This thesis documents the subcellular localization and protein-protein interactions of two methyl recycling enzymes. These two enzymes, adenosine kinase (ADK) and S-adenosyl-L-homocysteine hydrolase (SAHH), are essential to sustain the hundreds of S-adenosyl-L-methionine (SAM)-dependent transmethylation reactions in plants. Both ADK and SAHH are involved in the removal of a competitive inhibitor of methyltransferases (MTs), S-adenosyl-L-homocysteine (SAH), that is generated as a by-product of the each transfer of a methyl group from SAM to a substrate. This research focused on understanding how SAH is metabolized in distinct cellular compartments to maintain MT activities required for plant growth and development. Localization studies using green fluorescent protein (GFP) fusions revealed that both ADK and SAHH localize to the cytoplasm and the nucleus, and possibly to the chloroplast, despite the fact that the primary amino acid sequence of neither protein contains detectable targeting signals. This suggested the possibility that these methyl-recycling enzymes may be targeted by specific protein-protein interactions. Moreover, deletion analysis of SAHH1 indicated that the insertion region (IR) of 41 amino acids (Gly150-Lys190), which is present only in plants and parasitic protozoan SAHHs among eukaryotes, is essential for nuclear targeting. This result suggested that the surface-exposed IR loop may serve as a binding domain for interactions with other proteins that may direct SAHH to the nucleus. To investigate protein-protein interactions, several methods were performed including co-immunoprecipitation, bimolecular fluorescence complementation, and pull-down assays. These results not only revealed that ADK and SAHH possibly interact through the IR loop of SAHH in planta, but also suggested that this interaction is either dynamic or indirect, requiring a cofactor/another protein(s) or post-translational modifications. Moreover, possible interactions of both ADK and SAHH with a putative Arabidopsis mRNA cap methyltransferase (CMT), which is localized predominantly in the nucleus, were also confirmed. These results support the hypothesis that the nuclear targeting of both SAHH and ADK can be mediated by the interaction with CMT. In addition, purification of Strep-tagged SAHH1 expressed in Arabidopsis identified a novel interaction between SAHH and aspartate-semialdehyde dehydrogenase (ASDH), an enzyme that catalyzes the second step of the aspartate-derived amino acid biosynthesis pathway. Analysis of ASDH-GFP fusions revealed that ASDH localizes to the chloroplast and the stromule-like structure that emanates from chloroplasts. Moreover the mutation in three amino acids (Pro164-Asp165-Pro166) located within the IR loop of SAHH disrupted its binding to ASDH which affected the plastid localization of SAHH, suggesting that the interaction between SAHH and ASDH is required for plastid-targeting of SAHH. Taken together, this thesis demonstrated that the localization of ADK and SAHH in or between compartments is possibly mediated by specific protein interactions, and that the surface-exposed IR loop of SAHH is crucial for these interactions.

MosA is a protein found in <i>Sinorhizobium meliloti</i> L5-30 and has been suggested to be responsible for the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine (3-MSI) from scyllo-inosamine (SI). However, we have shown MosA is a dihydrodipicolinate synthase (DHDPS) catalyzing the condensation of pyruvate with aspartate-β-semialdehyde (ASA). Since the DHDPS reaction occurs through a Schiff base aldol-type mechanism it was proposed that MosA could be an O-methyltransferase utilizing 2-oxo-butyrate (2-OB) as a novel methyl donor. This interesting yet unlikely possibility would explain MosA's role in the biosynthesis of 3-MSI without ignoring its similarity to DHDPS. Alternatively, MosA may have two catalytic domains one of which possesses a novel binding motif for S-Adenosyl methionine (SAM) to account for methyltransfer activity. In vitro demonstration of MosAs methyltransferase activity is required to resolve this apparent contradiction.<p>This dissertation describes the chemical synthesis of the rhizopines, investigation into whether MosA has a direct role in rhizopine biosynthesis and the thermodynamic characterization of compounds interacting with MosA as observed by isothermal titration calorimetry. <p>Initial investigation into MosAs methyltransferase activity began with 2-OBs interaction with the enzyme. Inhibition experiments determined 2-OB is a competitive inhibitor with respect to pyruvate of the DHDPS reaction of MosA. Furthermore, protein mass spectrometry of MosA in the presence of 2-OB and sodium borohydride indicated that a Schiff base enzyme intermediate was indeed being formed providing evidence that the proposed mechanism may exist. However, neither of the rhizopines had any effect on the DHDPS activity and HPLC assays determined that no 3-MSI was being produced by MosA in the presence of SI and 2-OB. Furthermore, HPLC assays failed to detect methyl transfer activity by MosA utilizing the SAM as a methyl donor. <p>Isothermal titration calorimetry provided thermodynamic characterization of the pyruvate and 2-OB Schiff base intermediates formed with MosA. In addition, ITC provided insight into the nature and thermodynamics of (S)-lysines inhibition of MosA. ITC failed to detect any interactions between the rhizopines or SAM with MosA. These results indicate that MosA is only a DHDPS and does not catalyze the formation of 3-MSI from SI as hypothesized in the literature.

Mesoporous silica materials containing microporous cavities provided by covalently bound ¦Â-cyclodextrin (CD ICS) were synthesized by co-condensation of a ¦Â-CD functionalized triethoxy silane (CD ICL) with tetraethyl orthosilicate (TEOS) by using neutral amine surfactants as structure directing agents (SDA). CD ICL was prepared by reacting ¦Â-CD with 3-isocyanatopropyltriethoxysilane. IR spectroscopy of CD ICL showed complete disappearance of isocyanato group at 2270 cm-1. 1H NMR results indicate an average of four isocyanate linkers covalently attached to random hydroxyl substituents of each molecule of ¦Â-CD. <p> Nine different CD ICS materials were synthesized using dodecylamine, tetradecylamine or hexadecylamine with ¦Â-CD (2, 4, and 6 mol %) with respect to TEOS. The incorporation of ¦Â-CD within the mesoporous framework was supported by IR, Raman, MALDI TOF MS, solid state 13C NMR CP-MAS and TGA results. Small angle X-ray diffraction results showed a peak at 2¦È ¡Ö 2.20, supporting the presence of an ordered silica mesostructure framework. For materials with same CD loading, the surface area and pore volume doubled as the surfactant from dodecylamine to hexadecylamine. However, as the CD loading increased from 2% to 6%, the surface area decreases by a factor of ~ 1.5. <p>MALDI TOF mass spectrometry showed two peaks at m/z 1157 a.m.u. and 1173 a.m.u. for [¦Â-CD + Na]+ and [¦Â-CD + K]+ respectively due to desorption of ¦Â-CD from the walls of the silica matrix. The 13C NMR CP MAS results showed 13C signals in the region ¦Ä=60-110 ppm due to the nuclei of ¦Â-CD. CD ICS materials were found to be effective as a sorbent in both gas and aqueous phases, respectively. The sorption capacity (mmol/g) of p-nitrophenol increased from 61% to 84% with an increase of CD loading from 2% to 6% and as the alkyl chain length of the SDA increases from dodecylamine to hexadecylamine. The adsorption isotherm of CH3Cl in the gas phase and that of p-nitrophenol in the aqueous phase at ambient temperature adopts a multilayer model of adsorption.

Recent research has shown that the Arctic may be a sink for mercury, however, the fate of this deposited mercury in the environment is not known. The objective of this project was to determine the factors affecting methyl mercury (MeHg) production in Arctic organic soil on the Truelove Lowlands, Devon Island, Canada. In the field we observed a steady decrease in MeHg over time, with MeHg concentration at many sampling locations declining below detection limits. This decrease did not correlate to any chemical or biophysical parameter measured. During the study the Lowlands appeared to be mildly reducing with dissolved Fe(II) being present in the porewater, however, no correlation was observed between MeHg production and the variables measured. The dissolved organic matter concentration of the porewater was quite high, the pH was circumneutral and it would seem that in the absence of more highly reducing conditions that mercury would be unavailable for methylation.<p> It seems likely under field conditions MeHg was much more bioavailable then inorganic mercury. This would lead to a higher rate of demethylation then methylation and a net decrease in MeHg. Little research has been done on demethylation and the effect of environmental conditions on demethylation, especially in arctic environments. However, it is possible that the rate of demethylation was not affected by changes in temperature or any other parameter measured over the course of the field study. <p> Laboratory microcosm studies using saturated soil from the organic horizons demonstrated little potential for unspiked organic soil to produce significant amounts of MeHg. The spiked treatment, however, had an eight fold increase in MeHg concentration and the sterile treatment showed no change in MeHg concentration over 40 days of freeze (-5 0C) and 59 days of thaw (4 oC). <p> Our data suggests that a combination of atmospheric and in-situ processes maintain a cycle of MeHg production (spring) and loss (summer) in arctic soils. It would seem that Arctic wetland soils are not a significant source of MeHg to the Arctic ecosystem and that snowmelt is the dominant source.

Three series copolyesters [poly(butylene succinate-co-propylene succinate) (PBPSu), poly(butylene succinate-co-2-methyl-1,3-propylene succinate) (PBMPSu) and poly(ethylene succinate-co-butylene succinate) (PEBSu)] and their homopolyesters [poly(butylene succinate) (PBSu), poly(ethylene succinate) (PESu), poly(propylene succinate) (PPSu) and poly(2-methyl-1,3-propylene succinate) (PMPSu)] were synthesized by a two-step reaction (esterification and polycondensation) with titanium tetraisopropoxide as the catalyst. Molecular weights of all synthesized polyesters were determined by intrinsic viscosity and gel permeation chromatography (GPC) measurements. The values of intrinsic viscosity (0.97 ~ 1.62 dL/g) and relative molecular weight (2.4x10000 ~ 11.9x10000 g/mol) indicate that these polyesters can be made into films without complications. Compositions and sequence distributions of copolyesters were determined by analyzing the spectra of 1H NMR and 13C NMR. The randomness values of these copolyesters are closed to 1.0 that represents random sequence distribution of the comonomers. Thermal properties and stabilities were characterized using differential scanning calorimeter (DSC) and thermogravimetric analyzer (TGA), respectively. All copolyesters exhibited a single glass transition temperature (Tg). For PBPSu copolyesters, incorporating propylene succinate units to PBSu not only narrows the window between Tg and melting temperature (Tm), but also retards the cold crystallization ability, thereby lowering the crystallinity to a considerable extent. This phenomenon also occurred in PBMPSu and PEBSu copolyesters when the 2-methyl-1,3-propylene succinate (MPS) and butylene succinate (BS) units were incorporated into PBSu and PESu, respectively. Tstart is the temperature of first detectable deviation from the derivative curve of weight loss. Tstarts of all synthesized polyesters around 240 £jC, higher than the temperature of polycondensation reaction (220 £jC), demonstrates that there is no necessity of using a thermal stabilizer during the synthesis of these polyesters. Additionally, the thermal stability does not vary significantly with compositions in the same series polyester. Wide-angle X-ray diffractograms (WAXDs) at room temperature were obtained from polyesters crystallized isothermally at a temperature around 5-20 £jC below their melting temperatures. WAXD patterns of two series polyesters elucidated that the incorporation of PS or MPS units into PBSu markedly inhibits the crystallization behavior of PBSu. The phenomenon also occurred in PEBSu copolyesters when BS units were incorporated into PESu. Results of WAXD and DSC measurements showed that PMPSu is a amorphous polyester. The retarding effect on crystallization by methyl substituents on the polymer chain is efficient.

The objective of this research was to investigate the retention of arsenate (iAsV), arsenite (iAsIII), monomethyl arsenate (MMAsV) and dimethyl arsenate (DMAsV) by calcite and assess the impact of dissolved Ca2+, Mg2+, phosphate and sulfate on arsenic solubility, adsorption and precipitation phenomena. Adsorption kinetics of iAsV, evaluated at a low and high concentration, was a relatively rapid process, with a fast initial reaction rate within the first few minutes and a subsequent slower reaction rate as equilibrium was approached. The relative adsorption of arsenicals decreased in the following order: iAsV > iAsIII > DMAV > MMAV. In no case was a clear adsorption maximum observed with increasing dissolved arsenic concentration. Dissolved 0.01 M Ca2+ resulted in an increase in iAsV adsorption; however, in the presence of 0.1 M Ca2+ adsorption of iAsV was decreased. The presence of Mg2+ as 0.01 M Mg(NO3)2 resulted in decreased iAsV adsorption probably the result of a lower iAsV affinity for adsorbed Mg2+ as compared to Ca2+. Phosphate and sulfate were highly competitive with iAsV in adsorption to calcite and both resulted in decreased iAsV adsorption. The total prevention of iAsV adsorption at initial equimolar arsenic/phosphate concentrations > 88 µM each could be from the consumption of available calcite surface sites by the specific adsorption of phosphate. Equilibrium modeling, using the geochemical and mineral speciation of equilibrium model (MINTEQA2), indicated that at low concentrations of arsenate or phosphate solid-phase precipitation was not likely and adsorption processes likely controlled solubility. At high concentrations of arsenate Ca3(AsO4)2 · 3 2/3 H2O and Ca3(AsO4)2 · 4 1/4 H2O solid phases could be controlling arsenate solubility. This study indicates that arsenic adsorption response by calcite was different than that of phosphate suggesting that arsenic may not be specifically adsorbed to calcium at the calcite surface. Reduction and biomethylation of arsenic decreased adsorption, suggesting that processes which could affect the speciation of arsenic in the environment, could increase arsenic mobility in environmental systems where calcite and dissolved aqueous calcium play a predominant role in controlling arsenic solubility. Dissolved aqueous concentrations of magnesium, phosphate and sulfate generally reduced the ability of arsenic to be adsorbed to calcite.

Silver (Ag) was loaded to three different kinds (P-25, NT-22, and TiO(OH)2) of titanium dioxide (TiO2) powders through adding three different quantities (4.6, 9.2, and 13.8 ml) of silver nitrate (AgNO3) solution by mechanical ball milling process. X-Ray diffraction analysis suggested that Ag was loaded on the TiO2 powders in the form of silver oxide (AgO). SEM, particle size, and BET surface area analyses revealed that TiO2 particles agglomerated after ball milling, resulting in the decrease of specific surface area of the TiO2 powders. Powders P-25, NT-22, and TiO(OH)2 degraded 94 %, 46 %, and 26 %, respectively of MO solution under 1 h UV irradiation. Increasing amount of Ag loading enhanced photocatalytic activity of TiO2 powders under UV irradiation. The best photocatalytic performance was achieved by 13.8 ml AgNO3 solution added NT-22 powders. Percent methyl orange (MO) degradation of 13.8 ml AgNO3 solution added P-25, NT-22, and TiO(OH)2 powders under 1 h UV irradiation was 85 %, 96 %, and 67 %, respectively. Contact angle measurements revealed that hydrophilic properties of TiO2 powders were also improved by Ag loading. Moreover, TiO2 powders gained antibacterial prospect after Ag addition. Ag loaded TiO2 powders could be used effectively for the applications requiring better photocatalytic activity and antibacterial effect.

The photocatalytic activity of semiconductor metal oxides can be improved by the addition of sensitizer which enhances the band gap by considerable red shift of the absorption edge of semiconductor. In the present study, the effect of ascorbic acid as sensitizer on the photocatalytic activity of titania-silica binary mixtures was studied. The SiO2-TiO2 mixtures having 50wt%Ti:Si composition were prepared with sol-gel method. The surface area and porosity of the samples were modified by using various amounts of polyethylene glycol (PEG) as template. The thin films of the samples were obtained by dip coating of glass plates to colloidal solutions. The samples were characterized by methylene blue adsorption method and UV-Vis spectrophotometry. The photocatalytic activities of the samples were measured with methylene blue degradation, methyl orange degradation and direct water splitting in the presence and absence of ascorbic acid. Increase in the surface area and reaction rate with increasing PEG addition until a threshold value was observed. Highest methylene blue degradation activity was observed for 27g PEG added sol-gel derived film and surface area of this film is measured as 44m2/m2. Ascorbic acid presence shows a significant increase in the photocatalytic degradation activity of methyl orange. The sensitization effect of ascorbic acid was also compared with the effect of EDTA. It was found that the effect of ascorbic acid on the methyl orange degradation rate is significantly higher than the effect of EDTA. However, the effect of EDTA is more pronounced in water splitting reaction.

Performance studies on the treatment of VOCs in air streams by a pilot-scale regenerative catalytic oxidizer (RCO) and a full-scale regenerative thermal oxidizer (RTO) were conducted. The pilot-scale RCO was constructed with two 20-cm x 200-cm (inside diameter x packing height) regenerative beds packed with gravel (average particle size = 1.25 cm) used as the thermal regenerative solid material. Experimental results indicate that destruction efficiencies of 97 and 90%, respectively, were obtained for methyl ethyl ketone and toluene at a superficial gas velocity of 0.372 m/s (evaluated at 25¢J) and a maximum bed temperature of 400¢J. It was estimated that an electrical thermal energy of approximately 84 kWh was required for treating 1,000 m3 of the waste air stream by the RCO. The full-scale RTO was constructed with two regenerative beds of 100-cm square x 200-cm height packed with the gravel used in the RCO. A paint solvent containing methyl ethyl ketone, ethyl benzene, xylenes, and ethyl acetate was used for the target VOCs. Experimental results indicate that, at a superficial gas velocity of 0.372 m/s (evaluated at 25¢J), VOC destruction efficiencies of 84, 92, 95 and 98% were obtained for the beds at temperature ranges of 200-300, 300-500, 400-700, and 500-700¢J. These conditions corresponded to empty gas retention times of 1.07, 0.85, 0.41, and 0.39s, respectively, for the cited temperature ranges. Finally, it was estimated that electrical watts of approximately 0.10, 0.45, 1.78, 2.43 kWh were required for treating 1,000 m3 of the waste air stream, respectively, at bed temperature ranges of 200-300, 300-500, 400-700, and 500-700¢J.

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