Made available in DSpace on 2017-07-10T18:13:23Z (GMT). No. of bitstreams: 1 Vanessa Salete Daga.pdf: 597296 bytes, checksum: ad426af73e607b92ceea3cce0dbf170b (MD5) Previous issue date: 2010-08-12 / The objective of this study was to evaluate the composition and structure of the assemblages of native and nonnative fish along the temporal and spatial gradient on the Iguaçu River, and their relations with environmental variables in five reservoirs. Samples were collected from January 2004 to December 2008, with periodicity quarterly in reservoirs Foz do Areia, Segredo and Salto Caxias, while in reservoirs Salto Santiago and Salto Osório samples were bimonthly. Catches were made with the aid of gillnets (mesh size of 2.4 to 16 cm) and trammel nets (witches, 6, 7 and 8 cm between non-adjacent), operated on the surface, margin and bottom, exposed for 24 hours with checked at 8:00, 16:00 and 22:00 hours. Fish caught were identified, measured and weighed. The community structure was evaluated by its attributes of species (richness), abundance (biomass and number of individuals) and diversity index of Shannon. The environmental variables were plotted on a matrix (physics and chemistry) and is summarized by principal component analysis (PCA). To summarize the data on the composition and structure of the assemblages of native and nonnative fish, analysis of non-metric multidimensional scaling (NMDS) was used. The degree of association between multivariate matrices (environmental variables and the composition and structure of the assemblages of native fish and non-native) was assessed by means of a Procrustes routine. During the study period were collected from 152,007 specimens, 148,084 individuals of native species and 3,923 specimens of non-native species, which were divided into six orders, 16 families, 32 genera and 50 species. The most abundant native species were Astyanax sp. B (40.1%), Astyanax sp. C (19.1%) and Pimelodus britskii (9.1%). The non-native species were more abundant Odontesthes bonariensis (85.1%), Prochilodus lineatus (7.5%) and Tilapia rendalli (4.9%). The distribution of abundance in numbers and weight was higher in Salto Santiago, both native and non native. Spatial and temporal differences were apparent for wealth, for both native and non native, but the Shannon diversity index showed significant differences only for native species. The composition and structure of the assembly of native and nonnative fish showed significant differences along the longitudinal gradient of the Iguaçu River. The physical and chemical variables (water temperature, water transparency, pH and electrical conductivity) were significant for the separation of the reservoirs along the longitudinal gradient. Procrustes analysis showed that an association exists between the physical and chemical variables, and the spatial arrangement of the composition and structure of the assemblages of native fish. / O objetivo deste trabalho foi avaliar a composição e estrutura da assembleia de peixes nativos e não nativos, ao longo do gradiente espacial e temporal no rio Iguaçu e, suas relações com as variáveis ambientais em cinco reservatórios. As amostragens foram realizadas de janeiro de 2004 à dezembro de 2008, com periodicidade trimestral nos reservatórios de Foz do Areia, Segredo e Salto Caxias, enquanto que nos reservatórios de Salto Santiago e Salto Osório as amostragens foram bimestrais. As capturas foram realizadas com o auxílio de redes de espera simples (malhas de 2,4 a 16 cm) e tresmalhos (feiticeiras de 6, 7 e 8 cm entre nós não adjacentes), operadas na superfície, margem e fundo, expostas por 24 horas com revistas às 8:00, 16:00 e 22:00 horas. Os peixes capturados foram identificados, medidos e pesados. A estrutura da comunidade foi avaliada pelos seus atributos número de espécies (riqueza), abundância (biomassa e número de indivíduos) e índice de diversidade de Shannon. As variáveis ambientais foram plotadas em uma matriz (física e química), sendo essa sumarizada pela análise de componentes principais (PCA). Para sumarizar os dados de composição e estrutura da assembleia de peixes nativos e não nativos, a análise de escalonamento multidimensional não-métrico (NMDS) foi utilizada. O grau de associação entre as matrizes multivariadas (variáveis ambientais e composição e estrutura da assembleia de peixes nativos e não nativos) foi avaliado por meio de uma rotina Procrustes. Durante o período amostral foram coletados 152.007 exemplares, sendo 148.084 indivíduos de espécies nativas e 3.923 exemplares de espécies não nativas, que foram distribuídos em seis ordens, 16 famílias, 32 gêneros e 50 espécies. As espécies nativas mais abundantes foram Astyanax sp. B (40,1%), Astyanax sp. C (19,1%) e Pimelodus britskii (9,1%). As espécies não nativas mais abundantes foram Odontesthes bonariensis (85,1%), Prochilodus lineatus (7,5%) e Tilapia rendalli (4,9%). A distribuição de abundância, em número de indivíduos e peso foi maior em Salto Santiago, tanto para espécies nativas como não nativas. Diferenças espaciais e temporais significativas foram verificadas para a riqueza, tanto para espécies nativas como não nativas, entretanto o índice de diversidade de Shannon, mostrou diferenças significativas somente para as espécies nativas. A composição e estrutura da assembleia de peixes nativos e não nativos, apresentaram diferenças significativas ao longo do gradiente longitudinal do rio Iguaçu. As variáveis físicas e químicas (temperatura da água, transparência da água, pH e condutividade elétrica), foram significativas para a separação dos reservatórios ao longo do gradiente longitudinal. A análise de Procrustes mostrou que existe associação entre as variáveis físicas e químicas, e o arranjo espacial da composição e estrutura da assembleia de peixes nativos.

L'objectif général de la thèse est d'examiner la variation et l'évolution des traits fonctionnels<p>susceptibles de sous-tendre des variations de capacité d'invasion, au sein du complexe de plantes envahissantes F. japonica, F. xbohemica et F. sachalinensis en Belgique. Ces trois taxons d'origine asiatique présentent un intérêt majeur en écologie des invasions car ils possèdent une aptitude à l'invasion contrastée bien qu'ils fassent partie du même complexe hybride, aient la même forme de vie, et la même distribution géographique. <p>En particulier, la thèse examine si Fallopia sachalinensis présente une combinaison particulière de traits fonctionnels liés à la capture et à l'utilisation des ressources susceptible d'expliquer sa capacité d'invasion plus faible. La thèse tâche également de déterminer si les hybrides sont intermédiaires entre les parents pour ces traits ou manifestent des propriétés originales susceptibles<p>d'entraîner un comportement plus invasif. Les traits fonctionnels pris en considération comprennent notamment l'architecture des parties aériennes, le SLA (surface foliaire spécifique), les teneurs foliaires en nutriments, la vitesse de décomposition des litières et la plasticité phénotypique de ces caractères. La stratégie scientifique repose sur trois approches complémentaires:<p>- des comparaisons in situ entre les taxons dans des sites ou ils coexistent;<p>- des cultures en conditions semi-contrôlées au jardin expérimental;<p>- une expérience de décomposition des litières.<p>Les résultats mettent en lumière la stratégie unique de capture et d'utilisation des ressources<p>de F. sachalinensis, ainsi que ses réponses plastiques moins adaptées (moins d'accroissement de la hauteur et de la surface foliaire totale en réponse a l'ombre, et de la biomasse et du nombre de tiges en réponse a une augmentation de la fertilité du sol). Cette stratégie contribue a sa capacité d'invasion plus faible en réduisant son efficacité d'utilisation et de capture de la lumière et des nutriments. D'autre part, l'hybride ne présente pas de valeurs transgressives pour les traits étudiés et est similaire à F. japonica en termes de traits et de plasticité. Toutefois, le nombre limité de<p>populations hybrides étudiées ne nous permet pas d'en conclure que l'hybride ne présente pas de<p>variation transgressive a l'échelle européenne. De plus, la variabilité génétique de l'hybride pourrait permettre une évolution future de sa capacité d'invasion, ce qui en fait une priorité pour la prévention et la gestion a l'échelle mondiale. / The objective of the thesis is to examine variation and evolution of functional traits that are susceptible to underlie variation of invasiveness in the invasive complex of Fallopia japonica, F. xbohemica and F. sachalinensis in Belgium. These three taxa originate from Asia and present a major interest in invasion ecology since they display contrasting invasiveness although they are part of the same hybrid complex, have the same life form and distribution area.<p>In particular, we ask if F. sachalinensis displays a specific combination of functional traits related to resource capture and use that is susceptible to explain its lower invasiveness. We also try to determine if the hybrids have intermediary trait values or if they show specific properties susceptible to increase their invasiveness. Functional traits measured include architecture, SLA (specific leaf area), nutrient foliar concentrations, litter decomposition rate and phenotypic plasticity of the same traits. Scientific strategy uses three different methods:<p>- in situ comparisons between the taxa in sites where they coexist;<p>- common gardens with semi controlled conditions;<p>- litter decomposition experiment.<p>Results show the unique strategy of F. sachalinensis concerning resource capture and use, as well as its less adaptive plastic responses (smaller increase of height and total leaf area in response to shade, and of biomass and shoot number in response to soil fertility). This strategy contributes to its lower invasiveness through a reduction in light and nutrient capture and use efficiency. The hybrid does not display transgressive variation for the studied traits and is similar to F. japonica concerning its traits and its plasticity. However, the limited number of hybrid accessions does not allow to conclude that the hybrid presents no transgressive variation throughout Europe. Moreover, genetic variability in the hybrid might allow future evolution of its invasiveness, making the hybrid a priority for prevention and management throughout the world. / Doctorat en Sciences / info:eu-repo/semantics/nonPublished

Marine non-native species threaten economic and environmental health, making it crucial to understand factors that make them successful. Research on these species, therefore, allows for greater preparedness and informed management of biological invasions and increases understanding of elements structuring biological communities. Among the marine non-native species, and particularly the fouling community, non-native ascidians are a taxon of particular concern because they can crowd out native benthic species and smother mariculture products. This thesis addresses management for ascidians and other fouling organisms and includes research on the invasiveness of this taxon in addition to the invasibility of recipient fouling communities. On the West Coast of the U.S., limited efforts have been made to coordinate biofouling management across states, despite the myriad vectors increasing propagule pressure over time along coastal states. Building on recent state and local efforts, I developed a Pacific Regional Biofouling Plan for the states of Oregon and Washington to help start a consensus-driven process by which these states could create a forum for more comprehensive coordination efforts, following California's lead. As states address authority gaps, the biofouling management framework I've written is meant to be used to guide the conversation between managers as various stages of coastal management are realized. To better inform the scope and efficacy of management and regulatory efforts, the study of invasions ecology asks and aims to answer questions regarding recipient community interactions and characteristics of the non-native species themselves. Studies that identify characteristics that make ascidians successful (invasiveness) and determine the influence native communities have on their success (invasibility) are important for assessing overall risk of establishment and spread from non-native ascidians. Therefore, I aimed to: 1) explore the hypothesis that fouling communities on suspended, artificial structures are more invasible than benthic habitats; and 2) identify characteristics influencing predation patterns on the native Distaplia occidentalis versus non-native ascidian species using mensurative and experimental studies in Charleston Marina, Oregon. I conducted a series of feeding assays, surveys, and a caloric content analysis. Feeding assays were conducted with a suite of predators. The flatworm predator (Eurylepta leoparda) was found to be highly selective on the native ascidian Distaplia occidentalis, and only preyed on whole colony samples. Feeding assay data suggest that test (tunic) structure or thickness may be an influential factor affecting nudibranch (Hermissenda crassicornis) predation rates on native versus non-native ascidians, with greater predation on the native ascidian species. Non-native ascidians may escape predation in floating but not benthic environments on the Oregon coast due to their palatability characteristics, likely tunic structure and low caloric content. In this case, this suite of predators may indirectly facilitate the invasion of docks but provide at least partial resistance to the invasion of natural benthic areas. The chapters herein address gaps in management and scientific knowledge regarding non-native species of the marine fouling community. Future work enhanced by my efforts could include the development of the coastal biofouling management plan, coordinated by the Western Regional Panel on Aquatic Invasive Species Coastal Committee, and broadening the geographic and taxonomic scope of my research with a more comprehensive study of predator-prey interactions involving non-native ascidians and a diverse suite of predators. These interactions may be an important factor in explaining the success of ascidians and other fouling organisms on floating structures and lack of success on nearby benthic substrata.

L'urbanisation est un processus complexe tant par les mécanismes historiques, sociaux, économiques et environnementaux qu'il implique que par les multiples modifications qu'il provoque au sein des écosystèmes. Ainsi, les paysages urbanisés sont soumis à des changements spatialement et temporellement abrupts des conditions environnementales comme la température au sol et dans l'air, la fragmentation des habitats et les concentrations de divers polluants. Pourtant, malgré leur apparente inhospitalité pour la biodiversité, les milieux urbanisés sont de véritables écosystèmes où de nombreuses espèces, natives et invasives, sont capables de survivre et même de prospérer. L‟ « écosystème urbain » est désormais considéré comme un élément important du fonctionnement des environnements densément peuplés, de la santé et du bien être humain ainsi que de la conservation de la biodiversité. De manière plus fondamentale, l'urbanisation, au même titre que le changement climatique et les processus d'invasions biologiques, est une « expérience grandeur nature » nous offrant l'opportunité de comprendre les règles d'assemblage des communautés biologiques, les processus de sélection d'habitat et de dispersion ou encore les processus évolutifs d'adaptation et de diversification. Ce travail s'inscrit dans ce cadre de pensée en se proposant d'étudier les conséquences écologiques et évolutives de l'urbanisation à différents niveaux d'organisations biologiques chez les Formicidae. Cette thèse comprend 4 chapitres s'organisant autour des thèmes et questions suivants : Chapitre 1 : Urbanisation et communautés biologiques : Comment l'urbanisation affecte-t-elle la distribution des espèces à l'échelle du paysage ? Chapitre 2 : Urbanisation et dispersion par l'être humain : Conceptualisation et modélisation du rôle des activités humaines et des réseaux de transports dans la dispersion d'espèces. Chapitre 3 : Urbanisation et interactions biotiques : L'urbanisation affecte-t-elle les patrons de co-invasions d'un couple invasif hôte-parasite introduits indépendamment ? Chapitre 4 : Urbanisation et variations intraspécifiques : Les populations urbaines et rurales présentent-elles des différences de traits biologiques ? Nos résultats démontrent qu'en tant que changement multifactoriel, l'urbanisation affecte de manière complexe la composition des communautés biologiques en modifiant de manière idiosyncrasique la distribution des espèces natives et invasives. En effet, chacune des 7 espèces de fourmis étudiées était affecté par une combinaison unique de facteur environnementaux associés à l'urbanisation (p.ex. fragmentation des milieux ouverts, température de surface) mais également au climat (Chapitre 1, Gippet et al. 2016 Urban Ecosystems). Parce qu'ils concentrent des activités humaines, les paysages urbanisés sont le théâtre de multiples invasions biologiques. En effet, l'être humain déplace de nombreuses espèces, leur permettant de franchir des barrières biogéographiques mais aussi de se propager au sein des paysages. Afin de provoquer la discussion autour du concept de la dispersion des espèces par l'Homme, nous proposons un nouveau point de vue général centré sur les activités humaines (Chapitre 2, Partie 1, Gippet et al. soumis) ainsi qu'un modèle de propagation secondaire d'espèce invasive par les activités humaines : MoRIS, dont la principale innovation est d'utiliser la structure du réseau de transport pour influencer la direction des événements de dispersion (Chapitre 2, Partie 2, Gippet et al. In prep). La suite est à retrouver sur la version téléchargeable du manuscrit / Urbanization is a complex process involving simultaneous changes in several environmental conditions, including ground and air temperature (urban heat island effect), habitat fragmentation and chemical pollution. These changes are often associated with biodiversity loss and changes in ecosystems functioning. However, more than a sink for biodiversity, urban areas constitute true ecosystems where many native and alien species survive and even grow stable populations. The “urban ecosystem” is now considered as an important element in the functioning of densely populated environments, in human health and well-being, as well as in biodiversity conservation. More fundamentally, urbanization constitutes “real life experiment” offering ecologists an opportunity to better understand ecological and evolutionary processes over fine spatial and temporal scale. This thesis investigates ecological and evolutionary consequences urbanization at different biological organization levels using ants (Formicidae) as biological models. First, at the biological community level, we showed that native and alien ant responses to urbanization were species-specific as each species was affected by its own set of environmental changes associated with urbanization (e.g., fragmentation, ground temperature) and climate. Second, we explored the little studied process of human-mediated dispersal by (i) proposing a novel theoretical framework focusing on human activities rather than directly on species and (ii) developing an innovative simulation model of dispersal by transport in terrestrial landscapes, MoRIS (Model of Routes of Invasive Spread). Third, we investigated how urbanization affected novel biotic interactions between an alien ant species (Lasius neglectus), an alien ectoparasite fungus (Laboulbenia formicarum) and native ant species. We showed that urbanization impacted the size of L. neglectus colonies, which were smaller in urban area, as well as L. formicarum prevalence on L. neglectus, which was higher in urban areas. Finally, we investigated intraspecific variations between urban and rural conspecifics of an urban tolerant species: Lasius niger. We found that urban young queens were smaller and lighter, less stressed by high temperature and performed multiple mating more often than rural young queens. In common garden, colony founding success were globally similar but urban incipient colonies produced significantly less pupae (and consequently workers). We also found that workers produced in common garden experiments were more variable in size (higher head width variance in both inter- and intra-colony) in urban colonies than in rural colonies. No evidence for genetic differentiation between urban and rural populations was found, suggesting that gene flow was not disrupted between urban and rural populations. All our results converge to a renewed vision of ecological and potential evolutionary dynamics occurring in urban environments. Further investigation will be necessary to assess how ecological processes influence evolutionary trajectories in urban ecosystems, using both ecological (e.g. ant densities and abundances along the urban gradient) and genomic approaches (e.g. using “genotyping by sequencing” methods to identify genes responsible for adaptation to urbanization)

Trois modèles invasifs à large répartition en Europe, le long d'un gradient latitudinal Norvège-Portugal, ont été choisis : Sargassum muticum, Codium fragile et Gracilaria vermiculophylla. Cette thèse a pour objectif l'étude de la phénologie, de l'écophysiologie et du métabolome de ces macrophytes invasifs face à une variation de facteurs environnementaux 1) à une échelle locale, 2) à l'échelle du gradient latitudinal (en lien avec le changement climatique global) ainsi que l'étude 3) des voies de valorisation possibles des métabolites de stress par bio-inspiration. Le gradient latitudinal, se traduisant par un gradient thermique, permet de mimer le réchauffement climatique car les conséquences de ce changement climatique sur les espèces en milieu naturel ne sont généralement appréciables qu'à l'échelle de dizaines d'années. Les suivis de l'écologie, dumétabolome ainsi que des impacts potentiels de ces espèces à une échelle locale en France, a permis d'étudier le développement et le cycle de vie des espèces. En particulier, G. vermiculophylla se caractérise par une phénologie spécifique (avec la prépondérance de petits fragments végétatifs, <3cm) en Rade de Brest et par une tolérance accrue à l'envasement jusqu'à 12 cm de profondeur en acclimatant son métabolome tout en maintenant une physiologie dormante. Cette espèce ingénieur impacte en profondeur l'écosystème vaseux de la Rade. Le suivi le long du gradient latitudinal a permis d'illustrer la plasticité phénologique des espèces et notamment un potentiel invasif contrasté de C. fragile entre les différentes latitudes. Lors de marée basse de vives eaux, les espèces présentent une acclimatation de leur photo-physiologie en fonction de la latitude avec la mise en évidence d'une photoinhibition du PSll, lié au stress engendré par les conditions environnementales.Enfin, ce travail a illustré les propriétés multifonctionnelles d'extraits enrichis en composés phénoliques, présentant des activités antioxydantes mais également photoprotectrices ou ostéogéniques, soulignant l'émergence de voies de valorisation originales par bio-inspiration pour divers secteurs tels que la cosmétologie et les biomatériaux en santé humaine. / Three model species with a large distribution along European coasts, along a latitudinal gradient from Norway to Portugal was chosen: Sargassum muticum, Codium fragile and Gracilaria vermiculophylla. The aims of this PhD thesis were to study the phenology, ecophysiology and the metabolom of these non-native marine macrophytes and their ability to cope with a variation of environmental factors 1) at a population scale, 2) along the latitudinal gradient (in relation with the global climatic change) and to propose 3) bio-inspired molecules for industrial purposes. The latitudinal gradient corresponding to a thermic gradient, allows to imitate the global warming as climatic change ¡mpacts are most of the time only visible at decennial scale.Monitorings of ecology, metabolome and potential impacts of these macroalgae, at a population scale, allowed to study the development and life cycle of these models. In particular, G. vermiculophylla exhibited a specific phenology (with a majority of small vegetative fragments, <3cm) in the Bay of Brest and a highly tolerance to burial until 12 cm depth in the sediment by acclimatizing its metabolome together with the ability to maintain a dormancy physiology. This engineer species modifies deeply muddy shores of this Bay. Latitunal gradients's monitoring highlighted the phenological plasticity and a contrasted invasive potential of C.fragile between latitudes. During low spring tides, species exhibited an acclimation of their photophysiology between latitudes with photoinhibition process related to induce environmental stress. Furthermore, this work showed the multifunctional properties of polyphenols enriched extracts with antioxidant, photoprotective or osteogenic activities, highlighting the emergence of original bio-inspired pathways for cosmetic or biomaterial applications.

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Thesis (MScConEcol)--UnStellenbosch University, 2011. / ENGLISH ABSTRACT: The privilege of utilising resources from the globe's marine ecosystems is threatened. Adequate regional and global conservation efforts are vital. Understanding species' distributions and the environmental variables influencing community structures are important for instigating optimum conservation plans. A major threat facing marine ecosystems is the introduction and proliferation of alien invasive species. The distribution and geographical expansion of marine alien invasive species, along with environmental variables driving their increase is also critical for drawing up conservation plans. In response to this point, this study addresses gaps in our knowledge regarding intertidal marine invertebrate species distributions particularly that of marine alien species in the Kogelberg Biosphere Reserve (KBR) and adjacent Betty's Bay Marine Protected Area (MPA) in the Western Cape of South Africa, a prime area for south-coast marine conservation. Species identifications were done in September 2010. Two marine alien invertebrate species were identified along the coastline. These were the invasive mytilid Mediterranean mussel Mytilus galloprovincialis and the bryozoan Watersipora subtorquata. A quantitative systematic survey of the intertidal region, consisting of seven rocky shore sites was then undertaken from October 2010 to December 2010. The abundance of all focal marine invertebrate species, within six selected habitat types was assessed. Environmental variables were also recorded. Statistical tests were done to investigate for significant interaction in mean abundance and mean species richness among intertidal zones and protection status (MPA and non-MPA), and among intertidal sampling units (SU‟s) and protection status. There was also investigated for significant difference in mean abundance and mean species richness across intertidal zones and habitat types where protection status was not taken into account, and to test for significant differences in mean abundance and mean species richness between the intertidal zones and habitat types. Correspondence analyses were used to illustrate relationships between species composition and the defined environmental variables. Tests were done to investigate for significant differences in mean abundance of the identified marine alien species between the MPA and non-MPA, study sites, SU's, and wave exposures. These results indicated that vertical and horizontal stress gradients along the shore mainly influence abundance and species richness. The significantly higher abundance of M. galloprovincialis outside the MPA is due to its preference for wave-exposed areas. The reason for the difference in the total abundance of W. subtorquata in the different habitats is not clear, although it appears that the higher abundance of this species in the MPA is because the sheltered nature of the MPA. M. galloprovincilais displaces indigenous species. W. subtorquata does not cause any significant harm along the coast of South Africa. This study indicates that the abundance of M. galloprovincialis and W. subtorquata in the MPA is relatively low. The MPA is therefore in good condition with regards to intertidal alien species. It is important that the MPA and adjacent KBR's coastline maintain its current pristine status. / AFRIKAANSE OPSOMMING: Die voorreg om mariene hulpbronne te benut, word bedreig. Voldoende nasionale en globale mariene bewaring is krities. 'n Deeglike kennis van spesies verspreiding en omgewingsveranderlikes wat gemeenskapstrukture beïnvloed is noodsaaklik vir optimale bewaringspogings. Mariene indringerspesies en verspreiding van indringerspesies bedreig mariene ekosisteme. Dit is belangrik om basiese kennis in te win oor die geografiese verspreiding van indringerspesies saam met die omgewingsveranderlikes wat hierdie verspreiding beïnvloed. Hierdie studie fokus dus daarop om die kennis met betrekking tot intergety ongewerwelde spesiesverspreiding, veral dié wat uitheems is langs die kus van die Kogelberg Biosfeer Reservaat (KBR) en aangrensende Bettys Baai Mariene Beskermde Gebied (MBG) in die Wes-Kaap in Suid-Afrika uit te brei. Hierdie streek word beskou as gesog vir mariene bewaring in Suid-Afrika. Identifikasie van spesies is in September 2010 gedoen. Twee intergety uitheemse ongewerwelde spesies is langs die kus geïdentifiseer; die indringer 'mytilid' Mediterreense mossel - Mytilus galloprovincialis en die 'bryozoa' Watersipora subtorquata. 'n Kwantitatiewe sistematiese oorsig van die intergety rotsagtige streek, bestaande uit sewe lokaliteite, is gedoen. Steekproefneming is vanaf Oktober 2010 tot Desember 2010 uitgevoer. Alle fokale intergety ongewerwelde spesies, in ses geselekteerde habitattipes is getel. Omgewingsveranderlikes is aangeteken. Daar is statisties getoets vir verskille in die talrykheid en spesiesrykheid tussen die intergety zones en beskermingsstatus (MBG en nie-MBG), en tussen die intergety habitattipes en beskermingsstatus. Daar is ook getoets vir verskille in talrykheid en spesiesrykheid tussen die intergety zones en habitattipes waar beskermingsstatus nie in ag geneem is nie. Ooreenstemmende analises is gedoen om die verhoudings tussen die spesiesamestelling en die gedefinieerde omgewingsveranderlikes te illustreer. Daar is statisties getoets vir verskille in die talrykheid van die geïdentifiseerde uitheemse spesies tussen die MBG en nie-MBG, die verskillende lokaliteite, die verskillende habitattipes en tussen die verskillende golf blootstellings. Hierdie studie dui aan dat vertikale en horisontale stresgradiënte die hoofoorsaak is wat talrykheid en spesiesrykheid beïnvloed. Die aansienlik hoër talrykheid van M. galloprovincialis buite die MBG is van die gebied se hoër golfblootstelling. Die beduidende verskil in talrykheid van W. subtorquata is onduidelik. Dit kan egter afgelei word dat die beskutte aard van die MBG 'n rol speel by die aansienlik hoër talrykheid van hierdie spesie binne die MBG. M. galloprovicialis verplaas inheemse spesies. Geen beskikbare bewys dui daarop dat W. subtorquata enige beduidende skade langs die kus van Suid-Afrika aanrig nie. Die lae talrykheid van beide hierdie spesies binne die MBG dui daarop dat hierdie unieke area steeds in goeie toestand ten opsigte van intergety uitheemse spesies is. Dit is noodsaaklik dat die huidige status van die MBG en aangrensende kuslyn gehandhaaf word.

Thesis (MSc)--Stellenbosch University, 2008. / ENGLISH ABSTRACT: Alien trees, Pinus spp. and Eucalyptus spp., affect ants negatively in the Cape Floristic Region (CFR), a global biodiversity hotspot in South Africa. They reduce ant abundance and species richness, thus also changing ant assemblage structure. This is alarming, because almost 1300 species of plant species in the CFR are dispersed by certain indigenous ants, and thus there is concern for an indirect effect on indigenous plant assemblages. One of the most impacting ant species on seed dispersal is the invasive Argentine ant (Linepithema humile (Mayr)), which discards seeds outside its nest, where they do not germinate. Ten sites, on Vergelegen Wine Estate, were selected to explore these effects of alien plants. These varied from invaded to non-invaded sites. Each site consisted of six sampling points, which in turn consisted of four pitfall traps left out for seven days, during December 2005, February 2006, May 2006 and September 2006. Forty species of ant were sampled, and various analyses used to illustrate the comparative effects of plant invasion. All analytical methods showed that invasive alien plants had a significant impact on the abundance and richness of the ant species assemblage, by creating a dense canopy cover that changed the abiotic environment of the epigaeic ants’ habitat. Furthermore, increased alien tree invasion correlated significantly with Argentine ant abundances. The Argentine ant displaced Pheidole capensis and Camponotus spp., while it decreased the abundances of commonly-occurring indigenous ants, such as Lepisiota capensis and Plagiolepis spp. Displacement by the Argentine ant may be a result of indirect competition for food resources. The effects of invasive aliens are synergistic in that there is a cascade effects from initial plant invasions to subsequent animal invasion. / AFRIKAANSE OPSOMMING: Indringer bome, Pinus en Eucalyptus, affekteer miere op negatiewe wyse in die Kaap Florsitiese Streek (KFR), ‘n area in Suid Afrika van belang t.o.v. globale biodiversiteit. Hierdie uitheemse indringer bome verminder hulle hoeveelheid en spesies rykheid. Die bogenoemde is kommerwekkend omdat meer as 1300 plant spesies in the KFR versprei word deur miere. Die verandering in hoeveelheid en versameling van inheemse miere kan dus ernstige implikasies hê op die saad verspreiding van inheemse plant spesies. Een van die mees verwoestende effekte op saad verspreiding is veroorsaak deur die indringer Argentynse mier (Linepithema humile (Mayr)), wat sade neer werp buite hulle neste, waar hulle nie suksesvol kan ontkiem nie. Tien monsterings-tereine was geselekteer om die bogenoemde effekte te ondersoek op Vergelegen Landgoed. Hierdie het afgewissel van indringer tot skoon tereine. Elke terrein is op ses versamelings-plekke gemonster, met vier pitvalle, wat oopgelê het vir sewe dae gedurende Desember 2005, Februarie 2006, Mei 2006 en September 2006. 40 spesies van miere was gemonster. Indringer plante het ‚n betekenisvolle impak gehad het op die hoeveelheid en rykheid van die mier gemeenskappe, deur die skepping van ‚n dig baldakyn wat die abiotiese omgewing van die miere se habitat verander het. Die vermeerdering van indringer plante veroorsaak die vermeerdering van Argentyne miere. Kanonieke Mede-Respons Analise illustreer dat die Argentynse mier Pheidole capensis en Camponotus spp. verplaas het, terwyl dit ander inheemse mier getalle verminder het, soos Lepisiota capensis en Plagiolepis spp. Die verplasing deur die Argentynse mier mag die resultaat wees van indirekte wedywering vir hulpbronne. Die effekte van indringer species is dus sinergisties deur dat ‚n kaskade effek ontstaan vanaf plant tot dier indringer spesies.

Thesis (PhD)--Stellenbosch University, 2010. / ENGLISH ABSTRACT: Biological invasions are a growing threat to biodiversity, trade and agriculture in South Africa. Though alien reptiles and amphibians (herpetofauna) are not currently a major issue, escalating problems worldwide and increased trade in South Africa suggest a possible increase in future problems. In this thesis I explore practical measures for risk assessment implementable under national legislation. I began by documenting record-keeping and legislative differences between provinces in South Africa. This revealed some serious deficiencies, complicating attempts to compile accurate inventories and discern import trends. International trade data, however, revealed an exponential increase in the number of imports to South Africa over the last 30 years. Characterising the abundance of species in this trade is important as species introduced in large numbers pose a higher establishment risk. In South Africa, I found a tendency for venomous and expensive species to be traded in low numbers, whereas species that are easy to breed and handle, or that are colourful or patterned are traded in higher numbers. Unlike South Africa, California and Florida have had a large number of well-documented herpetofaunal introductions. These introductions were used to verify the role of several key predictors in species establishment. I first evaluated the role of each variable separately. I examined different approaches for bioclimatic modelling, the predictive power of different sources of distribution data, and methods of assigning a climate-match score. I also present the first test of Darwin’s naturalization hypothesis for land vertebrates using two new phylogenies inferred for native and introduced reptiles in California and Florida. I then used boosted regression trees (BRT) to infer the relative contribution of each factor to species establishment success. Results from the BRTs were incorporated into a user-friendly spreadsheet model for use by assessors inexperienced in complex modelling techniques. Introduction effort was found to be the strongest contributor to establishment success. Furthermore, species with short juvenile periods were more likely to establish than species that started breeding later, as were species with more distant relatives in regional biotas. Average climate match and life form were also important. Of the herpetofaunal groups, frogs and lizards were most likely to establish, while snakes and turtles established at much lower rates, though analysis of all recorded herpetofaunal introductions shows slightly different patterns. Predictions made by the BRT model to independent data were relatively poor, though this is unlikely to be unique to this study and can be partially explained by missing data. Though numerous uncertainties remain in this field, many can be lessened by applying case by case rules rather than generalising across all herpetofaunal groups. The purpose for import and potential trade volume of a species will influence the threat it poses. Considering this in conjunction with a species’ environmental tolerances and previous success of species with similar life histories, should provide a reasonable and defendable estimate of establishment risk. Finally, a brief summary of the potential impacts of introduced alien herpetofauna is provided in the thesis. / AFRIKAANSE OPSOMMING: Indringer spesies hou ‘n al groter bedreiging in vir die biodiversiteit, handel en landbou van Suid- Afrika. Alhoewel uitheemse reptiele en amfibieërs (herpetofauna) tans nie ‘n groot bedreiging in Suid-Afrika is nie, dui groeiende probleme wêreldwyd asook 'n toename in plaaslike handel op moontlike toekomstige probleme. In hierdie tesis, ondersoek ek praktiese metodes vir risikobepaling wat onder nasionale wetgewing toegepas kan word. Ek begin deur die verskille in stoor van rekords en wetgewing tussen provinsies te dokumenteer. Hierdie proses het ernstige tekortkominge uitgewys, wat pogings om akkurate inventarisse saam te stel en invoertendense te bepaal, bemoeilik. Internasionale handelsdata het egter getoon dat daar ‘n eksponensiële toename in die hoeveelheid invoere na Suid-Afrika oor die laaste 30 jaar was. Die hoeveelheid spesies in hierdie handel is belangrik omdat spesies wat in groot hoeveelhede ingevoer word, ‘n hoër vestigingsrisiko het. In Suid-Afrika is ‘n tendens gevind vir handel in giftige en duur spesies teen lae hoeveelhede, terwyl spesies wat maklik teel, maklik hanteer kan word en kleurvol is of mooi patrone het, in groter hoeveelhede mee handel gedryf word. Kalifornië and Florida, in teenstelling met Suid-Afrika, het ‘n hoë aantal goed-gedokumenteerde gevalle van herpetofauna wat in die natuur vrygestel is. Hierdie introduksies was gebruik om die rol van verskeie belangrike faktore in die vestiging van populasies te bepaal. Eerstens het ek die rol van elke faktor apart ondersoek. Ek het verskillende benaderinge vir bioklimatiese model-bou ondersoek, die akuraatheid van verskillende bronne van distribusiedata getoets en drie metodes om ‘n “climate match score” te bereken, voorgestel. Ek bied ook die eerste toets van Darwin se naturalisasie-hipotese vir landwerveldiere aan, deur gebruik te maak van twee nuwe filogenieë wat ek gebou het vir inheemse en ingevoerde reptiele in Kalifornië en Florida. Ek het verder gebruik gemaak van “boosted regression trees” (BRT) om die relatiewe bydrae van elke faktor tot die vestigings-potensiaal van spesies te bepaal. Resultate van hierdie BRTs was ingekorporeerd in ‘n gebruikersvriendelike ontledingstaat wat deur bestuurders, onervare in komplekse modelboutegnieke, gebruik kan word. Invoer-hoeveelheid was die faktor wat die sterktste bygedra het tot suksesvolle vestiging. Verder is spesies met kort jeugperiodes en dié met verlangse familie in streeks-biotas, meer geskik om suksesvol te vestig. Gemiddelde klimaatooreenstemming en lewensvorm was ook belangrik. Paddas en akkedisse was die mees waarskynlikste van die herpetofauna groepe om populasies te vestig, terwyl slange en skilpaaie teen laer tempo’s populasies gevestig het, alhoewel analise van alle gedokumenteerde gevalle van herpetofauna-invoerings wêreldwyd effens verskillende tendense toon. Voorspellings wat deur die BRT-model vir onafhangklike data gemaak is was redelik swak, alhoewel hierdie resultaat onwaarskynlik nie uniek aan die studie is nie, en word gedeeltelik verduidelik deur die gebrek aan data. Alhoewel talle onsekerhede steeds bestaan, kan dié verminder word deur geval-tot-geval reëls toe te pas eerder as om vir herpetofauna as ‘n groep te veralgemeen. Die doel van invoer en potensiële handel-volumes van ‘n spesie, sal die bedreiging wat die spesie toon, bepaal. Hierdie faktore moet saam met omgewingstoleransie en voorafgaande sukses van spesies met soortgelyke lewenswyses oorweeg word, om ‘n aanvaarbare en verdedigbare beraming van vestigingsrisiko te gee. Laastens, word ‘n kort opsomming van die effekte wat uitheemse herpetofauna mag hê, verskaf.