Parental care can be important especially in passerine birds and can depend on environment, food availability and behaviour. A behaviour that can affect the food supply for the offspring is neophobia, the fear of novel objects. The more fear the bird exhibits the less it visits the nest with food. In my study I aimed to examine neophobia and how it differed based on sex and if offspring number and weight influenced the behaviour. Video recordings of collared flycatchers nest boxes were used to see how the behaviour differed by placing a novel object on the nest box. The behaviours tested were duration of perching, hovering and visit including latency and frequency of visit. The results showed that there was a significant difference between the sexes in duration, latency, and frequency of visit but also duration of perching before and after placing a novel object on the nest box. In addition, my results showed that nestling weight significantly influenced frequency of visit and nestling number influenced duration of visit. The study shows that the collared flycatchers do express neophobia differently based on the sex and the nestling’s weight and number. Future studies could investigate if neophobia is a plastic behaviour and the effects of prolonged exposure to novel objects whichcould change the offspring’s survival chances or even the nestling’s behaviour.

Abstract Animals need information about local conditions to make optimal fitness-enhancing decisions such as where to breed. Information can be acquired by personal sampling of the environment, but it can also be acquired from other individuals. The latter is termed social information use. Social information use has gained a lot of attention in modern ecology because it affects principal ecological phenomena such as animal distribution and resource use. Social information use is not restricted to obviously cognitive mammals and birds but is also found in e.g. reptiles, fish and insects. Social information use studies have thus far been concentrated on situations with one social information user and one (often the same) source species. The community-wide consequences of social information use have almost exclusively been considered in theoretical studies. In this thesis, I studied empirically social information use in the nest site selection within and between species in a cavity-nesting bird community consisting of the collared flycatcher (Ficedula albicollis), the great tit (Parus major) and the blue tit (P. caeruleus). I studied social information use on two time scales: social information gathered just before a breeding attempt, and social information gathered already during the previous breeding season for the following year’s breeding attempt. I used experiments in which different white geometric symbols represented nest site choices of earlier settled tutors and empty nest boxes, and I observed the symbol choices of later-breeding individuals. The symbol approach eradicates bias from innate and learned preferences enabling strong inference. My results demonstrate that collared flycatchers use social information from both con- and heterospecific tutors in different situations in a flexible manner. Hence, social information use seems to be context-dependent. Furthermore, I show that great tits avoid choosing nest site characteristics which were associated with either con- or heterospecifics nests the previous year and prefer symbols which depicted an empty nest box the previous year, probably to avoid nest ectoparasites. I also show that in great tits the male has greater influence on nest site selection than previously assumed even though the female builds the nest. My thesis deepens our understanding about the complexity of social information use and highlights its significance in future ecological research. / Tiivistelmä Eläimet tarvitsevat informaatiota paikallisista olosuhteista tehdäkseen edullisia päätöksiä esimerkiksi siitä, missä lisääntyä. Informaatiota voidaan hankkia tutkimalla ympäristöä itse, mutta sitä voidaan hankkia myös muilta yksilöiltä. Jälkimmäistä kutsutaan sosiaaliseksi informaatioksi. Eläinten sosiaalisen informaation käyttö on saavuttanut viime aikoina paljon huomiota ekologisessa tutkimuksessa, koska se vaikuttaa tärkeisiin ekologisiin ilmiöihin, kuten eläinten levinneisyyteen ja resurssien käyttöön. Sosiaalinen informaation käyttö ei rajoitu vain nisäkkäisiin ja lintuihin, vaan sitä on havaittu myös esimerkiksi matelijoilla, kaloilla ja hyönteisillä. Sosiaalisen informaation käyttöä on tutkittu lähes yksinomaan lajien sisällä tai käyttäen ainoastaan yhtä sosiaalisen informaation lähdelajia. Yhteisötason vaikutuksia on pohdittu miltei pelkästään teoreettisissa tutkimuksissa. Tässä väitöskirjatyössä tutkin kokeellisesti sosiaalisen informaation käyttöä pesäpaikan valinnassa lajin sisällä ja lajien välillä kolopesivien lintujen yhteisössä sepelsiepolla (Ficedula albicollis), talitiaisella (Parus major) ja sinitiaisella (P. caeruleus). Otin tutkimuksissani huomioon kaksi aikatasoa: tutkin juuri ennen pesimisyritystä kerätyn sekä jo edellisen lisääntymiskauden aikana seuraavan vuoden pesintää varten hankitun sosiaalisen informaation käyttöä. Kokeissani käytin linnunpönttöihin kiinnitettyjä erilaisia valkoisia geometrisia symboleita, jotka edustivat aiemmin pesinnän aloittaneiden lintujen eli tuutoreiden pesäpaikanvalintoja. Seurasin tämän jälkeen myöhemmin pesimään saapuvien parien symbolivalintoja. Tulosteni perusteella sepelsiepot hankkivat sosiaalista informaatiota sekä lajitovereiltaan että tiaisilta joustavasti eri tilanteissa. Lisäksi osoitan, että talitiaiset välttävät valitsemasta pesäpaikkoja, jotka olivat asuttuina edellisenä vuonna, ja suosivat sellaisia pesäpaikkoja, joissa ei pesitty edellisenä vuonna - todennäköisesti välttääkseen kirppuja ja muita pesäloisia. Osoitan myös, että talitiaiskoirailla on suurempi vaikutus pesäpaikan valintaan kuin aikaisemmin on oletettu, vaikka naaraat rakentavat pesän. Väitöskirjatyöni syventää käsitystämme sosiaalisen informaation käytön monitahoisuudesta eläinkunnassa ja korostaa sen merkitystä ekologisessa tutkimuksessa.

La dispersion, c’est-à-dire le déplacement d’un individu entre deux sites de reproduction, est un processus clé pour la dynamique des métapopulations et les flux de gènes. Son succès peut être modulé par des différences de phénotype ou syndromes de dispersion. Cependant, les contraintes environnementales (externes) et physiologiques (internes) qui sous-tendent ces syndromes restent mal connus. Ce projet vise à clarifier l’impact des variations environnementales et des contraintes oxydatives (liées aux espèces réactives de l’oxygène produites durant la respiration) sur les phénotypes associés à la dispersion chez un passereau, le gobemouche à collier Ficedula albicollis. La demande énergétique a été expérimentalement (i) augmentée en manipulant la surface alaire ou (ii) diminuée par une supplémentation en nourriture. L’équilibre oxydo-réducteur des gobemouches en reproduction est influencé par des interactions complexes entre facteurs intrinsèques (statut de dispersion) et extrinsèques (densité de couples reproducteurs, année, traitement expérimental). La capacité antioxydante dépend principalement des différences permanentes entre individus, alors que les pro-oxydants présentent de grandes variations intra-individu. Les variations environnementales et les contraintes énergétiques modulent aussi les différences de succès reproducteur et de comportement parental liées au statut de dispersion. Nos résultats confirment que les oiseaux dispersants et philopatriques diffèrent dans leur gestion de l’équilibre oxydo-réducteur lorsqu’il est en compétition avec l’investissement reproducteur. Ces différences pourraient avoir des conséquences à long terme sur la valeur sélective et compenser les différences de succès reproducteur entre individus dispersants et philopatriques dans les habitats de faible qualité. Ce travail souligne que les traits associés à la dispersion sont souvent déterminés par des normes de réaction à l’environnement et non des différences fixées entre individus, et améliore notre compréhension des syndromes de dispersion / Dispersal, i.e. individual movement between breeding sites, is a key process for metapopulation dynamics and gene flow. Its success can be modulated by phenotypic differences between dispersing and philopatric individuals, or dispersal syndromes. However, the environmental (external) and physiological (internal) constraints underlying such syndromes remain poorly known. This project aimed at clarifying the impact of environmental variation and oxidative constraints, linked to the reactive oxygen species produced during respiration, on phenotypes associated to dispersal in a passerine bird, the collared flycatcher Ficedulla albicollis. Energetic demand was experimentally (i) increased through a wing load manipulation or (ii) relieved through food supplementation. The oxidative balance of breeding flycatchers was influenced by complex interactions of dispersal status and extrinsic factors (breeding density, year, experimental treatments). Interestingly, antioxidant capacity was influenced both by permanent individual differences and by food availability, whereas measures of pro-oxidants were highly variables within individuals. Environmental variation and energetic constraints also modulated the differences in reproduction associated with dispersal: dispersing and philopatric birds differ in their management of the oxidative balance when it is competing with reproductive investment. This thesis highlights that reaction norms, rather than fixed differences, often shape traits associated to dispersal

L’évolution divergente est un processus clef générant de la biodiversité. Elle peut avoir lieu entre localités, via la réduction des flux de gènes, et au sein des localités via la spécialisation écologique. Dans le cas des systèmes parasitaires multi-hôtes, l’adaptation dépend des taux relatifs de flux de gènes des hôtes et des parasites entre différentes localités, ainsi que des échanges locaux de parasites entre différents types d’hôtes. En combinant génétique des populations et expérimentations sur le système composé de la puce Ceratophyllus gallinae et deux de ses hôtes, la mésange charbonnière Parus major et le gobe-mouche à collier Ficedula albicollis dans un habitat fragmenté, nous avons examiné comment l’adaptation et l’isolation génétique façonnent l’évolution des parasites. Nous avons aussi testé comment les choix d’habitat des hôtes pouvaient influencer la rencontre avec des populations de parasites spécialisées. Les analyses de microsatellites révèlent que les populations de puce sont différenciées à une échelle spatiale fine, et fréquemment entre espèces hôtes. De plus, des populations de parasites semblent adaptées à chaque type d’hôte. Cependant, aucune variation dans les choix d’habitats par rapport aux parasites n’a été observée chez les hôtes. Enfin, la réponse des hôtes aux parasites variait entre nos deux zones réplica ; l’histoire des populations d’hôtes pourrait donc influer sur la coevolution avec leurs parasites. Ce système semble donc localement façonné à la fois par une isolation génétique et une sélection par différents hôtes. L’étude de nouveaux sites permettraient d’évaluer si cette évolution divergente peut être génératrice de biodiversité / Divergent evolution is a key process generating biodiversity. This can occur between localities, through reduced gene flow followed by local adaptation or genetic drift, and within localities through ecological specialization. In the case of multi-host parasite systems, adaptation can be driven by the relative rate of host-parasite gene flow among spatially isolated populations, and the amount of parasite exchange among local host types. Combining population genetics and field experiments, we examined how adaptation and genetic isolation shape parasite evolution. Focusing on the hen flea Ceratophyllus gallinae, a presumed host generalist, and two of its hosts, the great tit Parus major and the collared flycatcher Ficedula albicollis, we investigated parasite population structure and adaptation within a fragmented landscape. Additionally, we tested how hosts can influence encounter rates with specialized flea populations through their habitat choice. Neutral markers analyses show that flea populations are genetically differentiated at fine spatial scales, and frequently between the two host species. Evidence for parasite adaptation to each host type were also observed. Host specialization may therefore be ongoing in hen fleas. However, birds did not show specific habitat choice strategies regarding flea-infested nests. Host responses differed between two replicate sites, indicating that local population history may impact parasite evolution. Both isolation and host-based selection are therefore acting on hen flea populations at a local scale. Investigations in new localities will help to assess to what extend this divergent evolution may generate biodiversity

Individuals vary from each other in their genetic content. Genetic diversity is at the core of the evolutionary theory. Rooted in a solid theoretical framework developed as early as the 1930s, current empirical observations of genomic diversity became possible due to technological advances. These measurements, originally based on a few gene sequences from several individuals, are becoming possible at the genome scale for entire populations. We can now explore how evolutionary forces shape diversity levels along different parts of the genome. In this thesis, I focus on the variation in levels of diversity within genomes using avian systems and in particular that of the collared flycatcher (Ficedula albicollis). First, I describe the variation in genetic diversity along the genome of the collared flycatcher and compare it to the amount of variation in diversity across individuals within the population. I provide guidelines on how a small number of makers can capture the extent of variability in a population. Second, I investigate the stability of the local levels of diversity in the genome across evolutionary time scales by comparing collared flycatcher to the hooded crow (Corvus (corone) corone). Third, I study how selection can maintain variation through pervasive evolutionary conflict between sexes. Lastly, I explore how shifts in genome-wide variant frequencies across few generations can be utilised to estimate the effective size of population.

<p>This thesis examines parental condition, how it is traded off against reproduction and how it is displayed in a secondary sexual trait. The studies were performed on nest-box breeding collared flycatchers Ficedula albicollis on the island of Gotland, in the Baltic Sea. Early breeding and high fitness were found to be associated with high levels of glycosylated haemoglobin possibly governed by migratory exertion and infectious disease. In order to test if immune function is expressed in secondary sexual traits and how it is traded off against reproductive effort a series of experiments were performed, in which birds were challenged with an antigen, via a vaccine containing neutralised paramyxovirus. The forehead patch of the male collared flycatcher serves as a badge of status and is under sexual selection. Good condition, as reflected in strong immune response and low levels of blood parasites was found to be associated with bigger patch size. Patch size was also found to vary in size within the same breeding season in a pattern predictable from immune response data. Immune response, in itself, was found to be costly in terms of reduced survival, confirming that trade-offs involving suppression of immune response may increase fitness. Mating effort was found to be traded off against immune function and moult. Experimental brood size manipulations revealed a trade-off females between number of offspring and immune function. Thus I suggest a set of parameters useful for condition estimation. I also show that immune response is costly and, second, that pathogen resistance probably plays an important role in the shaping of secondary sexual traits and life-history decisions.</p>

This thesis examines parental condition, how it is traded off against reproduction and how it is displayed in a secondary sexual trait. The studies were performed on nest-box breeding collared flycatchers Ficedula albicollis on the island of Gotland, in the Baltic Sea. Early breeding and high fitness were found to be associated with high levels of glycosylated haemoglobin possibly governed by migratory exertion and infectious disease. In order to test if immune function is expressed in secondary sexual traits and how it is traded off against reproductive effort a series of experiments were performed, in which birds were challenged with an antigen, via a vaccine containing neutralised paramyxovirus. The forehead patch of the male collared flycatcher serves as a badge of status and is under sexual selection. Good condition, as reflected in strong immune response and low levels of blood parasites was found to be associated with bigger patch size. Patch size was also found to vary in size within the same breeding season in a pattern predictable from immune response data. Immune response, in itself, was found to be costly in terms of reduced survival, confirming that trade-offs involving suppression of immune response may increase fitness. Mating effort was found to be traded off against immune function and moult. Experimental brood size manipulations revealed a trade-off females between number of offspring and immune function. Thus I suggest a set of parameters useful for condition estimation. I also show that immune response is costly and, second, that pathogen resistance probably plays an important role in the shaping of secondary sexual traits and life-history decisions.

In nature, environments are often variable and heterogeneous influencing ecological and evolutionary processes. This thesis focus on how animals interact with their environment and how that affects the reproductive decisions they make. Using empirical data collected from wild collared flycatcher populations, experiments and molecular approaches I try to unveil some of these relationships and the evolutionary, ecological and conservation implications of these findings are discussed. Firstly, collared flycatchers were shown to use breeding densities of their own and other species using similar resources when assessing costs and benefits associated to breeding in specific habitats. However, species will vary in how informative they are, and the worst competitor – with whom you overlap most in resources needs – also provides the best source of information. Collared flycatcher parents will also benefit differentially from investments in sons and daughters due to habitat characteristics and dispersal differences between the sexes. Here, I show that they will produce more of the sex that will give the highest expected fitness return given the environment they are in. These results also provide a reciprocal scenario to Clark's (1978) classical study of sex ratio adjustment in relation to local resource competition (LRC), as more of the natal philopatric sex is produced when LRC is low. Secondly, the effect of elaborated ornaments on paternity in the socially monogamous collared flycatcher was shown to be of more importance in areas where the intensity of intra- and intersexual conflicts are expected to be elevated. Hence, ornamentation by environmental interactions determines paternity, illustrating that sexual selection through extra-pair paternity is context dependent. Finally, even though the collared flycatcher populations that this thesis is based on have been studied on their breeding grounds for more then 25 years, we know little of where they are when they are not breeding. Here, stable isotope signatures in winter-grown feathers suggests that they may spend their winter with their breeding ground neighbours and do so repeatedly over years. Differences between breeding populations at this small scale should have many impactions for evolutionary and ecological processes as it will, for example, determine with whom individuals interact throughout their life.

Climate change is affecting the distribution of species, sometimes making previously separated species come into secondary contact. For closely related species, this often leads to competition and sometimes also hybridization, which can have negative effects on genetic bio? diversity. Collared flycatcher (Ficedula albicollis) and pied flycatcher (Ficedula hypoleuca) are two closely related species that hybridize where they meet on the Swedish islands Gotland and Öland. Studies from Gotland and the north of Öland have shown that the pied flycatcher is outcompeted and displaced from favourable, high-quality habitat by the collared flycatcher, leading to a decrease in the number of pied flycatchers in deciduous forest. However, this has not been shown for the ecologically important and one of the largest deciduous forests in Sweden, the Mittland forest located in central Öland. Here I use census data collected during two periods separated by 37 years from the Mittland forest to investigate habitat choice and competition between the two species. Although the number of collared flycatcher has greatly increased in the area, I show that the collared flycatcher has not outcompeted the pied flycatcher from favourable habitat. I also show that pied flycatcher does not have a preference for coniferous forest. Lastly, I show that the two species have a near complete overlap of habitat niches. These results indicate that they are in direct competition over the favourable habitat, that there is no equilibrium between the species and the collared flycatcher might still be expanding in the Mittland forest. Allowing more time to pass and further research will show if the pied flycatcher will be displaced from the high-quality habitats in this area or not.

<p>Studies of hybrid zones offer important insights into the process of speciation. Much of the knowledge to be gained is dependent on an accurate estimation of the strength of pre- and post-zygotic isolation between hybridizing taxa. My results demonstrate that hybridization can variously affect different components of fitness. In Ficedula flycatchers, late-breeding females may directly benefit from pairing with a heterospecific male by gaining access to superior territories. The hybrid offspring possess an immune system that is as equally well functioning as in the parental species (the collared, F. albicollis, and pied flycatcher, F. hypoleuca). However, I found that a severe reduction in fertility persists for at least three generations after the actual hybridization event. Combining all information about the reproductive success of hybridizing individuals and their descendents revealed that postzygotic isolation between flycatchers is very strong; hybridizing individuals leave almost no descendents. This thesis presents one of few comprehensive summaries of the selection for/against assortative mating in a natural hybrid zone. These findings suggest a central role for intrinsic postzygotic isolation as a reproductive barrier separating newly evolved bird species, and contrast previous suggestions that postmating isolation is the slowest of the reproductive barriers to evolve in birds.</p><p>Despite this strong selection against hybridization, pre-mating isolation is incomplete. Hybridization often results from females lacking conspecific partners, but appears to be also caused by errors in species recognition. Much of this error probably reflects the short period of time that pied flycatchers on Gotland and Öland have been in sympatry. Compared to collared flycatchers, pied flycatchers are poorer able to discriminate between conspecific and heterospecific song, and male pied flycatchers more often falsely signal their own identity through heterospecific song copying. However, despite colonising the study site from other sympatric populations and having very little gene flow from allopatry, collared flycatchers also possess traits (e.g. delayed plumage maturation) that increase their hybridization risk. Once pre-mating isolation is strong, the rarity of hybridization probably inhibits further selection against traits promoting interspecific mating, especially when such traits may be beneficial in other contexts. This thesis highlights complex interactions between factors affecting hybridization rate that would not be detected if such a study were not field-based. Furthermore, it showcases likely examples in nature of a number of theoretical objections to the evolution of pre-mating barriers between populations living in sympatry.</p>