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Synthèse et applications de nouveaux complexes métallocéniques multidentes / Synthesis and applications of new multidentate metallocenic complexesAllouch, Fatima 29 January 2013 (has links)
Ce mémoire porte sur l’accès simple et peu coûteux à de nouveaux ligands ferrocéniques aminés et aminophosphinés et leur coordination avec des métaux de transition pour des applications en catalyse homogène.Des métallo-ligands aminés flexibles ont été obtenus et caractérisés après amination réductrice du 1,1’-diformylferrocène. D’autres ligands (N,N) rigides ont été isolés au départ du précurseur du 1,1’-di-tert-butyl-3,3’-diformylferrocène. Des aza-ferrocénophanes ont également été facilement préparés avec ces deux précurseurs carbonylés. Lors de la coordination de ces ligands avec le palladium, un palladacycle original a été isolé et caractérisé par diffraction de rayons X.Des ligands ferrocéniques (N,P) ont été obtenus par trois méthodes: i) ortholithiation de ligands ferrocéniques aminés suivie d’un ajout de chlorophosphine, ii) amination réductrice des ferrocènes formylés substitués ou non en présence d’amine portant une fonction phosphine, iii) substitution directe du ferrocène dilithié par des chlorophosphines comportant un hétérocycle azoté. Leur coordination avec du palladium et du platine a été étudiée. Ces métallo-ligands hybrides ont été impliqués dans des réactions de chlorures d’aryle avec des acides arylboroniques (couplage de Suzuki), ainsi que dans la réaction de Sonogashira avec le couplage de bromures et de chlorures d’aryle avec le phénylacétylène / This thesis focuses on simple and inexpensive access to new amino and aminophosphine ferrocenyl ligands and their coordination with transition metals for applications in homogeneous catalysis.Flexible amine metallo-ligands were obtained and characterized after reductive amination of 1,1'-diformylferrocene. Other rigid (N,N) ligands were isolated starting from the precursor 1,1'-di-tert-butyl-3, 3'-diformylferrocene. Aza-ferrocenophanes were also easily prepared with these two formyl precursors. During the coordination of these ligands with palladium, a stable and original palladacycle was isolated and characterized by DRX.(N,P) ferrocenyl ligands were obtained by three methods: i) ortholithiation of aminoferrocenyl ligands followed by addition of chlorophosphines, ii) reductive amination of substituted or not formylferrocene in the presence of amine bearing a phosphine function, iii) direct substitution of dilithiated ferrocene by chlorophosphines with a nitrogen-containing heterocycle. Their coordination with palladium and platinum has been studied. These hybrid metallo-ligands have been implicated in the reactions of aryl chlorides to arylboronic acids (Suzuki cross-coupling), as well as in the Sonogashira reaction involving of coupling aryl bromides and chlorides to phenylacetylene
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Earth-abundant metal complexes for catalyzed hydroelementation / Réactions d’hydroélémentation catalysées par des complexes des métaux de transition abondantsZheng, Jianxia 07 October 2014 (has links)
Ce travail de recherche est consacré au développement de catalyseurs à base de métaux de transition abondants de la première rangée du tableau périodique, tels que Mn, Fe, et Ni, pour les réactions d'hydro-élémentation. Tout d'abord, l'hydrosilylation de cétones et d'aldéhydes a été accomplie en utilisant un système catalytique simple Ni(OAc)₂ 4H2O/PCy₃ avec le PMHS, silane peu coûteux et stable en tant que source d'hydrure. L'amination réductrice d'aldéhydes avec des amines a également été réalisée avec le même système catalytique et le TMDS, comme silane. Deuxièmement, l’efficacité des complexes de manganèse demi-sandwich CpMn(CO)₂(IMes) a été prouvée pour la réduction des aldéhydes et des cétones en présence de Ph₂SiH₂ (1,5 équiv.) sous irradiation UV. La transformation difficile d'acides carboxyliques en aldéhydes a été effectuée à l'aide de Mn₂(CO)₁₀ et de Et3SiH. Troisièmement, la méthylation des amines secondaires avec le carbonate de diméthyle en tant que source C1 a été démontrée dans des conditions catalytique douces avec [CpFe(CO)₂(IMes)]I. Ensuite, l'hydroboration d'alcènes et d'alcynes fonctionnalisés a été réalisée en présence d’un complexe de fer (0), Fe(CO)₄(IMes) sous irradiation UV. Enfin, la réaction d'hydroboration a été étendue avec succès à la réduction de CO₂ en methoxyboranes avec Fe(CO)₃[P(OPh)₃]₂ en tant que catalyseur et les diverses sources de borane, tels que HBpin, HBcat ou 9-BBN. / This research work deals with the use of the catalysts based on the earth-abundant transition metals of the first row of the periodic table, such as Mn, Fe, and Ni, for hydroelementation reactions. First of all, the hydrosilylation of aldehydes and ketones was accomplished using a simple Ni(OAc)₂ 4H₂O/PCy₃ catalytic system with the inexpensive and stable silane PMHS as the hydride source. The reductive amination of aldehydes with amines was also achieved with the same catalytic system and TMDS, as the silane. Second, the efficiency of manganese half-sandwich complex CpMn(CO)₂(IMes) was exemplified for the reduction of aldehydes and ketones in the presence of Ph ₂ SiH ₂ (1.5 equiv.) under UV irradiation at room temperature. Still with manganese, the challenging transformation of carboxylic acids to aldehydes was performed using commercial Mn₂ (CO)₁₀ and Et₃SiH. Third, the methylation of the secondary amines with dimethyl carbonate as an alternative and safe C1 source was demonstrated under mild conditions with [CpFe(CO)₂(IMes)]I as the catalyst. Then, the hydroboration of functionalized alkenes and alkynes was catalyzed by an iron(0) carbonyl complex Fe(CO)₄(IMes) under UV irradiation. Finally, the hydroboration reaction was successfully extended to the reduction of CO₂ to methoxyboranes with Fe(CO)₃[P(OPh)₃]₂ as the catalyst and the borane sources, such as HBpin, HBcat or 9-BBN.
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Mitochondrie jako cíl protinádorové terapie. / Mitochondria as a target of anticancer therapy.Dvořák, Aleš January 2017 (has links)
Mitochondrial isocitrate dehydrogenase 2 (IDH2) catalyzes reductive carboxylation (RC, reverse Krebs cycle pathway) and 2HG synthesis (2HG) - metabolite of which many scientists are interested. 2HG may be concurrently synthetized in cytosol by IDH1. RC is involved in anabolic reactions necessary for cell proliferation - produces citrate, fatty acid precursor - especially in hypoxia. IDH2 and IDH1 are not the only enzymes that are involved in 2HG synthesis. Recently, several enzymes, which participate in 2HG production, have been discovered. 2HG is useful in cancer diagnostics due to its overproduction by transformed cells. Moreover, 2HG may cause epigenetic changes via inhibition of 2-oxoglutarate dependent dioxygenase. In this work, the importance of RC and 2HG synthesis in cancer and healthy cells was investigated by gas chromatography with mass spectrometry detection as well as IDH2 influence. We found that IDH2 significantly participates in reverse RC and 2HG synthesis in breast cancer cell lines and uses glutaminolysis as a supplementary anaplerotic pathway. RC is increased by hypoxia, inhibition of respiration, and decreased by activation of respiration or hypocapnia. We confirmed 2HG synthesis and RC in healthy cells (fibroblasts, breast epithelial cells etc.) as well as in cancer cells....
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Kan livscykelanalyser bistå riskvärderingen vid val av åtgärdsmetod? : En fallstudie vid ett område förorenat med klorerade lösningsmedel / Is it possible for life cycle analyzes to assist the risk assessment when choosing a remediation method? : A case study at a site contaminated with chlorinated solventsBjörnsdotter, Regina January 2021 (has links)
Hur kan livscykelanalyser bistå riskvärderingen vid val av åtgärdsmetod? I det här examensarbetet undersöktes hur resultaten från livscykelanalyser kan användas i beslutstödsverktyget SAMLA för förorenade områden för att bistå val av åtgärdsmetod vid Finspångs centraltvätt. Examensarbetet har genomförts i samarbete med Structor Miljö Öst AB. Livscykelanalyser har utförts för två olika typer av åtgärdsmetoder in situ, stimulerad anaerob reduktiv deklorering samt elektrisk konduktiv uppvärmning. Tidigare studier har visat att olika livscykelanalysmetoder ger olika resultat. Även den här studien bekräftar det. Därför bör inte resultat från olika metoder jämföras. Livscykelanalyser kompletterar SAMLA för förorenade områden väl. De procentuella förhållandena beräknades mellan åtgärdsmetodernas miljö- och klimatpåverkan. I värderingssteget i SAMLA bedöms åtgärdsalternativens påverkan i jämförelse med nollalternativet. En bedömning gjordes av respektive åtgärdsalternativ och korrigering av förhållandet mellan metoderna utfördes genom att samma procentuella förhållande som beräknats fram för miljöbelastningen respektive klimatpåverkan beräknades för värderingspoängen. Med stöd av livscykelanalyser samt riskvärdering bör efterbehandlingsmetoden stimulerad anaerob reduktiv deklorering väljas för Finspångs centraltvätt. / How can life cycle analyzes assist the risk assessment when choosing a remediation method? In this thesis, it was investigated how the results from life cycle analyzes can be used in the decision support tool SAMLA for contaminated sites to assist in the choice of remediation method at Finspång's Centraltvätt. The thesis has been carried out in collaboration with Structor Miljö Öst AB. Life cycle analyzes have been performed for two different types of in situ remediation methods, Enhanced Reductive Dechlorination and Electrical Conductive Heating. Previous studies have shown that different life cycle analysis methods lead to different results. This study also confirms this. Therefore, results from different methods should not be compared. Life cycle analyzes complement SAMLA for contaminated sites. The percentage ratios were calculated between the remediation methods' environmental and climate impact. In the valuation step in SAMLA, the impact of the remediation alternatives is assessed in comparison with the no action alternative. An assessment was made of the respectively remediation alternatives and a correction of the relationship between the methods was performed by calculating the same percentage ratio that was calculated for the valuation points of the environmental and climate impact. With the support of the life cycle analysis and the risk assessment the remediation method Enhanced Reductive Dechlorination should be chosen for Finspång's Centraltvätt.
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Sur les sous-groupes profinis des groupes algébriques linéaires / On profinite subgroups of algebraic groupsLoisel, Benoit 11 July 2017 (has links)
Dans cette thèse, nous nous intéressons aux sous-groupes profinis et pro-p d'un groupe algébrique linéaire connexe défini sur un corps local. Dans le premier chapitre, on résume brièvement la théorie de Bruhat-Tits et on introduit les notations nécessaires à ce travail. Dans le second chapitre, on trouve des conditions équivalentes à l'existence de sous-groupes compacts maximaux d'un groupe algébrique linéaire G connexe quelconque défini sur un corps local K. Dans le troisième chapitre, on obtient un théorème de conjugaison des sous-groupes pro-p maximaux de G(K) lorsque G est réductif. On décrit ces sous-groupes, de plus en plus précisément, en supposant successivement que G est semi-simple, puis simplement connexe, puis quasi-déployé. Dans le quatrième chapitre, on s'intéresse aux présentations d'un sous-groupe pro-p maximal du groupe des points rationnels d'un groupe algébrique G semi-simple simplement connexe quasi-déployé défini sur un corps local K. Plus spécifiquement, on calcule le nombre minimal de générateurs topologiques d'un sous-groupe pro-p maximal. On obtient une formule linéaire en le rang d'un certain système de racines, qui dépend de la ramification de l'extension minimale L=K déployant G, explicitant ainsi les contributions de la théorie de Lie et de l'arithmétique du corps de base. / In this thesis, we are interested in the profinite and pro-p subgroups of a connected linear algebraic group defined over a local field. In the first chapter, we briefly summarize the Bruhat-Tits theory and introduce the notations necessary for this work. In the second chapter we find conditions equivalent to the existence of maximal compact subgroups of any connected linear algebraic group G defined over a local field K. In the third chapter, we obtain a conjugacy theorem of the maximal pro-p subgroups of G(K) when G is reductive. We describe these subgroups, more and more precisely, assuming successively that G is semi-simple, then simply connected, then quasi-split in addition. In the fourth chapter, we are interested in the pro-p presentations of a maximal pro-p subgroup of the group of rational points of a quasi-split semi-simple algebraic group G defined over a local field K. More specifically, we compute the minimum number of generators of a maximal pro-p subgroup. We obtain a formula which is linear in the rank of a certain root system, which depends on the ramification of the minimal extension L=K which splits G, thus making explicit the contributions of the Lie theory and of the arithmetic of the base field.
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Progrès vers la synthèse totale de la calyciphylline BLy, Vu Linh 12 1900 (has links)
Les alcaloïdes Daphniphyllum constituent une vaste famille de produits naturels isolés à partir de plantes à feuillage persistant couramment utilisés dans la médecine chinoise traditionnelle. Ils affichent une gamme impressionnante d'activités biologiques; antipyrétique, anti-inflammatoire, antioxydant et même anticancéreux. La calyciphylline B appartient à cette famille et possède un motif original comprenant sept stéréocentres adjacents, dont un stéréocentre quaternaire tout carbone, avec un échafaudage hexacyclique. Sa structure a été déterminée par données spectroscopiques, plus précisément par des techniques de RMN 2D. Malgré le peu d'information sur son activité biologique, sa synthèse représente sans le moindre doute un grand défi pour les chimistes organiciens. Le groupe de recherche du Prof. Hanessian a entrepris la synthèse totale de la calyciphylline B en 2010, laquelle est toujours en cours.
Une nouvelle approche a été développée pour la préparation d'un intermédiaire azabicyclo[3.3.0]octane avancé. Ce mémoire résume les travaux de recherche de l'auteur sur les progrès réalisés pour la voie alternative élaborée par le groupe du prof. Hanessian. Le travail effectué comprend la formation d'un stéréocentre quaternaire, l'alkylation d'un énolate sur un triflate d'alkyle secondaire, une réduction diastéréosélective, une cyclisation réductrice ainsi qu'une oxydation de Wacker régiosélective. / The Daphniphyllum alkaloids constitute a broad class of natural products isolated from a genus of evergreen plants extensively used in traditional Chinese medicine. These alkaloids display an impressive range of biological activities, including antipyretic, anti-inflammatory, antioxidant, and even anticancer properties. Calyciphylline B is a structurally unique member of this family containing seven contiguous stereocenters including an all-carbon quaternary stereocenter with a fused-hexacyclic ring scaffold. Its structure was determined by spectroscopic methods, especially 2D NMR techniques. Despite the sparse availability of information on its biological activity, its synthesis is undoubtedly a great challenge for synthetic chemists. The research group of Prof. Hanessian embarked on the total synthesis of calyciphylline B in 2010 and the project is still ongoing.
A new route was developed for the preparation of an advanced azabicyclo[3.3.0]octane intermediate. This thesis summarizes the research work of the author on the progress made for the synthetic route developed by the Hanessian group. The work done includes the formation of a quaternary stereocenter, alkylation of an enolate using a secondary alkyl triflate, diastereoselective reduction, reductive cyclization, and a regioselective Wacker oxidation.
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Synthesis of constrained tricyclic nucleosides and the core of nagilactone BGiacometti, Robert 08 1900 (has links)
Cette thèse décrit deux thèmes principaux: 1) la conception, la synthèse, et l'évaluation biophysique des nucléosides tricycliques, et 2) la synthèse de nagilactone B, un produit naturel norditerpenoïde dilactone de la famille de produits naturels “podolactone”.
Le premier chapitre décrit la stratégie de design rationnel des nucléosides nommé “restriction conformationnelle double” basée sur les études de modélisation structurales des duplex ADN–ARN modifiés. Cette stratégie implique un blocage du cycle furanose dans une configuration de type N- ou S, et une restriction de la rotation torsionelle autour de l’angle γ. La première contrainte a été incorporée avec un pont méthylène entre l’oxygène en position 2′ et le carbone 4′ du nucléoside. Cette stratégie a été inspirée par les acides nucléiques bloqués (ou “locked nucleic acid”, LNA). La deuxième contrainte a été réalisée en ajoutant un carbocycle supplémentaire dans l'échafaud de l’acide nucléique bloqué. Les défis synthétiques de la formation des nucléotides modifiés à partir des carbohydrates sont décrits ainsi que les améliorations aux stabilités thermiques qu’ils apportent aux duplex oligonucléïques dont ils font partie.
Chapitres deux et trois décrivent le développement de deux voies synthétiques complémentaires pour la formation du noyau de nagilactone B. Ce produit naturel a des implications pour le syndrome de Hutchinson–Gilford, à cause de son habilité de jouer le rôle de modulateur de l’épissage d’ARN pré-messager de lamine A. Ce produit naturel contient sept stereocentres différents, dont deux quaternaires et deux comprenant un syn-1,2-diol, ainsi que des lactones à cinq ou six membres, où le cycle à six ressemble à un groupement α-pyrone. La synthèse a débuté avec la cétone de Wieland-Miescher qui a permis d’adresser les défis structurels ainsi qu’explorer les fonctionnalisations des cycles A, B et D du noyau de nagilactone B. / The present thesis comprises two major themes: 1) the design, synthesis, and biophysical evaluation of conformationally restricted tricyclic nucleosides for antisense applications, and 2) strategic approaches for synthesizing the core of nagilactone B, a norditerpenoid dilactone from the podolactone family of natural products.
Guided by structural studies of modified DNA–RNA duplexes, Chapter One focuses on a proposed dual-conformational-restriction strategy, in which two modes of conformational restriction are incorporated into a single nucleotide modification: 1) locking the furanose ring in an N- or S-type configuration and 2) restricting rotation around backbone torsion angle γ. The first constraint was incorporated by way of a 2′,4′-anhydro bridge that is found in the scaffold of locked nucleic acid (LNA), while the second was realized by annealing an additional carbocyclic ring to the modified nucleoside. The synthetic challenges associated with preparing these highly constrained molecules from carbohydrate-derived starting materials are described, in addition to the corresponding improvements in duplex thermal stability they provide to oligonucleotide sequences containing them.
Chapters Two and Three describe complementary approaches for the synthesis of the core of nagilactone B, a natural product with implications for Hutchinson–Gilford progeria syndrome, as a consequence of its ability to act as a modulator of splicing events leading to lamin A. This natural product contains seven stereogenic centers overall, including a syn-1,2-diol moiety, a γ-lactone, and a pair of quaternary stereocenters, which are complemented by the presence of an α-pyrone moiety. To address the synthesis of these structural features, the utility of the Wieland–Miescher ketone was explored with an emphasis on synthesizing rings A, B, and D of the core of nagilactone B.
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Complexes NCN de Ni(II) et Ni(III) : synthèse, caractérisation et rôle dans le mécanisme de couplage C-O, C-N et C-halogènesCloutier, Jean-Philippe 09 1900 (has links)
No description available.
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Influência dos nutrientes nitrogênio e fósforo na degradação anaeróbia do pentaclorofenol e na diversidade microbiana dos sedimentos enriquecidos do Estuário de Santos-São Vicente, Estado de São Paulo / Influence of nitrogen and phosphorus nutrients on the anaerobic degradation of pentachlorophenol and on the natural microbial diversity of sediments from the Santos-São Vicente estuary, state of São Paulo, BrazilBrucha, Gunther 01 October 2007 (has links)
A pesquisa que ora se apresenta visou estabelecer as condições nutricionais adequadas para o uso do sedimento do estuário de Santos - São Vicente do Estado de São Paulo, como inóculo no reator anaeróbio horizontal de leito fixo (RAHLF) no processo de degradação anaeróbia do pentaclorofenol (PCP) em busca da aplicação da tecnologia em escala real, assim como identificar grupos microbianos envolvidos no processo. Para tanto, sedimento do estuário de Santos-São Vicente, com características metanogênicas foi utilizado. Os microrganismos provenientes do sedimento estuarino foram enriquecidos sob condições metanogênicas e halofílicas, visando a utilização do sedimento como inoculo nos ensaios nutricionais e na operação dos reatores do tipo RAHLF. O meio de cultivo salino Biota, suplementado com glicose e formiato, foi utilizado para o desenvolvimento da comunidade microbiana metanogênica halofílica. Testes de degradação do PCP foram realizados previamente sob diferentes concentrações de nitrogênio e fósforo, com vistas a uma melhor compreensão da relação N:P adequada para o processo anaeróbio. Os resultados provenientes do acompanhamento da diversidade microbiana do domínio Bacteria nas diferentes relações testadas indicaram a seleção de distintas comunidades microbianas, resultando em diferentes velocidades de degradação do PCP. A relação N:P de 10:1 foi a que apresentou melhores resultados, pois além da rápida degradação do PCP quando comparada com as outras relações, apresentou a maior diversidade de microrganismos. Posteriormente, o sistema RAHLF foi operado com vazão média afluente de aproximadamente 44 mL/hora, com meio mineral salino Biota (DQO:N:P de 1000:130:45) para R1 e com a alteração para relação DQO:N:P de 1000:10:1 para R2. Duas diferentes estratégias foram adotadas para partida dos reatores. Para R1, optou-se por acrescentar PCP na concentração inicial de 10,0 mg/L, durante 110 dias causando desestabilização da metanogênese e acúmulo de PCP, requerendo intervenção para recuperação do reator pelo período de 90 dias. Na partida do RAHLF 2, optou-se pelo aumento gradual de concentração do PCP de 0,5 mg/L a 12,0 mg/L durante 52 dias. Após estabelecimento da metanogêsenese, R1 foi alimentado durante 270 dias com 5,0 mg PCP/L, durante 41 dias com 8,0 mg/L e 59 dias com 12 mg/L. O balanço de massa no reator RAHLF 1 demonstrou que 0,52% do PCP adicionado saiu no efluente e que não ocorreu adsorção no sistema. 22,34 mg de 2,4,6 TCP, intermediário da degradação do PCP, ficaram adsorvidos na biopartícula. Os resultados das análises de diversidade microbiana apontaram para mudança da comunidade microbiana do domínio Bacteria ao longo do período operacional e morfologias de bacilos fluorescentes semelhantes a Methanobacterium sp estiveram presentes no reator. No RAHLF 2, a degradação do PCP foi de 100%, até a concentração de 10,0 mg/L. No final da fase com 12,0 mg PCP/L, a concentração no efluente foi de 1,4 mg PCP/L, com eficiência média de remoção de 93,2 \'+ ou -\' 5,5%. 2,4,6 TCP foi o intermediário principal no efluente do reator. 4,06% do PCP adicionado ao sistema foram encontradas no efluente e 15,94% ficaram adsorvidas nas biopartículas do reator. Portanto, considera-se que 80% do PCP adicionado sofreu degradação anaeróbia microbiana. A presença dos microrganismos Methanocalcullus e Methanosaeta na fase final de operação do RAHLF 2 e determinadas no sedimento coletado foi considerada fundamental para manter estabilidade do reator. Essa descoberta contribui com informações sobre a real diversidade microbiana de ecossistemas tropicais, sobretudo em habitats anaeróbios, bem como sobre as condições nutricionais e os procedimentos necessários para confiná-la em reatores e usá-la em processos de biorremediação. / The research presented here aimed to determine the optimal nutritional conditions for the use of sediment from the Santos-São Vicente estuary in the state of São Paulo, Brazil, as an inoculum for a horizontal-flow anaerobic immobilized biomass reactor (HAIB) applied to the anaerobic degradation of pentachlorophenol (PCP), seeking to apply the technology on the real scale and to identify the microbial groups involved in the process. To this end, sediment with methanogenic characteristics from the Santos-São Vicente estuary was used. The microorganisms from the estuarine sediment were enriched under methanogenic and halophilic conditions, aiming to use the sediment as an inoculum in nutritional assays and in the operation of HAIB reactors. Biota saline culture medium supplemented with glucose and formiate was used to develop the halophilic methanogenic microbial community. PCP degradation tests were carried out previously under different concentrations of nitrogen and phosphorus in order to gain a better understanding of the optimal N:P ratio for the anaerobic process. The findings on the microbial diversity of the domain Bacteria at the various ratios tested here indicated the selection of distinct microbial communities, resulting in different PCP degradation velocities. The N:P ratio utilized was 10:1 since it presented the best results not only in terms of faster PCP degradation than the other ratios but also highest diversity of microorganisms. The HAIB reactor was then operated with a mean inflow of approximately 44 mL/hour, using the biota saline mineral medium with a COD:N:P ratio of 1000:130:45 in R1 (reactor 1) and a COD:N:P ratio of 1000:10:1 in R2. Two distinct strategies were adopted to start up the reactors. In R1 PCP was added at an initial concentration of 10.0 mg/L for 100 days, causing destabilization of the methanogenesis and accumulation of PCP, requiring a 90-day intervention for the reactor\'s recovery. To start up R2, the PCP concentration was increased gradually from 0.5 mg/L to 12.0 mg/L for 52 days. After methanogenesis was established, R1 was fed for 270 days with 5.0 mg of PCP/L, followed by 41 days with 8.0 mg/L and 59 days with 12 mg/L. The mass balance in R1 indicated that 0.52% of the added PCP exited through the reactor\'s outflow and that adsorption of the system did not occur. 22.34 mg of 2,4,6 TCP, an intermediary of PCP degradation, was adsorbed in the bioparticles. The results of the analysis of microbial diversity indicated a change in the microbial community of the domain Bacteria along the operational period, with fluorescent bacilli morphologies resembling Methanobacterium sp present in the reactor. PCP degradation in R2 was 100% up to a concentration of 10.0 mg/L. At the end of the phase with 12.0 mg PCP/L, the effluent concentration was 1.4 mg PCP/L, with a mean removal efficiency of 93.2 \'+ or -\' 5,5%. 2,4,6 TCP was the main intermediary in the reactor\'s effluent. 4.06% of the PCP added to the system was found in the effluent and 15.94% was absorbed in the bioparticles of the reactor. Therefore, it was concluded that 80% of the added PCP underwent microbial anaerobic degradation. The presence of Methanocalcullus and Methanosaeta microorganisms in the final operating phase of R2, which was determined in the collected sediment, was considered fundamental for maintaining the reactor\'s stability. This discovery contributes to the body of information about the real microbial diversity of tropical ecosystems, above all in anaerobic habitats, and about the nutritional conditions and procedures involved in confining these microorganisms in reactors and using them in bioremediation processes.
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Insights into the ATP-dependent reductive activation of the Corrinoid/Iron-Sulfur Protein of Carboxydothermus hydrogenoformansHennig, Sandra Elisabeth 19 June 2014 (has links)
Die Verknüpfung einer exergonischen mit einer endergonischen Reaktion zur Ermöglichung der letzteren ist eine in biologischen Systemen weit verbreitete Strategie. Energetisch benachteiligte Elektronenübertragungsreaktionen im Rahmen der reduktiven Aktivierung von Nitrogenasen, Radikal-abhängigen β,α-Dehydratasen, der zu diesen verwandten Benzoyl-CoA-Reduktasen und diversen Cobalamin-abhängigen Methyltransferasen sind gekoppelt an die Hydrolyse von ATP. Der Methylgruppentransfer des reduktiven Acetyl-CoA-Weges von Carboxydothermus hydrogenoformans erfordert den Co(I)-Zustand des Corrinoid/Eisen-Schwefel Proteins (CoFeSP). Um diese superreduzierte Form nach einer oxidativen Inaktivierung zu regenerieren ist ein „Reparaturmechanismus“ erforderlich. Ein offenes Leseraster (orf7), welches möglicherweise für eine reduktive Aktivase von Corrinoid Enzymen (RACE) kodiert, wurde in dem Gencluster der am reduktiven Acetyl-CoA-Weg beteiligten Proteine entdeckt. Im Rahmen dieser Arbeit wurde dieses potenzielle RACE Protein biochemisch und strukturell charakterisiert und die ATP-abhängige reduktive Aktivierung von CoFeSP untersucht. Auf Grundlage der in dieser Arbeit gewonnenen Ergebnisse wurde ein Mechanismus für die ATP-abhängige Aktivierung entworfen. Dieser gibt Einblicke wie die durch ATP-Hydrolyse bereitgestellte Energie einen energetisch ungünstigen Elektronentransfer ermöglichen kann. Hierzu kombiniert RACo das Ausgleichen von Bindungsenergien mit Modulationen am Elektronenakzeptor. Eine vergleichbare Strategie wurde bisher in keinem anderen ATP-abhängigen Elektronenübertragungssystem wie dem von Nitrogenasen, Radikal-abhängigen β,α-Dehydratasen oder Benzoyl-CoA-Reduktasen beobachtet und könnte ein für RACE Proteine allgemein gültige Eigenschaft darstellen. / The principle of coupling an exergonic to an endergonic reaction to enable the latter is a widespread strategy in biological systems. Unfavoured electron transfer reactions in the reductive activation of nitrogenases, radical-dependent β,α-dehydratases and the related benzoyl- CoA reductases, as well as different cobalamin-dependent methyltransferases are coupled to the hydrolysis of ATP. The reductive acetyl-CoA pathway of Carboxydothermus hydrogenoformans relies on the superreduced Co(I)-state of the corrinoid/iron-sulfur protein (CoFeSP) that requires a “repair mechanism” in case of incidental oxidation. An open reading frame (orf7) coding for a putative reductive activase of corrinoid enzymes (RACE) was discovered in the gene cluster of proteins involved in the reductive acetyl-CoA pathway. In this work, this putative RACE protein was biochemically and structurally characterised and the ATP-dependent reductive activation of CoFeSP was investigated. Based on the results of this study, a mechanism for the ATP-dependent reactivation of CoFeSP was deduced providing insights into how the energy provided by ATP could trigger this unfavourable electron transfer. The reductive activator of CoFeSP combines balance of binding energies and modulations of the electron acceptor to promote the uphill electron transfer to CoFeSP. A comparable strategy has not been observed in other ATP-dependent electron transfer systems like nitrogenases, radical-dependent β,α-dehydratases and benzoyl- CoA reductases and could be a universal feature of RACE proteins.
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