Um grande crescimento no interesse por microdispositivos eletroforéticos tem sido observado nos últimos anos. Vantagens atrativas como baixo consumo de reagentes e diminutos tempos de analise são verificados. Microdispositivos fabricados usando toner de impressora e folhas de transparência (poliéster) vem a somar valores como baixo custo e simplicidade de confecção à técnica de micro-separação eletroforética. Entretanto, a aplicação analítica utilizando esse tipo de microdispositivo tem sido pouco explorada. <br />Neste trabalho o uso de microchips eletroforéticos fabricados em poliéster-toner (PT) é utilizado para a determinação simultânea do herbicida glifosato e seu maior metabólito, AMPA (ácido aminometilfosfônico). Em um primeiro momento, o trabalho apresenta o desenvolvimento de uma metodologia no qual utiliza condutometria sem contato (C4D) como sistema de detecção, aliada à separação eletroforética em microchips de PT. Vários parâmetros que regem uma boa confiabilidade analítica, tanto quanto otimizam a sensibilidade do sistema foram avaliados. <br />Em um segundo momento, ainda aliada à microchips de PT, a técnica de cronoamperometria foi utilizada como sistema de detecção. Nessa etapa do projeto estudos eletroquímicos foram inicialmente realizados em eletrodos convencionais de ouro e cobre, buscando averiguar qual metal apresenta maior sensibilidade para o herbicida glifosato. Tendo o metal cobre como melhor escolha, eletrodos planares foram construídos a partir da combinação das tecnologias da produção de máscaras de toner, e placas de circuito impresso como fonte de cobre. <br />Em ambas as metodologias desenvolvidas, picos bem resolvidos foram encontrados para os analitos em estudo. Tempos menores que 80 s foram gastos entre o processo de separação e detecção; uma boa repetibilidade também foi encontrada. Os valores de limite de detecção (LD) utilizando C4D foram 60,8 e 74,8 &micro;mol L-1 para glifosato e AMPA respectivamente. Como esperado, menores valores de LD foram obtidos na detecção amperométrica, com 1,88 &micro;mol L-1 para glifosato e 16,45 &micro;mol L-1 para AMPA. A aplicabilidade dos métodos foi verificada através da analise do herbicida e seu metabólito em amostras de água. Etapas de derivatização e pré-concentração off-line não foram usadas nesse trabalho, dessa forma os dois métodos desenvolvidos apresentaram como principais vantagens o extremo baixo custo, e a simplicidade de uso. / A large increase in interest in electrophoretic microdevices has been observed in recent years. Advantages attractive as low reagent consumption and low analytical time are checked. Microdevices fabricated using printer toner and polyester transparency sheets are the sum values as low cost and simplicity of the technique of making micro-electrophoretic separation. However, the analytical application using this type of microdevice has been little explored. <br />In this work the use of microchip electrophoresis fabricated on polyester-toner (PT) is used for the simultaneous determination of the herbicide glyphosate and its major metabolite, AMPA (aminomethylphosphonic acid). In a first moment, the work presents the development of a methodology in which the use capacitively coupled contactless conductivity detection (C4D) for determination of analytes is employed, coupled with electrophoretic separation in PT microchips. Several parameters that govern a good analytical reliability and with the intuit of optimizing the sensitivity of the system were evaluated. <br />In a second time and still allied to the PT microchips, the technique of chronoamperometry was used for detection. Electrochemical studies were initially conducted in conventional electrodes of gold and copper, looking for determine which metal is more sensitive to detect the herbicide glyphosate. Having the best choice planar copper electrodes were constructed from a combination of technologies for the production of toner masks, and printed circuit boards. <br />In both, C4D and chronoamperometric detection methodologies, well-resolved peaks were found for the glyphosate and AMPA. Time analysis of less than 80s were found including the separation and detection processes, and a good analytical repeatability was also found. The limits of detection (LOD) using C4D were 60,8 and 74,8 &micro;mol L-1 respectively for glyphosate and AMPA. As expected, lower LOD were obtained in the amperometric detection methodology, 1.9 &micro;mol L-1 for glyphosate, and 16.5 &micro;mol L-1 for AMPA. The applicability of the methods was tested by analyzing the herbicide and its metabolite in fortified water samples. Steps of derivatization and preconcentration off-line were not applied in this work, so the two methods showed as main advantages very low cost and time analysis, and simplicity of application.

My dissertation work integrates the techniques of microfabrication, micro/nanofluidics, and bioanalytical chemistry to develop miniaturized devices for healthcare applications. Semiconductor processing techniques including photolithography, physical and chemical vapor deposition, and wet etching are used to build these devices in silicon and polymeric materials. On-chip micro-/nanochannels, pumps, and valves are used to manipulate the flow of fluid in these devices. Analytical techniques such as size-based filtration, solid-phase extraction (SPE), sample enrichment, on-chip labeling, microchip electrophoresis (µCE), and laser induced fluorescence (LIF) are utilized to analyze biomolecules. Such miniaturized devices offer the advantages of rapid analysis, low cost, and lab-on-a-chip scale integration that can potentially be used for point-of-care applications.The first project involves construction of sieving devices on a silicon substrate, which can separate sub-100-nm biostructures based on their size. Devices consist of an array of 200 parallel nanochannels with a height step in each channel, an injection reservoir, and a waste reservoir. Height steps are used to sieve the protein mixture based on size as the protein solution flows through channels via capillary action. Proteins smaller than the height step reach the end of the channels while larger proteins stop at the height step, resulting in separation. A process is optimized to fabricate 10-100 nm tall channels with improved reliability and shorter fabrication time. Furthermore, a protocol is developed to reduce the electrostatic interaction between proteins and channel walls, which allows the study of size-selective trapping of five proteins in this system. The effects of protein size and concentration on protein trapping behavior are evaluated. A model is also developed to predict the trapping behavior of different size proteins in these devices. Additionally, the influence of buffer ionic strength, which can change the effective cross-sectional area of nanochannels and trapping of proteins at height steps, is explored in nanochannels. The ionic strength inversely correlates with electric double layer thickness. Overall, this work lays a foundation for developing nanofluidic-based sieving systems with potential applications in lipoprotein fractionation, protein aggregate studies in biopharmaceuticals, and protein preconcentration. The second project focuses on designing and developing a microfluidic-based platform for preterm birth (PTB) diagnosis. PTB is a pregnancy complication that involves delivery before 37 weeks of gestation, and causes many newborn deaths and illnesses worldwide. Several serum PTB biomarkers have recently been identified, including three peptides and six proteins. To provide rapid analysis of these PTB biomarkers, an integrated SPE and µCE device is assembled that provides sample enrichment, on-chip labeling, and separation. The integrated device is a multi-layer structure consisting of polydimethylsiloxane valves with a peristaltic pump, and a porous polymer monolith in a thermoplastic layer. The valves and pump are fabricated using soft lithography to enable pressure-based sample actuation, as an alternative to electrokinetic operation. Porous monolithic columns are synthesized in the SPE unit using UV photopolymerization of a mixture consisting of monomer, cross-linker, photoinitiator, and various porogens. The hydrophobic surface and porous structure of the monolith allow both protein retention and easy flow. I have optimized the conditions for ferritin retention, on-chip labelling, elution, and µCE in a pressure-actuated device. Overall functionality of the integrated device in terms of pressure-controlled flow, protein retention/elution, and on-chip labelling and separation is demonstrated using a PTB biomarker (ferritin). Moreover, I have developed a µCE protocol to separate four PTB biomarkers, including three peptides and one protein. In the future, an immunoaffinity extraction unit will be integrated with SPE and µCE to enable rapid, on-chip analysis of PTB biomarkers. This integrated system can be used to analyze other disease biomarkers as well.

Interest in microfluidic platforms has surged as an alternative for sample preparation in the past two decades, with the potential for miniaturization, portability, automation, integration and parallelism driving this research. However, it is still very challenging to develop an integrated microfluidic device for proteomic preparation for mass spectrometry analysis. My thesis work is focused on the development of a valve-based microfluidic platform interfaced with electrospray ionization mass spectrometry for multiplexed proteomic analysis. First, techniques are developed for the fabrication and packing of multiple beds in a polydimethylsiloxane (PDMS) microdevice, which is compatible with the integration of multilayer microvalves. A soft lithography technique was used to fabricate stable weirs in microchips and new bead introduction techniques were explored for the elimination of bead introduction channels in the design. Such a combination provides a convenient, efficient and effective way for multiple bed preparation in a complex design. Next, detailed studies were carried out on the design parameters and performance of multilayer PDMS microvalves in the presence of high electric fields. These studies guided the integration of electrophoresis methods with valve-based fractionation. Finally, a coupled CE-fractionation-SPE-ESIMS peptide analysis on a totally integrated valve-based microchip is presented. We show the design and operation of a system that performs electrokinetic separation, followed by fractionation into multiple channels, SPE extraction and sample cleanup on packed reaction beds, using a multiplexed, hydraulically valved system, with subsequent mass spectral (MS) analysis. This coupled multiple channel CE-Fractionation-SPE-ESIMS platform on valve-based microchip was successfully applied to peptide analysis.

Development of a simple, specific, sensitive and rapid RNA microchip for detection of Head and Neck Cancer (HNC) mRNA, pathogenic bacteria and dengue virus (DENV) RNA is reported. By use of nucleases and polymerases specific RNAs are selectively labeled and detected without separation, reverse transcription and or polymerase chain reaction. This is accomplished by designing specific Hybrid probes consisting of DNA-2’-O-Me-RNA-DNA regions to target the RNA of interest. Upon hybridization with the target RNA, RNase H digestion is used to remove the 3’- RNA sequences which exposes the template for Klenow extension with reporter molecules such as hapten or fluorophore labels. This novel RNA microchip is fast (ca. 1 h detection time), selective as individual RNAs are detected in a synthetic mixture and total RNA mixtures, specific for single nucleotide polymorphisms (SNPs) discrimination and sensitive up to attomole level for chemiluminescence detection and lower femtomole for gold nanoparticles (AuNPs) and silver staining method. Using chemiluminescence, HNC biomarkers, VCAM1 and IL8 are specifically labeled and detected in the presence of thousands of other mRNAs in cancer cell lines and human colon cancer total RNA without interference. Furthermore, the method is highly specific as shown with DENV SNPs discrimination. Moreover, we report rapid (ca 1hour), selective, specific multi-marker detection of pathogenic mRNAs and HNC mRNAs using AuNPs-silver staining on the RNA microchip. Streptavidin gold nanoparticles technology has a potential in the analysis of specific mRNAs in a wide array of field including infectious diseases diagnosis, viral infections, food safety, gene expression profiling and cancer detection. A simple and rapid NaOH RNA extraction procedure was developed for E. coli total RNA extraction with specific results on the RNA microchip using both chemiluminescence and AuNPs silver staining. This extraction avoids the use of commercial RNA purification kits thus reducing the cost. Furthermore, visual detection on the RNA microchip is simple, does not require electricity or special equipment, and therefore is a good candidate for field diagnostics with minimum resources.

Although DNA microarray can detect multiple DNA samples simultaneously, current detection techniques involve PCR and other traditional procedures. In this study, a sensitive, specific and rapid detection method, which eliminates PCR and other lengthy processes, for pathogenic DNA is presented. This technology is based on the hybridization of target DNA to the immobilized probe, extension of probe DNAs using the target-DNA as a template and signal generation by streptavidin-horseradish peroxidase and substrate. This method is highly specific and sensitive, allowing single-nucleotide-base mismatches discrimination and the detection at femtomole level. The experiments are designed to achieve short hybridization time. Therefore, satisfactory signal can be detected within minutes, allowing the rapid detection of multiple pathogenic DNA. Most importantly, the E. coli genomic DNA can be detected using this technology. In conclusion, this detection method is useful for applications including on-site pathogenic disease detection, crime scene investigation, and pathogen inspection in the environment.

Verapamil is a commonly used medicine for the treatment of supraventricular arrhythmias, angina and hypertension. Recently, some newly developed applications of Verapamil, such as treating hypomania and chemotherapy for cancers, have been reported. Thus, monitoring the concentration of Verapamil accurately is very important. The major clinical analytical methods of Verapamil concentration determination are high performance liquid chromatography (HPLC) with UV or with fluorescence detector. However, these analytical methods have some disadvantages, like expensive instruments, complex operation, and time-consuming etc. The chemical structure and properties of Verapamil are very stable. The preliminary result of electrochemical analysis doesn¡¦t show any electrochemical activity. In this study, we developed an innovative ozone pre-treatment method to oxidize Verapamil to the smaller molecules and change its structure. Verapamil have excellent electrochemical activity after ozone pre-treatment. The spectroscopy and mass spectrometry show the changes of Verapamil structure. The products of Verapamil treated with ozone are also predicted by mass spectrometry. The gold nanoelectrode ensemble electrodes (GNEE) are used as working electrode for its good catalytic activity of electrochemical reaction, high sensitivity and high selectivity. The overall experimental framework of this study is microchip with GNEE working electrode accompanied by cyclic voltammetry, an electrochemical analytical instrument. Compared with traditional analytical methods, the system has some advantages such as small size, micro sample volume, easy operation, rapid detection and low cost. The limit concentration of Verapamil solution for stable detection in the system is 10 ng/mL. A linear dynamic range with a high correlation factor from 10 ng/mL to 100 £gg/mL was obtained. For the analysis of serum sample, Verapamil present excellent electrochemical activity at 1 ng/mL. A linear dynamic range with a high correlation factor from 1 ng/mL to 100 £gg/mLwas obtained. According to the results, our system for clinical Verapmil concentration analysis has the feasibility of the practical application.

This thesis reports design, fabrication, and implementation of two different micro electrophoresis system architectures for DNA analyses. The first architecture is traditional single channel layout with several design alternatives for size-based separation of DNA fragments. The second one is novel double channel architecture specialized for rapid mutation detection using heteroduplex analysis (HDA) method with an application of a newly designed injection technique. Besides achieving high resolution separations within the length of 1 mm with single channel arrangement, HDA was successfully applied for 590 base pair (bp) long PCR sample with 3 bp mutations in a separation length of 50 &micro / m in less than 3 minutes with double channel structure. Microchannels were formed using parylene-C due to its conformal deposition, no surface treatment requirement, transparency, biocompatibility, low background fluorescence, etc. Using the advantage of parylene in fabrication, the microchannels were fabricated with an only three-mask process. New double channel architecture is obtained by dividing the 200 &micro / m-wide separation channel into two parts by a 20 &micro / m-thick wall between them. For sample injection, various techniques, such as traditional cross, double-T, and double-L were investigated and optimized for single channel architecture assisting with pullback injection method. For double channel architecture, a novel, u-turn injection technique was applied. Precise control of sample amount by adjusting the injection time was accomplished by this new technique. Using high resolution cross-linked polyacrylamide gel as sieving material, separations were achieved in a very short length and time. Electrophoresis was performed in both channels of the double channel microchips simultaneously under the same conditions. This gives the chance of having a control channel in microchip format, which is very critical for the accuracy and reliability of the results in genetic analyses.

This paper have investigated the dual polarization oscillations (DPO) and associated dynamical behaviors in laser-diode-pumped microchip Nd:GdVO4 laser. Some optical properties of Nd:YAG, Nd:YVO4, and Nd:GdVO4 laser materials are compared. The higher thermal conductivity of Nd:YAG makes it suitable for higher-power applications. The larger stimulated-emission coefficient of Nd:YVO4 material makes it favorable for increasing light-light conversion efficiency. However, Nd:GdVO4 material has high thermal conductivity and large stimulated-emission coefficient. Many experiments done to study Nd:GdVO4 crystal¡¦s properties focused on the efficiency of high power generation. Orthogonal linearly-polarized emissions could be obtained in fluorescence spectrum of Nd:GdVO4, but DPO did not be observed in Nd:GdVO4 laser possessing a large fluorescence anisotropy with laser-diode pumping. In this paper, DPO on different transitions in laser-diode-pumped microchip Nd:GdVO4 are obtained for the first time. Furthermore, more effective generation of dual polarization oscillations is affected by the pumping conditions associated with different temperature gradient than different pumping power density. The results imply that DPO can be generated without having to use additional optical elements and Nd:GdVO4 material is suitable for the construction of compact DPO lasers. Laser properties including oscillation spectra, input-output characteristics, pump-dependent pattern formations and noise power spectra are studied experimentally. A poor mode matching between the pump beam and lasing beam results in the generation of high order transverse modes. The observed anti-phase dynamics have been explained in terms of the reduced three-dimensional cross-saturation of population inversions among orthogonally-polarized modes. The study of dynamics of microchip Nd:GdVO4 lasers under pump modulation has also been reported in this paper. Different phase correlations among laser modes are obtained by tuning the modulation frequency and amplitude. The observed dynamical states are reproduced theoretically by rate equations of multimode class-B lasers including the cross-saturation among individual modes and the pump modulation.

Capillary electrophoresis (CE) is an excellent analytical separation method with promising features such as small sample volumes (µL to pL), fast analysis times (s), high selectivity and efficiency, and excellent compatibility with biological samples. However, the inability of conventional CE detectors to sense biologically active compounds that are optically and electrochemically inactive limits their use for biosensing and drug screening. We have developed a highly stable electrophysiological detection platform consisting of ion channel (IC) reconstituted in synthetic bilayer membrane also known as black lipid membranes (BLM) suspended across a functionalized microaperture to be coupled to a high resolution capillary separation channel. Low energy surface modifiers were used to drastically improve the electrical, mechanical, and temporal stability of BLMs. Glass microapertures modified using tridecafluoro 1, 1, 2, 2-tetrahydrodimethylchlorosilane facilitated the rapid formation of highly stable BLMs due to the amphiphobic property (H₂O/oil repellency). Furthermore, a combination of chemically modified aperture surfaces and chemical cross-linking within the lipid membrane were used to dramatically improve BLM stability. Partial cross-linking within the bilayer maintained fluidity which allowed reconstitution of ion channel proteins while maintaining the stability of BLM-IC platform. The stable BLM-IC across glass pipette aperture was coupled to microchip electrophoresis and was shown to withstand field strength (>250 V/cm) from separation channel. Additionally, planar microapertures fabricated in SU8 were used for the formation of stable BLM-IC platform towards the construction of an integrated device. The chemical properties of the SU8 supported the formation and cross-linking within polymerizable lipid or lipid bilayer doped with polymerizable methacrylate monomers. Additionally, we expressed ion channel coupled receptor fusion protein in HEK 293 cells towards the development of ion channel sensors for wide range of ligand detection in BLM sensor platforms. The pharmacology of IC functionalized with muscarinic acetyl choline (M2-K) receptor using cell based assay by patch clamp electrophysiology showed activation by acetylcholine and inhibition by atropine. Thus this platform holds a great promise as the next-generation integrated analysis system for rapid screening of biologically active compounds (eg. glucagon) in complex matrix such as whole blood and urine for the diagnosis and management of chronic disease such as diabetes.

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