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Interaction of the adhesion GPCR CIRL with ionotropic pathways during mechanosensationDahlhoff, Stefan 27 June 2022 (has links)
The sensation of mechanical signals is vital for all animals. For this task Drosophila larvae are equipped with chordotonal organs. These are specialized mechanosensory organs which are composed of multicellular subunits. In this study I show how metabotropic signaling by the adhesion GCPR CIRL interacts with part of the ionotropic pathways during mechanosensation in sensory neurons of the pentascolopidial chordotonal organ (lch5). CIRL modulates cAMP levels in sensory neurons and thereby shapes the receptor potential response to mechanical stimuli. Here, CIRL forms a functional interaction with the TRP channel NOMPC in which nompC is epistatic to Cirl. Furthermore, the evidence presented suggest the presence of another target of CIRL and the involvement of a further signaling pathway besides cAMP modulation. In the second part of the study, I describe a method to express the anion-selective channelrhodopsin GtACR1 in individual of the five neurons of the lch5. For this I used the MARCM approach which
generates genetic mosaics during the development of the neurons of interest. Thereby a specific subset of cells deriving from a common precursor expresses the desired protein GtACR1.
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Structure-function Analysis Of The Drosophila Stubble Type Ii Transmembrane Serine ProteaseMorgan, Rachel 01 January 2008 (has links)
Hormonally-triggered regulatory hierarchies play a major role in organismal development. Disruption of a single member of such a hierarchy can lead to irregular development and disease. Therefore, knowledge of the members involved and the mechanisms controlling signaling through such pathways is of great importance in understanding how resulting developmental defects occur. Type II transmembrane serine proteases (TTSPs) make up a family of cell surface-associated proteases that play important roles in the development and homeostasis of a number of mammalian tissues. Aberrant expression of TTSPs is linked to several human disorders, including deafness, heart and respiratory disease and cancer. However, the mechanism by which these proteases function remains unknown. The ecdysone-responsive Stubble TTSP of Drosophila serves as a good model in which to study the functional mechanism of the TTSP family. The Stubble protease interacts with the intracellular Rho1 (RhoA) pathway to control epithelial development in imaginal discs. The Rho1 signaling pathway regulates cellular behavior via control of gene expression and actin cytoskeletal dynamics. However, the mechanism by which the Stubble protease interacts with the Rho1 pathway to control epithelial development, in particular leg imaginal disc morphogenesis, has yet to be elucidated. The Stubble protein consists of several conserved domains. One approach to a better understanding of the mechanism of action of Stubble in regulating Rho1 signaling is to define which of the conserved domains within the protease are required for proper function. Sequence analysis of twelve recessive Stubble mutant alleles has revealed that the proteolytic domain is essential for proper function. Alleles containing mutations which disrupt regions of the protease domain necessary for protease activation or substrate binding, as well as those with deletions or truncations that remove some portion of the proteolytic domain, result in defective epithelial development in vivo. In contrast, mutations in other regions of the Stubble protein, including the disulfide-knotted and cytoplasmic domains, were not observed. Another important step for defining the connection between Stubble and Rho1 signaling is to identify a Stubble target that acts as an upstream regulator of the Rho1 pathway. We performed a genetic screen in which 97 of the 147 Drosophila non-olfactory and non-gustatory G-protein-coupled receptors (GPCRs), a family of proteins that has been shown to be protease-activated and to activate Rho1 signaling, were tested for interactions with a mutant allele of Stubble. We found 4 genomic regions uncovering a total of 7 GPCRs that interact genetically when in heterozygous combination with a Stubble mutant. Further analysis of these genes is necessary to determine if any of these GPCRs is targeted by Stubble during activation of the Rho1 pathway.
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Affinity Proteomics Identifies Interaction Partners and Defines Novel Insights into the Function of the Adhesion GPCR VLGR1/ADGRV1Knapp, Barbara, Roedig, Jens, Roedig, Heiko, Krzysko, Jacek, Horn, Nicola, Güler, Baran E., Kusuluri, Deva Krupakar, Yildirim, Adem, Boldt, Karsten, Ueffing, Marius, Liebscher, Ines, Wolfrum, Uwe 22 September 2023 (has links)
The very large G-protein-coupled receptor 1 (VLGR1/ADGRV1) is the largest member
of the adhesion G-protein-coupled receptor (ADGR) family. Mutations in VLGR1/ADGRV1 cause
human Usher syndrome (USH), a form of hereditary deaf-blindness, and have been additionally
linked to epilepsy. In the absence of tangible knowledge of the molecular function and signaling
of VLGR1, the pathomechanisms underlying the development of these diseases are still unknown.
Our study aimed to identify novel, previously unknown protein networks associated with VLGR1
in order to describe new functional cellular modules of this receptor. Using affinity proteomics, we
have identified numerous new potential binding partners and ligands of VLGR1. Tandem affinity
purification hits were functionally grouped based on their Gene Ontology terms and associated with
functional cellular modules indicative of functions of VLGR1 in transcriptional regulation, splicing,
cell cycle regulation, ciliogenesis, cell adhesion, neuronal development, and retinal maintenance. In
addition, we validated the identified protein interactions and pathways in vitro and in situ. Our
data provided new insights into possible functions of VLGR1, related to the development of USH
and epilepsy, and also suggest a possible role in the development of other neuronal diseases such as
Alzheimer’s disease.
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Molecular regulation of G protein localization and its pharmacological implicationsTennakoon, Mithila Indracharuni 11 July 2022 (has links)
No description available.
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C-Reactive Protein (CRP) Blocks the Desensitization of Agonistic Stimulated G Protein Coupled Receptors (GPCRs) in Neonatal Rat CardiomyocytesWallukat, Gerd, Mattecka, Stephan, Wenzel, Katrin, Schrödl, Wieland, Vogt, Birgit, Brunner, Patrizia, Sheriff, Ahmed, Kunze, Rudolf 02 June 2023 (has links)
Recently, C-reactive protein (CRP) was shown to affect intracellular calcium signaling and blood pressure in vitro and in vivo, respectively. The aim of the present study was to further investigate if a direct effect on G-protein coupled receptor (GPCR) signaling by CRP can be observed by using CRP in combination with different GPCR agonists on spontaneously beating cultured neonatal rat cardiomyocytes. All used agonists (isoprenaline, clenbuterol, phenylephrine, angiotensin II and endothelin 1) affected the beat rate of cardiomyocytes significantly and after washing them out and re-stimulation the cells developed a pronounced desensitization of the corresponding receptors. CRP did not affect the basal beating-rate nor the initial increase/decrease in beat-rate triggered by different agonists. However, CRP co-incubated cells did not exhibit desensitization of the respective GPCRs after the stimulation with the different agonists. This lack of desensitization was independent of the GPCR type, but it was dependent on the CRP concentration. Therefore, CRP interferes with the desensitization of GPCRs and has to be considered as a novel regulator of adrenergic, angiotensin-1 and endothelin receptors.
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Identifying effects of adrenaline and dopamine binding on the beta2-adrenergic receptor structure and function using machine learningGunnarsson, Joar, Bergner, Leon January 2023 (has links)
The beta2-adrenergic receptor is a G-protein coupled receptor, involved in several physiological processes, which enables signaling through the cell membrane. To study the effect of dopamine and adrenaline binding on the receptor structure and function, we used machine learning methods applied to data from molecular dynamics simulations. We found that the three machine learning methods Random Forest, Kullback-Leibler divergence, and Principal Component Analysis generated results that correspond to previous studies. When comparing the active state of the receptor with or without a ligand bound, we found that residues around Ser203 and Asn301 of the orthosteric binding pocket and residues around Ala91 of the TM2 differed. When instead comparing the active state of the receptor with adrenaline or dopamine bound, we found that residues around Thr68 differed. Additionally, we also found that adrenaline and dopamine cause different structural changes in the intracellular parts of TM5 and TM6. These findings indicate ligand-specific effects on the receptor, providing potentially useful information for the understanding of the interaction of adrenaline and dopamine with the beta2-adrenergic receptor.
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The Evolutionary History of Vertebrate Adhesion GPCRs and Its Implication on Their ClassificationWittlake, Aline, Prömel, Simone, Schöneberg, Torsten 23 January 2024 (has links)
Adhesion G protein-coupled receptors (aGPCRs) form a structurally separate class of
GPCRs with an unresolved evolutionary history and classification. Based on phylogenetic relations
of human aGPCRs, nine families (A–G, L, V) were distinguished. Taking advantage of available
genome data, we determined the aGPCR repertoires in all vertebrate classes. Although most aGPCR
families show a high numerical stability in vertebrate genomes, the full repertoire of family E, F,
and G members appeared only after the fish–tetrapod split. We did not find any evidence for new
aGPCR families in vertebrates which are not present in the human genome. Based on ortholog
sequence alignments, selection analysis clearly indicated two types of tetrapod aGPCRs: (i) aGPCR
under strong purifying selection in tetrapod evolution (families A, B, D, L, V); and (ii) aGPCR with
signatures of positive selection in some tetrapod linages (families C, E, G, F). The alignments of
aGPCRs also allowed for a revised definition of reference positions within the seven-transmembranehelix
domain (relative position numbering scheme). Based on our phylogenetic cluster analysis, we
suggest a revised nomenclature of aGPCRs including their transcript variants. Herein, the former
families E and L are combined to one family (L) and GPR128/ADGRG7 forms a separate family (E).
Furthermore, our analyses provide valuable information about the (patho)physiological relevance of
individual aGPCR members.
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AmOct2R: Functional Characterization of a Honeybee Octopamine Receptor Inhibiting Adenylyl Cyclase ActivityBlenau, Wolfgang, Wilms, Joana Alessandra, Balfanz, Sabine, Baumann, Arnd 24 January 2024 (has links)
The catecholamines norepinephrine and epinephrine are important regulators of
vertebrate physiology. Insects such as honeybees do not synthesize these neuroactive substances.
Instead, they use the phenolamines tyramine and octopamine for similar physiological functions.
These biogenic amines activate specific members of the large protein family of G protein-coupled
receptors (GPCRs). Based on molecular and pharmacological data, insect octopamine receptors
were classified as either - or -adrenergic-like octopamine receptors. Currently, one - and four
-receptors have been molecularly and pharmacologically characterized in the honeybee. Recently,
an 2-adrenergic-like octopamine receptor was identified in Drosophila melanogaster (DmOct2R).
This receptor is activated by octopamine and other biogenic amines and causes a decrease in
intracellular cAMP ([cAMP]i). Here, we show that the orthologous receptor of the honeybee
(AmOct2R), phylogenetically groups in a clade closely related to human 2-adrenergic receptors.
When heterologously expressed in an eukaryotic cell line, AmOct2R causes a decrease in [cAMP]i.
The receptor displays a pronounced preference for octopamine over tyramine. In contrast to
DmOct2R, the honeybee receptor is not activated by serotonin. Its activity can be blocked eciently
by 5-carboxamidotryptamine and phentolamine. The functional characterization of AmOct2R now
adds a sixth member to this subfamily of monoaminergic receptors in the honeybee and is an important
step towards understanding the actions of octopamine in honeybee behavior and physiology.
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Evolutionary analyses reveal immune cell receptor GPR84 as a conserved receptor for bacteria-derived moleculesSchulze, Amadeus Samuel 16 January 2024 (has links)
The G protein-coupled receptor 84 (GPR84) is found in immune cells and its expression is increased under inflammatory conditions. Activation of GPR84 by medium-chain fatty acids results in pro-inflammatory responses. Here, we screened available vertebrate genome data and found that GPR84 is present in vertebrates for more than 500 million years but absent in birds and a pseudogene in bats. Cloning and functional characterization of several mammalian GPR84 orthologs in combination with evolutionary and model-based structural analyses revealed evidence for positive selection of bear GPR84 orthologs. Naturally occurring human GPR84 variants are most frequent in Asian populations causing a loss of function. Further, we identified cis- and trans-2-decenoic acid, both known to mediate bacterial communication, as evolutionary highly conserved ligands. Our integrated set of approaches contributes to a comprehensive understanding of GPR84 in terms of evolutionary and structural aspects, highlighting GPR84 as a conserved immune cell receptor for bacteria-derived molecules.:1. ABBREVIATIONS (3)
2. INTRODUCTION (4)
2.1 Structure and signal transduction of G protein-coupled receptors (4)
2.2 The evolution of the GPCR protein superfamily (5)
2.3 GPR84, a receptor regulating immune functions (6)
2.4 Aim of the study (10)
3. PUBLICATION (11)
4. SUMMARY OF THE THESIS (37)
5. REFERENCES (40)
6. ANLAGEN (45)
6.1 Supplemental information (45)
6.2 Erklärung über die eigenständige Abfassung der Arbeit (58)
6.3 Darstellung des eigenen Beitrags (59)
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Synthesis and Characterisation of Dual CCR7/CXCR4 AntagonistsIzidro, Mario C. January 2019 (has links)
Metastasis is a major cause of death in cancer patients but currently there are no
drugs available for its treatment. Hence there is an urgent clinical need for
identifying and developing anti-metastatic drugs. The activation of CC chemokine
receptor 7 (CCR7) and C-X-C chemokine receptor type 4 (CXCR4) plays an
important role in lymph node metastasis in a variety of cancers. Indeed, in
patients with tumours which are positive for CCR7 and/or CXCR4 expression,
prognosis and survival are poorer than those whose tumours are negative for
these receptors. CCR7 and/or CXCR4 activation, in addition to being involved in
inducing invasive phenotypes in cancer cells, promotes tumour cell growth and
survival. Our group has previously identified a series of sulfonamides as CCR7
antagonists. This project aims to extend on those studies and to develop a dual
CCR7 and CXCR4 antagonist to reduce metastasis in cancer.
Novel potent biaryl sulfonamide CCR7 antagonists were synthesised and
assessed by calcium flux assay. Several potential dual CCR7 and CXCR4 biaryl
sulfonamide antagonists have been synthesised, these are hybrid compounds
incorporating features from CCR7 antagonists of this project, and from known
sulfonamide CXCR4 antagonists. The most potent of such compound was able
to inhibit CCR7 activation in calcium flux assay (95% inhibition at 1 µM), however,
the relative potency of these compounds as CXCR4 antagonists was low. Molecular docking was used to investigate the binding mode of the synthesised
compounds in CCR7 and CXCR4. The generated docking poses were able to
rationalise some of the calcium flux assay results.
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