sorção entre a amostra e o sorvente e condições de dessorção foram otimizadas por técnicas quimiométricas. A robustez do DMIP sintetizado via sol-gel foi comprovada pela reutilização deste sorvente por mais de 100 vezes, sem perda da eficiência da extração. O método desenvolvido DPX/GC-MS apresentou linearidade na faixa de 50 a 500 ng mL-1, precisão com CV (coeficientes de variação) entre 4 e 14% e de exatidão com valores de erro padrão relativo (EPR) de -13,6 a 12,3%. O método de referência utilizando a extração líquido-líquido e GC-MS (LLE/GC-MS), faixa de linearidade de 5 a 50 ng mL-1, foi desenvolvido e validado. Embora o método DPX/GC-MS inovador, quando comparado ao LLE/GC-MS, tenha apresentado maior limite de quantificação, apresentou as seguintes vantagens: simplicidade, rapidez e utilização de menores volumes de amostra e de solventes orgânicos na etapa do preparo da amostra / Bisphenol A (BPA) is widely used in food package and dental resins manufacturing. Its toxicity is due to its endocrine disruptor activity that affects the reproductive, cardiovascular, neurological system and may have carcinogenic potential. In bioanalytical methods the sample preparation has been required to increase the selectivity and analytical sensibility by removing the interfering from the biological matrix and concentration of the analytes that are in trace levels most of the times. The disposable pipette extraction (DPX) is based on sorption equilibrium of the analyte between the sample and the extraction phase. It consists in a pipette that contais the sorbent phase freely between two filters. Then, the extraction of the solute from the complex sample occurs quickly. Molecularly imprinted polymer is a tridimensional polimeric network that has selectivity cavities that can recognize an analyte or a substance with a similar structure. The polimeric network is synthesized around to a template molecule and after removing this template, a selective cavity is formed. The advantages of the sol-gel process for the synthesis of MIP are the control of the size and shape of the particles, hydrophobicity adjustment and high thermal stability. In the present study MIP was synthesized and used as sorbent to DPX method for determination of BPA in urine samples by gas chromatography coupled to mass spectrometry (GC-MS). Sol-gel methodoly was used to synthesize the polymers. Aminopropyltriethoxysilane (APTES) was used as a functional monomer and tetraethyl orthosilicate (TEOS) as crosslinking reagent. BPA and tetrabromobisphenol A (TBBPA) were evaluated as template to the synthesis of MIP and dummy molecularly imprinted polymer (DMIP) which is a molecularly imprinted polymer that uses a template structurally similar to the analyte. The non-imprinted polymer (NIP) was synthesized following the same procedure that MIP, except for the addition of template. It was made to verify the improvement of selectivity and sensibility of molecularly imprinted polymers. Although the sorption capacity of the MIP is slightly larger, DMIP has been selected as a sorbent in order to minimize the memory effect. The DMIP was characterized by Scanning Electron Microscopy (SEM) and Fourier Transform Infrared spectroscopy (FTIR). The parameters of DPX, such as time sorption equilibrium between the sample and the sorbent and desorption conditions were optimized by chemometrics. Robustness of DMIP sinthesized by sol-gel process was evidenciated for the reuse of DMIP for more than a 100 times. The developed method DPX/GC-MS showed linearity on the range from 50 to 500 ng ml-1, precision values with coefficient of variation (CV) betweeen 4 and 14% and accuracy with relative standard deviation values (RSD) from -13.6 to 12.3%. The reference method using liquid- liquid extraction and GC-MS (LLE/GC-MS) was developed and validated, showing linearity from 0.5 to 50 ng mL-1. Althout the innovative method DPX/GC-MS has showed limit of quantification larger than LLE/GC-MS, it presents the following advantages: simplicity, rapidy and utilization of smaller volumes of organic solvents on the sample preparation step

Les matériaux énergétiques résiduels de l’entraînement militaire peuvent être dommageables pour la santé publique et pour l’environnement. Des critères environnementaux existent pour chacun de ces contaminants qui doivent être respectés afin d’assurer la qualité des eaux et des sols. Ainsi, à proximité des bases militaires, leur concentration respective doit être constamment sondée afin de respecter ces limites. Cependant, comme les méthodes de mesure actuelles sont compliquées et longues, elles ne permettent pas de suivre réellement ces concentrations. L’intérêt envers des capteurs usant de résonance de plasmons de surface (SPR) a grandement crû au cours des dernières décennies grâce à leur haute sensibilité et la rapidité de mesure. Les liquides ioniques polymériques à empreinte moléculaire représentent une nouvelle classe de polymères prometteuse qui pourrait permettre une approche novatrice et adaptable pour l’extraction de contaminants organiques dans l’eau. Ces polymères combinent les propriétés extractrices des liquides ioniques et la sélectivité adaptable des polymères à empreinte moléculaire (MIP). Le monomère de liquide ionique peut être conçu pour obtenir des interactions optimales avec l’analyte. De plus, les MIPs ont l’avantage d’être hautement modulables : le simple changement de l’empreinte utilisée lors de sa polymérisation conduisant à une nouvelle sélectivité, d’où le potentiel prometteur de la méthode présentée. Différents MIPs à base de liquide ionique ont été utilisés pour fonctionnaliser des surfaces d’or pour tester, via la SPR, leur capacité à quantifier le cyclotriméthylènetrinitramine (RDX). Les résultats obtenus montrent que ces MIPs présentent un bon effet d’empreinte. Cependant, quelques problèmes persistent concernant la reproductibilité de la fonctionnalisation des surfaces d’or. Les résultats semblent toutefois montrer que cette combinaison de liquides ioniques polymériques à empreinte moléculaire avec l’analyse par SPR est une alternative prometteuse pour la détection et la quantification de contaminants présents en quantité dans l’ordre du picomolaire. / Energetic material residues from military training munition are potentially harmful and need to be constantly surveyed in order to never exceed the environmental criterion. Yet, current methods are tedious and fail to provide real-time concentration of these contaminants. Surface plasmon resonance (SPR) based sensors have gained high interest in the past decade due to their great sensitivity and the possibility of rapidly assessing samples. Molecularly imprinted polymeric ionic liquids are a promising new class of polymer that could bring a novel and adaptable approach for selective extraction of organics in water. They combine the ionic liquid’s extraction properties to molecularly imprinted polymer’s (MIP) tunable selectivity. The ionic liquid monomer is designed for optimal interaction with the energetic material, as its anion greatly affects he monomer’s solubility and interaction. Chemically, MIPs have the great advantage of being very versatile. In other words, changing the template is enough to modify the MIP’s selectivity. Hence, the potential of the method presented here is highly promising. Various molecularly imprinted polymeric ionic liquids grafted on gold thin films have been tested via SPR for the quantification of energetic materials. The results show that the molecularly imprinted polymers film displayed good imprinting effect. Yet there still are issues concerning the reproducibility of the gold’s surface functionalization. The results in the following experiments suggested that a combination of SPR sensing with molecularly imprinted polymeric ionic liquids is a promising alternative method for subnanomolar detection of energetic materials in aqueous media.

Cette thèse décrit la synthèse de nanoparticules de polymères à empreintes moléculaires (MIP, de l’anglais molecularly imprinted polymer) pour la reconnaissance de protéines, par une approche de synthèse en phase solide. Les polymères à empreintes moléculaires sont des récepteurs biomimétiques synthétisés sur mesure par un processus de nanomoulage du polymère autour de la molécule unique. Ils possèdent ainsi des cavités de reconnaissance spécifiques pour leur molécule cible. La technique de l'impression moléculaire pour les petites molécules cibles est bien établie, alors que l'impression de protéines reste encore un défi en raison de la flexibilité et complexité de leur structure native et de leurs nombreux sites fonctionnels, mais aussi en raison de leur faible stabilité dans des conditions inhabituelles. Par conséquent, une approche de synthèse en phase solide a été développée ici où la protéine est immobilisée sur un support avant la synthèse de nanoparticules hydrosolubles de MIP par polymérisation radicalaire. Les MIPs obtenus ont des affinités comparables à celles des anticorps, et des réactivités croisées faibles. Ils possèdent des avantages tels qu'une stabilité meilleure, un coût plus faible et peuvent potentiellement être régénérés et réutilisés, devenant ainsi des alternatives prometteuses aux anticorps naturels. Nous avons fabriqué des MIPs contre des protéases à sérine, telles la trypsine et la kallikréine, mais aussi contre un épitope peptidique de la protéine gp41 du VIH. Des nanogels de MIP thermosensibles ont été synthétisés dans un réacteur sous la forme d’une colonne thermostatée ou une boîte de Pétri, par polymérisation radicalaire initiée par voie thermique ou photochimique. Un simple changement de la température permet de libérer les MIPs de la protéine immobilisée. Ces MIPs sont hydrosolubles en fonction de la température et ont un diamètre inférieur à 100 nm. Leur affinité pour leur cible est élevée, avec un Kd du nano ou picomolaire. Ces 'anticorps synthétiques' ont été appliqués dans des tests d'adsorption sur microbalance à cristal de quartz, mais également comme 'chaperons synthétiques'. Des études préliminaires de la protection des protéines d'une dénaturation thermique ou par un pH défavorable ont été effectuées. L'utilisation d'un iniferter pour initier la photopolymérisation vivante du MIP a permis de synthétiser des nanogels de type core-shell. En introduisant des marqueurs fluorescents dans les MIPs, les tests d’immunoessai dans des fluides biologiques ont été démontrés, ce qui indique le grand potentiel de ces MIPs dans le diagnostic clinique. En conclusion, nous avons développé une nouvelle approche de synthèse de nanoparticules de MIP hydrosoluble ayant une haute affinité pour une protéine, utilisables à la place des anticorps dans des applications dans le monde réel tel que la détection de protéines biomarqueurs dans des échantillons complexes, et potentiellement comme principe actif in vivo. / This thesis describes the synthesis, by a solid-phase synthesis approach, of nanoparticles of molecularly imprinted polymers (MIPs) for the recognition of proteins. Molecularly imprinted polymers are biomimetic receptors synthesized by a nanomolding process of the polymer around single molecules. They therefore possess specific recognition cavities for their target molecule. The technique of molecular imprinting for small target molecules is well established, while protein imprinting remains a challenge due to the flexibility and complexity of their native structure and functional sites, but also because of their low stability under unusual conditions. Therefore, a solid-phase synthesis approach has been developed where the protein is immobilized on a support before the synthesis of water-soluble MIP nanogel particles by radical polymerization. The MIPs obtained have affinities comparable to those of antibodies, and low cross-reactivities. They have advantages such as better stability, lower cost, and can potentially be regenerated and reused, thus becoming promising alternatives to real antibodies. We have synthesized MIPs against serine proteases such as trypsin, and kallikrein, but also against a peptide epitope of the HIV gp41 protein. Thermosensitive MIP nanogels were synthesized in a thermostated column-type reactor or a petri dish, by thermally or photo-initiated radical polymerization. Their thermosensitivity allows the MIPs to be released from the immobilized protein by a simple temperature change. They are water-soluble as a function of temperature and have a diameter of less than 100 nm. Their affinity for their target is strong, with a Kd in the nano or picomolar range. These 'synthetic antibodies' have been applied in binding assays with quartz crystal microbalance, but also as 'synthetic chaperones'. Preliminary studies of the protection of proteins from thermal denaturation or from denaturation by an unfavorable pH have been carried out. The use of an iniferter to initiate the living photopolymerization of MIP made it possible to synthesize nanogels of core-shell type. By introducing fluorescent markers into MIPs, immunoassay applications in biological fluids have been demonstrated, indicating the great potential of these MIPs in clinical diagnostics. In conclusion, we have developed a novel approach to the synthesis of soluble MIP nanoparticles having high affinity for a protein, usable in place of antibodies in real world applications such as the detection of biomarker proteins in complex samples, and potentially as an active principle in vivo.

Dans cette thèse, nous avons démontré la faisabilité de la préparation de polymères à empreinte moléculaires (MIP) hautement sélectifs pour la reconnaissance dans des matrices aqueuses complexes avec des applications dans les cosmétiques et en technologie alimentaire. Les MIP (de l'anglais molecularly imprinted polymers) sont des récepteurs synthétiques comparables aux anticorps, qui sont synthétisés par co-polymérisation de monomères fonctionnels et réticulants en présence d'un gabarit moléculaire. Leurs propriétés de reconnaissance moléculaire, associées à leur grande stabilité, robustesse mécanique, faible coût et leur synthèse facile les rendent extrêmement intéressants comme matériaux de capture sélective, avec des applications dans les séparations analytiques, la détection et la vectorisation des médicaments. Cependant, leur reconnaissance sélective dans des milieux aqueux reste toujours problématique et c'est l'une des raisons de leur expansion commerciale restreinte. Dans une première partie, nous avons développé un MIP fonctionnant en milieu aqueux pour son application comme ingrédient actif dans un déodorant. Les odeurs corporelles sont principalement dues à des acides gras volatils générés à partir de leurs précurseurs, des conjugués de glutamine par des enzymes hydrolytiques produites à partir de bactéries présentes sur la peau. La plupart des anti-transpirants et des déodorants actuellement commercialisés contiennent des sels d'aluminium et des agents antibactériens non spécifiques, respectivement. Cependant, l'utilisation extrêmement étendue de ces produits nécessite des solutions alternatives en ce qui concerne divers problèmes (environnement, respect de l'écosystème de la peau, toxicité, etc.). Pour cette raison, un MIP a été synthétisé pour capturer les précurseurs conjugués de glutamine afin qu'ils ne soient plus disponibles aux bactéries, empêchant ainsi leur transformation en composés malodorants. Afin de générer des liaisons sélectifs dans des environnements aqueux, un monomère à base d'amidinium qui peut former une interaction électrostatique stoechiométrique forte avec les groupes carboxyle sur le gabarit moléculaire a été synthétisé. Le MIP, mélangé dans une formulation dermo-cosmétique, pourrait capter sélectivement les précurseurs conjugués de glutamine, au milieu d'une multitude d'autres molécules présentes dans la sueur humaine. En outre, le MIP n’affecte pas les bactéries de la peau, ouvrant la voie à des déodorants innovateurs de nouvelle génération, moins problématiques pour la santé. Dans une deuxième partie, nous avons développé une procédure rapide et efficace basée sur l'extraction en phase solide à empreinte moléculaire (MISPE) pour la purification sélective de la bétanine et de son stéréoisomère l’isobétanine à partir d'extraits de betterave. La bétanine est un pigment naturel ayant un fort pouvoir antioxydant et dont les propriétés pharmacologiques sont de plus en plus étudiées. Ce pigment est actuellement utilisé comme simple colorant alimentaire. Dans notre étude, l'acide dipicolinique a été utilisé comme gabarit moléculaire pour la synthèse de MIP, en raison de sa similarité structurelle avec le groupe chromophore de la bétanine. Les procédures MISPE ont été optimisées permettant l'élimination presque complète des glucides issus de la matrice végétale ainsi que la majorité des protéines, ce qui permet d'obtenir un rendement élevé d'extraction de la bétanine / isobétanine en une seule étape. De plus, toute la procédure d'extraction a été réalisée dans des solvants respectueux de l'environnement, tels que l'éthanol ou l'eau. Pour conclure, nous sommes convaincus que ce travail pave le chemin au développement d'une nouvelle génération des MIP fonctionnant en milieu aqueux avec des propriétés de reconnaissance améliorées dans des environnements complexes, qui pourra s'appliquer également à d'autres domaines biotechnologiques et biomédicaux. / In this thesis, we have demonstrated the feasibility of preparing highly selective molecularly imprinted polymers (MIPs) for recognition in complex aqueous matrices with applications in cosmetics and food technology. MIPs are synthetic tailor-made receptors, with binding affinities and specificities comparable to those of natural antibodies. Their molecular recognition properties, combined with their high stability, mechanical robustness, low cost and easy synthesis make them extremely attractive as selective capture materials with applications in analytical and preparative separations, sensing and drug delivery, among others. However, their selective recognition in aqueous samples still remains problematic and is one of the reasons for their so far lilited commercial expansion. In the first part, we developed a water compatible MIP for its application as an active ingredient in a deodorant. Body odors are mainly due to volatile fatty acids generated from their glutamine conjugate precursors by hydrolytic enzymes from bacteria present on the skin. Most currently marketed anti-perspirants and deodorants contain, respectively aluminum salts and unspecific antibacterials. However, the extremely wide use of these products requires alternative solutions with regard to various problems (environmental, respect of skin ecosystem, toxicity, etc.). For this reason, a MIP was developed to capture the glutamine conjugate precursors so that they are no longer available to the bacteria, thus preventing their transformation to malodorous compounds. In order to generate binding selectivity in aqueous environments, an amidinium-based monomer which can form a strong stoichiometric electrostatic interaction with the carboxyl groups on the template, was synthesized. The MIP, blended in a dermo-cosmetic formulation, could capture selectively the glutamine precursors, amidst a multitude of other molecules present in human sweat. Furthermore, the MIP did not affect the skin bacteria, paving the way to an innovative and 'safer ' future-generation deodorant. In the second part, we developed a fast and efficient procedure based on molecularly imprinted solid­ phase extraction (MISPE) for the selective clean-up of betanin and its stereoisomer isobetanin from red beetroot extracts. Betanin is a natural pigment with significant antioxidant and biological activities currently used as food colorant. Dipicolinic acid was used as template for the MIP synthesis, because of its structural similarity to the chromophore group of betanin The MISPE procedures were optimized allowing the almost complete removal of carbohydrates and the majority of proteins, resulting in high extraction recovery of betanin / isobetanin in a single step. Moreover, the whole extraction procedure was performed in environmentally friendly solvents with either ethanol or water. To conclude, we believe that this study paves the way towards the development of a new generation of water compatible MIPs with improved recognition properties in highly complex aqueous environments, and should be applicable to other biotechnological and biomedical areas as well.

Measuring urinary tobacco specific nitrosamine 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanol (NNAL) and its glucuronide conjugate may provide the best biomarker of tobacco smoke lung carcinogen metabolism. Existence of differences in the extent of NNAL metabolism rates may be potentially related to an individuals’ lung cancer susceptibility. Low concentrations of NNAL in smokers urine (<1 ng/mL) require sensitive and selective methods for analysis. Traditionally, this involves extensive, time-consuming sample preparation that limits throughput and adds to measurement variability. Molecularly imprinted polymers (MIPs) have been developed for the analysis of urinary NNAL by offline cartridge extraction combined with LC-MS/MS. This method when reproduced demonstrated problems with matrix effects. In the first part of this work, investigation of matrix effects and related problems with sensitivity for the published offline extraction method has been conducted. In order to address the need to improve throughput and other analytical figures of merit for the original method, the second part of this work deals with development of a high-throughput online microfluidic method using capillary-columns packed with MIP beads for the analysis of urinary NNAL. The method was validated as per the FDA guidance, and enabled low volume, rapid analysis of urinary NNAL by direct injection on a microfluidic column packed with NNAL specific MIP beads. The method was used for analysis of urinary NNAL and NNAL-Gluc in smokers. Chemometric methods were used with this data to develop a potential cancer-risk-assessment tool based on pattern recognition in the concentrations of these compounds in urine. In the last part, method comparison approaches for the online and the offline sample extraction techniques were investigated. A ‘fixed’ range acceptance criterion based on combined considerations of method precision and accuracy, and the FDA bioanalytical guidance limits on precision and accuracy was proposed. Data simulations studies to evaluate the probabilities of successful transfers using the proposed criteria were performed. Various experimental designs were evaluated and a design comprised of 3 runs with 3 replicates each with an acceptance range of ±20% was found appropriate. The off-line and the on-line sample extraction methods for NNAL analysis were found comparable using the proposed fixed range acceptance criteria.

L’objectif de cette thèse a consisté en la synthèse d’un polymère à empreinte moléculaire (MIP) permettant l’extraction du phosmet, un pesticide organophosphoré largement utilisé en oléiculture. La recherche du monomère fonctionnel (MF) disposant de la meilleure capacité à interagir de manière non-covalente avec le phosmet en présence du solvant porogène le plus approprié a été réalisée pour la toute première fois au moyen d’un capteur à acétylcholinestérase. Cette stratégie innovante a permis une meilleure compréhension des mécanismes cinétiques à l’œuvre lors de l’interaction MF-molécule cible. De par l’importance de son rôle dans la détermination de la structure d’un MIP, le choix d’un agent réticulant aux caractéristiques physico-chimiques adéquates a permis de sélectionner le meilleur MIP en s’appuyant sur l’étude des isothermes d’adsorption selon les modèles de Freundlich et Langmuir. La procédure d’extraction du phosmet selon la procédure MISPE (Molecularly Imprinted Solid Phase Extraction) a été effectuée par le biais d’une cartouche SPE dont la capacité a été évaluée à partir d’une solution standard. La validation du choix des réactifs de MIP sélectionnés a été confortée par la réalisation d’une expérience de réactivité croisée appliquée à une molécule analogue au phosmet. L’extraction du phosmet de l’huile d’olive a pu être effectuée avec succès selon un protocole d’extraction en flux inverse optimisé. Cette étude ouvre ainsi la voie à la recherche de nouvelles interactions MFs-molécules cibles au moyen de biocapteurs enzymatiques inhibant des composés toxiques tels que les herbicides, fongicides et autres pesticides. / The objective of this thesis has been the synthesis of a molecularly imprinted polymer (MIP) for the extraction of phosmet, an organophosphorus pesticide widely used in olive growing. The search for the functional monomer (FM) having the best ability to interact non-covalently with phosmet in the presence of the most suitable pore-forming solvent was carried out for the first time by means of an acetylcholinesterase sensor. This innovative strategy allowed us to better understand the kinetic mechanisms of FM-template interaction. Because of the importance of its role in determining the structure of a MIP, the selection of a crosslinking agent with adequate physicochemical characteristics made it possible to select the best MIP, whose adsorption isotherms were studied according to Freundlich and Langmuir models. Extraction of phosmet using a Molecularly Imprinted Solid Phase Extraction (MISPE) procedure was carried out via an SPE cartridge, whose capacity was evaluated from a standard solution. The choice of reagents and experimental conditions were validated by carrying out selectivity assays using another organophosphorus insecticide. Extraction of phosmet from olive oil was successfully carried out according to an optimized reverse flow extraction protocol. This work opens new opportunities for studying new FM-template interactions by means of enzymatic biosensors capable of detecting other inhibitors such as herbicides, fungicides and other pesticides.

O preparo da amostra é uma das etapas mais importantes em toda a análise química. O isolamento e a concentração dos componentes da amostra são cruciais e busca-se sempre que essas etapas sejam as mais simples e consumam o mínimo possível de tempo e reagentes. Nos últimos anos, um tipo de material tem se mostrado bastante útil para análises químicas a partir de fluidos biológicos, os polímeros molecularmente impressos (MIPs). Os MIPs são sintetizados por reações de polimerização, na presença de uma molécula molde (template). A molécula molde se liga aos monômeros funcionais do polímero durante a reação de polimerização e permanece ligada à superfície das cadeias poliméricas quando a reação se completa. Terminada a polimerização, realiza-se a completa lavagem das moléculas molde, assim, restam na superfície polimérica cavidades tridimensionais complementares à molécula empregada como molde. Essas cavidades permitem a ligação reversível e preferencial da molécula molde ou outras com estrutura química semelhante. A Cannabis sativa é a droga ilícita mais consumida em todo o mundo e nos últimos anos muita atenção tem se voltado a seus efeitos toxicológicos no corpo humano e a aplicações medicinais. Nesta dissertação, foi sintetizado um MIP com a molécula molde catequina para a extração e posterior análise por LC-MS/MS dos canabinóides &Delta;9-tetrahidrocanabinol (THC), 11-hidroxi-&Delta;9-tetrahidrocannabinol (THC-OH) e 11-nor-&Delta;9-tetrahidrocannabinol-9-ácido carboxílico (THC-COOH) em amostras de urina. O MIP produzido foi empacotado em microdispositivo e empregado no preparo das amostras de urina por microextração por sorvente empacotado (MEPS). O método desenvolvido apresentou boa linearidade (valores de r de 0,977 para o THC e 0,994 para THC-OH e THC-COOH). Os limites de detecção e de quantificação foram respectivamente de 5 ng mL-1 e 20 ng mL-1, para os compostos THC e THC-OH, na faixa linear de 25 a 250 ng mL-1. Para o composto THC-COOH os limites de detecção e quantificação alcançados foram de 1 ng mL-1 e 5 ng mL-1, respectivamente, na faixa linear de 5 a 170 ng mL-1. O método apresentou valores razoáveis de precisão entre 3,2% (THC-COOH) e 25,1% (THC) e de exatidão, que variou entre -18,4 e 17,4 (ambos para o THC). O MIP empregado no preparo da amostra mostrou-se mais seletivo e específico do que materiais normalmente empregados para a extração dos canabinoides das amostras de urina, além de a técnica de extração por MEPS apresentar baixo consumo de solventes e amostra para a extração dos analitos e posterior análise por LC-MS/MS. / The sample preparation is one of the most important steps in every chemical analysis. The isolation and concentration of the sample components are crucial and it is always sought that these steps are simple and consume the lowest amount of time and reagents. In the recent years, a type of material has proved to be very useful for chemical analyzes of biological fluids, the molecularly imprinted polymers (MIPs). MIPs are synthesized by polymerization reactions in the presence of a template molecule. The template molecule binds to the functional monomers of the polymer during the polymerization reaction and remains bonded to the surface of the polymeric chains after the reaction is complete. After the polymerization is finished, the complete washing of the template molecules is carried out, thus, three-dimensional cavities, complementary to the molecule used as a template, remain on the polymer surface. These cavities allow the reversible and preferential bonding of the template molecule or others with similar chemical structure. Cannabis sativa is the most commonly consumed illicit drug in the world and in recent years much attention has focused on its toxicological effects on human body and for medical applications. In this master dissertation, a MIP was synthesized with the catechin molecule as template, for extraction and subsequent analysis by LC-MS/MS of the cannabinoids &Delta;9-tetrahydrocannabinol (THC), 11-hydroxy-&Delta;9-tetrahydrocannabinol (THC-OH), and 11-nor-&Delta;9-tetrahydrocannabinol-9-carboxylic acid (THC-COOH) in urine samples. The MIP produced was packed in a microdevice and used in the preparation of the urine samples by microextraction by packed sorbent (MEPS). The developed method showed good linearity (r values of 0.977 for THC and 0.994 for THC-OH and THC-COOH). The detection and quantification limits were respectively 5 ng mL-1 and 20 ng mL-1 for THC and THC-OH in the linear range from 25 to 250 ng mL-1. For the compound THC-COOH the limits of detection and quantification achieved were 1 ng mL-1 and 5 ng mL-1, respectively, in the linear range from 5 to 170 ng mL-1. The method presented reasonable values of precision, between 3.2% (for THC-COOH) and 25.1% (for THC) and displayed accuracy ranging from -18.4 to 17.4 (both for THC). The MIP used in the sample preparation was more selective and specific than other materials usually employed for the extraction of the cannabinoids from the urine samples. The MEPS technique also showed low consumption of solvents and sample for sample preparation, extraction of analytes and subsequent analysis by LC-MS/MS.