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Development of a GC Method for the Quantification of Short Chain Carboxylic Acids in Aqueous SolutionÅkervall, Anton January 2020 (has links)
Petroleum powered vehicles emit volatile organic compounds (VOCs) through combustion that contributes to the pollution of the environment. A technique in the 1970s was developed to decrease these emissions, especially for nitrogen oxides (NOx) and sulphuric oxides (SOx) which is called exhaust gas recirculation (EGR). The technique works by recirculating a portion of the combusted gas back into the engine, this limits the NOx and SOx emissions because of lower temperatures and less available oxygen. The problems that follow these effects is the formation and condensation of acids that corrode the material of the EGR system, which are created by many different reactions. It is of importance to understand how the compounds in the EGR system behaves through analysis of authentic and simulated condensates, which is why a quantitative method for these compounds are of interest. The aim of the project was to develop a simple quantitative analysis method for formic acid, acetic acid, and lactic acid in aqueous solution, which was done at Gränges Sweden AB. The technique used for detection and quantification was gas chromatography (GC) coupled to a flame ionization detector (FID) and a water compatible polyethylene glycol (PEG) column. Fractional factorial design (FFD) was used for determination of adequate operating parameters of the GC method and the sample preparation. Sample preparation only required filtration and pH adjustment prior to direct aqueous injection (DAI) to the chromatographic instrument. Detection of the analytes was very difficult because of non-compatibility with the FID, and quantification of asymmetric peak shapes made this problem worse, omitting lactic acid from further analysis. Limit of detection (LOD) and limit of quantification (LOQ) was 490 and 1640 ppm for formic acid and 120 and 400 ppm for acetic acid, with an injection volume of 0.3 μL and split ratio 10:1. Limits were too high for every EGR sample leaving no peaks detected for the sample preparation used. Further development should be done with complementary techniques and sample reprocessing in order to quantify the compounds.
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Funktionelle Analyse und Charakterisierung des Gpr1-Proteins in der Hefe Yarrowia lipolyticaGentsch, Marcus 08 December 2003 (has links)
In der Hefe Yarrowia lipolytica führen Mutationen im GPR1-Gen zu Essigsäuresensitivität. Die Deletion dieses Genes hat demgegenüber keinen Effekt auf den Phänotyp. In dieser Arbeit wurde das Gpr1-Protein näher charakterisiert. Es zeigte sich, dass GPR1-Mutantenstämme wesentlich schneller Acetat akkumulierten als der Wildtyp. Außerdem konnte bestetigt werden, dass Gpr1p ein integrales Membranprotein ist. Mittels Ortspezifischer Analyse wurden verschiedene funktionelle Bereiche untersucht. Das Protein unterliegt zudem einer Phosphorylierung/Dephosphorylierung. Auf der Grundlage der dargelegten Ergebnisse wurde ein Funktionsmodell für Gpr1p erstellt.
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The Direct Detection and Kinetic Studies of Dimethylgermylene and Tetramethyldigermene In Solution By Nanosecond Laser Flash Photolysis / Dimethylgermylene and Tetramethyldigermene In SolutionLollmahomed, Farahnaz Begum 10 1900 (has links)
<p> Dimethylgermylene (GeMe2) has been generated by laser flash photolysis of 1,1dimethyl-3-phenylgermacyclopent-3-ene (23) and 1,1,3-trimethyl-4phenylgermacyclopent-3-ene (24) in hexanes at 25°C and its absorption maximum (λmax) has been unambiguously established to be 470 nm. GeMe2 decays with second-order kinetics under these conditions (2k/ε. = (10 ± 2) x 10^7 cm s^(-1)) to give Ge2Me4 (λmax = 370 nm). Kinetic studies of the reactions of GeMe2 and Ge2Me4 with typical germylene/digermene scavengers such as 1,3-dienes, olefins, alkynes, alkyl halides, group 14 metal hydrides, carboxylic acids, and amines have been carried out. </p>
<p> GeMe2 reacts reversibly with MeOH, t-BuOH and THF to form Lewis acid-base complexes which exhibit relatively strong absorption bands that are blue-shifted with respect to GeMe2 (λmax ~ 295-310 nm). The decay of the Me2Ge-MeOH complex is accelerated in the presence of a Brnnsted acid (acetic acid or methanesulfonic acid) or base (MeONa). The reactions of the Me2Ge-THF complex with sodium methoxide, methanesulfonic acid, 4,4-dimethyl-1-pentene, 2,3-dimethyl-1-butadiene, acetic acid and CC4 have also been studied in THF. </p>
<p> The photochemistry of two well-known precursors to GeMe2, namely dodecamethylcyclohexagermane (14) and dimethylphenyl(trimethylsilyl)germane (18) was reinvestigated. Laser flash photolysis of 14 in hexanes led to the formation of two transients, one with λmax= 490 nm (τ < & = 10 ns) and the second with λmax= 470 nm. The latter decays with second-order kinetics with concomitant formation of a new transient with λmax= 370 nm. The transient at 470 nm is assigned to GeMe2 and that at 370 nm to Ge2Me4, based on comparisons to the results obtained from laser flash photolysis of 23 and 24. Laser flash photolysis of 18-in hexane gives rise to two absorption bands centered at λmax = 300 nm and λmax = 430 nm, which are assigned to the dimethylphenylgerrnyl radical and the conjugated gerrnene derivative 38, respectively. GeMe2 cannot be detected in laser flash photolysis experiments with this compound. </p> / Thesis / Doctor of Philosophy (PhD)
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Systematic identification of thermal degradation products of HPMCP during hot melt extrusion processKarandikar, Hrushikesh M., Ambardekar, Rohan, Kelly, Adrian L., Gough, Tim, Paradkar, Anant R January 2015 (has links)
No / A systematic identification of the degradation products of hydroxypropyl methylcellulose phthalate (HPMCP) during hot melt extrusion (HME) has been performed. A reverse phase HPLC method was developed for the extrudates of both hydroxypropyl methylcellulose acetate succinate (HPMCAS) and HPMCP polymers to quantify their thermal hydrolytic products: acetic acid (AA), succinic acid (SA) for HPMCAS and phthalic acid (PA) for HPMCP, without hydrolysing the polymers in strong alkaline solutions. The polymers were extruded in the temperature range of 160-190 degrees C at different screw rotation speeds and hydrolytic impurities were analysed. Investigation of extruded HPMCP showed an additional thermal degradation product, who is structural elucidation revealed to be phthalic anhydride (PAH). Moreover, two environmental analytical impurities, dimethyl phthalate and methyl benzoate formed in situ were recorded on GC-MS and their origin was found to be associated with PAH derivatization. Using the experimental data gathered during this study, a degradation mechanism for HPMCP is proposed.
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The promoting role of Au in the Pd-catalysed synthesis of vinyl acetate monomerOwens, Thomas Graham January 2007 (has links)
No description available.
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Endoscopia com magnificação de imagem, cromoscopia e uso do ácido acético no esôfago de Barrett / Magnification endoscopy with chromoscopy and acetic acid in Barrett\'s oesophagusFrança, Livia Gomes Pereira 12 July 2004 (has links)
Esôfago de Barrett é definido como a substituição do epitélio escamoso normal por epitélio colunar com metaplasia intestinal especializada (MIE), tendo como causa a persistência do refluxo gastro-esofágico. Seu diagnóstico é baseado na identificação endoscópica e na confirmação histológica da presença de MIE. Esôfago de Barrett é a principal causa do desenvolvimento do adenocarcinoma esofágico. Aos pacientes com esôfago de Barrett é recomendada vigilância endoscópica com biópsias seriadas tentando-se diagnosticar, precocemente, lesões precursoras ou o adenocarcinoma em estágio precoce e factível de resposta à terapia. O aumento da incidência do adenocarcinoma tem contribuído para o estudo de novas técnicas endoscópicas visando melhorar a detecção destas lesões. Este estudo foi realizado objetivando-se avaliar a eficácia da cromoscopia com azul de metileno, associada a magnificação de imagem com ácido acético, na detecção de MIE, displasia e adenocarcinoma. Prospectivamente, 35 pacientes com diagnóstico de esôfago de Barrett em acompanhamento ambulatorial, com extensão superior a 2,0 cm, realizaram dois exames de endoscopia digestiva alta, sendo um convencional com biópsias seriadas e um segundo com aplicação de azul de metileno, seguida do ácido acético, magnificação de imagem e biópsias. Realizaram-se biópsias adicionais de qualquer alteração do relevo mucoso. A freqüência diagnóstica da metaplasia intestinal especializada foi de 71,4% e 77,1% para biópsias orientadas pelo método convencional e pelo método da cromoscopia/magnificação de imagem, respectivamente (p=0,41). Freqüência de displasia ou adenocarcinoma foi de 9% para as biópsias orientadas pelo método convencional e 6% para biópsias orientadas pela cromoscopia/magnifcação de imagem. Tanto os pacientes com displasia de alto grau quanto aqueles com adenocarcinoma apresentaram alterações em sua superfície mucosa visíveis em ambos os métodos endoscópicos. A sensibilidade e a especificidade da cromoscopia, quando avaliamos as áreas coradas em detectar MIE foi de 88% e 50%, respectivamente. A sensibilidade e a especificidade das áreas não coradas em detectar displasia e/ou adenocarcinoma foi de 75% e 100%, respectivamente. A sensibilidade e a especificidade da magnificação de imagem, quando avaliamos as áreas com padrão viliforme em detectar MIE foi 88% e 50%, respectivamente. Tanto a sensibilidade quanto a especificidade das áreas com padrão amorfo em detectar displasia e/ou adenocarcinoma foi de 100%. A sensibilidade e a especificidade da cromoscopia/magnificação de imagem, para padrão corado e viliforme, em detectar MIE foi de 83% e 50%, respectivamente. Já a sensibilidade e a especificidade das áreas não coradas e com padrão amorfo em detectar displasia e/ou adenocarcinoma teve seu cálculo prejudicado pela pequena amostra estudada. Na comparação dos dois métodos empregados, verificaram-se resultados similares na detecção de metaplasia intestinal, displasia e câncer. A realização de cromoscopia/magnificação de imagem proporcionou: alta sensibilidade e baixa especificidade na detecção da metaplasia intestinal especializada e baixa sensibilidade e alta especificidade na detecção de displasia ou adenocarcinoma. Alterações da superfície mucosa corresponderam as áreas neoplásicas. / Barrett\'s esophagus is defined as the replacement of the normal squamous epithelium by columnar lined esophagus. The diagnosis requires endoscopically visible columnar lined esophagus and histologic identification of characteristic specialized intestinal-type metaplasia (SIM). Gastroesophageal reflux has been proposed as a risk factor for Barrett`s esophagus and this disease has been shown to be the main cause of esophageal adenocarcinoma. After the diagnosis of Barrett`s esophagus, endoscopy surveillance is recommended with multiple biopsies of the columnar lined esophagus at quadrants of 2 cm intervals to determine epithelial dysplasia or adenocarcinoma in early and curable stage. Due to the increase in the incidence of esophageal adenocarcinoma new techniques of endoscopic surveillance have been proposed. The aim of this study was to evaluate the efficacy of magnification chromoendoscopy with methylene blue and acetic acid for the detection of intestinal metaplasia, dysplasia and cancer. Prospectively, 35 patients with Barrett\'s esophagus extending for more than 2,0 cm, underwent two upper digestive endoscopy procedures, including one with conventional biopsies and other with chromoendoscopy using methylene blue and acetic acid instillation, magnification and biopsies. Biopsies were also taken from any suspicious mucosal area. The incidence of MIE were 71,4% e 77,1% from conventional biopsies and chromoendoscopy/magnification, respectively. Dysplasia and adenocarcinoma were diagnosed in 9% and 6% throught conventional biopsies and chromoendoscopy/magnification, respectively. Patients with high grade dysplasia or adenocarcinoma revealed mucosal alterations. The sensitivity and specificity rates for chromoendoscopy for stained areas for MIE were 88% and 50%, respectively. The sensitivity and specificity rates for non stained areas for dysplasia and cancer were 75% and 100%, respectively. The sensitivity and specificity rates for magnification for villous areas for MIE were 88% and 50%, respectively. The sensitivity and specificity rates for distorted areas for dysplasia and cancer were 100%. The sensitivity and specificity rates for chromoendoscopy/magnification (for stained and villous areas) for MIE were 83% and 50%, respectively. The sensitivity and specificity rates for non stained and distorted areas couldn?t be evaluated due to the small number of patients. In conclusion, results of the two methods were similar in detecting intestinal metaplasia, dysplasia and cancer. The chromoendoscopy/magnification method procedure provides high sensitivity and low specificity rates in detecting MIE and low sensitivity and high specificity rates in detecting dysplasia and adenocarcinoma. Alterations in the mucosa corresponded to cancer and dysplasia.
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Biohemijska i fiziološka karakterizacija klonovatopole (Populus spp.) u procesu fitoekstrakcije bakra, nikla i kadmijuma / Biohemical and physiological characterization of three poplar clones (Populus spp.) during the copper, nickel and cadmium phytoextraction processKebert Marko 12 December 2014 (has links)
<p>Predmet ovog istaživanja bio je ispitivanje uticaja jona tri teška metala (Ni<sup>2+</sup>, Cu<sup>2+ </sup>i Cd<sup>2+</sup>) u dve toksične koncentracije u zemljištu na fiziološke i biohemijske karakteristike <br />odabranih klonova topola, M1, B229 i Pe 19/66. Ispitan je i potencijal odabranih klonova topola da vrše fitoekstrakciju-akumulaciju teških metala iz zemljišta u svoje nadzemne delove što dovodi do dugoročnog uklanjanja ovih perzistentnih polutanata iz životne sredine. Takođe, ispitan je uticaj teških metala na antioksidantni potencijal, sposobnost <br />neutalizacije slobodnih radikala, aktivnosti antioksidantih enzima kao i na sadržaj slobodnih i konjugovanih poliamina (Put, Spm, Spd), određenih HPLC analizom, i sadržaj biljnih hormona poput indol-3-sirćetne kiseline i abscisinske kiseline, određenih GC/MS analizom, u listovima i korenovima klonova topola.</p><p> </p> / <p>The aim of this study was to estimate and compare phytoextraction capacities of three poplar clones (M1, B229 and Pe 19/66) in soil. Furthermore, the goal was to assess different biological responses among the poplar clones during exposure to different concentration of three heavy metal ions (Ni<sup>2+</sup>, Cu<sup>2+</sup> i Cd<sup>2+</sup>). In order to track changes in poplars’mineral, physiological, biochemical and antioxidant status during the abiotic stress, quantification of physiological properties, free and conjugated polyamines, total phenolics as well as quantification of phytohormones (indol-3-acetic and abscisic acid) was done. Furthermore, assessment of antioxidant potential by tracking radical scavenger capacities (RSC) against DPPH, ABTS, OH and NO radicals and by measuring enzymes activities (SOD, GSH-Px, GPx, GR) in vitro was performed in root and leaves of poplar clones.</p>
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Endoscopia com magnificação de imagem, cromoscopia e uso do ácido acético no esôfago de Barrett / Magnification endoscopy with chromoscopy and acetic acid in Barrett\'s oesophagusLivia Gomes Pereira França 12 July 2004 (has links)
Esôfago de Barrett é definido como a substituição do epitélio escamoso normal por epitélio colunar com metaplasia intestinal especializada (MIE), tendo como causa a persistência do refluxo gastro-esofágico. Seu diagnóstico é baseado na identificação endoscópica e na confirmação histológica da presença de MIE. Esôfago de Barrett é a principal causa do desenvolvimento do adenocarcinoma esofágico. Aos pacientes com esôfago de Barrett é recomendada vigilância endoscópica com biópsias seriadas tentando-se diagnosticar, precocemente, lesões precursoras ou o adenocarcinoma em estágio precoce e factível de resposta à terapia. O aumento da incidência do adenocarcinoma tem contribuído para o estudo de novas técnicas endoscópicas visando melhorar a detecção destas lesões. Este estudo foi realizado objetivando-se avaliar a eficácia da cromoscopia com azul de metileno, associada a magnificação de imagem com ácido acético, na detecção de MIE, displasia e adenocarcinoma. Prospectivamente, 35 pacientes com diagnóstico de esôfago de Barrett em acompanhamento ambulatorial, com extensão superior a 2,0 cm, realizaram dois exames de endoscopia digestiva alta, sendo um convencional com biópsias seriadas e um segundo com aplicação de azul de metileno, seguida do ácido acético, magnificação de imagem e biópsias. Realizaram-se biópsias adicionais de qualquer alteração do relevo mucoso. A freqüência diagnóstica da metaplasia intestinal especializada foi de 71,4% e 77,1% para biópsias orientadas pelo método convencional e pelo método da cromoscopia/magnificação de imagem, respectivamente (p=0,41). Freqüência de displasia ou adenocarcinoma foi de 9% para as biópsias orientadas pelo método convencional e 6% para biópsias orientadas pela cromoscopia/magnifcação de imagem. Tanto os pacientes com displasia de alto grau quanto aqueles com adenocarcinoma apresentaram alterações em sua superfície mucosa visíveis em ambos os métodos endoscópicos. A sensibilidade e a especificidade da cromoscopia, quando avaliamos as áreas coradas em detectar MIE foi de 88% e 50%, respectivamente. A sensibilidade e a especificidade das áreas não coradas em detectar displasia e/ou adenocarcinoma foi de 75% e 100%, respectivamente. A sensibilidade e a especificidade da magnificação de imagem, quando avaliamos as áreas com padrão viliforme em detectar MIE foi 88% e 50%, respectivamente. Tanto a sensibilidade quanto a especificidade das áreas com padrão amorfo em detectar displasia e/ou adenocarcinoma foi de 100%. A sensibilidade e a especificidade da cromoscopia/magnificação de imagem, para padrão corado e viliforme, em detectar MIE foi de 83% e 50%, respectivamente. Já a sensibilidade e a especificidade das áreas não coradas e com padrão amorfo em detectar displasia e/ou adenocarcinoma teve seu cálculo prejudicado pela pequena amostra estudada. Na comparação dos dois métodos empregados, verificaram-se resultados similares na detecção de metaplasia intestinal, displasia e câncer. A realização de cromoscopia/magnificação de imagem proporcionou: alta sensibilidade e baixa especificidade na detecção da metaplasia intestinal especializada e baixa sensibilidade e alta especificidade na detecção de displasia ou adenocarcinoma. Alterações da superfície mucosa corresponderam as áreas neoplásicas. / Barrett\'s esophagus is defined as the replacement of the normal squamous epithelium by columnar lined esophagus. The diagnosis requires endoscopically visible columnar lined esophagus and histologic identification of characteristic specialized intestinal-type metaplasia (SIM). Gastroesophageal reflux has been proposed as a risk factor for Barrett`s esophagus and this disease has been shown to be the main cause of esophageal adenocarcinoma. After the diagnosis of Barrett`s esophagus, endoscopy surveillance is recommended with multiple biopsies of the columnar lined esophagus at quadrants of 2 cm intervals to determine epithelial dysplasia or adenocarcinoma in early and curable stage. Due to the increase in the incidence of esophageal adenocarcinoma new techniques of endoscopic surveillance have been proposed. The aim of this study was to evaluate the efficacy of magnification chromoendoscopy with methylene blue and acetic acid for the detection of intestinal metaplasia, dysplasia and cancer. Prospectively, 35 patients with Barrett\'s esophagus extending for more than 2,0 cm, underwent two upper digestive endoscopy procedures, including one with conventional biopsies and other with chromoendoscopy using methylene blue and acetic acid instillation, magnification and biopsies. Biopsies were also taken from any suspicious mucosal area. The incidence of MIE were 71,4% e 77,1% from conventional biopsies and chromoendoscopy/magnification, respectively. Dysplasia and adenocarcinoma were diagnosed in 9% and 6% throught conventional biopsies and chromoendoscopy/magnification, respectively. Patients with high grade dysplasia or adenocarcinoma revealed mucosal alterations. The sensitivity and specificity rates for chromoendoscopy for stained areas for MIE were 88% and 50%, respectively. The sensitivity and specificity rates for non stained areas for dysplasia and cancer were 75% and 100%, respectively. The sensitivity and specificity rates for magnification for villous areas for MIE were 88% and 50%, respectively. The sensitivity and specificity rates for distorted areas for dysplasia and cancer were 100%. The sensitivity and specificity rates for chromoendoscopy/magnification (for stained and villous areas) for MIE were 83% and 50%, respectively. The sensitivity and specificity rates for non stained and distorted areas couldn?t be evaluated due to the small number of patients. In conclusion, results of the two methods were similar in detecting intestinal metaplasia, dysplasia and cancer. The chromoendoscopy/magnification method procedure provides high sensitivity and low specificity rates in detecting MIE and low sensitivity and high specificity rates in detecting dysplasia and adenocarcinoma. Alterations in the mucosa corresponded to cancer and dysplasia.
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Chemical and Genetic Diversity in Sesame (Sesamum indicum L.) / Chemische und Genetische Divesitat in Sesame (Sesamum indicum L.)Syed, Rehana Naz 28 October 2011 (has links)
Biologische Diversität existiert sowohl
zwischen mehreren Arten als auch innerhalb einer Art, innerhalb von
Populationen und Individuen einer Population. Die intraspezifische
Diversität wurde bislang ausgiebig auf der Ebene des Genoms
untersucht. Sie ist im Kontext metabolischer Zusammenhänge in
Pflanzen bisher kaum untersucht und es existieren nur wenige
Veröffentlichungen zu diesem Thema. Uns sind bisher keine
Publikationen zu Phytohormonen in Sesam bekannt. Neben dem
wissenschaftlichen Interesse an der metabolischen Diversität in
Sesam, spielen Stresshormone eine wichtige Rolle in der
pflanzlichen Abwehr. Der Phytohormonspiegel im Samen ist unter
agronomischen Gesichtspunkten relevant, da es vorkommen kann, dass
Sesamsamen spontan auskeimen, während sie sich noch an der grünen
Pflanze befinden. Diese Eigenschaft ist unerwünscht, da der
wertvolle Samen auf diese Weise verloren geht. Im Rahmen dieser
Arbeit wurde die Variation im Phytohormonniveau in 16 Akzessionen
mit unterschiedlicher geographischer Herkunft untersucht. In
Blättern und Wurzeln konnten ABA, JA, SA und SAG nachgewiesen
werden, während GA4 lediglich in Blättern vorkam. Eine der
Akzessionen aus Japan („Japan 2“) produzierte JA, SA und SAG in
hohem Ausmaß. Hier konnten außerdem hohe Gehalte an Chitinasen
festgestellt werden. Chitinasen sind für den Abbau von Chitin, dem
Hauptbestandteil der pilzlichen Zellwand, verantwortlich. Eine
Charakterisierung der Akzessionen mittels AFLP-Analyse zeigte, dass
sich „Japan 2“ genetisch nicht mehr von anderen Akzessionen
unterschied, als das Mittel der Unterschiede innerhalb aller
gesammelten Proben. Bereits in früheren Untersuchungen unserer
Arbeitsgruppe im Rahmen einer ungerichteten Metabolitenanalyse,
konnte eine hohe Variabilität bei Sesamakzessionen gezeigt werden
(Laurentin et al. 2006). Darüber hinaus, stimmen die Unterschiede
im metabolischen Profil der Akzessionen nicht mit dem Grad ihrer
genetischen Verwandtschaft überein. Es ist bekannt, dass
tageszeitliche Unterschiede viele biologische Prozesse
kontrollieren. Wir haben die tageszeitlichen Effekte auf den
Phytohormonstatus untersucht und dabei die Unterschiede in
Pflanzenorganen berücksichtigt. Tageszeitliche Konzentrationen von
ABA, JA, IAA, SA und SAG wurden zu 8 unterschiedlichen
Tageszeitpunkten in 3 unabhängigen Replikaten mittels HPLC
untersucht. Wir konnten keine statistisch signifikanten
Unterschiede erkennen. Die Untersuchungen zeigten jedoch eine
Variation in den Phytohormonkonzentrationen in unterschiedlichen
pflanzlichen Organen. Sekundäre pflanzliche Metabolite spielen als
Resistenzfaktoren gegen Mikroorganismen eine wichtige Rolle.
Sesamakzessionen, die diese Substanzen im hohen Ausmaß produzieren,
stellen eine wichtige züchterische Ressource da. Um die Variation
innerhalb der Akzessionen zu untersuchen, die ein hohes Niveau an
sekundären Inhaltsstoffen aufweisen, haben wir die Effekte von 32
Pflanzenextrakten aus Sesamakzessionen gegen phytopathogene Pilze
untersucht. Darunter befand sich ein Wurzelpathogen mit
Spezialisierung auf Sesam (Macrophomina phaseolina), ein
Blattpathogen mit breitem Wirtspflanzenkreis (Alternaria alternata)
und Gefäßpathogen (Fusarium oxysporum). Die Diversität der Effekte,
die für die unterschiedlichen Akzessionen beobachtet werden
konnten, führt zu der Annahme, dass die Resistenzeigenschaften der
Pflanzen durch gezielte züchterische Beeinflussung der
metabolischen Aktivität verbessert werden können. In
weiterführenden Untersuchungen zur Aufreinigung der Substanzen mit
inhibitorischer Wirkung wurden Pflanzenextrakte in 80% Ethanol mit
verschiedenen organischen Lösungsmitteln fraktioniert. Die meisten
inhibitorischen Effekte konnten der Diethylether-Fraktion
zugeschrieben werden. Im ersten Schritt wurden 4L des Extraktes
hergestellt. Zwei aufgereinigte Lignane aus Sesam wurden gegen M.
phaseolina, A. alternata und F. oxysporum getestet. Sesamin zeigte
keinen Effekt bis zu einer Konzentration von 5mg/ml, während
Sesamol (und 2,4-Dinitrophenol als Kontrolle) einen starken
inhibitorischen Effekt aufwies. Für diese Substanzen wurden IC50
Werte ermittelt. Man kann festhalten, dass Sesamol dazu dienen
kann, das Wachstum invasiver Pathogene einzuschränken. Durch die
Kreuzung von zwei Elternlinien, die in der AFLP-Analyse einen
signifikanten Polymorphismus aufwiesen, wurden Inzuchtlinien
erzeugt. Die Nachkommen dieser Kreuzung wurden in 5 Generationen
selbstbefruchtet. Das so entstandene Set aus RILs wurde mittels
AFLP charakterisiert. Alle untersuchten RILs waren Hybride. Dies
zeigt, dass während der ersten Kreuzung der Elternlinien keine
Selbstung erfolgte. Wie erwartet, spalteten polymorphe AFLP-Marker
der Elternlinien in den RILs zufällig auf. Monomorphe Marker
fehlten in einigen RILs. Des Weiteren traten neue Marker auf, die
zuvor nicht in den Elternlinien festgestellt werden konnten. Das
Auftreten neuer Marker kann durch Rekombination zwischen
Restriktionsfragmenten erklärt werden, welche die AFLP-Marker
begrenzen. Die RILs werden nun von unseren Kooperationspartnern zum
Aufbau einer genetischen Karte verwendet (Prof. Sami Doganlar und
seine Arbeitsgruppe, Universität Antalya, Türkei).
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MASS SPECTROMETRIC DETECTION OF INDOPHENOLS FROM THE GIBBS REACTION FOR PHENOLS ANALYSISSabyasachy Mistry (7360475) 28 April 2020 (has links)
<p><a></a><a></a><a></a><a></a><a></a><a></a><a></a><a></a><a></a><a></a><a>ABSTRACT</a></p>
<p>Phenols
are ubiquitous in our surroundings including biological molecules such as
L-Dopa metabolites, food components, such as whiskey and liquid smoke, etc. This
dissertation describes a new method for detecting phenols, by reaction with
Gibbs reagent to form indophenols, followed by mass spectrometric detection.
Unlike the standard Gibbs reaction which uses a colorimetric approach, the use
of mass spectrometry allows for simultaneous detection of differently
substituted phenols. The procedure is demonstrated to work for a large variety
of phenols without <i>para</i>‐substitution. With <i>para</i>‐substituted
phenols, Gibbs products are still often observed, but the specific product
depends on the substituent. For <i>para</i> groups with high
electronegativity, such as methoxy or halogens, the reaction proceeds by
displacement of the substituent. For groups with lower electronegativity, such
as amino or alkyl groups, Gibbs products are observed that retain the
substituent, indicating that the reaction occurs at the <i>ortho</i> or <i>meta</i> position.
In mixtures of phenols, the relative intensities of the Gibbs products are
proportional to the relative concentrations, and concentrations as low as
1 μmol/L can be detected. The method is applied to the qualitative
analysis of commercial liquid smoke, and it is found that hickory and mesquite
flavors have significantly different phenolic composition.</p>
<p>In the
course of this study, we used this technique to quantify major phenol
derivatives in commercial products such as liquid smoke (catechol, guaiacol and
syringol) and whiskey (<i>o</i>-cresol,
guaiacol and syringol) as the phenol derivatives are a significant part of the
aroma of foodstuffs and alcoholic beverages. For instance, phenolic compounds
are partly responsible for the taste, aroma and the smokiness in Liquid Smokes
and Scotch whiskies. </p>
<p>In the
analysis of Liquid Smokes, we have carried out an analysis of phenols in
commercial liquid smoke by using the reaction with Gibbs reagent followed by
analysis using electrospray ionization mass spectrometry (ESI-MS). This
analysis technique allows us to avoid any separation and/or solvent extraction
steps before MS analysis. With this analysis, we are able to determine and
compare the phenolic compositions of hickory, mesquite, pecan and apple wood
flavors of liquid smoke. </p>
<p>In the analysis of phenols in whiskey, we describe the
detection of the Gibbs products from the phenols in four different commercial
Scotch whiskies by using simple ESI-MS. In addition, by addition of an internal
standard, 5,6,7,8-tetrahydro-1-napthol (THN), concentrations of the major
phenols in the whiskies are readily obtained. With this analysis we are able to
determine and compare the composition of phenols in them and their contribution
in the taste, smokey, and aroma to the whiskies.</p>
<p>Another
important class of phenols are found in biological samples, such as L-Dopa and
its metabolites, which are neurotransmitters and play important roles in living
systems. In this work, we describe the detection of Gibbs products
formed from these neurotransmitters after reaction with Gibbs reagent and
analysis by using simple ESI‐MS. This technique would be an alternative method
for the detection and simultaneous quantification of these neurotransmitters. </p>
<p>Finally,
in the course of this work, we found that the positive Gibbs tests are obtained
for a wide range of <i>para</i>-substituted
phenols, and that, in most cases, substitution occurs by displacement of the <i>para</i>-substituent. In addition, there is
generally an additional unique second-phenol-addition product, which
conveniently can be used from an analytical perspective to distinguish <i>para</i>-substituted phenols from the
unsubstituted versions. In addition to
using the methodology for phenol analysis, we are examining the mechanism of
indophenol formation, particularly with the <i>para</i>-substituted
phenols. </p>
<p>The
importance of peptides to the scientific world is enormous and, therefore,
their structures, properties, and reactivity are exceptionally
well-characterized by mass spectrometry and electrospray ionization. In the
dipeptide work, we have used mass spectrometry to examine the dissociation of
dipeptides of phenylalanine (Phe), containing sulfonated tag as a charge
carrier (Phe*), proline (Pro) to investigate their gas phase dissociation. The
presence of sulfonated tag (SO<sub>3</sub><sup>-</sup>) on the Phe amino acid
serves as the charge carrier such that the dipeptide backbone has a canonical
structure and is not protonated. Phe-Pro dipeptide and their derivatives were
synthesized and analyzed by LCQ-Deca mass spectroscopy to get the fragmentation
mechanism. To confirm that fragmentation path, we also synthesized
dikitopeparazines and oxazolines from all combinations of the dipeptides. All
these analyses were confirmed by isotopic labeling experiments and determination
and optimization of structures were carried out using theoretical calculation.
We have found that the fragmentation of Phe*Pro and ProPhe* dipeptides form
sequence specific b<sub>2</sub> ions. In addition, not only is the ‘mobile
proton’ involved in the dissociation process, but also is the ‘backbone
hydrogen’ is involved in forming b<sub>2</sub> ions. </p>
<p> </p>
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