Les phosphoinositides sont des molécules régulatrices présentes à l'interface membrane-cytosol, impliquées dans la transduction du signal, le trafic membranaire ainsi que l'organisation du cytosquelette. Ces lipides recrutent non seulement diverses protéines vers des compartiments spécifiques, mais régulent aussi leur activité enzymatique. Chez la levure Saccharomyces cerevisiae, ils interagissent directement avec le domaine RhoGAP de la protéine Rgd1, identifiée comme un activateur commun aux GTPases Rho3 et Rho4. Ces 2 protéines, respectivement impliquées dans la croissance polarisée et la cytocinèse, voient leur activité GTPasique exacerbée en présence de Rgd1pet des PIPs. L'objectif de cette thèse était comprendre à l'échelle moléculaire le processus unique d'activation de RhoGAP par les PIPs. Pour ce faire, nous avons réalisé l'étude structurale de RhoGAP par cristallographie couplée à la RMN en solution. Nos résultats montrent que le domaine possède les éléments essentiels à l'activation des protéines Rho. L'interaction avec les PIPs a été suivie par RMN en présence de PI(4)P et de PI(4,5)P2, respectivement localisés dans les vésicules de sécrétion et à la membrane plasmique. Nos résultats révèlent un site de liaison commun aux PIPs dans une région non conservée chez les domaines RhoGAP. L'affinité des complexes, de l'ordre de la centaine de micromolaires suggèrent qu'in vivo l'interaction soit transitoire et réversible avec les PIPs. La sélectivité de l'interaction se ferait donc de façon spatio-temporelle, au niveau des vésicules de sécrétion pour la croissance polarisée et de la membrane plasmique pour la cytocinèse. / Phosphoinositides act as regulatory and signalling molecules at the membrane-cytosol interface in signal transduction, membrane traffic and cytoskeleton organization. These lipids recruit several proteins to specific compartments, but also regulate their activity. In the yeast Saccharomycescerevisiae, they directly bind the Rgd1-RhoGAP domain, that stimulates the GTPase activity of bothRho3p and Rho4p. The GTPase activity of these two Rho proteins, respectively involved in the polarized growth and cytokinesis of the yeast, is enhanced with the presence of Rgd1p and PIPs. The main objective of this thesis is to understand the PIP-RhoGAP interaction at the molecular level. In order to do that, we coupled X-ray structure determination to solution NMR spectroscopy on the isolated RhoGAP domain. Our results show that the domain contains the conserved elements that would usually confer the catalytic GTPase activation. We us e liquid-state NMR spectroscopy to follow the interaction with PI(4)P and PI(4,5)P2, respectively found in secretion vesicles and the plasma membrane. Our study reveals a common binding site for both PIPs in a non-conserved region in the RhoGAP domain family. We measured sub-millimolar binding affinity for PIPs. Such moderate binding affinities are consistent with the biological requirement for reversible complex formation. The selectivity of the interaction could be made in a spatio temporal way, on the secretion vesicles during polarized growth and at the plasma membrane during cytokinesis.

Les travaux de recherches développés dans cette thèse concernent la réalisation de couchesminces, à partir de l’alliage à mémoire de forme (AMF) NiTi mécanoélaboré et de structurenanocristalline, en vue de leur intégration dans des microsystèmes. Le but est d’améliorer lespropriétés AMF de leurs homologues de structure microcristalline, dits conventionnels.Les techniques de caractérisation physico-chimiques (DRX, MET, MEB) nous ont permisd’une part, de suivre le mécanisme de formation de l’intermétallique B2-NiTi en fonction dutemps de broyage et d’autre part, de déterminer les paramètres microstructuraux à savoir, lataille des cristallites, le taux de microdéformations et la densité de dislocations des élémentspurs ainsi que ceux de la phase B2-NiTi. Ces paramètres révèlent le caractère nanocristallin etdésordonné des poudres broyées.Par ailleurs, nous avons fabriqué pour la première fois une cible B2-NiTi de structurenanocristalline, par l’intermédiaire d’une méthode alternative (mécanosynthèse et procédé deprojection à froid).Nous avons montré également qu’il est possible de déposer sous forme de couche mincel’intermétallique NiTi nanostructuré. Ce film mince d’épaisseur 447 nm a été déposé parpulvérisation cathodique à magnétron à partir de la cible élaborée par projection à froid (coldspray). / The research work developed in this thesis is related to preparing a thin film of NiTi shapememory alloy used to integrate into microsystems. The goal is to improve the properties oftheir counterparts of microcrystalline structure (conventional target).Physical and chemical techniques of characterization (XRD, TEM and SEM) have allowed onthe one hand, to follow the mechanism of intermetallic NiTi formation as a function ofmilling time and on the other hand, to determine the microstructural parameters : crystallitesize, the microstrain and dislocation density of the pure elements and the B2-NiTi phase.These parameters reveal the character of the disordered nanocrystalline of the milled powders.Furthermore, we fabricated a target of B2-NiTi nanocrystalline structure by an alternativemethod (mechanical alloying and cold spray).We also showed that it is possible to deposit the nanocrystalline NiTi intermetallic thin film.This film with a thickness of about 447 nm was deposited by magnetron sputtering techniquefrom the NiTi target.

Les foldamères d’oligoquinoline carboxamide forment des structures hélicoïdales en solution et dans le solide. Ces structures sont stabilisées par liaisons hydrogène, empilement aromatique et interactions électrostatiques. Dans une première partie de ce manuscrit, les fonctions amide connectant les unités quinolines ont été substituées par des fonctions vinylène, isostères de celles-ci. Ces composés quinolynènes-vinylènes, seuls, forment principalement des structures étendues en solution. Toutefois lorsque ces nouvelles unités sont en faible proportion au sein de l’oligomères contenant principalement de connections amides, des architectures hélicoïdales ont pu être obtenues. Dans une seconde partie, des ions Cu (II) ont été introduits au centre des hélices d’oligoquinoline carboxamide. Ces ions sont liés aux atomes d’azote des quinolines, et à ceux des fonctions amides après leur déprotonation. Une organisation linéaire de ces ions a été observée dans le solide. L’auto-assemblage d’hélices, en faisceaux, par empilement aromatique d’unités acridines portées par les chaines latérales a été entrepris dans une troisième partie de ce manuscrit. De faibles associations ont pu être mises en évidence en solution. Dans le solide ces interactions, bien que faibles, ont permis le contrôle de l’organisation des hélices dans le cristal. Dans une dernière partie de ce manuscrit, la coordination de métaux a été utilisée afin de permettre l’assemblage d’hélices d’oligoquinoline carboxamide. Des ligands acridine et pyridine ont été fixés sur la périphérie de l’hélice de façon à permettre la coordination par des métaux de transition tel que le palladium (II). Ces assemblages d’hélices induits par le palladium, ont été caractérisés par RMN en solution et par diffraction des rayons X dans le solide. / Oligo-quinolinecarboxamide foldamers form stable helical structures in solution and in the solid state. These helices are stabilized by hydrogen bonds, π-π stacking and electrostatic interactions. In a first part of this manuscript, vinyl functions have been introduced as isosteres of amides. The resulting quinolylene-vinylene oligomers form mainly extended structures in solution. Helical folded conformations can nevertheless be stabilized by attaching two segments of oligoamides at both ends of an oligoquinolylene-vinylene. In a second part, copper (II) ions have been loaded into the single helices of quinolinecarboxamide foldamers. The copper (II) ions coordinate the nitrogen atoms of the quinoline units and also deprotonated amide nitrogen atoms. A one dimensional alignment of the copper (II) ions was observed in the solid state. In a third part, acridine functionalized foldamers were prepared in order to test their self-assembly into bundles through interactions between aromatic functions at the exterior of helices. Associations of the acridine functionalized oligoamides are weak in organic solution. In contrast, in the solid state, interactions between helices are mainly governed by acridine units. In a fourth part, metal coordination has been used to promote helix-helix assembly of quinoline oligoamides foldamers. Acridine and pyridine rings have been attached on the side chains of these oligomers to allow coordination with metals, palladium (II) in this case. The helix-helix assembly of quinoline oligoamides by palladium coordination has been confirmed by NMR and x-ray diffraction.

Les aluminophosphates microporeux AlPO4-n possèdent un large potentiel d'applications en tant que catalyseurs et adsorbants, et présentent une affinité très particulière avec l'eau. L'hydratation de ces composés à structure zéolithique provoque généralement une modification réversible de leur structure, ce qui entraîne une altération de leurs propriétés. Ici, l'utilisation conjointe de résultats expérimentaux (RMN de l'aluminium et du phosphore, diffraction des rayons X, analyse thermique, spectroscopie infrarouge) et de calculs théoriques basés sur la Théorie de la Fonctionnelle de la Densité (DFT) amène une meilleure compréhension des interactions entre molécules d'eau et AlPO4-n.<br /> L'étude d'une structure modèle, l'AlPO4-34, apporte des informations sur le comportement de l'eau dans les pores. Elle permet également de présenter les mécanismes d'hydratation et de déshydratation et de proposer une phase partiellement hydratée, en accord avec des résultats expérimentaux. Une synergie est proposée entre la diffraction et une approche par dynamique moléculaire. Une description des domaines de stabilité des phases hydratées est aussi développée.<br /> A l'aide de cette approche théorique, de nouvelles structures sont ensuite étudiées. Tout d'abord, grâce à la diffraction des rayons X et des calculs DFT, la maille complète de l'AlPO4-36 calciné déshydraté est décrite. Ensuite, une étude expérimentale détaillée est complétée par une approche théorique statique et dynamique pour proposer des éléments de réponses sur la phase hydratée de l'AlPO4-18.<br /> Afin de généraliser l'étude à des mailles plus complexes et des temps de calcul plus courts, une comparaison des méthodes théoriques avec des bases d'ondes planes ou des bases d'orbitales localisées est effectuée. Ce comparatif fournit, après optimisation de la base, des résultats structuraux similaires entre les deux méthodes. Enfin, une approche d'ordre N est mise en oeuvre avec succès sur les structures microporeuses étudiées.

<p>The Li-ion battery has, from its commercialisation in the early 1990's, now become the most widely used power source for portable low-power electronics: laptops, cellular phones and MP3-players are a few examples. To further develop existing and find new electrode materials for these batteries, it is vital to understand the lithium insertion/extraction mechanisms taking place during battery operation. In this thesis, single-crystal X-ray diffraction has been used to investigate lithium insertion/extraction mechanisms in the cathode materials V₆O₁₃ and LiFePO₄. A novel single-crystal electrochemical cell for <i>in situ</i> single-crystal X-ray diffraction studies has also been developed.</p><p>The phases Li₃V₆O₁₃ and Li_3+xV₆O₁₃, 0<x<1, both contain a disordered lithium ion. A low-temperature study of Li_3.24V₆O₁₃ (at 95 K) shows that this disorder is static rather than dynamic; the lithium ion is equally distributed above and below an inversion centre in the centrosymmetric V₆O₁₃ host structure. Short-range-ordering between this disordered lithium ion and the lithium ion inserted into Li₃V₆O₁₃ gives rise to solid-solution behaviour not observed earlier in the Li_xV₆O₁₃ system. A model is proposed for the lithium insertion mechanism up to the end-member composition Li₆V₆O₁₃.</p><p>Lithium has also been electrochemically extracted from LiFePO₄ single crystals. On the basis of the shapes of the LiFePO₄ and FePO₄ reflections, it is concluded that FePO₄ is formed at the crystal surface and that the LiFePO₄/FePO₄ interface propagates into the crystal. This is in agreement with an earlier proposed model for lithium extraction from LiFePO₄ particles.</p><p>Initial experiments with the newly developed single-crystal electrochemical cell for <i>in situ</i> single-crystal X-ray diffraction demonstrate that it is possible to insert lithium into a single crystal of V₆O₁₃ and then collect single-crystal X-ray diffraction data. The method needs further development but promises to become a powerful tool for studying lithium insertion/extraction mechanisms.</p>

<p>Mixing excipients is a common way to produce pharmaceutical materials with suitable properties for drug formulation. An understanding of the basic mechanisms involved in the formation and transformation of the structures of solid state mixtures is crucial if one is to be able to produce materials with the desired properties in a reliable way. </p><p>In the first part of the thesis, the atomic force microscopy (AFM) technique was used to visualise the re-crystallisation of spray-dried amorphous particles comprised of lactose and PVP. The transformation was quantified on a single particle level and analysed with a common kinetic model, the JMAK-equation. The way in which the PVP was incorporated into the particles and the impact this had on their physical stability on exposure to increasing levels of humidity was investigated. The amount and, to a certain extent, the molecular weight of the PVP affected the moisture induced crystallisation of the particles. The inhibition was further discussed in terms of nucleation and growth. </p><p>In the second part of the thesis, the formation of phases in solid dispersions of monoolein (MO) in PEGs was studied by the use of SAXS and DSC. Upon solidification of a melt, the components phase separated, resulting in a PEG-rich phase and an MO phase. MO was intercalated into the amorphous domains of the lamellar structure of PEG. A second MO phase appeared in the mixtures where the average molecular weight of PEG was 1500 and 4000 g/mol. It was hypothesised that this second phase was formed in conjunction with the expulsion of MO as the PEG unfolded. </p><p>This thesis describes the application of two relatively unexplored solid state techniques on two different solid mixtures of pharmaceutical interest and, in so doing, contributes to the knowledge of phase formation and transformations in the solid state.</p>

Die Arbeit stellt neu entwickelte Röntgenbeugungsmethoden vor, mit deren Hilfe der Verzerrungszustand des Kristallgitters von Halbleiter-Wafern und -Bauteilen im Detail charakterisiert werden kann. Hierzu werden die aussergewöhnlichen Eigenschaften der an modernen Synchrotrons wie der ESRF (Grenoble) verfügbaren Röntgenstrahlung genutzt. <br>Im ersten Teil der Arbeit werden Röntgen-Diffraktometrie und -Topographie zu einer Untersuchungsmethode kombiniert, mit der die makroskopische Krümmung von Halbleiter-Wafern ebenso wie ihre mikroskopische Defektstruktur abgebildet werden kann. Der zweite Teil ist der Untersuchung von epitaktisch gewachsenen und geätzten Oberflächengittern mit Abmessungen im Submikrometer-Bereich gewidmet. Die unterschiedlichen Gitterkonstanten der beteiligten Halbleitermaterialien führen zu einem inhomogenen Verzerrungsfeld in der Probe, das sich im Röntgenbild durch eine charakteristische Verformung des Beugungsmusters in der Umgebung der Bragg-Reflexe äussert. Die Analyse der experimentell gemessenen Beugungsmuster geschieht mit Hilfe eines neu entwickelten Simulationsverfahrens, das Elastizitätstheorie und eine semi-kinematische Röntgenbeugungstheorie miteinander verbindet. Durch quantitativen Vergleich der Simulationsergebnisse mit den Messdaten kann auf den genauen Verlauf des Verzerrungsfeldes in den Proben zurückgeschlossen werden. Dieses Verfahren wird erfolgreich auf verschiedene Halbleiter-Probensysteme angewendet, und schliesslich auch auf die Untersuchung von akustischen Oberflächenwellen in Halbleiterkristallen übertragen. / This thesis presents newly developed X-ray methods which can be used to characterize in detail the state of distortion of the crystal lattice in semiconductor wafers, devices and nanostructures. The methods use the extraordinary properties of the X-rays available from modern synchrotron sources such as the ESRF (Grenoble). <br>In the first part of the thesis, X-ray diffractometry and X-ray topography are combined into a new method, called X-ray rocking curve imaging, which allows to image the macroscopic curvature of semiconductor wafers as well as the underlying microscopic defect structure. The second part of the thesis deals with the investigation of epitaxially grown and subsequently etched semiconductor gratings with lateral periods below the micrometer. The lattice mismatch between the different materials used in heteroepitaxy leads to a non-uniform strain field in the sample, which is reflected in a characteristic distortion of the X-ray diffraction pattern around each Bragg peak. The experimental data are evaluated with the help of a newly developed simulation procedure which combines elasticity theory with a semi-kinematical theory of X-ray diffraction. From a quantitative comparison of measured and simulated data the detailed shape of the strain field in the samples can be deduced. This procedure is used successfully for the structural characterization of different types of semiconductor gratings, and is finally applied also to the investigation of surface acoustic waves in crystals.

The scope of this thesis is the study of the interplay between structure and magnetism in amorphous materials. The investigations focus on the growth of amorphous layers and the study of the influence of structural disorder and reduced physical extension on the magnetic properties of thin films and multilayers. The examined magnetic materials are FeZr alloys, as well as other amorphous transition metal alloys such as CoZr and FeCoZr. Thin films and multilayers of the studied materials were deposited using magnetron sputtering in ultra-high vacuum conditions. Their amorphous structure and layering quality was investigated using X-ray scattering techniques and in several cases with transmission electron microscopy. The chemical composition of the alloys was determined with Rutherford Backscattering Spectrometry. The magnetic properties were investigated using the magneto-optic Kerr effect and SQUID magnetometry, as well as polarized neutron reflectometry and X-ray magnetic circular dicroism measurements. For FeZr alloys deposited as multilayers with Al2O3 as spacer layer, it was found that Fe-rich nanocrystallites, formed at the metal/oxide interfaces, exert large influence on the magnetic properties. The use of AlZr alloys as buffer layers promotes the growth of highly amorphous FeZr layers. FeZr/AlZr multilayers with good layering quality can also be obtained. The influence of the reduced layer thickness on the magnetic moment, Curie temperature and magnetic dimensionality of the magnetic layers is addressed for FeZr/AlZr multilayers. Thin FeZr layers in these structures are found to belong to the 2D XY dimensionality class. The change of the magnetic moment and Curie temperature with reduced FeZr layer thickness is quantified. In addition, the induced magnetic moment in the alloy element Zr was investigated in FeZr and CoZr alloy films. The possibility to imprint a preferred magnetization direction during thin film preparation was demonstrated for FeCoZr layers. Lastly, AlZr alloy films were studied with respect to their oxidation stability at room and elevated temperatures, aiming towards development of materials with passivating properties.

Magnetism of carbon-based materials is a challenging area for both fundamental research and possible applications. We present studies of low-dimensional carbon-based magnetic systems (fullerene-diluted molecular magnets, carbon nanotubes, graphite fluoride, and nanoporous carbon) by means of SQUID magnetometer, X-ray diffraction and vibrational spectroscopy, the latter techniques used as complementary instruments to find a correlation between the magnetic behaviour and the structure of the samples.In the first part of the thesis, characteristic features of the magnetization process in aligned films of carbon nanotubes with low concentration of iron are discussed. It is shown that the magnetism of such structures is influenced by quantum effects, and the anisotropy behaviour is opposite to what is observed in heavily doped nanotubes.In the second part, Mn12-based single molecular magnets with various carboxylic ligands and their 1:1 fullerene-diluted complexes are studied. We prove that magnetic properties of such systems strongly depend on the environment, and, in principle, it is possible to design a magnet with desirable properties. One of the studied compounds demonstrated a record blocking temperature for a single molecular magnet. Both fullerene-diluted complexes demonstrated “magnetization training” effect in alternating magnetic fields and the ability to preserve magnetic moment.The third and the fourth parts of the thesis are dedicated to the analysis of various contributions to the magnetic susceptibility of metal-free carbon-based systems – intercalated compounds of graphite fluorides and nanoporous oxygen-eroded graphite. The magnetic properties of these systems are strongly dependent on structure, and can be delicately tuned by altering the π-electron system of graphite, i. e. by degree of fluorination of intercalated compounds and by introduction of boron impurity to the host matrix of nanoporous graphite. / Magnetism av kolbaserade material är ett utmanande område för både grundforskning och möjliga tillämpningar. Vi presenterar studier med låg-dimensionella kolbaserade magnetiska system (fulleren-utspädda molekylära magneter, kolnanorör, grafit fluorid och nanoporösa kol) med hjälp av SQUID magnetometer, röntgendiffraktion och vibrerande spektroskopi, de senare tekniker som används som komplement instrument för att finna sambandet mellan den magnetiska uppträdande och strukturen hos proven. I den första delen av avhandlingen är egenheter från magnetisering processen i linje filmer av kolnanorör med låg koncentration av järn diskuteras. Det visas att magnetism av sådana strukturer påverkas av kvantmekaniska effekter och anisotropin beteende är motsatsen till vad som observerats i kraftigt dopade nanorör. I den tvåa delen är Mn12-baserade enda-molekyl magneter med olika karboxylsyror ligander och deras 1:1 fulleren-utspädda komplex studeras. Vi visar att magnetiska egenskaperna hos sådana system beror i hög grad på miljön, och i princip är det möjligt att utforma en magnet med önskvärda egenskaper. En av de studerade föreningarna visade en post blockeringstemperaturen för en enda molekylär magnet. Både fulleren-utspädda komplex visade "magnetisering utbildning" effekt i alternerande magnetfält och möjligheten att bevara magnetiskt moment. Den tredje och fjärde delarna av avhandlingen är avsedda för inneboende magnetism av analys av olika bidrag till magnetisk susceptibilitet av metall-fritt kol-baserade system -inskjutna föreningar grafit fluorider och nanoporösa O2-eroderade grafit. Magnetiska egenskaperna hos dessa system är starkt beroende av strukturen, och kan fint avstämmas genom att man ändrar π-elektronsystem av grafit, i. e. med graden av fluorering av inskjutna föreningar och genom införandet av bor föroreningar till värd matris av nanoporösa grafit.

The Li-ion battery has, from its commercialisation in the early 1990's, now become the most widely used power source for portable low-power electronics: laptops, cellular phones and MP3-players are a few examples. To further develop existing and find new electrode materials for these batteries, it is vital to understand the lithium insertion/extraction mechanisms taking place during battery operation. In this thesis, single-crystal X-ray diffraction has been used to investigate lithium insertion/extraction mechanisms in the cathode materials V6O13 and LiFePO4. A novel single-crystal electrochemical cell for in situ single-crystal X-ray diffraction studies has also been developed. The phases Li3V6O13 and Li3+xV6O13, 0&lt;x&lt;1, both contain a disordered lithium ion. A low-temperature study of Li3.24V6O13 (at 95 K) shows that this disorder is static rather than dynamic; the lithium ion is equally distributed above and below an inversion centre in the centrosymmetric V6O13 host structure. Short-range-ordering between this disordered lithium ion and the lithium ion inserted into Li3V6O13 gives rise to solid-solution behaviour not observed earlier in the LixV6O13 system. A model is proposed for the lithium insertion mechanism up to the end-member composition Li6V6O13. Lithium has also been electrochemically extracted from LiFePO4 single crystals. On the basis of the shapes of the LiFePO4 and FePO4 reflections, it is concluded that FePO4 is formed at the crystal surface and that the LiFePO4/FePO4 interface propagates into the crystal. This is in agreement with an earlier proposed model for lithium extraction from LiFePO4 particles. Initial experiments with the newly developed single-crystal electrochemical cell for in situ single-crystal X-ray diffraction demonstrate that it is possible to insert lithium into a single crystal of V6O13 and then collect single-crystal X-ray diffraction data. The method needs further development but promises to become a powerful tool for studying lithium insertion/extraction mechanisms.