Les poly (3-hydroxyalcanoate)s (PHAs) constituent une solution alternative aux plastiques issus des ressources pétrolières en raison de leur biodégradabilité et leur biocompatibilité. Cependant, les coûts de production élevés et les difficultés de mise en œuvre des PHAs ont limité leur développement à plus grande échelle. Il convient donc de modifier les PHAs afin d’accroître leurs propriétés et de développer des stratégies permettant de réduire leurs coûts de production pour permettre leur utilisation en remplacement des plastiques conventionnels. Parmi les matières premières issues des ressources renouvelables, les huiles métropolitaines de colza ou de tournesol sont des candidats intéressants pour la synthèse et la modification chimique des PHAs de par leur coût compétitif, leur biodisponibilité et leurs fonctionnalités intrinsèques. Ainsi, notre travail a porté sur réduction des coûts de production des PHAs en utilisant des substrats tels que l’huile de colza ou le glycérol. La souche sélectionnée, Haloferax mediterranei, a démontré sa capacité à biosynthétiser du PHB92HV8. Par ailleurs, nous avons développé deux approches permettant d’améliorer les performances des PHAs : la plastification par des molécules terpéniques issues des plantes et la synthèse de réseaux semi-interpénétrés (semi-IPNs) par réaction de thiolène entre l’huile de tournesol et un thiol trifonctionnel au sein d’une matrice de PHAs linéaire. L’utilisation de terpènes pour la formulation des PHAs a permis de réduire la température de mise en œuvre du polymère de 7 °C et d’augmenter sa souplesse. La synthèse d’un réseau semi-interpénétré biosourcé a permis d’améliorer la stabilité thermique des PHAs et d’augmenter leur allongement à la rupture de 2400 %. Enfin, de nouveaux matériaux biosourcés ont également été produits à partir de terpènes et d’huiles végétales, en faisant appel à un procédé simple et vert. Les matériaux obtenus, aux propriétés intéressantes en termes de flexibilité et d’élasticité ont la capacité de piéger et de libérer des molécules hydrophobes telle que la molécule d’eugénol aux propriétés antibactériennes et antifongiques. Ainsi, une large gamme de bioplastiques a été synthétisée en valorisant les huiles végétales et les PHAs, dont les propriétés variées pourraient concurrencer les plastiques actuels issus des ressources fossiles / Poly (3-hydroxyalkanoate)s (PHAs) are an alternative to petroleum-based plastics because of their biodegradability and their biocompatibility. However, the high production costs, the limited mechanical performance and the narrow processing window of PHAs have limited their development on a larger scale. It is therefore necessary to modify the PHAs in order to increase their properties and develop strategies to reduce their production costs to allow their use as replacement for conventional plastics. Among the raw materials derived from renewable resources, metropolitan rapeseed or sunflower oils are interesting candidates for the synthesis and chemical modification of PHAs because of their competitive cost, their bioavailability and their built-in functionalities. Thus, we aimed to reduce the cost productions of PHAs by using rapeseed oil and glycerol as cheap substrates. The strain, Haloferax mediterranei, has demonstrated its ability to biosynthesize a PHB92HV8. In addition, we have developed two approaches to improve the performance of PHAs: plasticization of PHAs by terpene molecules from plants and synthesis of semi-interpenetrating networks (semi-IPNs). The use of terpenes for the formulation of PHAs reduced the processing temperature of the polymer and increased its flexibility. The synthesis of a biobased semi-IPN is obtained by crosslinking sunflower oil and a trifunctional thiol, using the thiolene reaction, within a matrix of linear PHAs. The network improved the thermal stability of PHAs and increased their elongation at break of 2400%. Finally, new biobased materials were also produced from terpenes and vegetable oil, using a simple and "green" process. The resulting materials exhibited flexibility and elasticity with the ability to absorb and to release antibacterial and antifungal hydrophobic molecules such as the eugenol. Therefore, a wide range of bioplastics have been synthesized using vegetable oils, PHAs or a combination of both, with wide range of properties to compete with plastics derived from fossil resources

Thèse de doctorat : Chimie : Strasbourg 1 : 2007. / Thèse soutenue sur un ensemble de travaux. Titre provenant de l'écran-titre. Bibliogr. p. 210-232.

Les matériaux polymères ont de nombreux avantages comme la légèreté, le coût, la formabilité… mais sont aussi à l’origine de certains problèmes environnementaux actuels. La substitution des polymères conventionnels d’origine pétrochimique et non biodégradables par des polymères biosourcés et biodégradables tels que le polylactide (PLA) ou les polyhydroxyalcanoates (PHA) peut apparaître comme une alternative crédible. Cependant, un des freins à leur développement demeure la faible connaissance de la durée de vie de ces biopolymères lorsqu’ils sont exposés à différents types d’environnements, en particulier en milieu marin si l’on considère une application marine. Dans le cadre de cette étude, il a donc été entrepris de suivre le vieillissement naturel et le vieillissement accéléré du PLA et des PHA en milieu marin dans l’objectif d’appréhender les mécanismes et les cinétiques de dégradation. Dans le but de découpler les effets liés à l’eau, aux sels minéraux et aux microorganismes, les échantillons ont été immergés dans différentes conditions, i.e. en eau distillée, en eau de mer naturelle et en eau de mer filtrée et renouvelée à différentes températures. L’influence du milieu sur la dégradation de ces biopolymères est analysée et discutée, de même que l’influence de la géométrie des pièces (films de différentes épaisseurs, éprouvettes ou fibres). Enfin, la prédiction de la durée de vie de ces polymères a été envisagée par l’intermédiaire de deux approches, conduisant à une estimation de leur durabilité dans un milieu bien défini et au regard d’une propriété donnée. / Pollution of nature by plastics is a major environmental problem and better management of the lifetime of polymers is a major challenge for the future. In recent years, bio-based and biodegradable polymers, such as polylactide (PLA), or polyhydroxyalkanoates (PHA) have appeared as an alternative solution in order to solve these problems. One of the limits remains the relative lack of knowledge of their lifetime and degradation behaviour in aqueous environments, and more specifically in the marine environment. In this study natural and accelerated ageing tests were performed under several conditions, distilled water, filtered and renewed seawater and natural seawater, at different temperatures, in order to decouple enzymatic and hydrolytic mechanisms. The aim of this study is to establish a baseline on degradation mechanisms and kinetics, in order to make lifetime predictions of biopolymer behaviour in seawater.Degradation phenomena have been identified. Biodegradation tests were also performed in a marine environment by following the release of CO2. Then, lifetime predictions of the properties of these biopolymers at seawater temperature were made using two different approaches.

This diploma thesis deals with identification of bacteria which are capable of producing polyhydroxyalkanoates (PHAs). Work included testing variety of genera including Pseudomonas, Lactobacillus, Bifidobacterium, thermophilic cultures and samples gathered from natural sources. Bacteria were investigated by molecular technique polymerase chain reaction – PCR. An amplification of the PHA synthase gene (phaC) was analyzed. In the first reaction phaC and 16S rRNA genes were tested at the same time. 16S rRNA gene is used as control for bacterial DNA and as an identification tool for natural source samples. This multiplex PCR used multiple primers in PCR mix. Second reaction search for amplicon specific for catalysing biosynthesis mcl-PHA (phaC1). The presence of the PHA synthase gene was verified in 11 samples which were Bifidobacterium breve CCM 7825T, Lactobacillus rhamnosus CCM 1825T, Lactobacillus zeae CCM 7069T, Lactobacillus delbrueckii subsp. bulgaricus CCM 7190T, Lactobacillus plantarum CCM 7039T, Pseudomonas gessardii, Pseudomonas fulva, Arthrobacter protophormiae, Curtobacterium flaccumfaciens, Mycobacterium neoaurum and Staphylococcus lentus.

Burkholderia sacchari é uma nova espécie bacteriana do solo brasileiro que tem a capacidade de crescer em sacarose e acumular grânulos intracelulares de poliésteres pertencentes à família dos polihidroxiaIcanoatos (PHA). Quando cultivado em sacarose, o homopolímero poli-3¬hidroxibutirato é acumulado por esta bactéria, que é usado como um plástico biodegradável e biocompatível. Quando sacarose e ácido propiônico são fornecidos como fontes de carbono, as células de B. sacchari acumulam o copolímero poli-3-hidroxibutirato-co-3-hidroxivalerato (P3HB-co-3HV). Entretanto, uma pequena porcentagem do ácido propiônico fornecido é convertido a unidades 3HV devido à eficientes vias catabólicas que convertem este substrato preferencialmente a biomassa, CO2 e água, reduzindo portanto a eficiência da produção do polímero. Ao menos duas vias do catabolismo de propionato foram previamente propostas em B. sacchari: a-oxidação e ciclo do 2-metilcitrato (2MCC), sendo somente a última confilmada no nível molecular. Mutantes UV, obtidos anteriormente, foram incapazes de crescer em propionato (prp) e também apresentaram fenótipo afetado no crescimento em intermediários da a-oxidação. No presente trabalho, após uma busca em bibliotecas genômicas de B. sacchari, uma delas construída também no presente trabalho, três diferentes fragmentos de DNA presentes nos clones AI, PI e P2 foram capazes de restaurar o fenótipo prp+ aos mutantes. Experimentos quantitativos revelaram que AI somente restaurou parcialmente a conversão de propionato a unidades 3HV aos mutantes. PI foi capaz de restaurar a capacidade de crescimento em propionato, e em outros intermediários da a-oxidação, a um dos mutantes. Um DNA de 1.2 Kb, subfragmento de PI, ainda capaz de complementar mutantes prp, foi subclonado e seqüenciado, demonstrando similaridade a seqüências de DNA codificadoras de reguladores transcricionais do tipo LysR de várias bactérias, incluindo espécies de Bllrkholderia. Regiões adjacentes a LysR em diferentes genomas de Burkholderia são anotados como codificadores de acil-CoA desidrogenases, ao lado de proposta acil-CoA transferases/carnitina desidrogenases e de uma permease do facilitador maior da superfamília MFS-l. Após confirmação das mesmas regiões adjacentes em B. sacchari e também a sua específica deleção, será possível provar a presença da via do catabolismo de propionato indicada neste trabalho. / Burkholderia sacchari is a new bacterial species from brazilian soil, able to grow in sucrose, accumulating intracellular granules of polyester belonging to the polyhydroxyalkanoate family (PHA). When cultivated on sucrose, the homopolymer poly-3-hydroxybutyrate is accumulated by this bacterium, which is used as biodegradable and biocompatible plastic. When sucrose and propionic acid are supplied as carbon sources, B. sacchari cells accumulate the copolymer poly-3-hydroxybutyrate-co-3-hydroxyvalerate (P3HB-co-3HV). However, a small percentage ofthe propionic acid supplied is converted to 3HV units, because efficient catabolic pathways convert this substrate preferentially to biomass, CO2 and water, thus reducing the efficiency of polymer production. At least two propionate catabolic pathways have been previously indicated in B. sacchari: a-oxidation and the 2-methylcitric acid (2MCC), the latter confirmed at molecular leveI. UV mutants previously obtained were unable to grow in propionate (prp) and also showed the phenotype affected concerning grow on intermediates of propionate a-oxidation. In the present work, after a screening in B. sacchari genomic libraries, one ofthem constructed also in the present work, the prp + phenotype was restored to the mutants by three different DNA fragments harbored by dones A), PI and P2. Quantitative experiments revealed that AI restored only partially the quantitative conversion of propionate to 3HV units to the mutants. PI restored the ability to grow in propionate and in other intermediates of a-oxidation to one prp mutant. A DNA 1.2 Kb subfragment of PI, still able to complement prp mutants, was subcloned and sequenced, showing similarity to DNA sequences encoding to LysR-type transcriptional regulators of various bacteria, including BlIrkholderia species. Adjacent regions to LysR in different genomes of BlIrkholderia are annotated as encoding to acyl-CoA dehydrogenases, neighboring a predicted acyl-CoA transferases/carnitine dehydratase and a permease ofthe major facilitator superfamily MFS-1. After confirmation ofthe same adjacent regions in B. sacchari and also their especific deletion, it will be possible to prove the presence of the pathway indicated here in the catabolism of propionate.

Burkholderia sacchari é uma nova espécie bacteriana do solo brasileiro que tem a capacidade de crescer em sacarose e acumular grânulos intracelulares de poliésteres pertencentes à família dos polihidroxiaIcanoatos (PHA). Quando cultivado em sacarose, o homopolímero poli-3¬hidroxibutirato é acumulado por esta bactéria, que é usado como um plástico biodegradável e biocompatível. Quando sacarose e ácido propiônico são fornecidos como fontes de carbono, as células de B. sacchari acumulam o copolímero poli-3-hidroxibutirato-co-3-hidroxivalerato (P3HB-co-3HV). Entretanto, uma pequena porcentagem do ácido propiônico fornecido é convertido a unidades 3HV devido à eficientes vias catabólicas que convertem este substrato preferencialmente a biomassa, CO2 e água, reduzindo portanto a eficiência da produção do polímero. Ao menos duas vias do catabolismo de propionato foram previamente propostas em B. sacchari: a-oxidação e ciclo do 2-metilcitrato (2MCC), sendo somente a última confilmada no nível molecular. Mutantes UV, obtidos anteriormente, foram incapazes de crescer em propionato (prp) e também apresentaram fenótipo afetado no crescimento em intermediários da a-oxidação. No presente trabalho, após uma busca em bibliotecas genômicas de B. sacchari, uma delas construída também no presente trabalho, três diferentes fragmentos de DNA presentes nos clones AI, PI e P2 foram capazes de restaurar o fenótipo prp+ aos mutantes. Experimentos quantitativos revelaram que AI somente restaurou parcialmente a conversão de propionato a unidades 3HV aos mutantes. PI foi capaz de restaurar a capacidade de crescimento em propionato, e em outros intermediários da a-oxidação, a um dos mutantes. Um DNA de 1.2 Kb, subfragmento de PI, ainda capaz de complementar mutantes prp, foi subclonado e seqüenciado, demonstrando similaridade a seqüências de DNA codificadoras de reguladores transcricionais do tipo LysR de várias bactérias, incluindo espécies de Bllrkholderia. Regiões adjacentes a LysR em diferentes genomas de Burkholderia são anotados como codificadores de acil-CoA desidrogenases, ao lado de proposta acil-CoA transferases/carnitina desidrogenases e de uma permease do facilitador maior da superfamília MFS-l. Após confirmação das mesmas regiões adjacentes em B. sacchari e também a sua específica deleção, será possível provar a presença da via do catabolismo de propionato indicada neste trabalho. / Burkholderia sacchari is a new bacterial species from brazilian soil, able to grow in sucrose, accumulating intracellular granules of polyester belonging to the polyhydroxyalkanoate family (PHA). When cultivated on sucrose, the homopolymer poly-3-hydroxybutyrate is accumulated by this bacterium, which is used as biodegradable and biocompatible plastic. When sucrose and propionic acid are supplied as carbon sources, B. sacchari cells accumulate the copolymer poly-3-hydroxybutyrate-co-3-hydroxyvalerate (P3HB-co-3HV). However, a small percentage ofthe propionic acid supplied is converted to 3HV units, because efficient catabolic pathways convert this substrate preferentially to biomass, CO2 and water, thus reducing the efficiency of polymer production. At least two propionate catabolic pathways have been previously indicated in B. sacchari: a-oxidation and the 2-methylcitric acid (2MCC), the latter confirmed at molecular leveI. UV mutants previously obtained were unable to grow in propionate (prp) and also showed the phenotype affected concerning grow on intermediates of propionate a-oxidation. In the present work, after a screening in B. sacchari genomic libraries, one ofthem constructed also in the present work, the prp + phenotype was restored to the mutants by three different DNA fragments harbored by dones A), PI and P2. Quantitative experiments revealed that AI restored only partially the quantitative conversion of propionate to 3HV units to the mutants. PI restored the ability to grow in propionate and in other intermediates of a-oxidation to one prp mutant. A DNA 1.2 Kb subfragment of PI, still able to complement prp mutants, was subcloned and sequenced, showing similarity to DNA sequences encoding to LysR-type transcriptional regulators of various bacteria, including BlIrkholderia species. Adjacent regions to LysR in different genomes of BlIrkholderia are annotated as encoding to acyl-CoA dehydrogenases, neighboring a predicted acyl-CoA transferases/carnitine dehydratase and a permease ofthe major facilitator superfamily MFS-1. After confirmation ofthe same adjacent regions in B. sacchari and also their especific deletion, it will be possible to prove the presence of the pathway indicated here in the catabolism of propionate.

Le milieu marin constitue la plus grande partie de la biosphère et contient les formes les plus anciennes et les plus variées de la vie. Les espèces microbiennes, relativement négligées jusqu’à présent, pourraient bien être le principal gisement de nouvelles molécules des prochaines décennies grâce à leurs adaptations à un environnement marin atypique et/ou à des conditions extrêmes (zones hydrothermales, sédiments des fonds sous-marins, lagunes hyper-salines, continent arctique et antarctique, tapis microbiens…). La Nouvelle-Calédonie est dotée de milieux naturels littoraux, côtiers et marins au sein desquels existent des gradients thermiques, d’hypersalure/dessalure, de chocs UV, de pH, d’évaporation, d’inondation/exondation… qui déterminent des habitats atypiques dans lesquels les micro-organismes doivent développer des stratégies adaptatives et de défense potentiellement uniques. Un travail de bioprospection de ces milieux atypiques a ainsi permis la création d’une souchothèque riche à ce jour de 771 isolats bactériens néo-calédoniens. Sur la base de cette collection, des études ont été engagées pour la recherche et la caractérisation de biopolymères de type exopolysaccharides (EPS) et polyhydroxyalcanoates (PHA). Les EPS sont des complexes osidiques de grande taille dont la composition est variable selon l’organisme producteur. Les PHAs sont des macromolécules formées de liaisons ester présentant de fortes similitudes avec les plastiques issues de la pétrochimie mais sont totalement biodégradables et biocompatibles. Les débouchés pour la valorisation des biopolymères marins sont très variés et touche plusieurs secteurs comme la cosmétique (gélifiant épaississant, antirides, etc.) la santé (immunostimulation, anticoagulant, cicatrisant), l’agroalimentaire, la bioremédiation les emballages, l’enrobage… Les criblages réalisés sur l’ensemble de la collection pour les deux types de polymères ont permis de mettre en évidence qu’une part importante des souches de la collection étaient potentiellement capables de sécréter ces polymères. À l’heure actuelle, 10 types d’EPS et 5 types de PHAs ont été produits et caractérisés afin de cibler des domaines d’applications. L’étude des bactéries marines pour leur faculté à produire des polymères est donc un secteur en pleine expansion et les premiers résultats montrent que ce type de biotechnologies pourrait constituer une perspective de développement intéressante pour la Nouvelle-Calédonie. / Previous works on marine bacteria led to the discovery of molecules of great biotechnological interest. Under unusual physical and chemical conditions some microorganisms have developed various survival strategies including exopolysaccharides (EPS) and Poly-3-hydroxyalkanoates (PHAs) production. Due to their many interesting biological, physical and chemical properties, those polymers have found applications in many industrial sectors. Due to interesting physical and chemical properties, EPS can find applications in many industrial sectors including the food industry, cosmetics, for oil and metal recovery from industrial waste and in the mining industry as well. During the last decades EPS have also been demonstrated as interesting bioactive molecules with many applications for human health. PHAs are biopolyesters accumulated as granules in bacteria in order to endure long starving periods. Those biodegradable biopolymers can be used as an alternative to petroleum derived polymers and can be produced from renewable carbon sources. PHAs exhibit a wide variety of properties and structures depending of the carbon source available and the microorganism used for the production. New Caledonia (NC) is frequently referred as a hotspot biodiversity. During a prospection campaign performed in different marine costal ecosystems of NC, a great number (770) of bacteria were isolated from different locations. Screening showed that 55% of the isolates were able to produce under lab conditions EPS and 53% to produce PHA. Partial chemical characterization was performed on purified samples using colorimetric methods, infrared spectrometry (FTIR), gas chromatography (GC) and nuclear magnetic resonance (NMR). Marine bacteria from New Caledonian ecosystems were shown to produce EPS with unusual chemical composition with potential applications in cosmetics. Preliminary experiments also showed high metal-binding capacity with applications in bioremediation. Different PHAs were also produced using different types of sugars and oil as renewable resources. Blue biotechnologies can have various applications in many industrial sectors (Health, food industry, environment, cosmetics etc…) and there is a great international demand for new molecules issue from marine areas. New Caledonian marine bacteria have proved their capacity for producing innovative biopolymers with a wide range of application that can be valuating in on short time period (environment, cosmetics) or at long time (pharmaceutics, surgeries). These applications are promising in order to develop

L'étude porte sur la caractérisation des propriétés mécaniques des matériaux polymères et notamment d'un grade d'une famille de matériaux biodégradables et biosourcés : les PolyHydroxyAlcanoates (PHAs). Afin d'étudier ce matériau, un montage expérimental original a été mis en place pour des essais multiaxiaux sur une géométrie unique d'éprouvettes cylindriques. Celui-ci permet d'effectuer des cycles de sollicitations successives et/ou simultanées de traction-compression-torsion. L'objectif est de pouvoir effectuer des chemins complexes, avec changements de direction et cycles au cours d'un même essai, permettant ainsi d'explorer tout le plan déviatoire de déformation avec prise en compte de l'histoire du chargement. De nombreux essais ont été effectués sur le grade de PHA à différentes températures pour développer une base de données expérimentale servant à l'identification d'un modèle de comportement proposé d'Hyperélasto-Visco-Hystérésis (HVH). La méthodologie d'identification des paramètres matériaux est suffisamment simple pour être étendue à une large variété de polymères. Cette identification met particulièrement en évidence les faiblesses et les qualités du modèle. Pour le PHA étudié, la base expérimentale montre ainsi l'insuffisance de la partie visqueuse du modèle, contrairement aux travaux antérieurs utilisant des essais classiques unidirectionnels. Néanmoins, le modèle HVH fournit des réponses précises pour les composantes hyperélastique et hystérétique non-visqueuse dans la gamme [0-100]°C. Cette loi a pour but d'être utilisée pour vérifier la tenue mécanique en statique et en dynamique de structures dans le domaine de l'emballage alimentaire en PHA. / This study deals with the mechanical properties characterization of polymers. One of the studied polymers is part of a biodegradable and biobased family of materials: the PolyHydroxyAlkanoates (PHAs). In order to study its behavior, an original setup has been designed to perform tests with multiaxial loadings on a unique cylindric specimen. It allows to carry out multiple cycles of loadings mixing tensile, compression and torsion. The goal is to be able to perform complex deformation paths with changes in the deformation direction and cycles in a single test. These possibilities allows to scan the deviatoric subspace of deformations with the consideration of the loading history. Many tests has been carried out on the PHA polymer at different temperatures to develop a database used for the identification of a Hyperelasto-Visco-Hysteresis constitutive model. The methodology identification of the mechanical parameters is simple enough to be extend at a large variety of polymers. This identification points out the model weaknesses and qualities. For the studied PHA, the experimental data shows the viscous contribution insufficiency in the constitutive model, unlike previous studies using uniaxial classical tests. Nevertheless, the HVH model gives precise predictions for hyperelastic and non-viscous hysteresis components in the range of [0-100]°C. The constitutive law has been developed in order to check the strength of structures behavior in static and dynamic in the field of food packaging in PHA.

The aim of this work was study of the detoxification of lignocellulose material hydrolysates and to investigate sawdust suitability as a substrate for microbial production of PHA by bacteria Burkholderia cepacia and Burkholderia sacchari. In the experimental part of the work the most suitable way of detoxification of model and real hydrolysate was studied. After that, detoxification methods used were evaluated. Criteria for evaluation were concentration of polyphenols as the most important microbial inhibitors and reduction saccharides as the main carbon substrate. Furthermore, fermentability of the hydrolysates was also tested by cultivation of two bacteria capable of PHA accumulation. Burkholderia sacchari demonstrated higher ability to accumulate PHA then Burkholderia cepacia. Then in the summary – most effective way for detoxification was ‚overliming‘. Major increase of PHB in biomass was obtained when Burkholderia sacchari was cultivated on media gained by application of overliming of real lignocellulose hydrolysate. However, total gains of PHB were more likely low and then sawdust can not be considered as a substrate for PHB production at industrial scale.

L’accumulation de biopolymère de réserve (PolyHydroxyAlcanoates ou PHA) par la souche Cupriavidus necator, à partir de substrats de type acides gras volatils (acide butyrique, acide propionique et acide acétique) a été étudiée. Elle est induite par une limitation phosphore. Les performances atteintes lors des cultures se situent parmi les meilleures de la littérature pour ce type de substrat : jusqu’à 66 g.L-1 de biomasse totale avec un pourcentage d’accumulation massique de 88% en PHB –PolyHydroxyButyrate- ou en PHB-co-HV -PolyHydroxyButyrate-co-HydroxyValerate- comportant jusqu’à 52% de motifs d’HV.Pour chaque source carbonée, une caractérisation cinétique et stœchiométrique de la souche a été réalisée en l’absence d’effets inhibiteurs dus aux substrats acides grâce à des cultures de type Fed-Batch avec des apports non limitants et non inhibiteurs en carbone. Il a été dégagé :- un taux de croissance maximal de la souche de 0,33 h-1 pour les trois acides étudiés- une relation entre vitesse spécifique de production de PHA et taux de croissance fixée par la disponibilité et les flux de production de NADPH2 avec un découplage inverse pour les taux de croissance supérieurs à 0,05 h-1 et un couplage partiel pour les taux de croissance inférieurs- un optimum de 0,35 Cmole.Cmole-1.h-1, associé à un taux de croissance de l’ordre de 0,05 h-1.- une amélioration de la production de PHB en termes de vitesses spécifiques mais également en termes de rendements si une faible croissance résiduelle est maintenueLa réponse de la souche à un excès de substrat acide a été caractérisée via l’étude de régimes transitoires induits par des pulses sur des cultures continues préalablement stabilisées en régime permanent. Il a été montré qu’en excès de phosphore, face à un brusque excès de substrat, la souche est incapable d’adapter rapidement son taux de croissance. L’excès est donc dirigé vers la production de PHA dont les voies sont plus rapidement mobilisables. En conditions limitantes de phosphore, le substrat excédentaire est utilisé pour la production de PHA. L’inhibition par les acides se traduit par une diminution des capacités de biosynthèse de la biomasse et des PHA entrainant une réduction de l’assimilation du carbone puis une diminution des rendements de conversion. D’autre part la sensibilité d’un système continu à un excès de substrat dépend du point de fonctionnement choisi : plus il est optimal en termes de vitesse, moins le système est robuste. L’acide propionique est très inhibiteur comparé aux autres acides étudiés (dès 3-4 mM contre 30-40 mM). Il n’agit pas simplement via une accumulation excessive dans le cytoplasme mais il exerce également une inhibition spécifique des voies métaboliques.Un antagonisme entre les substrats (acide acétique et butyrique) a été constaté et expliqué grâce à une analyse des flux métaboliques. L’acide acétique est assimilé préférentiellement pour produire la biomasse, l’énergie et les cofacteurs nécessaires à la production de PHA, alors que l’acide butyrique est utilisé pour la synthèse de PHB. La proportion maximale d’acide acétique admise dans l’alimentation en fonction des conditions fixées en régime permanent est calculée et peut être limitée à 40% du carbone.Enfin il a été déterminé que si une croissance résiduelle est assurée grâce à un apport en phosphore, le pourcentage maximal d’HV dans le polymère dépend du taux d’acide propionique dans l’alimentation et ne peux dépasser 33 ± 5% sur acide propionique pur. Par contre, si aucune croissance résiduelle n’est assurée, il est possible de convertir l’acide propionique en motifs d’HV uniquement / Reserve Biopolymer (PolyHydroxyAlkanoates or PHA) accumulation by the strain Cupriavidus necator, from Volatile Fatty Acids (VFA, like butyric acid, propionic acid and acetic acid) was investigated. This production is induced by a phosphorus limitation. For this type of substrates, performances reached during cultures are among the best listed in the literature: up to 66 g.L-1 of total biomass with 88% (w/w) of PHB –PolyHydroxyButyrate- or PHB-co-HV -PolyHydroxyButyrate-co-HydroxyValerate- with a HV content up to 52 Mole%.For each carbon source, kinetic and stoechiometric characterization has been carried out thanks to Fed-Batch cultures with non-limiting and non-inhibitory carbon feed. It has been established:- a maximal growth rate of 0,33 h-1 for the three acid investigated- a relationship between specific PHA production rate and growth rate which is set by the availability and production flux of NADPH2. For growth rate above 0,05 h-1, there is an inverse coupling. For growth rate under 0,05 h-1, there is a partial coupling.- an optimum of 0,35 Cmole.Cmole-1.h-1 is associated with a growth rate of 0,05 h-1.- if a low residual growth rate is maintained, an improvement of PHB production is recorded in terms of specific production rate and yieldsThe response of the strain to an excess of acid substrate was characterized through the investigation of transient state induced by pulsed addition of substrate during continuous cultures stabilized in steady state. It was shown that in excess of phosphorus, when there is a substrate excess, the strain is unable to quickly adapt its growth rate, so the excess is directed to PHA production whose ways seem to be more easily mobilized. Under phosphorus limitation, an excess of substrate is used for PHA production. Acid inhibition results in a decrease in biomass and PHA production capacity which leads to a decrease in carbon assimilation and conversion yields. The sensitivity of a continuous system to an excess of substrate depends on the chosen operating point: the more it is optimal in terms of specific production rate, the less the system is robust. Propionic acid is highly inhibitory compared to the other acids studied (from 3-4 mM versus 30-40 mM). It does not act only via an excessive accumulation in the cytoplasm but also exerts a specific inhibition of metabolic pathways.An antagonism between substrates (acetic and butyric acid) has been established and explained thanks to the Metabolic Flux Analysis. Acetic acid is preferentially used to produce biomass, energy and cofactors for PHA synthesis, whereas butyric acid is used to product PHB. According to the conditions set during steady state, maximal content of acetic acid admitted in the feed can be calculated. It can be limited to 40% of the carbon in the feed.Finally if a growth rate is maintained thanks to a phosphorus supply, the maximal HV content in polymer is function of propionic acid in the feed and cannot exceed 33 ± 5 Mole% on pure propionic acid. Conversely, if there is no residual growth, a total conversion of propionic acid into HV is allowed